Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > S426 > S190 > FGC3215 > Z36747 > Y16487 > Y16486 > Y16490

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFB38
19669007-A-G 17557127-A-G P5_Prx *A*
8568420-G-T 8700379-G-T YYA*
20865354-C-A 18703468-C-A P4_Dst 18×CAA*
6214996-C-T 6346955-C-T IR3_Dst *A*
19669013-G-A 17557133-G-A P5_Prx *A*
16154892-C-T 14043012-C-T P8_Dst ***A*
16155236-T-A 14043356-T-A P8_Dst ***A*
18009439-A-G 15897559-A-G P7_Dst YA*
18442391-G-A 16330511-G-A P6_Dst A*
18443227-C-T 16331347-C-T P6_Dst ***A*
18449340-G-A 16337460-G-A P6_Dst A*
18449450-A-G 16337570-A-G P6_Dst A*
18462826-T-C 16350946-T-C P6_Dst A*
18467361-T-C 16355481-T-C P6_Dst ***A*
18501771-T-G 16389891-T-G P6_Dst A*
18503962-A-G 16392082-A-G P6_Dst ***A*
18503966-T-C 16392086-T-C P6_Dst ***A*
18506632-C-A 16394752-C-A P6_Dst ***A*
18517226-G-A 16405346-G-A P6_Dst A*
18523768-T-C 16411888-T-C P6_Dst ***A*
19591956-T-C 17480076-T-C P5_Prx YA*
19919068-A-G 17807188-A-G P5_Prx A*
20232107-T-C 18070221-T-C P5_Dst A*
20245212-C-G 18083326-C-G P5_Dst ***A*
20257283-G-A 18095397-G-A P5_Dst A*
20267183-G-T 18105297-G-T P5_Dst ***A*
20268917-A-G 18107031-A-G P5_Dst ***A*
20288108-T-C 18126222-T-C P5_Dst A*
20297730-A-G 18135844-A-G P5_Dst ***A*
20313527-A-G 18151641-A-G P5_Dst A*
20324075-G-A 18162189-G-A P5_Dst ***A*
20339956-A-G 18178070-A-G P5_Dst ***A*
20367859-G-A 18205973-G-A P5_Dst ***A*
20368630-A-G 18206744-A-G P5_Dst ***A*
20376418-C-T 18214532-C-T P5_Dst ***A*
20391900-A-G 18230014-A-G P5_Dst A*
20405997-A-G 18244111-A-G P5_Dst ***A*
20406002-G-A 18244116-G-A P5_Dst ***A*
20406161-A-G 18244275-A-G P5_Dst ***A*
20410393-G-A 18248507-G-A P5_Dst ***A*
20441126-T-C 18279240-T-C P5_Dst ***A*
20442302-C-G 18280416-C-G P5_Dst ***A*
20452413-G-A 18290527-G-A P5_Dst A*
20466887-A-G 18305001-A-G P5_Dst ***A*
20508323-C-G 18346437-C-G P5_Dst ***A*
20508767-C-T 18346881-C-T P5_Dst A*
20510770-T-C 18348884-T-C P5_Dst ***A*
20521454-T-C 18359568-T-C P5_Dst ***A*
20522069-G-A 18360183-G-A P5_Dst A*
20536505-A-G 18374619-A-G P5_Dst A*
20538916-A-G 18377030-A-G P5_Dst ***A*
20555001-A-T 18393115-A-T P5_Dst ***A*
20562754-A-T 18400868-A-T P5_Dst A*
20565319-C-A 18403433-C-A P5_Dst ***A*
20568002-T-C 18406116-T-C P5_Dst ***A*
20568751-C-G 18406865-C-G P5_Dst ***A*
20583549-G-A 18421663-G-A P5_Dst A*
20586257-T-A 18424371-T-A P5_Dst ***A*
20590490-T-C 18428604-T-C P5_Dst A*
20597448-C-CG 18435562-C-CG P5_Dst ***A*
20602874-T-G 18440988-T-G P5_Dst ***A*
20640022-C-G 18478136-C-G P4_Prx ***A*
20853380-A-G 18691494-A-G P4_Dst ***A*
