Lopez

BigY3: B200842
MDKA Birth: Mexico

Tree Position

R-M269 > L23 > Z2103 > Z2106 > Z2108 > Z2110 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY3
B200842
hg19:Y:22242158-G-A hg38:Y:20080272-G-A DYZ19 A+
hg19:Y:20774922-G-GA hg38:Y:18613036-G-GA P4_Prx 22×AA*
hg19:Y:58980455-T-C hg38:Y:56834308-T-C A*
hg19:Y:28817453-C-T hg38:Y:26671306-C-T A*
hg19:Y:20917254-C-CA hg38:Y:18755368-C-CA P4_Dst 14×AA*
hg19:Y:20247747-C-CA hg38:Y:18085861-C-CA P5_Dst 10×AA*
hg38:Y:10794243-C-T A*
hg19:Y:13487822-A-G hg38:Y:11332146-A-G A*
hg38:Y:10767801-A-C A*
hg38:Y:10767797-C-T A*
hg38:Y:10767800-A-C A*
hg38:Y:10767803-T-C A*
hg38:Y:56831622-T-C A*
hg38:Y:56833517-A-T A*
hg19:Y:22314207-G-T hg38:Y:20152321-G-T DYZ19 A*
hg38:Y:56834147-C-T A*
hg38:Y:56832598-C-T A*
hg19:Y:6228574-T-A hg38:Y:6360533-T-A IR3_Dst A*
hg19:Y:19655203-A-G hg38:Y:17543323-A-G P5_Prx A*
hg19:Y:19772026-C-T hg38:Y:17660146-C-T P5_Prx A*
hg19:Y:25965031-A-T hg38:Y:23818884-A-T BY209173 P1_Y1 A*
hg19:Y:26045486-A-C hg38:Y:23899339-A-C P1_Y1 A*
hg19:Y:26089227-T-TAAGAA hg38:Y:23943080-T-TAAGAA P1_Y1 A*
hg19:Y:26418245-A-G hg38:Y:24272098-A-G P1_Y1 A*
hg19:Y:26519786-G-A hg38:Y:24373639-G-A P1_Y1 A*
hg19:Y:28817227-A-T hg38:Y:26671080-A-T A*
hg19:Y:14852779-T-A hg38:Y:12740845-T-A BY11189 YY+
hg19:Y:7850298-A-C hg38:Y:7982257-A-C BY19950S10738 YY+
hg19:Y:18096080-G-A hg38:Y:15984200-G-A Z16472 YY+
hg19:Y:21219817-C-A hg38:Y:19057931-C-A BY208161 YY+
hg19:Y:26334826-C-T hg38:Y:24188679-C-T FGC52814 P1_Y1 +
hg19:Y:2695769-A-G hg38:Y:2827728-A-G YY+
hg19:Y:2732839-T-C hg38:Y:2864798-T-C FT60489 YY+
hg19:Y:2862761-G-T hg38:Y:2994720-G-T FT60497 YY+
hg19:Y:3636759-C-G hg38:Y:3768718-C-G FT15507 +
hg19:Y:4173678-C-T hg38:Y:4305637-C-T FT16159 +
hg19:Y:4191567-C-G hg38:Y:4323526-C-G FT27921 +
hg19:Y:4193513-C-T hg38:Y:4325472-C-T FT16187 +
hg19:Y:4661189-G-T hg38:Y:4793148-G-T FT16722 +
hg19:Y:4661190-A-G hg38:Y:4793149-A-G FT16723 +
hg19:Y:4780352-G-A hg38:Y:4912311-G-A FT60778 +
hg19:Y:5431037-T-C hg38:Y:5562996-T-C FT60863 +
hg19:Y:5553618-GTTATC-G hg38:Y:5685577-GTTATC-G +
hg19:Y:5733626-CTTTT-C hg38:Y:5865585-CTTTT-C +
hg19:Y:6141131-G-A hg38:Y:6273090-G-A BY59231 IR3_Dst +
hg19:Y:6961878-C-T hg38:Y:7093837-C-T FT61067 YY+
hg19:Y:7083290-G-A hg38:Y:7215249-G-A YY+
hg19:Y:7193627-G-A hg38:Y:7325586-G-A YY+
hg19:Y:7417006-G-A hg38:Y:7548965-G-A YY+
