Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > S426 > S190 > FGC3215 > FGC3216 > FGC3197 > FGC3198

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFB38
92306-A
BigY3
92306
FB-P312v2
92306
hg19:Y:3563184-G-A hg38:Y:3695143-G-A A*
hg19:Y:13823241-T-A hg38:Y:11702535-T-A DYZ17 A*
hg19:Y:20222940-C-T hg38:Y:18061054-C-T P5_Dst ***A*
hg19:Y:20296881-G-C hg38:Y:18134995-G-C P5_Dst A*
hg19:Y:4793390-T-C hg38:Y:4925349-T-C FT39258 **+
hg19:Y:5604530-C-A hg38:Y:5736489-C-A FT39711 **+
hg19:Y:8858141-G-A hg38:Y:8990100-G-A FT40989 YY++
hg19:Y:15989655-G-A hg38:Y:13877775-G-A FT42130 YY++
hg19:Y:18707262-G-T hg38:Y:16595382-G-T FT43114 YY++
hg19:Y:18964816-G-C hg38:Y:16852936-G-C FT43213 YY++
hg19:Y:21485475-G-A hg38:Y:19323589-G-A FT43644 YY++
hg19:Y:28611981-C-A hg38:Y:26465834-C-A FT44579 **+
P312v2:Y:11563792-G-A +
P312v2:Y:12102526-G-T +
hg19:Y:9191076-AACAC-A hg38:Y:9353467-AACAC-A 20×AC*
hg19:Y:22367981-GCAGT-ACAGC hg38:Y:20206095-GCAGT-ACAGC DYZ19 *
hg19:Y:17507641-GT-G hg38:Y:15395761-GT-G *
hg19:Y:9340831-AACAC-A hg38:Y:9503222-AACAC-A 22×AC*
hg38:Y:10693579-TTT-GTC,TTC *
hg38:Y:10849636-AACACTACAC-AACAC,TTCACTACAG *
hg19:Y:13470545-AGCC-GGCT hg38:Y:11314869-AGCC-GGCT *
hg19:Y:13489766-ACCCGGCC-CGACCGCA hg38:Y:11334090-ACCCGGCC-CGACCGCA *
hg19:Y:17507641-GT-A hg38:Y:15395761-GT-A *
hg19:Y:28587715-CC-TCG hg38:Y:26441568-CC-TCG *
hg19:Y:9211352-AACACACACACACACAC-A,AACACACACACACAC hg38:Y:9373743-AACACACACACACACAC-A,AACACACACACACAC 22×AC*
hg19:Y:22236219-CAA-AAA,AAT hg38:Y:20074333-CAA-AAA,AAT DYZ19 *
hg19:Y:22291829-CGTTA-TGTTG hg38:Y:20129943-CGTTA-TGTTG DYZ19 *
hg19:Y:22359069-CAGAA-AAGAG hg38:Y:20197183-CAGAA-AAGAG DYZ19 *
hg19:Y:22454821-TTATG-GTCTT hg38:Y:20292935-TTATG-GTCTT DYZ19 *
hg19:Y:22477572-TTGTT-GTGTG,GTGTT hg38:Y:20315686-TTGTT-GTGTG,GTGTT DYZ19 *
hg19:Y:24047695-GA-CG hg38:Y:21901548-GA-CG *
hg19:Y:24934025-C-T hg38:Y:22787878-C-T g1 *
hg19:Y:27055693-CTT-C,CT hg38:Y:24909546-CTT-C,CT P1_r4 18×T*
P312v2:Y:11989300-G-A *
hg19:Y:20141149-C-CT hg38:Y:18029269-C-CT P5_Dst 12×T**
hg19:Y:28214049-C-CT hg38:Y:26067902-C-CT P1_b4 14×T**
hg19:Y:22236528-TA-AT hg38:Y:20074642-TA-AT DYZ19 **
hg19:Y:13745182-A-C hg38:Y:11589506-A-C DYZ17 **
hg19:Y:13467197-CCGTG-AAGTT hg38:Y:11311521-CCGTG-AAGTT **
hg19:Y:21631117-A-T hg38:Y:19469231-A-T **
hg19:Y:9959860-TAATTAATAAT-C hg38:Y:10122251-TAATTAATAAT-C **
hg19:Y:26558021-T-C hg38:Y:24411874-T-C P1_g2 **
