Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > S426 > S190 > FGC3215 > Z36747 > Y16487 > Y16486 > Y16490

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFB38
130171-A
BigY3
130171
20521454-T-C 18359568-T-C P5_Dst ***A*
18503962-A-G 16392082-A-G P6_Dst ***A*
18442391-G-A 16330511-G-A P6_Dst A*
18443227-C-T 16331347-C-T P6_Dst ***A*
18449340-G-A 16337460-G-A P6_Dst A*
18449450-A-G 16337570-A-G P6_Dst A*
18462826-T-C 16350946-T-C P6_Dst A*
18467361-T-C 16355481-T-C P6_Dst ***A*
18501771-T-G 16389891-T-G P6_Dst A*
18503966-T-C 16392086-T-C P6_Dst ***A*
16155236-T-A 14043356-T-A P8_Dst ***A*
18506632-C-A 16394752-C-A P6_Dst ***A*
18517226-G-A 16405346-G-A P6_Dst A*
18523768-T-C 16411888-T-C P6_Dst ***A*
19591956-T-C 17480076-T-C P5_Prx YA*
19919068-A-G 17807188-A-G P5_Prx A*
20232107-T-C 18070221-T-C P5_Dst A*
20245212-C-G 18083326-C-G P5_Dst ***A*
20257283-G-A 18095397-G-A P5_Dst A*
18009439-A-G 15897559-A-G P7_Dst YA*
16154892-C-T 14043012-C-T P8_Dst ***A*
20268917-A-G 18107031-A-G P5_Dst ***A*
20934177-G-C 18772291-G-C P4_Dst ***A*
20993894-A-G 18832008-A-G P4_Dst ***A*
20992814-G-T 18830928-G-T P4_Dst A*
20973446-G-T 18811560-G-T P4_Dst ***A*
20971659-T-C 18809773-T-C P4_Dst ***A*
20966121-C-A 18804235-C-A P4_Dst A*
20955316-C-A 18793430-C-A P4_Dst A*
20952432-G-A 18790546-G-A P4_Dst ***A*
20865120-G-A 18703234-G-A P4_Dst A*
20932265-C-T 18770379-C-T P4_Dst A*
20866565-T-C 18704679-T-C P4_Dst ***A*
6214996-C-T 6346955-C-T IR3_Dst *A*
20928760-G-A 18766874-G-A P4_Dst ***A*
20905672-C-T 18743786-C-T P4_Dst ***A*
20893666-T-A 18731780-T-A P4_Dst ***A*
20885734-G-A 18723848-G-A P4_Dst A*
20875196-T-C 18713310-T-C P4_Dst A*
19669013-G-A 17557133-G-A P5_Prx *A*
20871097-C-T 18709211-C-T P4_Dst ***A*
20267183-G-T 18105297-G-T P5_Dst ***A*
20288108-T-C 18126222-T-C P5_Dst A*
21010521-T-C 18848635-T-C P4_Dst Y***A*
20568002-T-C 18406116-T-C P5_Dst ***A*
20510770-T-C 18348884-T-C P5_Dst ***A*
20522069-G-A 18360183-G-A P5_Dst A*
20536505-A-G 18374619-A-G P5_Dst A*
20538916-A-G 18377030-A-G P5_Dst ***A*
20555001-A-T 18393115-A-T P5_Dst ***A*
20562754-A-T 18400868-A-T P5_Dst A*
20565319-C-A 18403433-C-A P5_Dst ***A*
20568751-C-G 18406865-C-G P5_Dst ***A*
20508323-C-G 18346437-C-G P5_Dst ***A*
20583549-G-A 18421663-G-A P5_Dst A*
20586257-T-A 18424371-T-A P5_Dst ***A*
20590490-T-C 18428604-T-C P5_Dst A*
20597448-C-CG 18435562-C-CG P5_Dst ***A*
20602874-T-G 18440988-T-G P5_Dst ***A*
20640022-C-G 18478136-C-G P4_Prx ***A*
20853380-A-G 18691494-A-G P4_Dst ***A*
20863193-C-A 18701307-C-A P4_Dst ***A*
20508767-C-T 18346881-C-T P5_Dst A*
20466887-A-G 18305001-A-G P5_Dst ***A*
20297730-A-G 18135844-A-G P5_Dst ***A*
20406002-G-A 18244116-G-A P5_Dst ***A*
20313527-A-G 18151641-A-G P5_Dst A*
20324075-G-A 18162189-G-A P5_Dst ***A*
20339956-A-G 18178070-A-G P5_Dst ***A*
20367859-G-A 18205973-G-A P5_Dst ***A*
20368630-A-G 18206744-A-G P5_Dst ***A*
20376418-C-T 18214532-C-T P5_Dst ***A*
