Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > S426 > S190 > FGC3215 > FGC3216 > FGC3197 > Y82590 > BY73349

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFB38
B242783-A
BigY3
B242783
hg19:Y:16114653-A-T hg38:Y:14002773-A-T P8_Prx A*
hg19:Y:16149174-G-T hg38:Y:14037294-G-T P8_Dst ***A*
hg19:Y:16161625-C-T hg38:Y:14049745-C-T P8_Dst ***A*
hg19:Y:16169680-G-T hg38:Y:14057800-G-T P8_Dst YA*
hg19:Y:18010698-G-A hg38:Y:15898818-G-A P7_Dst YA*
hg19:Y:18433158-A-G hg38:Y:16321278-A-G P6_Dst A*
hg19:Y:18506521-T-TA hg38:Y:16394641-T-TA P6_Dst 9×AA*
hg19:Y:18511674-C-T hg38:Y:16399794-C-T P6_Dst ***A*
hg19:Y:18535327-T-C hg38:Y:16423447-T-C P6_Dst A*
hg19:Y:20058891-A-G hg38:Y:17947011-A-G P5_Prx A*
hg19:Y:20058902-G-A hg38:Y:17947022-G-A P5_Prx A*
hg19:Y:20067590-A-T hg38:Y:17955710-A-T P5_Dst A*
hg19:Y:20091281-G-A hg38:Y:17979401-G-A P5_Dst ***A*
hg19:Y:20223076-A-T hg38:Y:18061190-A-T P5_Dst ***A*
hg19:Y:20259968-A-G hg38:Y:18098082-A-G P5_Dst A*
hg19:Y:20273139-A-G hg38:Y:18111253-A-G P5_Dst A*
hg19:Y:20278235-T-C hg38:Y:18116349-T-C P5_Dst A*
hg19:Y:20283669-G-A hg38:Y:18121783-G-A P5_Dst ***A*
hg19:Y:20305344-T-A hg38:Y:18143458-T-A P5_Dst A*
hg19:Y:20310054-G-A hg38:Y:18148168-G-A P5_Dst ***A*
hg19:Y:20328398-T-A hg38:Y:18166512-T-A P5_Dst A*
hg19:Y:20331411-A-T hg38:Y:18169525-A-T P5_Dst A*
hg19:Y:20338525-A-G hg38:Y:18176639-A-G P5_Dst ***A*
hg19:Y:20341156-A-G hg38:Y:18179270-A-G P5_Dst A*
hg19:Y:20366200-A-G hg38:Y:18204314-A-G P5_Dst ***A*
hg19:Y:20388084-T-C hg38:Y:18226198-T-C P5_Dst ***A*
hg19:Y:20410600-T-C hg38:Y:18248714-T-C P5_Dst ***A*
hg19:Y:20412546-G-A hg38:Y:18250660-G-A P5_Dst A*
hg19:Y:20418212-C-T hg38:Y:18256326-C-T P5_Dst A*
hg19:Y:20419217-C-T hg38:Y:18257331-C-T P5_Dst A*
hg19:Y:20445977-C-A hg38:Y:18284091-C-A P5_Dst A*
hg19:Y:20446253-A-C hg38:Y:18284367-A-C P5_Dst A*
hg19:Y:20466171-T-C hg38:Y:18304285-T-C P5_Dst ***A*
hg19:Y:20480294-G-A hg38:Y:18318408-G-A P5_Dst A*
hg19:Y:20482692-A-G hg38:Y:18320806-A-G P5_Dst ***A*
hg19:Y:20483188-C-T hg38:Y:18321302-C-T P5_Dst A*
hg19:Y:20483194-C-T hg38:Y:18321308-C-T P5_Dst A*
hg19:Y:20484207-G-A hg38:Y:18322321-G-A P5_Dst A*
hg19:Y:20484208-G-A hg38:Y:18322322-G-A P5_Dst A*
hg19:Y:20509137-C-T hg38:Y:18347251-C-T P5_Dst A*
hg19:Y:20509139-C-T hg38:Y:18347253-C-T P5_Dst A*
hg19:Y:20509144-C-T hg38:Y:18347258-C-T P5_Dst A*
hg19:Y:20522382-A-G hg38:Y:18360496-A-G P5_Dst A*
hg19:Y:20524549-T-C hg38:Y:18362663-T-C P5_Dst A*
hg19:Y:20537072-C-T hg38:Y:18375186-C-T P5_Dst ***A*
hg19:Y:20550583-A-G hg38:Y:18388697-A-G P5_Dst A*
hg19:Y:20553646-G-A hg38:Y:18391760-G-A P5_Dst ***A*
hg19:Y:20553659-G-A hg38:Y:18391773-G-A P5_Dst ***A*
hg19:Y:20554869-G-A hg38:Y:18392983-G-A P5_Dst ***A*
hg19:Y:20588323-T-C hg38:Y:18426437-T-C P5_Dst ***A*
hg19:Y:20843120-C-T hg38:Y:18681234-C-T P4_Dst A*
hg19:Y:20843611-A-T hg38:Y:18681725-A-T P4_Dst A*
hg19:Y:20851912-G-A hg38:Y:18690026-G-A P4_Dst A*
hg19:Y:20851916-G-A hg38:Y:18690030-G-A P4_Dst A*
hg19:Y:20851953-G-A hg38:Y:18690067-G-A P4_Dst A*
hg19:Y:20851955-G-A hg38:Y:18690069-G-A P4_Dst A*