hg19:Y:22355626-A-G hg38:Y:20193740-A-G DYZ19 **
hg19:Y:13476662-AAACC-GAATG hg38:Y:11320986-AAACC-GAATG **
hg19:Y:13724165-C-A hg38:Y:11568489-C-A DYZ17 **
hg19:Y:20127900-G-GC hg38:Y:18016020-G-GC FGCLR88 P5_Dst **
hg19:Y:22348898-T-C hg38:Y:20187012-T-C DYZ19 **
hg19:Y:27056889-ATT-A hg38:Y:24910742-ATT-A P1_r4 19×T**
hg19:Y:26428127-C-A hg38:Y:24281980-C-A P1_Y1 **
hg19:Y:27466757-T-G hg38:Y:25320610-T-G P1_Y2 **
hg19:Y:18329043-C-CTT hg38:Y:16217163-C-CTT P6_Prx 17×T**
hg19:Y:21002535-T-C hg38:Y:18840649-T-C P4_Dst 16×TC**
hg19:Y:21631108-A-G hg38:Y:19469222-A-G **
hg19:Y:18316529-CAA-C hg38:Y:16204649-CAA-C P6_Prx 27×A**
hg19:Y:26124426-C-A hg38:Y:23978279-C-A P1_Y1 **
hg19:Y:8814327-A-T hg38:Y:8946286-A-T ****
hg19:Y:15102593-T-C hg38:Y:12990681-T-C *****
hg19:Y:19326897-C-T hg38:Y:17215017-C-T *****
hg19:Y:19600369-A-T hg38:Y:17488489-A-T P5_Prx **
hg19:Y:19700241-CAAAA-C hg38:Y:17588361-CAAAA-C P5_Prx 19×A**
hg19:Y:19768203-A-T hg38:Y:17656323-A-T P5_Prx **
hg19:Y:19832911-TA-T hg38:Y:17721031-TA-T P5_Prx 9×A**
hg19:Y:20022443-C-A hg38:Y:17910563-C-A P5_Prx 24×T**
hg19:Y:20620714-A-T hg38:Y:18458828-A-T P4_Prx **
hg19:Y:21746379-C-T hg38:Y:19584493-C-T ****
hg19:Y:21949709-T-C hg38:Y:19787823-T-C ****
hg19:Y:25940446-T-A hg38:Y:23794299-T-A P1_Y1 **
hg19:Y:26407014-T-G hg38:Y:24260867-T-G P1_Y1 **
hg19:Y:27877440-G-A hg38:Y:25731293-G-A P1_Y2 **
hg19:Y:28363317-AT-A hg38:Y:26217170-AT-A P1_gr2 14×T**
hg19:Y:25409789-G-T hg38:Y:23263642-G-T P2_r2 **
hg19:Y:27492911-T-G hg38:Y:25346764-T-G P1_Y2 **
hg19:Y:28449637-C-CT hg38:Y:26303490-C-CT P1_gr2 17×T**
hg19:Y:4292223-G-A hg38:Y:4424182-G-A **
hg19:Y:4880709-G-TT hg38:Y:5012668-G-TT 22×T**
hg19:Y:6128312-C-A hg38:Y:6260271-C-A **
hg19:Y:13708384-A-T hg38:Y:11552708-A-T DYZ17 **
hg19:Y:13716447-CG-GC hg38:Y:11560771-CG-GC DYZ17 **
hg19:Y:13721649-G-T hg38:Y:11565973-G-T DYZ17 **
hg19:Y:13726316-G-T hg38:Y:11570640-G-T DYZ17 **
hg19:Y:13727244-ACG-CCT hg38:Y:11571568-ACG-CCT DYZ17 **
hg19:Y:13727953-A-T hg38:Y:11572277-A-T DYZ17 **
hg19:Y:13734238-AAT-CAG hg38:Y:11578562-AAT-CAG DYZ17 **
hg19:Y:13735846-G-T hg38:Y:11580170-G-T DYZ17 **
hg19:Y:13735850-G-T hg38:Y:11580174-G-T DYZ17 **
hg19:Y:15806192-C-A hg38:Y:13694312-C-A **
hg19:Y:15835396-G-C hg38:Y:13723516-G-C **
hg19:Y:17301260-AAGAAAAGAAAAAAAAGAAGCGGT-GAAAAGAAAAAAAAGAAGCGGG hg38:Y:15189380-AAGAAAAGAAAAAAAAGAAGCGGT-GAAAAGAAAAAAAAGAAGCGGG **