20863193-C-A 18701307-C-A P4_Dst ***A*
20865118-G-A 18703232-G-A P4_Dst A*
20865120-G-A 18703234-G-A P4_Dst A*
20866565-T-C 18704679-T-C P4_Dst ***A*
20871097-C-T 18709211-C-T P4_Dst ***A*
20875196-T-C 18713310-T-C P4_Dst A*
20885734-G-A 18723848-G-A P4_Dst A*
20893666-T-A 18731780-T-A P4_Dst ***A*
20905672-C-T 18743786-C-T P4_Dst ***A*
20928760-G-A 18766874-G-A P4_Dst ***A*
20932265-C-T 18770379-C-T P4_Dst A*
20934177-G-C 18772291-G-C P4_Dst ***A*
20952432-G-A 18790546-G-A P4_Dst ***A*
20955316-C-A 18793430-C-A P4_Dst A*
20966121-C-A 18804235-C-A P4_Dst A*
20971659-T-C 18809773-T-C P4_Dst ***A*
20973446-G-T 18811560-G-T P4_Dst ***A*
20992814-G-T 18830928-G-T P4_Dst A*
20993894-A-G 18832008-A-G P4_Dst ***A*
20999190-A-G 18837304-A-G P4_Dst Y***A*
21010521-T-C 18848635-T-C P4_Dst Y***A*
21014967-G-T 18853081-G-T P4_Dst Y***A*
21016356-T-A 18854470-T-A P4_Dst YA*
21022307-A-G 18860421-A-G P4_Dst YA*
6678058-C-T 6810017-C-T FT28782 YY++
7757719-C-T 7889678-C-T FT29035 YY++
8212803-T-G 8344762-T-G FT29167 YY++
21375413-A-G 19213527-A-G FT31190 YY++
23024697-A-G 20862811-A-G FT31553 YY++
25016655-C-CT 22870508-C-CT g1 16×T*
4439268-G-A 4571227-G-A *
22487017-C-G 20325131-C-G DYZ19 *
13448873-TCAT-CCAC 11293197-TCAT-CCAC *
6022206-C-T 6154165-C-T *
22270509-C-G 20108623-C-G BY215007 DYZ19 *
26519576-C-A 24373429-C-A P1_Y1 *
6403276-ACC-TCG 6535235-ACC-TCG *
11013930-C-CTCCAT,T *
13487755-AACC-CACA 11332079-AACC-CACA *
19757819-ATC-GTT 17645939-ATC-GTT P5_Prx *
19967463-T-A,AT 17855583-T-A,AT P5_Prx *
20778781-T-TTG,TTGTG 18616895-T-TTG,TTGTG P4_Prx 18×TG*
24302816-CAA-C,CA 22156669-CAA-C,CA P3_t1 24×A*
25662890-CAA-C,CA 23516743-CAA-C,CA P1_b3 15×A*
26122000-ATT-A,AT 23975853-ATT-A,AT P1_Y1 18×T*
20439958-GT-G 18278072-GT-G P5_Dst 16×T**
22493699-T-G 20331813-T-G DYZ19 **
28065155-CT-C 25919008-CT-C P1_Y2 15×T**
24646583-G-GT 22500436-G-GT P3_b2 21×T**
27772643-TA-T 25626496-TA-T P1_Y2 21×A**
15497999-G-T 13386119-G-T **
24486859-G-T 22340712-G-T **
13446531-A-AC 11290855-A-AC **
13446532-T-TCCAC 11290856-T-TCCAC **
6133169-T-A 6265128-T-A **
8288815-TAAAA-T 8420774-TAAAA-T 23×A*****
13725925-A-C 11570249-A-C **
17059146-G-A 14947266-G-A **
7095164-T-C 7227123-T-C **
17059114-T-C 14947234-T-C **
2856782-CTTTTTTTTTT-C 2988741-CTTTTTTTTTT-C 24×T****
3606127-T-C 3738086-T-C **
7346596-A-G 7478555-A-G ****
9949516-T-C 10111907-T-C *****
13467741-T-C 11312065-T-C ****
13529893-C-T 11374217-C-T *****
14163223-T-C 12042517-T-C ****
14182733-C-T 12062027-C-T ****
14739051-T-C 12627119-T-C ****
15188553-A-G 13076639-A-G ****