hg19:Y:20851959-G-A hg38:Y:18690073-G-A P4_Dst A*
hg19:Y:20851963-G-A hg38:Y:18690077-G-A P4_Dst A*
hg19:Y:20854647-G-A hg38:Y:18692761-G-A P4_Dst ***A*
hg19:Y:20862415-T-C hg38:Y:18700529-T-C P4_Dst ***A*
hg19:Y:20890069-A-G hg38:Y:18728183-A-G P4_Dst ***A*
hg19:Y:20891626-G-A hg38:Y:18729740-G-A P4_Dst ***A*
hg19:Y:20898183-G-A hg38:Y:18736297-G-A P4_Dst ***A*
hg19:Y:20898192-G-A hg38:Y:18736306-G-A P4_Dst ***A*
hg19:Y:20898228-G-A hg38:Y:18736342-G-A P4_Dst A*
hg19:Y:20901439-C-T hg38:Y:18739553-C-T P4_Dst ***A*
hg19:Y:20904826-T-TA hg38:Y:18742940-T-TA P4_Dst 9×AA*
hg19:Y:20915249-G-A hg38:Y:18753363-G-A P4_Dst A*
hg19:Y:20918930-G-A hg38:Y:18757044-G-A P4_Dst A*
hg19:Y:20926863-C-T hg38:Y:18764977-C-T P4_Dst A*
hg19:Y:20937851-T-C hg38:Y:18775965-T-C P4_Dst A*
hg19:Y:20941951-A-G hg38:Y:18780065-A-G P4_Dst ***A*
hg19:Y:20963682-C-A hg38:Y:18801796-C-A P4_Dst A*
hg19:Y:20963789-G-T hg38:Y:18801903-G-T P4_Dst A*
hg19:Y:20965886-A-T hg38:Y:18804000-A-T P4_Dst A*
hg19:Y:20977357-A-G hg38:Y:18815471-A-G P4_Dst ***A*
hg19:Y:20983048-G-A hg38:Y:18821162-G-A P4_Dst ***A*
hg19:Y:20990889-T-C hg38:Y:18829003-T-C P4_Dst ***A*
hg19:Y:21007722-C-T hg38:Y:18845836-C-T P4_Dst Y***A*
hg19:Y:21027716-A-G hg38:Y:18865830-A-G P4_Dst YA*
hg19:Y:13448162-TTCCAG-CTCCAC hg38:Y:11292486-TTCCAG-CTCCAC +
hg38:Y:11665428-T-C FT450888 DYZ17 ++
hg19:Y:9327706-CTG-C hg38:Y:9490097-CTG-C 8×TG*
hg19:Y:13706867-T-A hg38:Y:11551191-T-A BY49946 DYZ17 *
hg19:Y:59019088-CGCG-TGCC hg38:Y:56872941-CGCG-TGCC *
hg38:Y:10691942-C-G *
hg19:Y:19987682-G-GT hg38:Y:17875802-G-GT P5_Prx 15×T*
hg38:Y:56825755-ATATATATATGG-GA *
hg38:Y:10789398-TGCA-CTCT *
hg38:Y:10789411-ATTGCATT-CTTCCACA *
hg19:Y:9984886-AAT-TAG hg38:Y:10147277-AAT-TAG *
hg38:Y:10693705-GTTCCGTTG-ATTGCGTTT *
hg19:Y:13447040-GTA-ATC hg38:Y:11291364-GTA-ATC *
hg19:Y:13447645-GCTCCACTCCACTCC-ATTCCACTCCACTCT hg38:Y:11291969-GCTCCACTCCACTCC-ATTCCACTCCACTCT 4×CTCCA*
hg19:Y:13448322-TTCCAG-CTCCAC,TTCCAC hg38:Y:11292646-TTCCAG-CTCCAC,TTCCAC *
hg19:Y:13448358-CCT-CC,TCT hg38:Y:11292682-CCT-CC,TCT *
hg19:Y:13448943-GCACGA-CCACGC,CGACGC hg38:Y:11293267-GCACGA-CCACGC,CGACGC *
hg19:Y:13449753-CAACCCCATTCTATTC-AAACCCCATTCCATTG,AAGCCCCATTCCATTC hg38:Y:11294077-CAACCCCATTCTATTC-AAACCCCATTCCATTG,AAGCCCCATTCCATTC *
hg19:Y:13450521-CTTCACTCCAC-ATCCATCCCAT,CTCCAC hg38:Y:11294845-CTTCACTCCAC-ATCCATCCCAT,CTCCAC *
hg19:Y:13451679-TACTTCAT-AACTCCAT,GACTCCAA hg38:Y:11296003-TACTTCAT-AACTCCAT,GACTCCAA *
hg19:Y:13535693-GTGTGTGTACATAC-ATAT,GTGTGTGTATAT hg38:Y:11380017-GTGTGTGTACATAC-ATAT,GTGTGTGTATAT *
hg38:Y:56831992-GCACTCCACTG-CCACTCAACTA,CCACTCCACTG *
hg38:Y:56855234-ATAAAAAAAAAG-TTAAAAAAAA *
hg38:Y:56861817-AAAAAAAAAAAAAAAAAAAAAACCTG-AAAAAAAAAAAAACCTA,CAAACAAACAAACAAACAAACAAACAAAAAAAACCTA *
hg38:Y:56879318-A-AGA,AGG *
hg19:Y:22811008-CA-TG hg38:Y:20649122-CA-TG *
hg19:Y:9340761-ACC-A,ACACACC hg38:Y:9503152-ACC-A,ACACACC *
hg19:Y:19790172-GAA-G hg38:Y:17678292-GAA-G P5_Prx 15×A*
hg19:Y:22502688-GCACG-CCACT,GCCCT hg38:Y:20340802-GCACG-CCACT,GCCCT DYZ19 *
hg19:Y:22506732-GTCCG-ATCCA,GTCCA hg38:Y:20344846-GTCCG-ATCCA,GTCCA DYZ19 *