hg38:Y:21757553-AAA-GAT **
hg19:Y:28407539-C-T hg38:Y:26261392-C-T P1_gr2 **
hg19:Y:6359095-CAAAAAAA-C hg38:Y:6491054-CAAAAAAA-C 30×A**
hg19:Y:16709236-A-C hg38:Y:14597356-A-C **
hg19:Y:17726560-G-A hg38:Y:15614680-G-A **
hg19:Y:17726580-C-T hg38:Y:15614700-C-T **
hg19:Y:18530394-C-T hg38:Y:16418514-C-T P6_Dst **
hg19:Y:18530399-TA-CG hg38:Y:16418519-TA-CG P6_Dst **
hg19:Y:18530413-G-A hg38:Y:16418533-G-A P6_Dst **
hg19:Y:18530434-AC-CA hg38:Y:16418554-AC-CA P6_Dst **
hg19:Y:18535386-G-T hg38:Y:16423506-G-T P6_Dst **
hg19:Y:20083464-TTTTA-T hg38:Y:17971584-TTTTA-T P5_Dst 5×TTTA**
hg19:Y:20264750-T-C hg38:Y:18102864-T-C P5_Dst **
hg19:Y:20336969-C-A hg38:Y:18175083-C-A P5_Dst **
hg19:Y:20493759-A-G hg38:Y:18331873-A-G P5_Dst **
hg19:Y:20509521-T-C hg38:Y:18347635-T-C P5_Dst **
hg19:Y:20570925-G-A hg38:Y:18409039-G-A P5_Dst **
hg19:Y:21631150-T-G hg38:Y:19469264-T-G **
hg19:Y:22355726-C-A hg38:Y:20193840-C-A DYZ19 **
hg38:Y:21778783-G-A **
hg19:Y:24646349-TC-T hg38:Y:22500202-TC-T P3_b2 **
hg19:Y:25658011-GTT-G hg38:Y:23511864-GTT-G P1_b3 24×T**
hg19:Y:25921854-T-C hg38:Y:23775707-T-C P1_Y1 **
hg19:Y:26906694-G-GAA hg38:Y:24760547-G-GAA P1_r3 19×A**
hg19:Y:27398510-CAA-C hg38:Y:25252363-CAA-C P1_g3 23×A**
hg19:Y:27411141-A-G hg38:Y:25264994-A-G P1_g3 **
hg19:Y:27442383-A-T hg38:Y:25296236-A-T P1_Y2 **
hg19:Y:27517816-C-A hg38:Y:25371669-C-A P1_Y2 **
hg19:Y:27542744-A-C hg38:Y:25396597-A-C P1_Y2 **
hg19:Y:27579890-C-T hg38:Y:25433743-C-T P1_Y2 **
hg19:Y:27659157-G-GA hg38:Y:25513010-G-GA P1_Y2 13×A**
hg19:Y:27799914-C-T hg38:Y:25653767-C-T P1_Y2 **
hg19:Y:27804388-T-C hg38:Y:25658241-T-C P1_Y2 **
hg19:Y:27924459-C-A hg38:Y:25778312-C-A P1_Y2 **
hg19:Y:28385031-C-T hg38:Y:26238884-C-T P1_gr2 **
hg19:Y:28385085-A-T hg38:Y:26238938-A-T P1_gr2 **
hg19:Y:28385109-A-G hg38:Y:26238962-A-G P1_gr2 **
hg19:Y:22240640-A-G hg38:Y:20078754-A-G DYZ19 ***
hg19:Y:20134533-TA-T hg38:Y:18022653-TA-T P5_Dst 11×A***
hg19:Y:25431792-C-CT hg38:Y:23285645-C-CT P2_r2 10×T***
hg19:Y:20914498-CA-C hg38:Y:18752612-CA-C P4_Dst 12×A***
hg19:Y:20348650-AT-A hg38:Y:18186764-AT-A P5_Dst 9×T***
hg19:Y:22484904-T-C hg38:Y:20323018-T-C DYZ19 ***
hg19:Y:20213749-ATT-A hg38:Y:18051863-ATT-A P5_Dst 14×T***
hg19:Y:24675448-CT-C hg38:Y:22529301-CT-C P3_b2 12×T***
hg19:Y:17859336-C-T hg38:Y:15747456-C-T CTS8171 ***
hg19:Y:22487532-A-T hg38:Y:20325646-A-T DYZ19 ***