16103423-A-G 13991543-A-G P8_Prx **
16498582-T-C 14386702-T-C ****
19013294-C-A 16901414-C-A ****
22084648-T-C 19922762-T-C ****
24379067-A-G 22232920-A-G *****
20302110-G-GT 18140224-G-GT P5_Dst 10×T**
27358685-A-G 25212538-A-G P1_g3 **
6639768-G-C 6771727-G-C **
10087541-GATAG-TATAT 10249932-GATAG-TATAT **
10633206-TAT-CAA 11×ATTCC**
13709507-C-A 11553831-C-A **
13727925-G-A 11572249-G-A **
15117412-C-G 13005499-C-G **
16167944-GC-G 14056064-GC-G P8_Dst 12×C**
16498307-T-C 14386427-T-C **
20261459-G-C 18099573-G-C P5_Dst **
20280157-TCCTTC-CTCTTT 18118271-TCCTTC-CTCTTT P5_Dst **
20345719-GT-G 18183833-GT-G P5_Dst **
20846483-T-C 18684597-T-C P4_Dst **
20869021-G-TT 18707135-G-TT P4_Dst 21×T**
20933166-T-C 18771280-T-C P4_Dst **
22856216-T-G 20694330-T-G **
23084574-C-T 20922688-C-T **
21757411-GC-TA **
24568091-A-G 22421944-A-G P3_t2 **
25588696-T-C 23442549-T-C P1_gr1 **
27167317-A-C 25021170-A-C P1_g3 **
27368540-A-T 25222393-A-T P1_g3 **
27492133-G-A 25345986-G-A P1_Y2 **
27492168-C-T 25346021-C-T P1_Y2 **
27492196-G-C 25346049-G-C P1_Y2 **
27654872-A-G 25508725-A-G P1_Y2 **
27866897-AAAC-CAAG 25720750-AAAC-CAAG P1_Y2 **
27930873-T-A 25784726-T-A P1_Y2 **
27944488-A-G 25798341-A-G P1_Y2 **
28077604-T-G 25931457-T-G P1_Y2 **
28418662-G-A 26272515-G-A P1_gr2 **
28448272-CA-C 26302125-CA-C P1_gr2 13×A**
22295848-C-G 20133962-C-G DYZ19 ***
24866990-AT-A 22720843-AT-A IR1_R 11×T***
22479232-G-A 20317346-G-A FGC8621BY2051 DYZ19 ***
22362482-T-C 20200596-T-C DYZ19 ***
24859198-GA-G 22713051-GA-G IR1_R 12×A***
9551440-GT-G 9713831-GT-G IR3_Prx 11×T***
27166209-G-GA 25020062-G-GA P1_g3 11×A***
13302551-ACAG-CCAA 11146875-ACAG-CCAA ***
20757362-AT-A 18595476-AT-A P4_Prx 32×T***
20574077-G-A 18412191-G-A P5_Dst ***
22343991-T-A 20182105-T-A DYZ19 ***
20574118-T-C 18412232-T-C P5_Dst ***
5948795-C-G 6080754-C-G Z2127 ***
19495818-GAC-G 17383938-GAC-G ***
25007122-T-TA 22860975-T-TA g1 13×A***
22361666-C-T 20199780-C-T DYZ19 ***
27248568-GTTT-G 25102421-GTTT-G P1_g3 18×T***
27733713-CA-C 25587566-CA-C P1_Y2 26×A***
26094269-GT-G 23948122-GT-G P1_Y1 13×T***
20574099-G-C 18412213-G-C P5_Dst ***
20574092-AG-CT 18412206-AG-CT P5_Dst ***
19382304-G-GATT 17270424-G-GATT 7×ATT***
22259883-C-T 20097997-C-T DYZ19 ***
22318594-T-C 20156708-T-C FGC30740 DYZ19 ***
22318601-G-A 20156715-G-A BY25070 DYZ19 ***
22437469-T-C 20275583-T-C DYZ19 ***
9342611-T-C 9505002-T-C ***
22443888-T-A 20282002-T-A DYZ19 ***
13641480-CCT-AC 11485804-CCT-AC ***
22295819-C-T 20133933-C-T DYZ19 ***
27152919-T-C 25006772-T-C P1_g3 ***
18098741-CT-C 15986861-CT-C 10×T***