20391900-A-G 18230014-A-G P5_Dst A*
20405997-A-G 18244111-A-G P5_Dst ***A*
20406161-A-G 18244275-A-G P5_Dst ***A*
20452413-G-A 18290527-G-A P5_Dst A*
20410393-G-A 18248507-G-A P5_Dst ***A*
20421938-C-CT 18260052-C-CT P5_Dst A*
20421945-A-C 18260059-A-C P5_Dst A*
20421946-C-T 18260060-C-T P5_Dst A*
20421956-G-A 18260070-G-A P5_Dst A*
20421958-T-C 18260072-T-C P5_Dst A*
20441126-T-C 18279240-T-C P5_Dst ***A*
20442302-C-G 18280416-C-G P5_Dst ***A*
20999190-A-G 18837304-A-G P4_Dst Y***A*
20865118-G-A 18703232-G-A P4_Dst A*
21014967-G-T 18853081-G-T P4_Dst Y***A*
21016356-T-A 18854470-T-A P4_Dst YA*
8568420-G-T 8700379-G-T YYA*
19669007-A-G 17557127-A-G P5_Prx *A*
21022307-A-G 18860421-A-G P4_Dst YA*
20865354-C-A 18703468-C-A P4_Dst 18×CAA*
6678058-C-T 6810017-C-T FT28782 YY++
7757719-C-T 7889678-C-T FT29035 YY++
8212803-T-G 8344762-T-G FT29167 YY++
23024697-A-G 20862811-A-G FT31553 YY++
21375413-A-G 19213527-A-G FT31190 YY++
6403276-ACC-TCG 6535235-ACC-TCG *
19967463-T-A,AT 17855583-T-A,AT P5_Prx *
13253393-TCGG-CCAGTTT,CCAGTTTT 11097717-TCGG-CCAGTTT,CCAGTTTT *
19757819-ATC-GTT 17645939-ATC-GTT P5_Prx *
6022206-C-T 6154165-C-T *
25662890-CAA-C,CA 23516743-CAA-C,CA P1_b3 15×A*
4439268-G-A 4571227-G-A *
26519576-C-A 24373429-C-A P1_Y1 *
18717876-TA-T,TAA 16605996-TA-T,TAA 16×A*
58980737-TTGCAT-CTCGAA 56834590-TTGCAT-CTCGAA *
19757765-C-T 17645885-C-T P5_Prx *
22487017-C-G 20325131-C-G DYZ19 *
22270509-C-G 20108623-C-G BY215007 DYZ19 *
6402331-GACGTATT-AATGTATC 6534290-GACGTATT-AATGTATC *
24302816-CAA-C,CA 22156669-CAA-C,CA P3_t1 24×A*
56841064-ATCAC-ATCAT,TTCAT *
26122000-ATT-A,AT 23975853-ATT-A,AT P1_Y1 18×T*
25016655-C-CT 22870508-C-CT g1 16×T*
20778781-T-TTG,TTGTG 18616895-T-TTG,TTGTG P4_Prx 18×TG*
13448873-TCAT-CCAC 11293197-TCAT-CCAC *
4965185-TAA-T,TAAA 5097144-TAA-T,TAAA 20×A*
4878246-C-CA,CAA 5010205-C-CA,CAA 18×A*
11013930-C-CTCCAT,T *
19757777-G-T 17645897-G-T P5_Prx *
13487755-AACC-CACA 11332079-AACC-CACA *
13451743-CCACTCCATTCCACTCCG-CCA,GCAATCCATTCCATTCCG 11296067-CCACTCCATTCCACTCCG-CCA,GCAATCCATTCCATTCCG *
27772643-TA-T 25626496-TA-T P1_Y2 21×A**
27368540-A-T 25222393-A-T P1_g3 **
20280157-TCCTTC-CTCTTT 18118271-TCCTTC-CTCTTT P5_Dst **
20345719-GT-G 18183833-GT-G P5_Dst **
16498307-T-C 14386427-T-C **
16167944-GC-G 14056064-GC-G P8_Dst 12×C**
28077604-T-G 25931457-T-G P1_Y2 **
15497999-G-T 13386119-G-T **
24646583-G-GT 22500436-G-GT P3_b2 21×T**
6639768-G-C 6771727-G-C **
25588696-T-C 23442549-T-C P1_gr1 **
20261459-G-C 18099573-G-C P5_Dst **
28448272-CA-C 26302125-CA-C P1_gr2 13×A**
27358685-A-G 25212538-A-G P1_g3 **
22493699-T-G 20331813-T-G DYZ19 **
20933166-T-C 18771280-T-C P4_Dst **
28065155-CT-C 25919008-CT-C P1_Y2 15×T**
28418662-G-A 26272515-G-A P1_gr2 **
20869021-G-TT 18707135-G-TT P4_Dst 21×T**
27167317-A-C 25021170-A-C P1_g3 **
13280040-C-CTTCCTATCT 11124364-C-CTTCCTATCT **
13483229-C-A 11327553-C-A **
20439958-GT-G 18278072-GT-G P5_Dst 16×T**