hg19:Y:17596201-GTA-G hg38:Y:15484321-GTA-G ***
hg19:Y:9591034-GA-G hg38:Y:9753425-GA-G IR3_Prx 12×A***
hg19:Y:25529718-C-T hg38:Y:23383571-C-T P1_gr1 ***
hg19:Y:27275864-T-C hg38:Y:25129717-T-C P1_g3 ***
hg19:Y:22479905-G-T hg38:Y:20318019-G-T BY25225 DYZ19 ***
hg19:Y:22357810-T-C hg38:Y:20195924-T-C DYZ19 ***
hg19:Y:22479891-C-T hg38:Y:20318005-C-T BY18419BY25224 DYZ19 ***
hg19:Y:58996556-A-T hg38:Y:56850409-A-T ***
hg19:Y:9623645-T-TA hg38:Y:9786036-T-TA IR3_Prx 11×A***
hg19:Y:27711690-C-CT hg38:Y:25565543-C-CT P1_Y2 17×T***
hg19:Y:27367006-T-C hg38:Y:25220859-T-C P1_g3 ***
hg19:Y:22341554-C-A hg38:Y:20179668-C-A DYZ19 ***
hg19:Y:8030030-TAA-T,TA hg38:Y:8161989-TAA-T,TA 26×A***
hg19:Y:22456994-C-A hg38:Y:20295108-C-A DYZ19 ***
hg19:Y:27940342-A-G hg38:Y:25794195-A-G P1_Y2 ***
hg19:Y:22467206-TGTTT-GGTTA hg38:Y:20305320-TGTTT-GGTTA DYZ19 ***
hg19:Y:26433572-CTT-C hg38:Y:24287425-CTT-C P1_Y1 19×T***
hg19:Y:22484576-G-T hg38:Y:20322690-G-T BY22163BY22186 DYZ19 ***
hg19:Y:22466814-A-G hg38:Y:20304928-A-G E625 DYZ19 ***
hg19:Y:22259414-A-T hg38:Y:20097528-A-T DYZ19 ***
hg19:Y:26558027-A-C hg38:Y:24411880-A-C P1_g2 ***
hg19:Y:17802195-AAG-A hg38:Y:15690315-AAG-A ***
hg19:Y:23045471-CA-C,CAA hg38:Y:20883585-CA-C,CAA 16×A***
hg19:Y:9424598-GA-G,GAA hg38:Y:9586989-GA-G,GAA 16×A***
hg19:Y:13719358-T-A hg38:Y:11563682-T-A DYZ17 ***
hg19:Y:16784369-C-A hg38:Y:14672489-C-A ******
hg19:Y:21224779-ATT-A,ATTT hg38:Y:19062893-ATT-A,ATTT 19×T***
hg19:Y:13475481-T-G hg38:Y:11319805-T-G ***
hg38:Y:10760742-C-G ***
hg19:Y:14765676-ATTT-A,ATTTT hg38:Y:12653745-ATTT-A,ATTTT 21×T***
hg38:Y:10776333-C-A ***
hg19:Y:23471038-CAAA-C,CAA hg38:Y:21309152-CAAA-C,CAA 19×A***
hg19:Y:22259400-T-G hg38:Y:20097514-T-G DYZ19 ***
hg19:Y:22320604-A-T hg38:Y:20158718-A-T DYZ19 ***
hg19:Y:19611206-CTT-C hg38:Y:17499326-CTT-C P5_Prx 26×T***
hg19:Y:20570108-T-A hg38:Y:18408222-T-A P5_Dst ***
hg19:Y:24389894-CTT-C,CT hg38:Y:22243747-CTT-C,CT 26×T***
hg19:Y:19064934-CA-C hg38:Y:16953054-CA-C 8×A***
hg19:Y:20573712-G-A hg38:Y:18411826-G-A P5_Dst ***
hg19:Y:3869081-A-G hg38:Y:4001040-A-G ***
hg19:Y:6621719-T-C hg38:Y:6753678-T-C ******
hg19:Y:9949998-T-C hg38:Y:10112389-T-C ******
hg19:Y:14505713-C-T hg38:Y:12393918-C-T ******
hg19:Y:17085721-CTT-C,CT hg38:Y:14973841-CTT-C,CT 20×T***
hg19:Y:17507641-G-A hg38:Y:15395761-G-A ***
hg19:Y:21125027-G-A hg38:Y:18963141-G-A ******
hg19:Y:24388567-A-G hg38:Y:22242420-A-G ***