59030170-AAGGT-GGGGG 56884023-AAGGT-GGGGG ***
7769254-CT-C 7901213-CT-C 10×T******
22456108-T-G 20294222-T-G DYZ19 ***
13273750-TGAT-GGAA 11118074-TGAT-GGAA ***
13207274-CTTT-C 11051598-CTTT-C 16×T***
22511221-C-A 20349335-C-A DYZ19 ***
22437520-T-C 20275634-T-C DYZ19 ***
18321446-ATT-A 16209566-ATT-A P6_Prx 16×T***
22487511-C-G 20325625-C-G DYZ19 ***
13476260-G-A 11320584-G-A ***
21411406-T-TA 19249520-T-TA 10×A***
16608673-GGTGT-G 14496793-GGTGT-G 16×GT******
22590601-GA-G 20428715-GA-G 8×A***
18589697-A-ATT 16477817-A-ATT 18×T***
18738114-CT-C,CTT 16626234-CT-C,CTT 19×T***
15151502-CAAA-C,CA 13039589-CAAA-C,CA 23×A***
4878246-C-CAA 5010205-C-CAA 18×A***
22244016-A-G 20082130-A-G DYZ19 ***
14825824-CTTTTT-C,CTTT 12713891-CTTTTT-C,CTTT 18×T***
17264992-A-G 15153112-A-G ******
6403301-T-C 6535260-T-C ***
18045371-C-CTT 15933491-C-CTT 18×T***
22476751-C-T 20314865-C-T ALK177 DYZ19 ***
15336707-CA-C,CAA 13224825-CA-C,CAA 20×A***
15061734-C-T 12949826-C-T ******
23802430-CT-C,CTT 21640544-CT-C,CTT 13×T***
22254818-G-A 20092932-G-A BY25029 DYZ19 ***
7721318-T-C 7853277-T-C ***
22259637-CA-TC 20097751-CA-TC DYZ19 ***
7194626-G-GTT 7326585-G-GTT 17×T***
23597590-C-A 21435704-C-A ***
20585167-TA-T 18423281-TA-T P5_Dst 13×A***
3868673-A-T 4000632-A-T ***
4398030-G-T 4529989-G-T ******
6001981-A-C 6133940-A-C ***
6786911-ATTT-A,AT 6918870-ATTT-A,AT 17×T***
8062766-A-T 8194725-A-T ******
14233424-TCC-T 12112718-TCC-T ******
14634156-T-C 12522225-T-C ******
15077933-C-T 12966023-C-T ******
17474793-T-C 15362913-T-C ******
21056382-A-G 18894496-A-G FT270527 ******
23601843-G-A 21439957-G-A ******
22506866-G-T 20344980-G-T DYZ19 ***
22282073-GAAGC-TAAGT 20120187-GAAGC-TAAGT DYZ19 ***
28180701-C-CA 26034554-C-CA P1_b4 16×A***
9590558-C-CT 9752949-C-CT IR3_Prx 13×T***
8173902-A-C 8305861-A-C FTB17203 ***
16973472-T-G 14861592-T-G ***
13553672-GA-G 11397996-GA-G 12×A***
16098533-C-CG 13986653-C-CG P8_Prx 12×G***
20432608-T-C 18270722-T-C P5_Dst ***
13446415-CAGCC-AAGCA 11290739-CAGCC-AAGCA ***
13488775-CCTCC-ACTCG 11333099-CCTCC-ACTCG ***
11025555-TC-AA ***
13485684-AC-G 11330008-AC-G ***
13611374-CT-TC 11455698-CT-TC ***
13488092-GCC-CCT 11332416-GCC-CCT ***
19744991-ATT-A,AT 17633111-ATT-A,AT P5_Prx 23×T***
20441979-G-C 18280093-G-C P5_Dst ***
22479296-CC-GT 20317410-CC-GT DYZ19 ***
27548197-CT-C 25402050-CT-C P1_Y2 11×T***
28391647-CT-C 26245500-CT-C P1_gr2 13×T***
28350730-T-C 26204583-T-C P1_gr2 ***
28383241-A-G 26237094-A-G P1_gr2 ***
28430001-C-T 26283854-C-T P1_gr2 ***
24837250-G-GT 22691103-G-GT P3_b2 17×T***
