HIDE SNP NAMES

The Big Tree: R-FGC13899

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > Z251/S470 > FGC13899

FGC13899 Y7624
FGC18229
FGC18232
A228
A232
A240
A242
A244
A245
A246
A247
A248
A249
A250
A251
A252
A253
A255
A256
A257
Z17666
22715638-GA-G
A258
A238
A958
FGC18232?
FGC18233?
A241
A243
A254
A231 ZS2741
FGC13933
CTS9686
24958848-T-C
A237
8055923-TTA-T
FGC13916
M6346
A239
A233
A229
A230
A234
A975
8991479-A-AT
BY42897
A976
A977
A978
A10118
14749988-T-TA
Y30421
BY19991
BY19992
A17283
A551
BY3980
A545
A546
A547
A548
A458
A552
A553
A554
Y52963
BY32708
BY32709
BY32710
BY32711
BY32712
BY32713
BY32714
BY32715
BY32716
BY32717
BY32718
BY32721
Y5253
24492776-TG-T
BY27610
BY27611
BY27612
BY49909
15787651-GA-G
BY49983
BY49986
BY50042
Y57981
BY50123
BY50136
A959
A969
A968
A967
BY118
A960
A961
A964
A965
A972
A973
Y41471
BY19356
BY19355
BY19357
BY19358
BY19359
FGC73622
FGC73626
FGC73627
A1772
6169674-G-A
A17480
A17481
A17483
A17482
22449881-G-T
FGC18233
25042060-A-G
FGC18235
FGC18240
FGC18230 Z37220
FGC18246
FGC18247
FGC18248
FGC18249
FGC18251
FGC18253
FGC18254
BY43344
FGC18256
FGC18258
FGC18259
FGC18260
FGC62375
FGC18265
FGC18268
FGC18269
FGC18271
FGC18272
FGC18274
FGC18276
BY24442
FGC18262
FGC18267
FGC18234
FGC18255
14708427-AAT-A
Y28752
BY51870
BY39094
BY39095
8677296-T-TC
BY39096
BY39097
BY39098
Y91373
BY39099
BY39100
BY39101
BY39102
BY39103
18953111-AT-A
BY39104
BY39105
BY39106
BY133903
BY39107
22440865-C-A
BY39109
BY39110
BY39111
BY2914
BY2920
BY2963
BY2964 BY23749
A7790 BY2973
A7791 BY2975
BY2982
FGC23554 Y6204
BY2983
BY2986
BY2995
BY24061
BY3003
BY3012
BY3014
BY3016
BY3034
BY3054
BY3067
BY3090
A17598 BY20603
BY20604 A17599
14064671-CTG-C
A17600 BY20605
A17601 BY20606
Y22839
BY24064
BY24065
BY20607
BY20608
BY20609
BY20610
BY24650
BY20611
22773861-GC-G
BY20612
BY20613
BY20614
Pierce
N10900 N10900
Johnson
305279
Roberts
N44578
Ogden
495832
McMillin
444238
Haas
B78109
Simmons
444782
Simmons
526173 526173
Simmons
N115803
Simmons
153336
Baker
141431
Richards
79421
Davis
117909
Truitt
253275
Rice
134428
Dyess
98554
Dyess
786108
Evans
346071
Rush
B161261
Davis
264132
Davies
69252
Wright
541597
Neale
H2113
Davies
266546
Davis
83749
Rodgers
955 955
Rogers
LUZ7X
Thomas
561751
Davies
289184
Williams
27936
Jones
451349
Smalley
132484
Green
N82424 N82424
unknown
678160
Godwin
139697 0ANEE
Godwin
728787
Renfroe
384581
Price
9452
Courtney
692859
Cole
283647
Law
48048
Stapleton
214154
Dorr
N112316
Castle
189806
1k Genomes
NA11831
Cook
297627 1588
Culbreth
422973
Welch
489147
Sanchez
171804
Scott
442280
Pettis
B210885
Eastaughffe
B240662
Goddard
77703
Wible
683812

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

A242
FGC18232?
A red SNP name with a '?' indicates that the SNP's status for the block is uncertain, but assumed to be negative. The same SNP probably occurs in a parallel block. It will be necessary to check BAM files or perhaps Sanger sequence some men to prove the result.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.