hg19:Y:24961031-C-A hg38:Y:22814884-C-A g1 ***
hg19:Y:18390083-CA-C,CAA hg38:Y:16278203-CA-C,CAA P6_Gap 19×A***
hg19:Y:22298196-CCATC-TCATT hg38:Y:20136310-CCATC-TCATT DYZ19 ***
hg19:Y:7164467-CAA-C,CAAA hg38:Y:7296426-CAA-C,CAAA 24×A***
hg19:Y:22490551-C-A hg38:Y:20328665-C-A DYZ19 ***
hg19:Y:2861534-CAA-C,CA hg38:Y:2993493-CAA-C,CA 25×A***
hg19:Y:4067402-G-T hg38:Y:4199361-G-T ***
hg19:Y:4878246-CAAA-C,CAAAA hg38:Y:5010205-CAAA-C,CAAAA 18×A***
hg19:Y:6686250-C-A hg38:Y:6818209-C-A ***
hg19:Y:7717633-CCCTCCC-TCCTTTCCT,TCCTTTCCTTCCCTCCC hg38:Y:7849592-CCCTCCC-TCCTTTCCT,TCCTTTCCTTCCCTCCC ***
hg19:Y:7832071-G-GTCTT,GTCTTTCTT hg38:Y:7964030-G-GTCTT,GTCTTTCTT 18×TCTT***
hg38:Y:9056031-TATTT-CATTC ***
hg38:Y:10683323-ATTTCTTTCG-CTATCTTTCC ***
hg38:Y:10685921-A-TT ***
hg38:Y:10691348-ATTCCATTCCATTCCATTCCATTCCAT-TTTCCATTCCATTCCATTCCATTCCAC ***
hg38:Y:10776534-TTCC-ATCT ***
hg38:Y:10987184-TTC-ATT ***
hg38:Y:11018818-TTTCG-GTTCA ***
hg19:Y:13447321-CCACTCCACTCCACTC-A hg38:Y:11291645-CCACTCCACTCCACTC-A ***
hg19:Y:13452374-TTCCATTCCATTCCATTCCATTCAAATACACTCCTTGC-GTCAAATCCACTCCATGA,TTCCATTCCATTCCATTCCAGTCAAATCCACTCCATTC hg38:Y:11296698-TTCCATTCCATTCCATTCCATTCAAATACACTCCTTGC-GTCAAATCCACTCCATGA,TTCCATTCCATTCCATTCCAGTCAAATCCACTCCATTC ***
hg19:Y:13489367-TCCCCGCCC-CCCACGCCA hg38:Y:11333691-TCCCCGCCC-CCCACGCCA ***
hg19:Y:13728937-TATAT-CATAA,TATAA hg38:Y:11573261-TATAT-CATAA,TATAA DYZ17 ***
hg19:Y:13965269-CA-C,CAA hg38:Y:11844563-CA-C,CAA 21×A***
hg19:Y:18204985-CA-C,CAA hg38:Y:16093105-CA-C,CAA 23×A***
hg19:Y:22739738-AAAG-AAAAT,G hg38:Y:20577852-AAAG-AAAAT,G ***
hg19:Y:22851638-A-T hg38:Y:20689752-A-T ***
hg38:Y:21754361-CAC-AAT,CAT ***
hg38:Y:21757500-TT-CC ***
hg19:Y:28350213-A-G hg38:Y:26204066-A-G P1_gr2 ***
hg19:Y:28351262-T-C hg38:Y:26205115-T-C P1_gr2 ***
hg19:Y:28357150-C-CT hg38:Y:26211003-C-CT P1_gr2 15×T***
hg19:Y:28351575-C-T hg38:Y:26205428-C-T P1_gr2 ***
hg19:Y:28367516-C-T hg38:Y:26221369-C-T P1_gr2 ***
hg19:Y:28347027-GAGGTG-AAGGCA hg38:Y:26200880-GAGGTG-AAGGCA P1_gr2 ***
hg19:Y:26202302-C-CT hg38:Y:24056155-C-CT P1_Y1 16×T***
hg19:Y:9527310-C-T hg38:Y:9689701-C-T ***
hg19:Y:9529754-T-C hg38:Y:9692145-T-C IR3_Prx ***
hg19:Y:9535507-G-A hg38:Y:9697898-G-A IR3_Prx ***
hg19:Y:9555204-T-C hg38:Y:9717595-T-C IR3_Prx ***
hg19:Y:9594425-C-G hg38:Y:9756816-C-G IR3_Prx ***
hg19:Y:9603887-C-A hg38:Y:9766278-C-A IR3_Prx ***