hg19:Y:7880817-C-T hg38:Y:8012776-C-T FT61156 YY+
hg19:Y:7990064-G-A hg38:Y:8122023-G-A FT61168 YY+
hg19:Y:8106092-G-A hg38:Y:8238051-G-A YY+
hg19:Y:8107990-C-T hg38:Y:8239949-C-T YY+
hg19:Y:8273199-C-T hg38:Y:8405158-C-T FT61196 YY+
hg19:Y:8358452-G-C hg38:Y:8490411-G-C FT61203 YY+
hg19:Y:8577771-G-A hg38:Y:8709730-G-A FGC47254 YY+
hg19:Y:8984459-T-C hg38:Y:9146850-T-C FT61264 +
hg19:Y:9092220-G-A hg38:Y:9254611-G-A FT61276 Y+
hg19:Y:9898952-G-A hg38:Y:10061343-G-A Y+
hg38:Y:10665180-A-G FT91503 +
hg38:Y:10684555-GTCCATTCCATTCCAT-G +
hg38:Y:10760500-G-A FT430005 +
hg38:Y:10892091-C-T FT435696 +
hg19:Y:14096487-C-T hg38:Y:11975781-C-T YY+
hg19:Y:14124949-G-A hg38:Y:12004243-G-A YY+
hg19:Y:14917570-G-A hg38:Y:12805637-G-A BY98474 YY+
hg19:Y:14996318-G-A hg38:Y:12884403-G-A FT61489 YY+
hg19:Y:15655701-C-G hg38:Y:13543821-C-G FT61550 YY+
hg19:Y:15822306-A-G hg38:Y:13710426-A-G FT61586 YY+
hg19:Y:16250153-A-C hg38:Y:14138273-A-C FT61625 YY+
hg19:Y:16477707-C-T hg38:Y:14365827-C-T YY+
hg19:Y:17016357-G-A hg38:Y:14904477-G-A YY+
hg19:Y:17411361-C-T hg38:Y:15299481-C-T FT61772 YY+
hg19:Y:18018894-C-T hg38:Y:15907014-C-T Y+
hg19:Y:18673807-G-A hg38:Y:16561927-G-A FT24380 YY+
hg19:Y:18824929-T-C hg38:Y:16713049-T-C FT61917 YY+
hg19:Y:19317361-C-T hg38:Y:17205481-C-T FT61989 YY+
hg19:Y:21130800-G-A hg38:Y:18968914-G-A YY+
hg19:Y:22172959-G-A hg38:Y:20011073-G-A FT25945 Y+
hg19:Y:22612192-T-G hg38:Y:20450306-T-G YY+
hg19:Y:22651746-CTA-C hg38:Y:20489860-CTA-C +
hg19:Y:22990700-G-A hg38:Y:20828814-G-A FT26314 Y+
hg19:Y:23536183-A-G hg38:Y:21374297-A-G FT62248 YY+
hg19:Y:23607612-T-G hg38:Y:21445726-T-G YY+
hg19:Y:28463299-C-A hg38:Y:26317152-C-A +
hg19:Y:28500554-A-G hg38:Y:26354407-A-G BY150614 Y+
hg19:Y:28609941-A-G hg38:Y:26463794-A-G FT62308 Y+
hg19:Y:20931853-A-ATG hg38:Y:18769967-A-ATG P4_Dst 18×TG*
hg19:Y:22316966-T-C hg38:Y:20155080-T-C Y17629 DYZ19 *
hg19:Y:5862541-T-C hg38:Y:5994500-T-C *
hg19:Y:5862555-CAT-C hg38:Y:5994514-CAT-C *
hg19:Y:23966967-T-TTG hg38:Y:21820820-T-TTG 10×TG*
hg19:Y:28807115-C-T hg38:Y:26660968-C-T FT148754BY40553 *
hg19:Y:4997519-C-CAG hg38:Y:5129478-C-CAG 16×AG*
hg19:Y:17274955-TAGATAGAC-T,TAGATAGAT hg38:Y:15163075-TAGATAGAC-T,TAGATAGAT *
hg19:Y:28800095-T-TGA hg38:Y:26653948-T-TGA *
hg19:Y:14319448-GAT-G hg38:Y:12198742-GAT-G 8×AT**