hg19:Y:22361071-CTA-AG hg38:Y:20199185-CTA-AG DYZ19 **
hg19:Y:22337705-A-C hg38:Y:20175819-A-C DYZ19 **
hg19:Y:22330091-A-T hg38:Y:20168205-A-T DYZ19 **
hg19:Y:20587808-AAT-A hg38:Y:18425922-AAT-A P5_Dst 10×AT**
hg19:Y:19210017-C-G hg38:Y:17098137-C-G **
hg19:Y:20385533-A-G hg38:Y:18223647-A-G FGC61340 P5_Dst **
hg19:Y:27616494-C-CT hg38:Y:25470347-C-CT P1_Y2 9×T**
hg19:Y:13726727-T-C hg38:Y:11571051-T-C DYZ17 **
hg19:Y:22311524-C-G hg38:Y:20149638-C-G DYZ19 **
hg19:Y:4431198-T-A hg38:Y:4563157-T-A **
hg19:Y:4431199-T-G hg38:Y:4563158-T-G **
hg19:Y:4431200-G-T hg38:Y:4563159-G-T **
hg19:Y:13726423-CAAAAT-TTAAAA hg38:Y:11570747-CAAAAT-TTAAAA DYZ17 **
hg19:Y:24597813-C-CT hg38:Y:22451666-C-CT P3_t2 22×T**
hg19:Y:13453333-C-T hg38:Y:11297657-C-T **
hg19:Y:13453344-CAT-C hg38:Y:11297668-CAT-C **
hg19:Y:13453348-C-CTG hg38:Y:11297672-C-CTG **
hg19:Y:26421473-GCT-G hg38:Y:24275326-GCT-G P1_Y1 **
hg19:Y:13726354-C-T hg38:Y:11570678-C-T DYZ17 **
hg19:Y:18511195-C-A hg38:Y:16399315-C-A P6_Dst 30×A**
hg19:Y:20654981-AATATATATAT-A hg38:Y:18493095-AATATATATAT-A P4_Prx 21×AT**
hg19:Y:3062269-G-A hg38:Y:3194228-G-A **
hg19:Y:18734469-C-T hg38:Y:16622589-C-T ****
hg19:Y:22295627-G-T hg38:Y:20133741-G-T DYZ19 **
hg19:Y:26199619-G-A hg38:Y:24053472-G-A P1_Y1 **
hg19:Y:13726739-C-T hg38:Y:11571063-C-T DYZ17 **
hg19:Y:27412865-A-ATG hg38:Y:25266718-A-ATG P1_g3 17×TG**
hg19:Y:28345690-T-TAC hg38:Y:26199543-T-TAC P1_gr2 19×AC**
hg19:Y:6948088-GTTTG-TTTT hg38:Y:7080047-GTTTG-TTTT **
hg19:Y:13704762-G-T hg38:Y:11549086-G-T DYZ17 **
hg19:Y:13708396-G-T hg38:Y:11552720-G-T DYZ17 **
hg19:Y:13710266-GTAG-ATAT hg38:Y:11554590-GTAG-ATAT DYZ17 **
hg19:Y:14119783-CC-TT hg38:Y:11999077-CC-TT **
hg38:Y:12372008-T-C **
hg19:Y:17268868-C-T hg38:Y:15156988-C-T **
hg19:Y:28791103-TCA-GTG hg38:Y:26644956-TCA-GTG **
hg19:Y:27129870-CA-C hg38:Y:24983723-CA-C P1_g3 16×A**
hg19:Y:8176336-A-G hg38:Y:8308295-A-G **
hg19:Y:9729369-G-A hg38:Y:9891760-G-A IR3_Prx **
hg19:Y:16498193-A-C hg38:Y:14386313-A-C **
hg19:Y:18477490-T-C hg38:Y:16365610-T-C P6_Dst **
hg19:Y:19084172-C-A hg38:Y:16972292-C-A **
hg19:Y:20399536-GAG-AAA hg38:Y:18237650-GAG-AAA P5_Dst **
hg19:Y:20549962-C-T hg38:Y:18388076-C-T P5_Dst **
hg19:Y:20637578-G-GATAT hg38:Y:18475692-G-GATAT P4_Prx 25×AT**
hg19:Y:20928597-A-G hg38:Y:18766711-A-G P4_Dst **
hg19:Y:21198846-C-A hg38:Y:19036960-C-A **
hg19:Y:21198856-G-C hg38:Y:19036970-G-C **
hg19:Y:24562264-C-G hg38:Y:22416117-C-G P3_t2 **
hg19:Y:24621589-T-C hg38:Y:22475442-T-C P3_t2 **
hg19:Y:24895923-C-T hg38:Y:22749776-C-T g1 **
hg19:Y:24919995-G-A hg38:Y:22773848-G-A g1 **
hg19:Y:24920011-G-A hg38:Y:22773864-G-A g1 **
hg19:Y:25240847-G-A hg38:Y:23094700-G-A P2_r1 **
hg19:Y:25781006-G-T hg38:Y:23634859-G-T P1_b3 **
hg19:Y:26228681-CTTTCTTTC-ATTTATTTA hg38:Y:24082534-CTTTCTTTC-ATTTATTTA P1_Y1 **
hg19:Y:26540623-CT-C hg38:Y:24394476-CT-C P1_g2 16×T**
hg19:Y:27243496-A-G hg38:Y:25097349-A-G P1_g3 **
hg19:Y:27283010-G-A hg38:Y:25136863-G-A P1_g3 **
hg19:Y:27283020-G-A hg38:Y:25136873-G-A P1_g3 **
hg19:Y:27283043-G-A hg38:Y:25136896-G-A P1_g3 **
hg19:Y:27501961-G-T hg38:Y:25355814-G-T P1_Y2 **