26523585-CAAA-C 24377438-CAAA-C P1_Y1 20×A***
27467496-G-A 25321349-G-A P1_Y2 ***
22510449-TT-GG 20348563-TT-GG DYZ19 ***
22259765-AG-TA 20097879-AG-TA DYZ19 ***
28416289-CA-C 26270142-CA-C P1_gr2 ***
2813042-T-A 2945001-T-A ***
3205858-CA-C,CAAA 3337817-CA-C,CAAA 15×A***
3374847-CAA-C,CA 3506806-CAA-C,CA 23×A***
3758894-T-C 3890853-T-C ***
5683555-AT-CC 5815514-AT-CC ***
7003407-CAT-AAC 7135366-CAT-AAC ***
7123124-C-T 7255083-C-T ***
7123138-G-A 7255097-G-A ***
7123143-G-A 7255102-G-A ***
7123150-T-A 7255109-T-A ***
7123157-GCCTG-TCCTT 7255116-GCCTG-TCCTT ***
7207378-T-C 7339337-T-C ***
7217231-G-T 7349190-G-T ***
7442671-C-T 7574630-C-T ***
7442723-C-A 7574682-C-A ***
7483638-TAA-T,TA 7615597-TAA-T,TA IR1_L 23×A***
7976323-G-A 8108282-G-A ***
8389569-CTTTTTTTT-C 8521528-CTTTTTTTT-C 25×T***
9240049-TG-CA 9402440-TG-CA ***
9530430-G-A 9692821-G-A IR3_Prx ***
9532409-G-C 9694800-G-C IR3_Prx ***
9542928-T-C 9705319-T-C IR3_Prx ***
9552797-A-G 9715188-A-G IR3_Prx ***
9567070-CT-C 9729461-CT-C IR3_Prx ***
9568460-G-T 9730851-G-T IR3_Prx ***
9604272-A-G 9766663-A-G IR3_Prx ***
9606799-G-A 9769190-G-A IR3_Prx ***
9610343-G-C 9772734-G-C IR3_Prx ***
9613768-C-A 9776159-C-A IR3_Prx ***
9615417-A-G 9777808-A-G IR3_Prx ***
9626494-T-C 9788885-T-C IR3_Prx ***
9637920-T-C 9800311-T-C IR3_Prx ***
9665386-G-A 9827777-G-A IR3_Prx ***
9666292-A-G 9828683-A-G IR3_Prx ***
9670680-A-G 9833071-A-G IR3_Prx ***
9684431-T-C 9846822-T-C IR3_Prx ***
9717115-C-T 9879506-C-T IR3_Prx ***
9731523-C-A 9893914-C-A IR3_Prx ***
9830362-A-G 9992753-A-G ***
10030198-CT-C 10192589-CT-C ***
11020596-TCTG-CTT ***
13204051-GT-AC 11048375-GT-AC ***
13356612-G-A 11200936-G-A ***
13475676-TG-T 11320000-TG-T ***
13476298-GTG-CTT,GTT 11320622-GTG-CTT,GTT ***
13488484-TCAG-GCAT 11332808-TCAG-GCAT ***
13499999-G-A 11344323-G-A ***
13716466-TA-AT,TG 11560790-TA-AT,TG ***
14302439-CA-T 12181733-CA-T ***
14530715-C-T 12418916-C-T ***
14565187-C-G 12453387-C-G ***
14657763-A-G 12545828-A-G ***
15248209-A-G 13136295-A-G ***
15249043-G-T 13137129-G-T ***
15296621-G-T 13184720-G-T ***
15409882-TA-T 13298002-TA-T 9×A***
15732256-G-A 13620376-G-A ***
15748119-A-T 13636239-A-T ***
15893946-T-C 13782066-T-C ***
16129822-G-T 14017942-G-T P8_Prx ***
16800820-T-A 14688940-T-A ***
16896631-A-G 14784751-A-G ***
16968150-CAA-C,CA 14856270-CAA-C,CA 26×A***
17045874-A-G 14933994-A-G ***
18134924-C-G 16023044-C-G ***
18222766-T-A 16110886-T-A ***
18255056-C-T 16143176-C-T ***
18493397-G-A 16381517-G-A P6_Dst ***
18531111-GAAAAA-G,GAAA 16419231-GAAAAA-G,GAAA P6_Dst 19×A***