hg19:Y:8169268-A-AT hg38:Y:8301227-A-AT 10×T**
hg19:Y:14016667-G-A hg38:Y:11895961-G-A FT12941 **
hg19:Y:28620205-A-C hg38:Y:26474058-A-C Z7975 **
hg19:Y:2697794-TA-T hg38:Y:2829753-TA-T 10×A**
hg38:Y:11022840-AT-A ***
hg19:Y:18890882-ATTT-A hg38:Y:16779002-ATTT-A 17×T**
hg19:Y:7201630-C-CT hg38:Y:7333589-C-CT 11×T**
hg19:Y:3240658-ATT-A hg38:Y:3372617-ATT-A 13×T**
hg19:Y:4890660-CAAAA-C hg38:Y:5022619-CAAAA-C 18×A**
hg19:Y:8172687-CTTTTT-C hg38:Y:8304646-CTTTTT-C 22×T**
hg19:Y:19199320-A-AT hg38:Y:17087440-A-AT 9×T**
hg19:Y:23572484-C-T hg38:Y:21410598-C-T BY9466 13×GT**
hg19:Y:4151420-T-C hg38:Y:4283379-T-C **
hg19:Y:4188898-A-C hg38:Y:4320857-A-C FT16178 **
hg19:Y:5491261-C-CAA hg38:Y:5623220-C-CAA 18×A**
hg19:Y:6936292-G-T hg38:Y:7068251-G-T **
hg19:Y:7305124-C-A hg38:Y:7437083-C-A **
hg19:Y:8822570-A-G hg38:Y:8954529-A-G **
hg19:Y:9716298-A-G hg38:Y:9878689-A-G IR3_Prx **
hg19:Y:10079211-T-C hg38:Y:10241602-T-C **
hg38:Y:10896417-C-T **
hg19:Y:13467348-T-C hg38:Y:11311672-T-C **
hg19:Y:13713650-T-A hg38:Y:11557974-T-A DYZ17 **
hg19:Y:13725144-A-G hg38:Y:11569468-A-G DYZ17 **
hg19:Y:17632788-C-T hg38:Y:15520908-C-T 3243302-C-T **
hg19:Y:18863991-A-G hg38:Y:16752111-A-G **
hg19:Y:19043595-C-A hg38:Y:16931715-C-A **
hg19:Y:19048386-T-G hg38:Y:16936506-T-G **
hg19:Y:19048388-T-G hg38:Y:16936508-T-G BY125785 **
hg19:Y:19128007-G-A hg38:Y:17016127-G-A FT181690 **
hg19:Y:19143253-T-C hg38:Y:17031373-T-C **
hg19:Y:22460843-T-G hg38:Y:20298957-T-G DYZ19 **
hg19:Y:22473666-C-G hg38:Y:20311780-C-G BY222964 DYZ19 **
hg19:Y:27701739-G-A hg38:Y:25555592-G-A P1_Y2 **
hg19:Y:28725510-T-G hg38:Y:26579363-T-G FT27308 **
hg19:Y:13868350-A-G hg38:Y:11747644-A-G DYZ17 ***
hg19:Y:13456303-C-G hg38:Y:11300627-C-G ***
hg19:Y:13446577-T-C hg38:Y:11290901-T-C ***
hg19:Y:13474059-G-A hg38:Y:11318383-G-A ***
hg19:Y:19206934-T-TTA hg38:Y:17095054-T-TTA 10×TA***
hg19:Y:13488831-C-T hg38:Y:11333155-C-T ***
hg19:Y:18672379-TTTTA-T hg38:Y:16560499-TTTTA-T 8×TTTA***
hg19:Y:18804474-AAGAGAGAGAG-A hg38:Y:16692594-AAGAGAGAGAG-A 26×AG***
hg19:Y:21343193-T-TG hg38:Y:19181307-T-TG 10×G***
hg19:Y:3301243-TTA-T hg38:Y:3433202-TTA-T 8×TA***
hg19:Y:5862533-T-G hg38:Y:5994492-T-G ***
hg19:Y:21068499-AAC-A hg38:Y:18906613-AAC-A ***
hg19:Y:21477223-CTTA-C hg38:Y:19315337-CTTA-C ***
hg19:Y:58974788-G-A hg38:Y:56828641-G-A ***
hg19:Y:59017779-AT-A hg38:Y:56871632-AT-A ***