hg19:Y:16146799-G-T hg38:Y:14034919-G-T P8_Dst ***
hg19:Y:18467786-C-T hg38:Y:16355906-C-T P6_Dst ***
hg19:Y:18473240-C-T hg38:Y:16361360-C-T P6_Dst ***
hg19:Y:18486123-C-T hg38:Y:16374243-C-T P6_Dst ***
hg19:Y:18488449-T-C hg38:Y:16376569-T-C P6_Dst ***
hg19:Y:18499090-T-TC hg38:Y:16387210-T-TC P6_Dst ***
hg19:Y:18516089-G-A hg38:Y:16404209-G-A P6_Dst ***
hg19:Y:18530352-AT-CAA hg38:Y:16418472-AT-CAA P6_Dst ***
hg19:Y:18530360-T-C hg38:Y:16418480-T-C P6_Dst ***
hg19:Y:18530372-TGT-GGA hg38:Y:16418492-TGT-GGA P6_Dst ***
hg19:Y:19839616-GAA-G,GA hg38:Y:17727736-GAA-G,GA P5_Prx 26×A***
hg19:Y:20067536-G-A hg38:Y:17955656-G-A P5_Dst ***
hg19:Y:20073982-A-G hg38:Y:17962102-A-G P5_Dst ***
hg19:Y:20079333-C-T hg38:Y:17967453-C-T P5_Dst ***
hg19:Y:20130928-C-A hg38:Y:18019048-C-A P5_Dst ***
hg19:Y:20132736-C-T hg38:Y:18020856-C-T P5_Dst ***
hg19:Y:20228938-T-C hg38:Y:18067052-T-C P5_Dst ***
hg19:Y:20251016-A-G hg38:Y:18089130-A-G P5_Dst ***
hg19:Y:20251191-C-G hg38:Y:18089305-C-G P5_Dst ***
hg19:Y:20254214-C-T hg38:Y:18092328-C-T P5_Dst ***
hg19:Y:20289135-G-T hg38:Y:18127249-G-T P5_Dst ***
hg19:Y:20296881-GCT-CC hg38:Y:18134995-GCT-CC P5_Dst ***
hg19:Y:20310697-G-A hg38:Y:18148811-G-A P5_Dst ***
hg19:Y:20412324-G-A hg38:Y:18250438-G-A P5_Dst ***
hg19:Y:20419924-A-G hg38:Y:18258038-A-G P5_Dst ***
hg19:Y:20421691-C-T hg38:Y:18259805-C-T P5_Dst ***
hg19:Y:20430919-T-C hg38:Y:18269033-T-C P5_Dst ***
hg19:Y:20443098-G-A hg38:Y:18281212-G-A P5_Dst ***
hg19:Y:20450709-C-G hg38:Y:18288823-C-G P5_Dst ***
hg19:Y:20483283-T-A hg38:Y:18321397-T-A P5_Dst ***
hg19:Y:20489044-CTGCA-TTGCT hg38:Y:18327158-CTGCA-TTGCT P5_Dst ***
hg19:Y:20498837-G-A hg38:Y:18336951-G-A P5_Dst ***
hg19:Y:20522415-C-T hg38:Y:18360529-C-T P5_Dst ***
hg19:Y:20588403-G-A hg38:Y:18426517-G-A P5_Dst ***
hg19:Y:20601484-A-G hg38:Y:18439598-A-G P5_Dst ***
hg19:Y:20885270-A-G hg38:Y:18723384-A-G P4_Dst ***
hg19:Y:20894079-G-T hg38:Y:18732193-G-T P4_Dst ***
hg19:Y:20910779-G-T hg38:Y:18748893-G-T P4_Dst ***
hg19:Y:20936910-C-A hg38:Y:18775024-C-A P4_Dst ***
hg19:Y:20988937-G-A hg38:Y:18827051-G-A P4_Dst ***
hg19:Y:21024737-G-T hg38:Y:18862851-G-T P4_Dst ***
hg19:Y:22229646-AAGA-TAGT hg38:Y:20067760-AAGA-TAGT DYZ19 ***
hg19:Y:22259423-TGTCCT-ATGTTCG hg38:Y:20097537-TGTCCT-ATGTTCG DYZ19 ***
hg19:Y:22341427-T-A hg38:Y:20179541-T-A DYZ19 ***
hg19:Y:22341495-T-A hg38:Y:20179609-T-A DYZ19 ***