18688500-C-AA,AAA 16576620-C-AA,AAA 20×A***
19113731-AAA-G 17001851-AAA-G ***
19211447-T-C 17099567-T-C ***
19709709-CA-C,CAA 17597829-CA-C,CAA P5_Prx 29×A***
19802908-C-T 17691028-C-T P5_Prx ***
20093703-A-G 17981823-A-G P5_Dst ***
20111328-G-C 17999448-G-C P5_Dst ***
20111817-A-G 17999937-A-G P5_Dst ***
20115309-G-C 18003429-G-C P5_Dst ***
20134265-A-G 18022385-A-G P5_Dst ***
20209611-A-G 18047725-A-G P5_Dst ***
20216802-G-T 18054916-G-T P5_Dst ***
20223449-G-A 18061563-G-A P5_Dst ***
20228052-A-T 18066166-A-T P5_Dst ***
20229254-GT-G,GTT 18067368-GT-G,GTT P5_Dst 15×T***
20252796-C-A,CA 18090910-C-A,CA P5_Dst 24×A***
20288670-A-G 18126784-A-G P5_Dst ***
20325819-T-C 18163933-T-C P5_Dst ***
20422050-CA-C 18260164-CA-C P5_Dst ***
20430442-CAAA-C,CAA 18268556-CAAA-C,CAA P5_Dst 22×A***
20432626-CCAT-GC 18270740-CCAT-GC P5_Dst ***
20478953-CAA-C,CA 18317067-CAA-C,CA P5_Dst 15×A***
20490294-G-T 18328408-G-T P5_Dst ***
20495452-A-G 18333566-A-G P5_Dst ***
20503443-C-T 18341557-C-T P5_Dst ***
20524631-T-G 18362745-T-G P5_Dst ***
20566694-C-T 18404808-C-T P5_Dst ***
20861548-A-G 18699662-A-G P4_Dst ***
20865118-GGG-AGA 18703232-GGG-AGA P4_Dst ***
20865354-C-ACACA 18703468-C-ACACA P4_Dst 18×CA***
21008944-T-G 18847058-T-G P4_Dst ***
21026262-G-T 18864376-G-T P4_Dst ***
21669607-G-C 19507721-G-C ***
21945491-C-A 19783605-C-A ***
22243976-A-G 20082090-A-G DYZ19 ***
22244008-G-T 20082122-G-T DYZ19 ***
22270402-GAAGC-TAAGT 20108516-GAAGC-TAAGT DYZ19 ***
22318516-AG-CA 20156630-AG-CA DYZ19 ***
22318531-G-A 20156645-G-A DYZ19 ***
22361683-G-C 20199797-G-C DYZ19 ***
22361728-GT-TC 20199842-GT-TC DYZ19 ***
22366840-C-A 20204954-C-A DYZ19 ***
22368365-TAAGG-AAAGT 20206479-TAAGG-AAAGT DYZ19 ***
22446632-T-A,G 20284746-T-A,G DYZ19 ***
22466443-C-T 20304557-C-T DYZ19 ***
22475175-GTGA-CTGT 20313289-GTGA-CTGT DYZ19 ***
22476733-AC-GG 20314847-AC-GG DYZ19 ***
22484092-CTG-TTT 20322206-CTG-TTT DYZ19 ***
22502887-G-T 20341001-G-T DYZ19 ***
22504282-T-A 20342396-T-A DYZ19 ***
22504302-GT-TG 20342416-GT-TG DYZ19 ***
22504329-A-T 20342443-A-T DYZ19 ***
22504345-C-T 20342459-C-T DYZ19 ***
22504917-A-G 20343031-A-G DYZ19 ***
22508899-TTCAC-GTCAG 20347013-TTCAC-GTCAG DYZ19 ***
23009458-C-T 20847572-C-T ***
23318912-G-T 21157026-G-T ***
23759113-TAA-T,TA 21597227-TAA-T,TA 24×A***
21773611-T-C ***
21779961-C-A ***
21787190-A-G ***
24014595-GA-G 21868448-GA-G ***
24017525-G-T 21871378-G-T ***
24191280-A-T 22045133-A-T P3_b1 ***
24539667-T-C 22393520-T-C P3_t2 ***
24542838-GC-TT 22396691-GC-TT P3_t2 ***
24542854-C-T 22396707-C-T P3_t2 ***
24542863-ACATA-CCATG 22396716-ACATA-CCATG P3_t2 ***