hg19:Y:13349048-C-T hg38:Y:11193372-C-T FGC16807 ***
hg19:Y:14392761-GTC-G hg38:Y:12272057-GTC-G ***
hg19:Y:19138271-CAT-C hg38:Y:17026391-CAT-C ***
hg19:Y:6493953-C-CA hg38:Y:6625912-C-CA 19×A***
hg19:Y:16494317-A-AAT hg38:Y:14382437-A-AAT 11×AT***
hg19:Y:13470627-C-G hg38:Y:11314951-C-G ***
hg19:Y:13195525-C-A hg38:Y:11039849-C-A ***
hg19:Y:13349054-G-A hg38:Y:11193378-G-A ***
hg19:Y:14888076-CTT-C hg38:Y:12776142-CTT-C 17×T***
hg19:Y:15020595-AT-A hg38:Y:12908684-AT-A 8×T***
hg19:Y:13513143-A-AC hg38:Y:11357467-A-AC 9×C***
hg19:Y:5252833-ATT-A hg38:Y:5384792-ATT-A 16×T***
hg19:Y:4207957-CAAA-C hg38:Y:4339916-CAAA-C 22×A***
hg19:Y:13480284-G-A hg38:Y:11324608-G-A ***
hg19:Y:18861371-CT-C hg38:Y:16749491-CT-C 11×T***
hg19:Y:13478910-G-A hg38:Y:11323234-G-A ***
hg19:Y:15733879-CAAA-C hg38:Y:13621999-CAAA-C 25×A***
hg19:Y:13921125-CA-C hg38:Y:11800419-CA-C 10×A***
hg19:Y:13487828-A-T hg38:Y:11332152-A-T ***
hg19:Y:13705592-C-T hg38:Y:11549916-C-T DYZ17 ***
hg38:Y:10810562-A-G ***
hg38:Y:10772538-A-T ***
hg19:Y:13470029-A-T hg38:Y:11314353-A-T ***
hg19:Y:21468745-ATTT-A,ATT hg38:Y:19306859-ATTT-A,ATT 25×T***
hg38:Y:11002112-T-A ***
hg19:Y:22011557-CAAA-C hg38:Y:19849671-CAAA-C 21×A***
hg19:Y:14826548-GTTTT-G hg38:Y:12714615-GTTTT-G 19×T***
hg19:Y:28724174-ATTT-A hg38:Y:26578027-ATTT-A 20×T***
hg19:Y:13808742-A-AAGCAG hg38:Y:11688036-A-AAGCAG DYZ17 ***
hg19:Y:8468065-CAAAAAA-C hg38:Y:8600024-CAAAAAA-C 24×A***
hg19:Y:21146240-C-CT hg38:Y:18984354-C-CT 10×T***
hg38:Y:12869906-T-TTTCCTTCC 14×TTCC***
hg19:Y:18106353-G-GTT hg38:Y:15994473-G-GTT 15×T***
hg19:Y:14774253-CTTT-C hg38:Y:12662322-CTTT-C 28×T***
hg19:Y:13462154-A-C hg38:Y:11306478-A-C ***
hg19:Y:22587954-CA-C,CAA hg38:Y:20426068-CA-C,CAA 13×A***
hg19:Y:15848964-A-T hg38:Y:13737084-A-T ***
hg38:Y:10776541-C-G ***
hg19:Y:4937662-GT-G hg38:Y:5069621-GT-G 12×T***
hg19:Y:16309531-C-A hg38:Y:14197651-C-A ***
hg19:Y:13349045-T-G hg38:Y:11193369-T-G ***
hg19:Y:13349080-A-G hg38:Y:11193404-A-G ***
hg19:Y:13463091-GCC-G hg38:Y:11307415-GCC-G ***
hg19:Y:7758491-GTT-G hg38:Y:7890450-GTT-G 17×T***
hg19:Y:23231613-A-G hg38:Y:21069727-A-G ***
hg19:Y:4409081-A-ATT hg38:Y:4541040-A-ATT 12×T***
hg38:Y:10954280-G-GCATTC ***
hg19:Y:13453485-A-T hg38:Y:11297809-A-T ***
hg19:Y:21148503-C-A hg38:Y:18986617-C-A ***
hg19:Y:16471361-C-T hg38:Y:14359481-C-T FT143923 ***