20846483-T-C 18684597-T-C P4_Dst **
8288815-TAAAA-T 8420774-TAAAA-T 23×A*****
15117412-C-G 13005499-C-G **
27492133-G-A 25345986-G-A P1_Y2 **
6133169-T-A 6265128-T-A **
27944488-A-G 25798341-A-G P1_Y2 **
14182733-C-T 12062027-C-T ****
14163223-T-C 12042517-T-C ****
13529893-C-T 11374217-C-T *****
13467741-T-C 11312065-T-C ****
9949516-T-C 10111907-T-C *****
27930873-T-A 25784726-T-A P1_Y2 **
7346596-A-G 7478555-A-G ****
13727925-G-A 11572249-G-A **
27654872-A-G 25508725-A-G P1_Y2 **
13709507-C-A 11553831-C-A **
3606127-T-C 3738086-T-C **
14739051-T-C 12627119-T-C ****
2856782-CTTTTTTTTTT-C 2988741-CTTTTTTTTTT-C 24×T****
17059114-T-C 14947234-T-C **
7095164-T-C 7227123-T-C **
27866897-AAAC-CAAG 25720750-AAAC-CAAG P1_Y2 **
21757411-GC-TA **
25963867-CT-C 23817720-CT-C P1_Y1 34×T**
13725925-A-C 11570249-A-C **
18465502-T-G 16353622-T-G P6_Dst **
10087541-GATAG-TATAT 10249932-GATAG-TATAT **
10633206-TAT-CAA 11×ATTCC**
23084574-C-T 20922688-C-T **
22856216-T-G 20694330-T-G **
24486859-G-T 22340712-G-T **
17059146-G-A 14947266-G-A **
24568091-A-G 22421944-A-G P3_t2 **
19013294-C-A 16901414-C-A ****
27492168-C-T 25346021-C-T P1_Y2 **
20302110-G-GT 18140224-G-GT P5_Dst 10×T**
24379067-A-G 22232920-A-G *****
27492196-G-C 25346049-G-C P1_Y2 **
13446531-A-AC 11290855-A-AC **
22084648-T-C 19922762-T-C ****
15188553-A-G 13076639-A-G ****
13446532-T-TCCAC 11290856-T-TCCAC **
16498582-T-C 14386702-T-C ****
16103423-A-G 13991543-A-G P8_Prx **
25449758-C-A 23303611-C-A P2_r2 ***
24775150-A-G 22629003-A-G P3_b2 ***
24637403-CT-C,CTT 22491256-CT-C,CTT P3_t2 11×T***
24638270-T-C 22492123-T-C P3_t2 ***
24684707-T-C 22538560-T-C P3_b2 ***
24715219-T-A 22569072-T-A P3_b2 ***
24720365-T-C 22574218-T-C P3_b2 ***
25763035-A-G 23616888-A-G P1_b3 ***
24780851-C-A 22634704-C-A P3_b2 ***
25743402-T-C 23597255-T-C P1_b3 ***
25436828-T-C 23290681-T-C P2_r2 ***
24791485-T-C 22645338-T-C P3_b2 ***
25673121-G-C 23526974-G-C P1_b3 ***
25659418-T-C 23513271-T-C P1_b3 ***
25504650-CTT-C,CT 23358503-CTT-C,CT P1_gr1 17×T***
25495847-A-T 23349700-A-T P2_r2 ***
25166712-ATTT-A,AT 23020565-ATTT-A,AT g1 30×T***
25356955-T-TA 23210808-T-TA P2_r2 10×A***
24607973-A-G 22461826-A-G P3_t2 ***
24577809-G-C 22431662-G-C P3_t2 ***
24598329-T-A 22452182-T-A P3_t2 ***
21945491-C-A 19783605-C-A ***
22366840-C-A 20204954-C-A DYZ19 ***
22361728-GT-TC 20199842-GT-TC DYZ19 ***
22361683-G-C 20199797-G-C DYZ19 ***
22352591-TACTTAAT-CACTTAAA,TACCTAAA 20190705-TACTTAAT-CACTTAAA,TACCTAAA DYZ19 ***
22318540-GTTTACGG-CTTCACGC 20156654-GTTTACGG-CTTCACGC DYZ19 ***
22318531-G-A 20156645-G-A DYZ19 ***
22318516-AG-CA 20156630-AG-CA DYZ19 ***
22270402-GAAGC-TAAGT 20108516-GAAGC-TAAGT DYZ19 ***
22244026-AGGAA-TGGAA,TGGAG 20082140-AGGAA-TGGAA,TGGAG DYZ19 ***
22244008-G-T 20082122-G-T DYZ19 ***
22243976-A-G 20082090-A-G DYZ19 ***
22236268-GAAGG-GATGG,TAAGA 20074382-GAAGG-GATGG,TAAGA DYZ19 ***
21669607-G-C 19507721-G-C ***