24542872-G-C 22396725-G-C P3_t2 ***
24560658-T-C 22414511-T-C P3_t2 ***
24577809-G-C 22431662-G-C P3_t2 ***
24593161-G-A 22447014-G-A P3_t2 ***
24598329-T-A 22452182-T-A P3_t2 ***
24607973-A-G 22461826-A-G P3_t2 ***
24637403-CT-C,CTT 22491256-CT-C,CTT P3_t2 11×T***
24638270-T-C 22492123-T-C P3_t2 ***
24684707-T-C 22538560-T-C P3_b2 ***
24715219-T-A 22569072-T-A P3_b2 ***
24720365-T-C 22574218-T-C P3_b2 ***
24775150-A-G 22629003-A-G P3_b2 ***
24780851-C-A 22634704-C-A P3_b2 ***
24791485-T-C 22645338-T-C P3_b2 ***
25166712-ATTT-A,AT 23020565-ATTT-A,AT g1 30×T***
25356955-T-TA 23210808-T-TA P2_r2 10×A***
25436828-T-C 23290681-T-C P2_r2 ***
25449758-C-A 23303611-C-A P2_r2 ***
25495847-A-T 23349700-A-T P2_r2 ***
25504650-CTT-C,CT 23358503-CTT-C,CT P1_gr1 17×T***
25659418-T-C 23513271-T-C P1_b3 ***
25673121-G-C 23526974-G-C P1_b3 ***
25743402-T-C 23597255-T-C P1_b3 ***
25763035-A-G 23616888-A-G P1_b3 ***
26429820-CAAA-C,CAA 24283673-CAAA-C,CAA P1_Y1 27×A***
26991663-T-C 24845516-T-C P1_r4 ***
27013696-A-G 24867549-A-G P1_r4 ***
27056889-ATTTT-A,ATTT 24910742-ATTTT-A,ATTT P1_r4 19×T***
27082278-AAAGAAG-A 24936131-AAAGAAG-A P1_r4 5×AAG***
27095931-CAAA-C,CA 24949784-CAAA-C,CA P1_r4 27×A***
27122201-A-G 24976054-A-G P1_g3 ***
27132231-C-A 24986084-C-A P1_g3 ***
27134154-A-G 24988007-A-G P1_g3 ***
27135673-A-G 24989526-A-G P1_g3 ***
27149234-T-C 25003087-T-C P1_g3 ***
27167132-A-G 25020985-A-G P1_g3 ***
27172218-G-A 25026071-G-A P1_g3 ***
27188569-T-A 25042422-T-A P1_g3 ***
27197357-T-C 25051210-T-C P1_g3 ***
27201786-G-A 25055639-G-A P1_g3 ***
27221845-G-C 25075698-G-C P1_g3 ***
27223403-A-T 25077256-A-T P1_g3 ***
27242645-C-G 25096498-C-G P1_g3 ***
27293897-C-T 25147750-C-T P1_g3 ***
27298288-C-G 25152141-C-G P1_g3 ***
27361727-G-A 25215580-G-A P1_g3 ***
27369682-A-G 25223535-A-G P1_g3 ***
27375733-G-T 25229586-G-T P1_g3 ***
27376797-A-G 25230650-A-G P1_g3 ***
27386006-G-A 25239859-G-A P1_g3 ***
27397290-A-C 25251143-A-C P1_g3 ***
27437588-C-T 25291441-C-T P1_Y2 ***
27442050-C-G 25295903-C-G P1_Y2 ***
27479725-C-T 25333578-C-T P1_Y2 ***
27531360-A-G 25385213-A-G P1_Y2 ***
27539526-C-G 25393379-C-G P1_Y2 ***
27552073-G-A 25405926-G-A P1_Y2 ***
27560965-A-G 25414818-A-G P1_Y2 ***
27596715-C-A 25450568-C-A P1_Y2 ***
27602468-G-A 25456321-G-A P1_Y2 ***
27622517-G-A 25476370-G-A P1_Y2 ***
27626719-C-G 25480572-C-G P1_Y2 ***
27632433-C-G 25486286-C-G P1_Y2 ***
27655705-T-C 25509558-T-C P1_Y2 ***
27657037-T-C 25510890-T-C P1_Y2 ***
27657489-A-G 25511342-A-G P1_Y2 ***
27657912-G-C 25511765-G-C P1_Y2 ***