hg19:Y:27528876-T-A hg38:Y:25382729-T-A P1_Y2 **
hg19:Y:27589805-TTGGTAGCTTGA-T hg38:Y:25443658-TTGGTAGCTTGA-T P1_Y2 **
hg19:Y:27844566-TGGTC-GGTA hg38:Y:25698419-TGGTC-GGTA P1_Y2 **
hg19:Y:27997468-CAA-C hg38:Y:25851321-CAA-C P1_Y2 23×A**
hg19:Y:28349495-C-G hg38:Y:26203348-C-G P1_gr2 **
hg19:Y:28349513-C-T hg38:Y:26203366-C-T P1_gr2 **
hg19:Y:28366218-T-A hg38:Y:26220071-T-A P1_gr2 **
hg19:Y:28369397-AGC-GGT hg38:Y:26223250-AGC-GGT P1_gr2 **
hg19:Y:28403603-C-T hg38:Y:26257456-C-T P1_gr2 **
hg19:Y:28422559-G-T hg38:Y:26276412-G-T P1_gr2 **
hg19:Y:28422624-C-T hg38:Y:26276477-C-T P1_gr2 **
hg19:Y:28440195-C-T hg38:Y:26294048-C-T P1_gr2 **
hg19:Y:28445693-C-A hg38:Y:26299546-C-A P1_gr2 **
hg19:Y:28449163-AT-A hg38:Y:26303016-AT-A P1_gr2 12×T**
hg19:Y:28449408-C-T hg38:Y:26303261-C-T P1_gr2 **
hg19:Y:28452427-A-C hg38:Y:26306280-A-C P1_gr2 **
hg38:Y:56858328-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAAGAAAGAAAAGAAAGAAAGA-AGAAAGAAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAAGAAAGAAAGAAAAGAAAGAAAAGAAAGAAAG **
hg19:Y:27781145-AT-A hg38:Y:25634998-AT-A P1_Y2 10×T***
hg19:Y:20991160-AT-A hg38:Y:18829274-AT-A P4_Dst 18×T***
hg19:Y:22489844-G-T hg38:Y:20327958-G-T DYZ19 ***
hg19:Y:27421234-A-G hg38:Y:25275087-A-G P1_g3 ***
hg19:Y:13479082-C-A hg38:Y:11323406-C-A ***
hg19:Y:20337720-AT-A hg38:Y:18175834-AT-A P5_Dst 9×T***
hg19:Y:22451050-T-C hg38:Y:20289164-T-C DYZ19 ***
hg19:Y:22364782-C-A hg38:Y:20202896-C-A DYZ19 ***
hg19:Y:22359302-A-T hg38:Y:20197416-A-T DYZ19 ***
hg19:Y:27173659-G-GA hg38:Y:25027512-G-GA P1_g3 13×A***
hg19:Y:22454336-C-A hg38:Y:20292450-C-A DYZ19 ***
hg19:Y:9232958-C-G hg38:Y:9395349-C-G ***
hg19:Y:9355440-A-G hg38:Y:9517831-A-G ***
hg19:Y:27414820-C-T hg38:Y:25268673-C-T P1_g3 ***
hg19:Y:22242849-A-G hg38:Y:20080963-A-G BY28138 DYZ19 ***
hg19:Y:22484716-T-A hg38:Y:20322830-T-A K624 DYZ19 ***
hg19:Y:22490515-G-A hg38:Y:20328629-G-A DYZ19 ***
hg19:Y:27357557-T-TA hg38:Y:25211410-T-TA P1_g3 14×A***
hg19:Y:26046002-CT-C hg38:Y:23899855-CT-C P1_Y1 13×T***
hg19:Y:20086349-T-TA hg38:Y:17974469-T-TA P5_Dst 10×A***
hg19:Y:24577878-CA-C hg38:Y:22431731-CA-C P3_t2 25×A***
hg19:Y:22503236-C-A hg38:Y:20341350-C-A DYZ19 ***
hg19:Y:22237712-ACT-GTA hg38:Y:20075826-ACT-GTA DYZ19 ***
hg19:Y:22429245-AGTA-GGTC hg38:Y:20267359-AGTA-GGTC DYZ19 ***
hg19:Y:28366313-G-A hg38:Y:26220166-G-A P1_gr2 ***
hg19:Y:13977154-GTC-ATG hg38:Y:11856448-GTC-ATG ***
hg19:Y:59012707-TG-GT hg38:Y:56866560-TG-GT ***
hg19:Y:27397108-A-AT hg38:Y:25250961-A-AT P1_g3 10×T***
hg19:Y:16298639-CT-C hg38:Y:14186759-CT-C 9×T***
hg19:Y:5257534-A-AT hg38:Y:5389493-A-AT 10×T***
hg19:Y:27809848-G-A hg38:Y:25663701-G-A P1_Y2 ***
hg19:Y:9403521-GT-G,GTT hg38:Y:9565912-GT-G,GTT 21×T***
hg19:Y:15151502-CAA-C,CA hg38:Y:13039589-CAA-C,CA 23×A***
hg19:Y:9932055-T-G hg38:Y:10094446-T-G ***
hg19:Y:22256043-C-A hg38:Y:20094157-C-A DYZ19 ***
hg19:Y:20774922-GAAA-G hg38:Y:18613036-GAAA-G P4_Prx 22×A***
hg19:Y:13850557-A-C hg38:Y:11729851-A-C FT286238 DYZ17 ***
hg19:Y:4307641-A-AT hg38:Y:4439600-A-AT 10×T***
hg19:Y:13455776-G-A hg38:Y:11300100-G-A ***