22446632-T-A,G 20284746-T-A,G DYZ19 ***
21026262-G-T 18864376-G-T P4_Dst ***
21008944-T-G 18847058-T-G P4_Dst ***
20865354-C-ACACA 18703468-C-ACACA P4_Dst 18×CA***
20865118-GGG-AGA 18703232-GGG-AGA P4_Dst ***
20861548-A-G 18699662-A-G P4_Dst ***
20566694-C-T 18404808-C-T P5_Dst ***
20524631-T-G 18362745-T-G P5_Dst ***
20503443-C-T 18341557-C-T P5_Dst ***
20495452-A-G 18333566-A-G P5_Dst ***
20490294-G-T 18328408-G-T P5_Dst ***
20478953-CAA-C,CA 18317067-CAA-C,CA P5_Dst 15×A***
20432626-CCAT-GC 18270740-CCAT-GC P5_Dst ***
22368365-TAAGG-AAAGT 20206479-TAAGG-AAAGT DYZ19 ***
22466443-C-T 20304557-C-T DYZ19 ***
24593161-G-A 22447014-G-A P3_t2 ***
21773611-T-C ***
26991663-T-C 24845516-T-C P1_r4 ***
24560658-T-C 22414511-T-C P3_t2 ***
24542872-G-C 22396725-G-C P3_t2 ***
24542863-ACATA-CCATG 22396716-ACATA-CCATG P3_t2 ***
24542854-C-T 22396707-C-T P3_t2 ***
24542838-GC-TT 22396691-GC-TT P3_t2 ***
24539667-T-C 22393520-T-C P3_t2 ***
24191280-A-T 22045133-A-T P3_b1 ***
24017525-G-T 21871378-G-T ***
24014595-GA-G 21868448-GA-G ***
21787190-A-G ***
21779961-C-A ***
23759113-TAA-T,TA 21597227-TAA-T,TA 24×A***
22475175-GTGA-CTGT 20313289-GTGA-CTGT DYZ19 ***
23318912-G-T 21157026-G-T ***
23009458-C-T 20847572-C-T ***
22508899-TTCAC-GTCAG 20347013-TTCAC-GTCAG DYZ19 ***
22504917-A-G 20343031-A-G DYZ19 ***
22504345-C-T 20342459-C-T DYZ19 ***
22504329-A-T 20342443-A-T DYZ19 ***
22504302-GT-TG 20342416-GT-TG DYZ19 ***
22504282-T-A 20342396-T-A DYZ19 ***
22502887-G-T 20341001-G-T DYZ19 ***
22502819-TAAGG-AAAGT,CAAGG 20340933-TAAGG-AAAGT,CAAGG DYZ19 ***
22484092-CTG-TTT 20322206-CTG-TTT DYZ19 ***
22476733-AC-GG 20314847-AC-GG DYZ19 ***
26429820-CAAA-C,CAA 24283673-CAAA-C,CAA P1_Y1 27×A***
22295848-C-G 20133962-C-G DYZ19 ***
27013696-A-G 24867549-A-G P1_r4 ***
27985992-G-A 25839845-G-A P1_Y2 ***
28034268-G-A 25888121-G-A P1_Y2 ***
28029810-T-C 25883663-T-C P1_Y2 ***
28021484-G-T 25875337-G-T P1_Y2 ***
28006209-G-T 25860062-G-T P1_Y2 ***
28003022-A-G 25856875-A-G P1_Y2 ***
27997390-T-C 25851243-T-C P1_Y2 ***
27993378-C-T 25847231-C-T P1_Y2 ***
27993249-C-T 25847102-C-T P1_Y2 ***
27990209-C-T 25844062-C-T P1_Y2 ***
27990095-A-G 25843948-A-G P1_Y2 ***
27989247-G-C 25843100-G-C P1_Y2 ***
27962594-A-G 25816447-A-G P1_Y2 ***
28050931-T-C 25904784-T-C P1_Y2 ***
27962286-C-A 25816139-C-A P1_Y2 ***
27956492-C-A 25810345-C-A P1_Y2 ***
27956259-T-G 25810112-T-G P1_Y2 ***
27951503-A-G 25805356-A-G P1_Y2 ***
27945126-A-G 25798979-A-G P1_Y2 ***
27921481-A-G 25775334-A-G P1_Y2 ***
27913820-T-C 25767673-T-C P1_Y2 ***
27904509-T-C 25758362-T-C P1_Y2 ***
27899157-A-G 25753010-A-G P1_Y2 ***
27889230-A-G 25743083-A-G P1_Y2 ***
27878616-A-G 25732469-A-G P1_Y2 ***
28046607-A-C 25900460-A-C P1_Y2 ***
28051232-C-A 25905085-C-A P1_Y2 ***
27815972-C-T 25669825-C-T P1_Y2 ***
28386275-A-G 26240128-A-G P1_gr2 ***
56861817-AAAAAAAAAAAAAAAAAAAAAACCTG-CAAACAAACAAACAAACAAACAAAAAAAAAAAAACCTA ***