27659824-C-T 25513677-C-T P1_Y2 ***
27679529-G-A 25533382-G-A P1_Y2 ***
27700690-T-C 25554543-T-C P1_Y2 ***
27726047-C-T 25579900-C-T P1_Y2 ***
27727636-A-G 25581489-A-G P1_Y2 ***
27731422-T-C 25585275-T-C P1_Y2 ***
27737114-G-C 25590967-G-C P1_Y2 ***
27742012-A-G 25595865-A-G P1_Y2 ***
27760160-C-A 25614013-C-A P1_Y2 ***
27766620-G-T 25620473-G-T P1_Y2 ***
27774439-A-G 25628292-A-G P1_Y2 ***
27775967-A-G 25629820-A-G P1_Y2 ***
27789102-C-T 25642955-C-T P1_Y2 ***
27811778-A-G 25665631-A-G P1_Y2 ***
27813528-A-G 25667381-A-G P1_Y2 ***
27814588-T-C 25668441-T-C P1_Y2 ***
27815972-C-T 25669825-C-T P1_Y2 ***
27866907-TTCCT-CTCCC 25720760-TTCCT-CTCCC P1_Y2 ***
27878616-A-G 25732469-A-G P1_Y2 ***
27889230-A-G 25743083-A-G P1_Y2 ***
27899157-A-G 25753010-A-G P1_Y2 ***
27904509-T-C 25758362-T-C P1_Y2 ***
27913820-T-C 25767673-T-C P1_Y2 ***
27921481-A-G 25775334-A-G P1_Y2 ***
27945126-A-G 25798979-A-G P1_Y2 ***
27951503-A-G 25805356-A-G P1_Y2 ***
27956259-T-G 25810112-T-G P1_Y2 ***
27956492-C-A 25810345-C-A P1_Y2 ***
27962286-C-A 25816139-C-A P1_Y2 ***
27962594-A-G 25816447-A-G P1_Y2 ***
27985992-G-A 25839845-G-A P1_Y2 ***
27989247-G-C 25843100-G-C P1_Y2 ***
27990095-A-G 25843948-A-G P1_Y2 ***
27990209-C-T 25844062-C-T P1_Y2 ***
27993249-C-T 25847102-C-T P1_Y2 ***
27993378-C-T 25847231-C-T P1_Y2 ***
27997390-T-C 25851243-T-C P1_Y2 ***
28003022-A-G 25856875-A-G P1_Y2 ***
28006209-G-T 25860062-G-T P1_Y2 ***
28021484-G-T 25875337-G-T P1_Y2 ***
28029810-T-C 25883663-T-C P1_Y2 ***
28034268-G-A 25888121-G-A P1_Y2 ***
28046607-A-C 25900460-A-C P1_Y2 ***
28050931-T-C 25904784-T-C P1_Y2 ***
28051232-C-A 25905085-C-A P1_Y2 ***
28081412-A-G 25935265-A-G P1_Y2 ***
28092958-C-A 25946811-C-A P1_Y2 ***
28170922-G-GT 26024775-G-GT P1_b4 ***
28172861-T-C 26026714-T-C P1_b4 ***
28174626-A-G 26028479-A-G P1_b4 ***
28270294-C-T 26124147-C-T P1_b4 ***
28348330-A-C 26202183-A-C P1_gr2 ***
28357821-T-C 26211674-T-C P1_gr2 ***
28359520-G-A 26213373-G-A P1_gr2 ***
28359542-C-T 26213395-C-T P1_gr2 ***
28360228-A-G 26214081-A-G P1_gr2 ***
28379575-A-G 26233428-A-G P1_gr2 ***
28383274-C-G 26237127-C-G P1_gr2 ***
28386275-A-G 26240128-A-G P1_gr2 ***
28386960-T-C 26240813-T-C P1_gr2 ***
28389831-G-C 26243684-G-C P1_gr2 ***
28397350-A-G 26251203-A-G P1_gr2 ***
28404919-C-T 26258772-C-T P1_gr2 ***
28414970-C-T 26268823-C-T P1_gr2 ***
28423895-C-T 26277748-C-T P1_gr2 ***
28437857-T-C 26291710-T-C P1_gr2 ***
28621883-G-A 26475736-G-A ***
28665191-C-CAT 26519044-C-CAT ***
56828733-CCT-TGA ***
56881337-CTTA-AAAACTT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.