hg19:Y:17046715-GT-G,GTT hg38:Y:14934835-GT-G,GTT 25×T***
hg19:Y:5147441-CAAA-C,CAA hg38:Y:5279400-CAAA-C,CAA 30×A***
hg19:Y:8692608-A-C hg38:Y:8824567-A-C ***
hg19:Y:13222482-A-G hg38:Y:11066806-A-G ***
hg19:Y:13222487-A-G hg38:Y:11066811-A-G FT441195 ***
hg19:Y:13304158-T-C hg38:Y:11148482-T-C ***
hg38:Y:12308680-T-TTA,TTATATA 14×TA***
hg19:Y:14795058-G-T hg38:Y:12683129-G-T ***
hg19:Y:16305744-T-A hg38:Y:14193864-T-A ***
hg19:Y:20815408-CATATATATAT-C,CATATATATATATAT hg38:Y:18653522-CATATATATAT-C,CATATATATATATAT P4_Gap 22×AT***
hg19:Y:22853770-C-T hg38:Y:20691884-C-T ***
hg19:Y:22962008-GTTTT-G,GTTTTT hg38:Y:20800122-GTTTT-G,GTTTTT 27×T***
hg19:Y:22490195-T-G hg38:Y:20328309-T-G DYZ19 ***
hg19:Y:13728215-G-A hg38:Y:11572539-G-A DYZ17 ***
hg19:Y:27242386-G-T hg38:Y:25096239-G-T P1_g3 ***
hg19:Y:20567560-AAT-A hg38:Y:18405674-AAT-A P5_Dst 9×AT***
hg19:Y:18365541-A-ATG hg38:Y:16253661-A-ATG P6_Prx 20×TG***
hg19:Y:27494909-T-G hg38:Y:25348762-T-G P1_Y2 ***
hg19:Y:4505414-ATT-A,AT hg38:Y:4637373-ATT-A,AT 22×T***
hg38:Y:10624514-TCG-CCA ***
hg19:Y:13461829-GGCA-TTCG hg38:Y:11306153-GGCA-TTCG ***
hg38:Y:9057380-TTGT-A ***
hg19:Y:13204215-ATGGTGATGGTGATGA-GTGG hg38:Y:11048539-ATGGTGATGGTGATGA-GTGG ***
hg38:Y:10669466-TTCCA-CTCCT ***
hg19:Y:13487357-TAA-CAC hg38:Y:11331681-TAA-CAC ***
hg19:Y:3720173-ACCCG-CTCTT hg38:Y:3852132-ACCCG-CTCTT ***
hg19:Y:4973668-CAA-C,CA hg38:Y:5105627-CAA-C,CA 19×A***
hg19:Y:8100637-CAAA-C,CAA hg38:Y:8232596-CAAA-C,CAA 37×A***
hg38:Y:10624485-G-AT ***
hg38:Y:10678578-CAA-AAT ***
hg38:Y:10683323-ATTTCTTTCGAC-CTATCTTTTGAA ***
hg38:Y:10693693-CTTC-TTTA ***
hg38:Y:11034826-GTCCATTG-CTCCATTC ***
hg19:Y:13348249-G-A hg38:Y:11192573-G-A ***
hg19:Y:13470444-TCTGCG-CCTGTT hg38:Y:11314768-TCTGCG-CCTGTT ***
hg19:Y:13471196-TGCTC-AGCTA hg38:Y:11315520-TGCTC-AGCTA ***
hg19:Y:13488299-GGACCGCG-AGACTGCT hg38:Y:11332623-GGACCGCG-AGACTGCT ***
hg19:Y:13488370-GCC-ACT hg38:Y:11332694-GCC-ACT ***
hg19:Y:13488944-GCAGGGGTT-CCTGGGGTC hg38:Y:11333268-GCAGGGGTT-CCTGGGGTC ***
hg19:Y:13489804-CCC-ACT hg38:Y:11334128-CCC-ACT ***
hg19:Y:13504673-CAC-TGT hg38:Y:11348997-CAC-TGT ***
hg19:Y:14071348-ACCCGACTT-TCCTGAC,TCCTGACTT hg38:Y:11950642-ACCCGACTT-TCCTGAC,TCCTGACTT ***
hg19:Y:17301238-CAAA-C,CA hg38:Y:15189358-CAAA-C,CA 23×A***
hg19:Y:18688500-C-AAA hg38:Y:16576620-C-AAA 20×A***
hg19:Y:20815408-CATAT-C,CAT hg38:Y:18653522-CATAT-C,CAT P4_Gap 22×AT***
hg19:Y:21838971-G-GA,GAA hg38:Y:19677085-G-GA,GAA 20×A***
hg38:Y:21753665-TG-CA ***
hg19:Y:28797106-GAATG-TAATT hg38:Y:26650959-GAATG-TAATT ***
hg38:Y:56828308-CAAATCA-CCATTCC,TGATTCT ***
hg38:Y:56828330-ATTCC-ATTCTTTGCA,TTGCA ***
hg38:Y:56829155-TTTCGAGTCCA-ATTCGAGTCCG ***
hg38:Y:56867493-TTTTTTTT-ATA ***
hg19:Y:24681832-T-C hg38:Y:22535685-T-C P3_b2 ***
hg19:Y:28343290-A-G hg38:Y:26197143-A-G P1_gr2 ***
hg19:Y:28351165-G-A hg38:Y:26205018-G-A P1_gr2 ***
hg19:Y:28381085-T-C hg38:Y:26234938-T-C P1_gr2 ***
hg19:Y:6401942-ATCGCTGTTA-GTCGCTGTCG hg38:Y:6533901-ATCGCTGTTA-GTCGCTGTCG ***
hg19:Y:7059312-G-A hg38:Y:7191271-G-A ***
hg19:Y:8006935-GG-AA hg38:Y:8138894-GG-AA ***