56828733-CCT-TGA ***
28665191-C-CAT 26519044-C-CAT ***
28621883-G-A 26475736-G-A ***
28437857-T-C 26291710-T-C P1_gr2 ***
28423895-C-T 26277748-C-T P1_gr2 ***
28414970-C-T 26268823-C-T P1_gr2 ***
28404919-C-T 26258772-C-T P1_gr2 ***
28397350-A-G 26251203-A-G P1_gr2 ***
28389831-G-C 26243684-G-C P1_gr2 ***
28386960-T-C 26240813-T-C P1_gr2 ***
28383274-C-G 26237127-C-G P1_gr2 ***
28081412-A-G 25935265-A-G P1_Y2 ***
28379575-A-G 26233428-A-G P1_gr2 ***
28360228-A-G 26214081-A-G P1_gr2 ***
28359542-C-T 26213395-C-T P1_gr2 ***
28359520-G-A 26213373-G-A P1_gr2 ***
28357821-T-C 26211674-T-C P1_gr2 ***
28348330-A-C 26202183-A-C P1_gr2 ***
28270294-C-T 26124147-C-T P1_b4 ***
28174626-A-G 26028479-A-G P1_b4 ***
28172861-T-C 26026714-T-C P1_b4 ***
28170922-G-GT 26024775-G-GT P1_b4 ***
28092958-C-A 25946811-C-A P1_Y2 ***
27866907-TTCCT-CTCCC 25720760-TTCCT-CTCCC P1_Y2 ***
27814588-T-C 25668441-T-C P1_Y2 ***
27056889-ATTTT-A,ATTT 24910742-ATTTT-A,ATTT P1_r4 19×T***
27221845-G-C 25075698-G-C P1_g3 ***
27437588-C-T 25291441-C-T P1_Y2 ***
27397290-A-C 25251143-A-C P1_g3 ***
27386006-G-A 25239859-G-A P1_g3 ***
27376797-A-G 25230650-A-G P1_g3 ***
27375733-G-T 25229586-G-T P1_g3 ***
27369682-A-G 25223535-A-G P1_g3 ***
27361727-G-A 25215580-G-A P1_g3 ***
27298288-C-G 25152141-C-G P1_g3 ***
27293897-C-T 25147750-C-T P1_g3 ***
27242645-C-G 25096498-C-G P1_g3 ***
27223403-A-T 25077256-A-T P1_g3 ***
27201786-G-A 25055639-G-A P1_g3 ***
27479725-C-T 25333578-C-T P1_Y2 ***
27197357-T-C 25051210-T-C P1_g3 ***
27188569-T-A 25042422-T-A P1_g3 ***
27172218-G-A 25026071-G-A P1_g3 ***
27167132-A-G 25020985-A-G P1_g3 ***
27149234-T-C 25003087-T-C P1_g3 ***
27135673-A-G 24989526-A-G P1_g3 ***
27134154-A-G 24988007-A-G P1_g3 ***
27132231-C-A 24986084-C-A P1_g3 ***
27122201-A-G 24976054-A-G P1_g3 ***
27095931-CAAA-C,CA 24949784-CAAA-C,CA P1_r4 27×A***
27082278-AAAGAAG-A 24936131-AAAGAAG-A P1_r4 5×AAG***
27442050-C-G 25295903-C-G P1_Y2 ***
27531360-A-G 25385213-A-G P1_Y2 ***
27813528-A-G 25667381-A-G P1_Y2 ***
27700690-T-C 25554543-T-C P1_Y2 ***
27811778-A-G 25665631-A-G P1_Y2 ***
27789102-C-T 25642955-C-T P1_Y2 ***
27775967-A-G 25629820-A-G P1_Y2 ***
27774439-A-G 25628292-A-G P1_Y2 ***
27766620-G-T 25620473-G-T P1_Y2 ***
27760160-C-A 25614013-C-A P1_Y2 ***
27742012-A-G 25595865-A-G P1_Y2 ***
27737114-G-C 25590967-G-C P1_Y2 ***
27731422-T-C 25585275-T-C P1_Y2 ***
27727636-A-G 25581489-A-G P1_Y2 ***
27726047-C-T 25579900-C-T P1_Y2 ***
27679529-G-A 25533382-G-A P1_Y2 ***
27539526-C-G 25393379-C-G P1_Y2 ***
27659824-C-T 25513677-C-T P1_Y2 ***
27657912-G-C 25511765-G-C P1_Y2 ***
27657489-A-G 25511342-A-G P1_Y2 ***
27657037-T-C 25510890-T-C P1_Y2 ***
27655705-T-C 25509558-T-C P1_Y2 ***
27632433-C-G 25486286-C-G P1_Y2 ***
27626719-C-G 25480572-C-G P1_Y2 ***
27622517-G-A 25476370-G-A P1_Y2 ***
27602468-G-A 25456321-G-A P1_Y2 ***
27596715-C-A 25450568-C-A P1_Y2 ***
27560965-A-G 25414818-A-G P1_Y2 ***