hg19:Y:5177121-CAA-C hg38:Y:5309080-CAA-C 15×A***
hg19:Y:13465727-C-T hg38:Y:11310051-C-T ***
hg19:Y:13465731-G-C hg38:Y:11310055-G-C ***
hg19:Y:14510449-GAA-G,GA hg38:Y:12398654-GAA-G,GA 21×A***
hg19:Y:4897963-CAA-C,CA hg38:Y:5029922-CAA-C,CA 20×A***
hg38:Y:56869320-T-C ***
hg19:Y:13349064-A-T hg38:Y:11193388-A-T ***
hg19:Y:13349042-T-C hg38:Y:11193366-T-C ***
hg19:Y:13467296-T-A hg38:Y:11311620-T-A ***
hg19:Y:2698238-T-A hg38:Y:2830197-T-A ***
hg19:Y:3478355-CTTT-C,CTT hg38:Y:3610314-CTTT-C,CTT 14×T***
hg19:Y:3491077-G-A hg38:Y:3623036-G-A ***
hg19:Y:3910070-TAA-T hg38:Y:4042029-TAA-T 12×A***
hg19:Y:4123368-T-C hg38:Y:4255327-T-C ***
hg19:Y:5088909-A-G hg38:Y:5220868-A-G ***
hg19:Y:6046214-T-C hg38:Y:6178173-T-C ***
hg19:Y:7269610-CTTT-C,CTT hg38:Y:7401569-CTTT-C,CTT 22×T***
hg19:Y:7650599-G-A hg38:Y:7782558-G-A ***
hg19:Y:8281836-TA-T hg38:Y:8413795-TA-T ***
hg19:Y:9942043-ATT-A,ATTT hg38:Y:10104434-ATT-A,ATTT 28×T***
hg38:Y:10956561-CTCCATTCCATTCCATTCCATTCCAT-C,CTCCATTCCATTCCATTCCAT ***
hg19:Y:13374326-A-G hg38:Y:11218650-A-G ***
hg19:Y:13420790-C-G hg38:Y:11265114-C-G ***
hg19:Y:13454870-T-C hg38:Y:11299194-T-C ***
hg19:Y:13467325-C-T hg38:Y:11311649-C-T ***
hg19:Y:13467336-A-C hg38:Y:11311660-A-C ***
hg19:Y:13467337-G-A hg38:Y:11311661-G-A ***
hg19:Y:13969060-C-T hg38:Y:11848354-C-T ***
hg19:Y:14704728-T-G hg38:Y:12592794-T-G ***
hg19:Y:14704730-T-A hg38:Y:12592796-T-A ***
hg19:Y:14704733-A-T hg38:Y:12592799-A-T ***
hg19:Y:15406939-TAAA-T,TAAAAA hg38:Y:13295059-TAAA-T,TAAAAA 20×A***
hg19:Y:15445475-T-C hg38:Y:13333595-T-C ***
hg19:Y:15951464-T-C hg38:Y:13839584-T-C ***
hg19:Y:16000916-T-C hg38:Y:13889036-T-C ***
hg19:Y:16321430-C-A hg38:Y:14209550-C-A ***
hg19:Y:16395075-T-TG hg38:Y:14283195-T-TG ***
hg19:Y:17787106-CA-C,CAA hg38:Y:15675226-CA-C,CAA 19×A***
hg19:Y:18565061-CAAAAA-C hg38:Y:16453181-CAAAAA-C 27×A***
hg19:Y:20804822-T-C hg38:Y:18642936-T-C P4_Gap ***
hg19:Y:21475931-G-A hg38:Y:19314045-G-A ***
hg19:Y:23011258-A-G hg38:Y:20849372-A-G ***
hg19:Y:28601002-G-GT hg38:Y:26454855-G-GT ***
hg38:Y:56871190-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B2008421472672092385908219649
Used in age calculations1472672092385908219649
Counts of SNPs3938
Variant counts last updated 2025-12-12 02:36:22.


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