hg19:Y:22355736-T-G hg38:Y:20193850-T-G DYZ19 ***
hg19:Y:22367963-A-T hg38:Y:20206077-A-T DYZ19 ***
hg19:Y:22451356-AAT-CAA hg38:Y:20289470-AAT-CAA DYZ19 ***
hg19:Y:22457013-ATC-GTT hg38:Y:20295127-ATC-GTT DYZ19 ***
hg19:Y:22475178-ATGA-TTGC hg38:Y:20313292-ATGA-TTGC DYZ19 ***
hg19:Y:22479943-A-C hg38:Y:20318057-A-C BY25227 DYZ19 ***
hg19:Y:22484568-A-T hg38:Y:20322682-A-T DYZ19 ***
hg38:Y:21786642-T-C ***
hg19:Y:24068253-T-C hg38:Y:21922106-T-C P3_b1 ***
hg19:Y:24490720-G-A hg38:Y:22344573-G-A ***
hg19:Y:24526429-G-T hg38:Y:22380282-G-T P3_t2 ***
hg19:Y:24542371-G-A hg38:Y:22396224-G-A P3_t2 ***
hg19:Y:24552403-A-T hg38:Y:22406256-A-T P3_t2 ***
hg19:Y:24581767-G-A hg38:Y:22435620-G-A P3_t2 ***
hg19:Y:24596611-A-G hg38:Y:22450464-A-G P3_t2 ***
hg19:Y:24606967-G-T hg38:Y:22460820-G-T P3_t2 ***
hg19:Y:24612175-C-G hg38:Y:22466028-C-G P3_t2 ***
hg19:Y:24619510-G-T hg38:Y:22473363-G-T P3_t2 ***
hg19:Y:24862250-CA-C hg38:Y:22716103-CA-C IR1_R 28×A***
hg19:Y:24904674-GTT-G,GTTT hg38:Y:22758527-GTT-G,GTTT g1 21×T***
hg19:Y:25165648-CTT-C hg38:Y:23019501-CTT-C g1 22×T***
hg19:Y:25362145-C-T hg38:Y:23215998-C-T P2_r2 ***
hg19:Y:25375046-A-G hg38:Y:23228899-A-G P2_r2 ***
hg19:Y:25440714-C-T hg38:Y:23294567-C-T P2_r2 ***
hg19:Y:25453956-T-A hg38:Y:23307809-T-A P2_r2 ***
hg19:Y:25454490-T-C hg38:Y:23308343-T-C P2_r2 ***
hg19:Y:25500519-C-A hg38:Y:23354372-C-A P2_r2 ***
hg19:Y:25529676-A-G hg38:Y:23383529-A-G P1_gr1 ***
hg19:Y:25529744-T-A hg38:Y:23383597-T-A P1_gr1 ***
hg19:Y:25529749-A-G hg38:Y:23383602-A-G P1_gr1 ***
hg19:Y:25529756-T-A hg38:Y:23383609-T-A P1_gr1 ***
hg19:Y:25649929-C-T hg38:Y:23503782-C-T P1_b3 ***
hg19:Y:25650303-C-T hg38:Y:23504156-C-T P1_b3 ***
hg19:Y:25674539-C-T hg38:Y:23528392-C-T P1_b3 ***
hg19:Y:26985038-T-C hg38:Y:24838891-T-C P1_r4 ***
hg19:Y:27072411-T-C hg38:Y:24926264-T-C P1_r4 ***
hg19:Y:27146549-A-G hg38:Y:25000402-A-G P1_g3 10×T***
hg19:Y:27152856-CT-C hg38:Y:25006709-CT-C P1_g3 8×T***
hg19:Y:27204574-C-T hg38:Y:25058427-C-T P1_g3 ***
hg19:Y:27247447-G-A hg38:Y:25101300-G-A P1_g3 ***
hg19:Y:27247972-T-A hg38:Y:25101825-T-A P1_g3 ***
hg19:Y:27280269-A-G hg38:Y:25134122-A-G P1_g3 ***
hg19:Y:27394633-G-A hg38:Y:25248486-G-A P1_g3 ***
hg19:Y:27471965-C-A hg38:Y:25325818-C-A P1_Y2 ***
hg19:Y:27480337-TCA-T hg38:Y:25334190-TCA-T P1_Y2 ***
hg19:Y:27483084-GCCTT-ACCTC hg38:Y:25336937-GCCTT-ACCTC P1_Y2 ***
hg19:Y:27544126-AT-A hg38:Y:25397979-AT-A P1_Y2 11×T***