27552073-G-A 25405926-G-A P1_Y2 ***
20430442-CAAA-C,CAA 18268556-CAAA-C,CAA P5_Dst 22×A***
9552797-A-G 9715188-A-G IR3_Prx ***
20422050-CA-C 18260164-CA-C P5_Dst ***
15061734-C-T 12949826-C-T ******
23597590-C-A 21435704-C-A ***
9702867-A-AAC 9865258-A-AAC IR3_Prx 19×AC***
7194626-G-GTT 7326585-G-GTT 17×T***
22259637-CA-TC 20097751-CA-TC DYZ19 ***
6521551-G-GTT 6653510-G-GTT 17×T******
13529469-T-C 11373793-T-C ***
7721318-T-C 7853277-T-C ***
5393736-GTA-G 5525695-GTA-G ******
22254818-G-A 20092932-G-A BY25029 DYZ19 ***
23802430-CT-C,CTT 21640544-CT-C,CTT 13×T***
15336707-CA-C,CAA 13224825-CA-C,CAA 20×A***
3868673-A-T 4000632-A-T ***
22476751-C-T 20314865-C-T ALK177 DYZ19 ***
18045371-C-CTT 15933491-C-CTT 18×T***
6403301-T-C 6535260-T-C ***
23034293-CT-C,CTT 20872407-CT-C,CTT 15×T******
9909120-T-C 10071511-T-C ***
17264992-A-G 15153112-A-G ******
17713850-CTT-C,CT 15601970-CTT-C,CT 23×T***
14825824-CTTTTT-C,CTTT 12713891-CTTTTT-C,CTTT 18×T***
22244016-A-G 20082130-A-G DYZ19 ***
4878246-C-CAA 5010205-C-CAA 18×A***
15151502-CAAA-C,CA 13039589-CAAA-C,CA 23×A***
20585167-TA-T 18423281-TA-T P5_Dst 13×A***
4398030-G-T 4529989-G-T ******
18589697-A-ATT 16477817-A-ATT 18×T***
9590558-C-CT 9752949-C-CT IR3_Prx 13×T***
13488775-CCTCC-ACTCG 11333099-CCTCC-ACTCG ***
13446415-CAGCC-AAGCA 11290739-CAGCC-AAGCA ***
10987184-TTCCATTCCA-ATTCATTCCT ***
13488049-GCCTGGGG-ACCCGGGT 11332373-GCCTGGGG-ACCCGGGT ***
25610504-G-GT 23464357-G-GT P1_gr1 17×T***
20432608-T-C 18270722-T-C P5_Dst ***
16098533-C-CG 13986653-C-CG P8_Prx 12×G***
13553672-GA-G 11397996-GA-G 12×A***
16973472-T-G 14861592-T-G ***
8173902-A-C 8305861-A-C ***
21182397-CTT-C,CT 19020511-CTT-C,CT 20×T***
6001981-A-C 6133940-A-C ***
28180701-C-CA 26034554-C-CA P1_b4 16×A***
22282073-GAAGC-TAAGT 20120187-GAAGC-TAAGT DYZ19 ***
22506866-G-T 20344980-G-T DYZ19 ***
23601843-G-A 21439957-G-A ******
21056382-A-G 18894496-A-G ******
17474793-T-C 15362913-T-C ******
15077933-C-T 12966023-C-T ******
14634156-T-C 12522225-T-C ******
14233424-TCC-T 12112718-TCC-T ******
8062766-A-T 8194725-A-T ******
6786911-ATTT-A,AT 6918870-ATTT-A,AT 17×T***
18738114-CT-C,CTT 16626234-CT-C,CTT 19×T***
10054290-G-A 10216681-G-A ***
9992167-CCTCCCCAC-ACTCCCCA 10154558-CCTCCCCAC-ACTCCCCA ***
3957616-T-TA 4089575-T-TA 12×A******
20574099-G-C 18412213-G-C P5_Dst ***
26094269-GT-G 23948122-GT-G P1_Y1 13×T***
27733713-CA-C 25587566-CA-C P1_Y2 26×A***
27248568-GTTT-G 25102421-GTTT-G P1_g3 18×T***
22361666-C-T 20199780-C-T DYZ19 ***
25007122-T-TA 22860975-T-TA g1 13×A***
19495818-GAC-G 17383938-GAC-G ***
13306201-G-C 11150525-G-C ***
6413389-C-T 6545348-C-T ***
5948795-C-G 6080754-C-G Z2127 ***
20574118-T-C 18412232-T-C P5_Dst ***
7325111-TTA-T 7457070-TTA-T ******
28147152-GCA-G 26001005-GCA-G P1_b4 13×CA***
22477279-A-G 20315393-A-G BY25203 DYZ19 ***
22343991-T-A 20182105-T-A DYZ19 ***
20574077-G-A 18412191-G-A P5_Dst ***
20757362-AT-A 18595476-AT-A P4_Prx 32×T***