hg19:Y:9218496-CTG-C hg38:Y:9380887-CTG-C 8×TG***
hg19:Y:9527769-C-T hg38:Y:9690160-C-T ***
hg19:Y:9530936-AT-A hg38:Y:9693327-AT-A IR3_Prx ***
hg19:Y:9531142-C-A hg38:Y:9693533-C-A IR3_Prx ***
hg19:Y:9534724-A-G hg38:Y:9697115-A-G IR3_Prx ***
hg19:Y:9564029-A-T hg38:Y:9726420-A-T IR3_Prx ***
hg19:Y:9599136-T-G hg38:Y:9761527-T-G IR3_Prx ***
hg19:Y:9620962-C-T hg38:Y:9783353-C-T IR3_Prx ***
hg19:Y:9670439-T-C hg38:Y:9832830-T-C IR3_Prx ***
hg19:Y:9698956-C-T hg38:Y:9861347-C-T IR3_Prx ***
hg19:Y:9729119-G-C hg38:Y:9891510-G-C IR3_Prx ***
hg19:Y:18378959-C-A hg38:Y:16267079-C-A P6_Prx 28×T***
hg19:Y:18501106-C-A hg38:Y:16389226-C-A P6_Dst ***
hg19:Y:18509525-A-C hg38:Y:16397645-A-C P6_Dst ***
hg19:Y:19652904-A-G hg38:Y:17541024-A-G P5_Prx ***
hg19:Y:19695012-AT-A hg38:Y:17583132-AT-A P5_Prx 23×T***
hg19:Y:20010762-C-T hg38:Y:17898882-C-T P5_Prx ***
hg19:Y:20084810-C-A hg38:Y:17972930-C-A P5_Dst ***
hg19:Y:20092207-A-C hg38:Y:17980327-A-C P5_Dst ***
hg19:Y:20112089-G-A hg38:Y:18000209-G-A P5_Dst ***
hg19:Y:20139776-T-C hg38:Y:18027896-T-C P5_Dst ***
hg19:Y:20196584-G-A hg38:Y:18034698-G-A P5_Dst ***
hg19:Y:20230152-T-TA,TAA hg38:Y:18068266-T-TA,TAA P5_Dst 16×A***
hg19:Y:20232617-A-G hg38:Y:18070731-A-G P5_Dst ***
hg19:Y:20246601-TA-T hg38:Y:18084715-TA-T P5_Dst ***
hg19:Y:20283658-G-A hg38:Y:18121772-G-A P5_Dst ***
hg19:Y:20295869-T-C hg38:Y:18133983-T-C P5_Dst ***
hg19:Y:20312385-C-T hg38:Y:18150499-C-T P5_Dst ***
hg19:Y:20389872-G-A hg38:Y:18227986-G-A P5_Dst ***
hg19:Y:20399512-G-A hg38:Y:18237626-G-A P5_Dst ***
hg19:Y:20399518-G-A hg38:Y:18237632-G-A P5_Dst ***
hg19:Y:20399526-G-A hg38:Y:18237640-G-A P5_Dst ***
hg19:Y:20510438-T-C hg38:Y:18348552-T-C P5_Dst ***
hg19:Y:20851933-G-A hg38:Y:18690047-G-A P4_Dst ***
hg19:Y:20851953-GAGGAAGACTG-AAAAAAAACTA hg38:Y:18690067-GAGGAAGACTG-AAAAAAAACTA P4_Dst ***
hg19:Y:20893559-T-C hg38:Y:18731673-T-C P4_Dst ***
hg19:Y:20977661-T-A hg38:Y:18815775-T-A P4_Dst ***
hg19:Y:22268233-GTTT-CTTC hg38:Y:20106347-GTTT-CTTC DYZ19 ***
hg19:Y:22275639-CCTA-TCTT hg38:Y:20113753-CCTA-TCTT DYZ19 ***
hg19:Y:22281980-C-T hg38:Y:20120094-C-T DYZ19 ***
hg19:Y:22298716-ACT-GCA hg38:Y:20136830-ACT-GCA DYZ19 ***
hg19:Y:22337771-C-T hg38:Y:20175885-C-T DYZ19 ***
hg19:Y:22355746-A-G hg38:Y:20193860-A-G DYZ19 ***
hg19:Y:22364479-T-C hg38:Y:20202593-T-C DYZ19 ***
hg19:Y:22430833-G-T hg38:Y:20268947-G-T DYZ19 ***
hg19:Y:22483467-ATG-TTT hg38:Y:20321581-ATG-TTT DYZ19 ***
hg19:Y:22488341-T-C hg38:Y:20326455-T-C DYZ19 ***
hg19:Y:22490175-AGTGT-TGTGG hg38:Y:20328289-AGTGT-TGTGG DYZ19 ***
hg19:Y:22495654-G-C hg38:Y:20333768-G-C DYZ19 ***
hg19:Y:22502828-TTGTG-ATGTC,TTGTC hg38:Y:20340942-TTGTG-ATGTC,TTGTC DYZ19 ***
hg19:Y:22504526-C-G hg38:Y:20342640-C-G DYZ19 ***
hg19:Y:22505043-GGCCT-AACCA,GACCT hg38:Y:20343157-GGCCT-AACCA,GACCT DYZ19 ***
hg19:Y:22810971-TAC-T hg38:Y:20649085-TAC-T ***
hg38:Y:21768124-T-C ***
hg19:Y:24023162-T-C hg38:Y:21877015-T-C ***
hg19:Y:24558155-G-A hg38:Y:22412008-G-A P3_t2 ***
hg19:Y:24570625-T-C hg38:Y:22424478-T-C P3_t2 ***
hg19:Y:24628014-A-T hg38:Y:22481867-A-T P3_t2 ***
hg19:Y:24628063-GAGG-AAAA hg38:Y:22481916-GAGG-AAAA P3_t2 ***