hg19:Y:27551819-A-G hg38:Y:25405672-A-G P1_Y2 ***
hg19:Y:27552106-G-A hg38:Y:25405959-G-A P1_Y2 ***
hg19:Y:27553635-T-C hg38:Y:25407488-T-C P1_Y2 ***
hg19:Y:27558623-G-T hg38:Y:25412476-G-T P1_Y2 ***
hg19:Y:27575352-CAA-C,CA hg38:Y:25429205-CAA-C,CA P1_Y2 13×A***
hg19:Y:27582244-C-T hg38:Y:25436097-C-T P1_Y2 ***
hg19:Y:27601903-G-T hg38:Y:25455756-G-T P1_Y2 ***
hg19:Y:27635497-TGTGC-T hg38:Y:25489350-TGTGC-T P1_Y2 ***
hg19:Y:27650687-G-T hg38:Y:25504540-G-T P1_Y2 ***
hg19:Y:27653583-G-C hg38:Y:25507436-G-C P1_Y2 ***
hg19:Y:27675644-C-A hg38:Y:25529497-C-A P1_Y2 ***
hg19:Y:27798852-A-G hg38:Y:25652705-A-G P1_Y2 ***
hg19:Y:27819259-C-T hg38:Y:25673112-C-T P1_Y2 ***
hg19:Y:27820230-A-G hg38:Y:25674083-A-G P1_Y2 ***
hg19:Y:27836007-G-C hg38:Y:25689860-G-C P1_Y2 ***
hg19:Y:27955990-G-A hg38:Y:25809843-G-A P1_Y2 ***
hg19:Y:27986716-T-C hg38:Y:25840569-T-C P1_Y2 ***
hg19:Y:28023171-A-G hg38:Y:25877024-A-G P1_Y2 ***
hg19:Y:28036866-G-A hg38:Y:25890719-G-A P1_Y2 ***
hg19:Y:28345554-A-C hg38:Y:26199407-A-C P1_gr2 ***
hg19:Y:28347134-T-C hg38:Y:26200987-T-C P1_gr2 ***
hg19:Y:28347220-C-T hg38:Y:26201073-C-T P1_gr2 ***
hg19:Y:28347278-C-T hg38:Y:26201131-C-T P1_gr2 ***
hg19:Y:28349003-G-C hg38:Y:26202856-G-C P1_gr2 ***
hg19:Y:28351222-T-C hg38:Y:26205075-T-C P1_gr2 ***
hg19:Y:28357978-A-G hg38:Y:26211831-A-G P1_gr2 ***
hg19:Y:28361206-T-C hg38:Y:26215059-T-C P1_gr2 ***
hg19:Y:28372521-C-T hg38:Y:26226374-C-T P1_gr2 ***
hg19:Y:28376552-A-T hg38:Y:26230405-A-T P1_gr2 ***
hg19:Y:28380450-A-G hg38:Y:26234303-A-G P1_gr2 ***
hg19:Y:28384225-TAA-T hg38:Y:26238078-TAA-T P1_gr2 13×A***
hg19:Y:28391273-A-C hg38:Y:26245126-A-C P1_gr2 ***
hg19:Y:28392689-G-A hg38:Y:26246542-G-A P1_gr2 ***
hg19:Y:28412031-G-T hg38:Y:26265884-G-T P1_gr2 ***
hg19:Y:28415228-TG-CC hg38:Y:26269081-TG-CC P1_gr2 ***
hg19:Y:28418719-G-C hg38:Y:26272572-G-C P1_gr2 ***
hg19:Y:28425627-T-C hg38:Y:26279480-T-C P1_gr2 ***
hg19:Y:25334270-G-T hg38:Y:23188123-G-T P2_r1 18×A***
hg19:Y:25491429-CAA-C,CA hg38:Y:23345282-CAA-C,CA P2_r2 19×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 923061511715794727268352714
Kit: 92306-A*16000000100000008300000
Kit: 9230617698239100000008300000
Used in age calculations16000000100000008352714
Counts of SNPs55
Variant counts last updated 2025-04-09 03:16:28.

* BED data not available. Using default values.


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