13302551-ACAG-CCAA 11146875-ACAG-CCAA ***
27166209-G-GA 25020062-G-GA P1_g3 11×A***
9551440-GT-G 9713831-GT-G IR3_Prx 11×T***
24859198-GA-G 22713051-GA-G IR1_R 12×A***
22362482-T-C 20200596-T-C DYZ19 ***
22479232-G-A 20317346-G-A FGC8621BY2051 DYZ19 ***
20574092-AG-CT 18412206-AG-CT P5_Dst ***
9965131-A-T 10127522-A-T ***
22590601-GA-G 20428715-GA-G 8×A***
22456108-T-G 20294222-T-G DYZ19 ***
9564452-CTT-C 9726843-CTT-C IR3_Prx 14×T***
16608673-GGTGT-G 14496793-GGTGT-G 16×GT******
21411406-T-TA 19249520-T-TA 10×A***
13476260-G-A 11320584-G-A ***
56887133-GTTGTTGT-G,GTTGTTT ******
22487511-C-G 20325625-C-G DYZ19 ***
18321446-ATT-A 16209566-ATT-A P6_Prx 16×T***
22437520-T-C 20275634-T-C DYZ19 ***
22511221-C-A 20349335-C-A DYZ19 ***
13207274-CTTT-C 11051598-CTTT-C 16×T***
13273750-TGAT-GGAA 11118074-TGAT-GGAA ***
7769254-CT-C 7901213-CT-C 10×T******
19382304-G-GATT 17270424-G-GATT 7×ATT***
59030170-AAGGT-GGGGG 56884023-AAGGT-GGGGG ***
18098741-CT-C 15986861-CT-C 10×T***
27152919-T-C 25006772-T-C P1_g3 ***
22295819-C-T 20133933-C-T DYZ19 ***
13641480-CCT-AC 11485804-CCT-AC ***
22443888-T-A 20282002-T-A DYZ19 ***
9342611-T-C 9505002-T-C ***
22437469-T-C 20275583-T-C DYZ19 ***
22318601-G-A 20156715-G-A BY25070 DYZ19 ***
22318594-T-C 20156708-T-C FGC30740 DYZ19 ***
22259883-C-T 20097997-C-T DYZ19 ***
11025555-TC-AA ***
13485684-AC-G 11330008-AC-G ***
20325819-T-C 18163933-T-C P5_Dst ***
14302439-CA-T 12181733-CA-T ***
15893946-T-C 13782066-T-C ***
15748119-A-T 13636239-A-T ***
15732256-G-A 13620376-G-A ***
15409882-TA-T 13298002-TA-T 9×A***
15296621-G-T 13184720-G-T ***
15249043-G-T 13137129-G-T ***
15248209-A-G 13136295-A-G ***
14657763-A-G 12545828-A-G ***
14565187-C-G 12453387-C-G ***
14530715-C-T 12418916-C-T ***
13716466-TA-AT,TG 11560790-TA-AT,TG ***
16146478-GAAAAGAAAGAAAG-AGA,AGAAAAGAAAGAAAGAAAG 14034598-GAAAAGAAAGAAAG-AGA,AGAAAAGAAAGAAAGAAAG P8_Dst ***
13499999-G-A 11344323-G-A ***
13488484-TCAG-GCAT 11332808-TCAG-GCAT ***
13476298-GTG-CTT,GTT 11320622-GTG-CTT,GTT ***
13475676-TG-T 11320000-TG-T ***
13356612-G-A 11200936-G-A ***
13204051-GT-AC 11048375-GT-AC ***
11020596-TCTG-CTT ***
10893783-ATTCCATTCCATTCCATTCCATTCCATTCCA-GTTCCATTCCATTGAATTCCATTCCATTCCATTCCACTCCG ***
10030198-CT-C 10192589-CT-C ***
9830362-A-G 9992753-A-G ***
9731523-C-A 9893914-C-A IR3_Prx ***
16129822-G-T 14017942-G-T P8_Prx ***
16800820-T-A 14688940-T-A ***
9684431-T-C 9846822-T-C IR3_Prx ***
20093703-A-G 17981823-A-G P5_Dst ***
20288670-A-G 18126784-A-G P5_Dst ***
20252796-C-A,CA 18090910-C-A,CA P5_Dst 24×A***
20229254-GT-G,GTT 18067368-GT-G,GTT P5_Dst 15×T***
20228052-A-T 18066166-A-T P5_Dst ***
20223449-G-A 18061563-G-A P5_Dst ***
20216802-G-T 18054916-G-T P5_Dst ***
20209611-A-G 18047725-A-G P5_Dst ***
20134265-A-G 18022385-A-G P5_Dst ***
20115309-G-C 18003429-G-C P5_Dst ***
20111817-A-G 17999937-A-G P5_Dst ***
20111328-G-C 17999448-G-C P5_Dst ***
19802908-C-T 17691028-C-T P5_Prx ***