hg19:Y:24642024-T-C hg38:Y:22495877-T-C P3_t2 ***
hg19:Y:24680465-T-C hg38:Y:22534318-T-C P3_b2 ***
hg19:Y:24701562-G-T hg38:Y:22555415-G-T P3_b2 ***
hg19:Y:24851241-A-G hg38:Y:22705094-A-G IR1_R ***
hg19:Y:24907781-T-TA hg38:Y:22761634-T-TA g1 22×A***
hg19:Y:25085892-A-G hg38:Y:22939745-A-G g1 ***
hg19:Y:25291897-T-C hg38:Y:23145750-T-C P2_r1 ***
hg19:Y:25378556-G-A hg38:Y:23232409-G-A P2_r2 ***
hg19:Y:25412653-CTT-C hg38:Y:23266506-CTT-C P2_r2 16×T***
hg19:Y:25445007-A-G hg38:Y:23298860-A-G P2_r2 ***
hg19:Y:25486075-C-T hg38:Y:23339928-C-T P2_r2 ***
hg19:Y:25491097-TTTTG-T hg38:Y:23344950-TTTTG-T P2_r2 4×TTTG***
hg19:Y:25682559-A-G hg38:Y:23536412-A-G P1_b3 ***
hg19:Y:26376499-CA-AA,C hg38:Y:24230352-CA-AA,C P1_Y1 18×A***
hg19:Y:26387069-G-GT hg38:Y:24240922-G-GT P1_Y1 13×T***
hg19:Y:26501807-C-CA hg38:Y:24355660-C-CA P1_Y1 15×A***
hg19:Y:27121711-C-T hg38:Y:24975564-C-T P1_g3 ***
hg19:Y:27122319-A-T hg38:Y:24976172-A-T P1_g3 ***
hg19:Y:27130320-GAA-G hg38:Y:24984173-GAA-G P1_g3 14×A***
hg19:Y:27136198-A-G hg38:Y:24990051-A-G P1_g3 ***
hg19:Y:27149071-C-T hg38:Y:25002924-C-T P1_g3 ***
hg19:Y:27189243-C-T hg38:Y:25043096-C-T P1_g3 ***
hg19:Y:27197778-A-G hg38:Y:25051631-A-G P1_g3 ***
hg19:Y:27214359-C-T hg38:Y:25068212-C-T P1_g3 ***
hg19:Y:27222361-C-A hg38:Y:25076214-C-A P1_g3 ***
hg19:Y:27228987-C-T hg38:Y:25082840-C-T P1_g3 ***
hg19:Y:27242342-C-T hg38:Y:25096195-C-T P1_g3 ***
hg19:Y:27242795-G-A hg38:Y:25096648-G-A P1_g3 ***
hg19:Y:27280288-GG-AA hg38:Y:25134141-GG-AA P1_g3 ***
hg19:Y:27300819-C-T hg38:Y:25154672-C-T P1_g3 ***
hg19:Y:27305660-A-G hg38:Y:25159513-A-G P1_g3 ***
hg19:Y:27397919-C-T hg38:Y:25251772-C-T P1_g3 ***
hg19:Y:27397928-C-T hg38:Y:25251781-C-T P1_g3 ***
hg19:Y:27410376-T-C hg38:Y:25264229-T-C P1_g3 ***
hg19:Y:27459997-C-T hg38:Y:25313850-C-T P1_Y2 ***
hg19:Y:27461249-A-C hg38:Y:25315102-A-C P1_Y2 ***
hg19:Y:27461606-T-G hg38:Y:25315459-T-G P1_Y2 ***
hg19:Y:27471981-G-A hg38:Y:25325834-G-A P1_Y2 ***
hg19:Y:27472028-G-T hg38:Y:25325881-G-T P1_Y2 ***
hg19:Y:27472187-G-A hg38:Y:25326040-G-A P1_Y2 ***
hg19:Y:27494426-C-T hg38:Y:25348279-C-T P1_Y2 ***
hg19:Y:27538907-G-A hg38:Y:25392760-G-A P1_Y2 ***
hg19:Y:27541368-A-G hg38:Y:25395221-A-G P1_Y2 ***
hg19:Y:27542426-G-A hg38:Y:25396279-G-A P1_Y2 ***
hg19:Y:27566627-A-C hg38:Y:25420480-A-C P1_Y2 ***
hg19:Y:27572555-CTG-C hg38:Y:25426408-CTG-C P1_Y2 10×TG***
hg19:Y:27574365-T-C hg38:Y:25428218-T-C P1_Y2 ***
hg19:Y:27600557-C-T hg38:Y:25454410-C-T P1_Y2 ***
hg19:Y:27632633-T-C hg38:Y:25486486-T-C P1_Y2 ***
hg19:Y:27649970-C-T hg38:Y:25503823-C-T P1_Y2 ***
hg19:Y:27651529-C-T hg38:Y:25505382-C-T P1_Y2 ***
hg19:Y:27657415-T-A hg38:Y:25511268-T-A P1_Y2 ***
hg19:Y:27660634-A-C hg38:Y:25514487-A-C P1_Y2 ***
hg19:Y:27661126-C-T hg38:Y:25514979-C-T P1_Y2 ***
hg19:Y:27665772-C-A hg38:Y:25519625-C-A P1_Y2 ***
hg19:Y:27666039-G-A hg38:Y:25519892-G-A P1_Y2 ***
hg19:Y:27666044-G-A hg38:Y:25519897-G-A P1_Y2 ***
hg19:Y:27666066-G-A hg38:Y:25519919-G-A P1_Y2 ***
hg19:Y:27737351-A-G hg38:Y:25591204-A-G P1_Y2 ***
hg19:Y:27754201-T-C hg38:Y:25608054-T-C P1_Y2 ***
hg19:Y:27767287-C-T hg38:Y:25621140-C-T P1_Y2 ***
hg19:Y:27790547-C-A hg38:Y:25644400-C-A P1_Y2 ***
hg19:Y:27801774-C-A hg38:Y:25655627-C-A P1_Y2 ***
hg19:Y:27804257-GGAGTGG-AAAGTAA hg38:Y:25658110-GGAGTGG-AAAGTAA P1_Y2 ***
hg19:Y:27804305-G-A hg38:Y:25658158-G-A P1_Y2 ***
hg19:Y:27809840-G-A hg38:Y:25663693-G-A P1_Y2 ***
hg19:Y:27837481-G-A hg38:Y:25691334-G-A P1_Y2 ***
hg19:Y:27846923-G-T hg38:Y:25700776-G-T P1_Y2 ***
hg19:Y:27866184-A-G hg38:Y:25720037-A-G P1_Y2 ***
hg19:Y:27880284-T-C hg38:Y:25734137-T-C P1_Y2 ***
hg19:Y:27922950-A-T hg38:Y:25776803-A-T P1_Y2 ***
hg19:Y:27972276-A-G hg38:Y:25826129-A-G P1_Y2 ***
hg19:Y:28051624-A-G hg38:Y:25905477-A-G P1_Y2 ***
hg19:Y:28086316-A-C hg38:Y:25940169-A-C P1_Y2 ***
hg19:Y:28091500-C-T hg38:Y:25945353-C-T P1_Y2 ***
hg19:Y:28114947-TA-T hg38:Y:25968800-TA-T P1_b4 ***
hg19:Y:28120118-T-C hg38:Y:25973971-T-C P1_b4 ***
hg19:Y:28172366-C-T hg38:Y:26026219-C-T P1_b4 ***
hg19:Y:28255069-TC-T hg38:Y:26108922-TC-T P1_b4 ***
hg19:Y:28343345-G-T hg38:Y:26197198-G-T P1_gr2 ***
hg19:Y:28346944-C-G hg38:Y:26200797-C-G P1_gr2 ***
hg19:Y:28349544-T-G hg38:Y:26203397-T-G P1_gr2 ***
hg19:Y:28350699-G-C hg38:Y:26204552-G-C P1_gr2 ***
hg19:Y:28351176-A-G hg38:Y:26205029-A-G P1_gr2 ***
hg19:Y:28359563-G-C hg38:Y:26213416-G-C P1_gr2 ***
hg19:Y:28362754-C-A hg38:Y:26216607-C-A P1_gr2 ***
hg19:Y:28362773-G-A hg38:Y:26216626-G-A P1_gr2 ***
hg19:Y:28362784-A-T hg38:Y:26216637-A-T P1_gr2 ***
hg19:Y:28362792-C-G hg38:Y:26216645-C-G P1_gr2 ***
hg19:Y:28368913-A-G hg38:Y:26222766-A-G P1_gr2 ***
hg19:Y:28381004-T-A hg38:Y:26234857-T-A P1_gr2 ***
hg19:Y:28387262-A-G hg38:Y:26241115-A-G P1_gr2 ***
hg19:Y:28392035-T-G hg38:Y:26245888-T-G P1_gr2 ***
hg19:Y:28394930-T-G hg38:Y:26248783-T-G P1_gr2 ***
hg19:Y:28397661-CATATT-C hg38:Y:26251514-CATATT-C P1_gr2 ***
hg19:Y:28397707-G-A hg38:Y:26251560-G-A P1_gr2 ***
hg19:Y:28399777-C-T hg38:Y:26253630-C-T P1_gr2 ***
hg19:Y:28404098-C-T hg38:Y:26257951-C-T P1_gr2 ***
hg19:Y:28404132-G-A hg38:Y:26257985-G-A P1_gr2 ***
hg19:Y:28407463-C-T hg38:Y:26261316-C-T P1_gr2 ***
hg19:Y:28414287-G-C hg38:Y:26268140-G-C P1_gr2 ***
hg19:Y:28420879-C-T hg38:Y:26274732-C-T P1_gr2 ***
hg19:Y:28431461-C-T hg38:Y:26285314-C-T P1_gr2 ***
hg19:Y:28431471-C-T hg38:Y:26285324-C-T P1_gr2 ***
hg19:Y:28431476-CTC-TTT hg38:Y:26285329-CTC-TTT P1_gr2 ***
hg19:Y:28445585-G-A hg38:Y:26299438-G-A P1_gr2 ***
hg19:Y:28449142-A-G hg38:Y:26302995-A-G P1_gr2 ***
hg19:Y:28453258-G-A hg38:Y:26307111-G-A P1_gr2 ***
hg19:Y:17278250-AGAAAGGAAGAAAGGAAGAAGAACGAAAGAAA-AGAAAGGAAGAAAGGAAGAAGAACGAAA,GAAAGGAAGAAAGGAAGAAGAAC hg38:Y:15166370-AGAAAGGAAGAAAGGAAGAAGAACGAAAGAAA-AGAAAGGAAGAAAGGAAGAAGAACGAAA,GAAAGGAAGAAAGGAAGAAGAAC ***
hg19:Y:27567147-G-GA,GAA hg38:Y:25421000-G-GA,GAA P1_Y2 11×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B2427831518030995191338375059
Kit: B242783-A*16000000100000008300000
Used in age calculations1518030995191338375059
Counts of SNPs40
Variant counts last updated 2025-01-24 03:11:22.

* BED data not available. Using default values.


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