16896631-A-G 14784751-A-G ***
19709709-CA-C,CAA 17597829-CA-C,CAA P5_Prx 29×A***
19211447-T-C 17099567-T-C ***
19113731-AAA-G 17001851-AAA-G ***
18688500-C-AA,AAA 16576620-C-AA,AAA 20×A***
18531111-GAAAAA-G,GAAA 16419231-GAAAAA-G,GAAA P6_Dst 19×A***
18493397-G-A 16381517-G-A P6_Dst ***
18255056-C-T 16143176-C-T ***
18222766-T-A 16110886-T-A ***
18134924-C-G 16023044-C-G ***
17045874-A-G 14933994-A-G ***
16968150-CAA-C,CA 14856270-CAA-C,CA 26×A***
9717115-C-T 9879506-C-T IR3_Prx ***
9670680-A-G 9833071-A-G IR3_Prx ***
13611374-CT-TC 11455698-CT-TC ***
22510449-TT-GG 20348563-TT-GG DYZ19 ***
7123124-C-T 7255083-C-T ***
7003407-CAT-AAC 7135366-CAT-AAC ***
5683555-AT-CC 5815514-AT-CC ***
4807246-CTTTA-ATTT,CTTTAA 4939205-CTTTA-ATTT,CTTTAA ***
3758894-T-C 3890853-T-C ***
3374847-CAA-C,CA 3506806-CAA-C,CA 23×A***
3205858-CA-C,CAAA 3337817-CA-C,CAAA 15×A***
2813042-T-A 2945001-T-A ***
28416289-CA-C 26270142-CA-C P1_gr2 ***
22259765-AG-TA 20097879-AG-TA DYZ19 ***
27467496-G-A 25321349-G-A P1_Y2 ***
7123143-G-A 7255102-G-A ***
26523585-CAAA-C 24377438-CAAA-C P1_Y1 20×A***
24837250-G-GT 22691103-G-GT P3_b2 17×T***
28430001-C-T 26283854-C-T P1_gr2 ***
28383241-A-G 26237094-A-G P1_gr2 ***
28350730-T-C 26204583-T-C P1_gr2 ***
28391647-CT-C 26245500-CT-C P1_gr2 13×T***
27548197-CT-C 25402050-CT-C P1_Y2 11×T***
22479296-CC-GT 20317410-CC-GT DYZ19 ***
20441979-G-C 18280093-G-C P5_Dst ***
19744991-ATT-A,AT 17633111-ATT-A,AT P5_Prx 23×T***
13488092-GCC-CCT 11332416-GCC-CCT ***
7123138-G-A 7255097-G-A ***
7123150-T-A 7255109-T-A ***
9666292-A-G 9828683-A-G IR3_Prx ***
9542928-T-C 9705319-T-C IR3_Prx ***
9665386-G-A 9827777-G-A IR3_Prx ***
9637920-T-C 9800311-T-C IR3_Prx ***
9626494-T-C 9788885-T-C IR3_Prx ***
9615417-A-G 9777808-A-G IR3_Prx ***
9613768-C-A 9776159-C-A IR3_Prx ***
9610343-G-C 9772734-G-C IR3_Prx ***
9606799-G-A 9769190-G-A IR3_Prx ***
9604272-A-G 9766663-A-G IR3_Prx ***
9568460-G-T 9730851-G-T IR3_Prx ***
9567070-CT-C 9729461-CT-C IR3_Prx ***
24866990-AT-A 22720843-AT-A IR1_R 11×T***
9532409-G-C 9694800-G-C IR3_Prx ***
7123157-GCCTG-TCCTT 7255116-GCCTG-TCCTT ***
9530430-G-A 9692821-G-A IR3_Prx ***
9240049-TG-CA 9402440-TG-CA ***
8389569-CTTTTTTTT-C 8521528-CTTTTTTTT-C 25×T***
7976323-G-A 8108282-G-A ***
7717586-T-TTTCCC,TTTCCT 7849545-T-TTTCCC,TTTCCT ***
7483638-TAA-T,TA 7615597-TAA-T,TA IR1_L 23×A***
7442723-C-A 7574682-C-A ***
7442671-C-T 7574630-C-T ***
7233314-AGTAGAATAT-GTAGAATAA,GTAGAATAT 7365273-AGTAGAATAT-GTAGAATAA,GTAGAATAT ***
7217231-G-T 7349190-G-T ***
7207378-T-C 7339337-T-C ***
56881337-CTTA-AAAACTT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 1301711480967792836508255199
Kit: 130171-A*16000000100000008300000
Used in age calculations1480967792836508255199
Counts of SNPs136
Variant counts last updated 2020-02-01 03:10:00.

* BED data not available. Using default values.


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