Hirschi
BigY3: 686779, BigY2: 686779MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 686779 | BigY2 686779 |
---|---|---|---|---|---|---|---|---|---|
19878927-C-A | 17767047-C-A | P5_Prx | A* | ||||||
20288449-A-AAG | 18126563-A-AAG | P5_Dst | A* | ||||||
13450035-C-T | 11294359-C-T | A* | |||||||
6932320-T-C | 7064279-T-C | FGC8551 | Y | Y | + | + | |||
22506724-T-A | 20344838-T-A | FT460664 | DYZ19 | + | |||||
14061080-T-A | 11940374-T-A | BY92683 | Y | Y | + | + | |||
9102164-C-A | 9264555-C-A | BY78094 | Y | + | + | ||||
17790948-C-T | 15679068-C-T | BY117402 | Y | Y | + | + | |||
14168436-A-T | 12047730-A-T | M4121 | Y | Y | + | + | |||
19249722-C-T | 17137842-C-T | FT127232 | Y | + | |||||
22280370-C-T | 20118484-C-T | DYZ19 | *** | * | |||||
15268787-T-A | 13156876-T-A | ** | |||||||
11676575-T-G | ** | ||||||||
13975913-T-C | 11855207-T-C | ** | |||||||
13966291-G-T | 11845585-G-T | ** | |||||||
13941246-C-A | 11820540-C-A | ** | |||||||
13936224-G-T | 11815518-G-T | ** | |||||||
13926979-T-C | 11806273-T-C | ** | |||||||
13900035-C-G | 11779329-C-G | ** | |||||||
13885635-G-T | 11764929-G-T | ** | |||||||
13885618-T-G | 11764912-T-G | ** | |||||||
13885593-A-T | 11764887-A-T | ** | |||||||
13885581-T-G | 11764875-T-G | ** | |||||||
11676661-CGAATG-C | ** | ||||||||
11676582-C-T | ** | ||||||||
11649108-T-A | ** | ||||||||
14031885-T-G | 11911179-T-G | ** | |||||||
13557612-C-A | 11401936-C-A | ** | |||||||
13522889-T-G | 11367213-T-G | ** | |||||||
13491012-G-T | 11335336-G-T | ** | |||||||
13482265-T-G | 11326589-T-G | ** | |||||||
13298235-T-A | 11142559-T-A | ** | |||||||
13277401-A-T | 11121725-A-T | ** | |||||||
13229787-C-A | 11074111-C-A | ** | |||||||
16009601-A-C | 13897721-A-C | ** | |||||||
13229784-C-T | 11074108-C-T | ** | |||||||
13217725-C-A | 11062049-C-A | ** | |||||||
11028301-A-G | ** | ||||||||
11009866-T-C | ** | ||||||||
13983687-G-T | 11862981-G-T | ** | |||||||
14034085-C-A | 11913379-C-A | ** | |||||||
15178536-G-T | 13066622-G-T | ** | |||||||
14558110-T-C | 12446311-T-C | ** | |||||||
15161402-C-A | 13049488-C-A | ** | |||||||
15300143-A-T | 13188242-A-T | ** | |||||||
15396489-A-G | 13284609-A-G | ** | |||||||
15160647-T-A | 13048733-T-A | ** | |||||||
15600070-C-A | 13488190-C-A | ** | |||||||
14959607-G-T | 12847682-G-T | ** | |||||||
15606527-A-T | 13494647-A-T | ** | |||||||
14880396-C-A | 12768466-C-A | ** | |||||||
15732230-C-A | 13620350-C-A | ** | |||||||
14806197-C-A | 12694268-C-A | ** | |||||||
14769059-A-T | 12657128-A-T | ** | |||||||
14608284-T-A | 12496486-T-A | ** | |||||||
14558104-A-G | 12446305-A-G | ** | |||||||
14034116-C-A | 11913410-C-A | ** | |||||||
14558093-G-A | 12446294-G-A | ** | |||||||
14558085-A-G | 12446286-A-G | ** | |||||||
14551680-C-A | 12439881-C-A | 10×A | ** | ||||||
15906036-C-A | 13794156-C-A | ** | |||||||
14526526-A-C | 12414727-A-C | ** | |||||||
14518377-A-C | 12406578-A-C | ** | |||||||
14501952-A-T | 12390157-A-T | ** | |||||||
14501883-C-G | 12390088-C-G | ** | |||||||
11009746-T-G | ** | ||||||||
14432060-A-T | 12311333-A-T | ** | |||||||
14114933-C-A | 11994227-C-A | ** | |||||||
14114875-A-T | 11994169-A-T | ** | |||||||
15995553-A-C | 13883673-A-C | ** | |||||||
14473592-T-G | 12352861-T-G | ** | |||||||
10950840-C-A | ** | ||||||||
10984754-C-G | ** | ||||||||
7433983-G-T | 7565942-G-T | ** | |||||||
9820604-T-A | 9982995-T-A | ** | |||||||
9784689-T-A | 9947080-T-A | ** | |||||||
9784684-G-A | 9947075-G-A | ** | |||||||
9458923-A-C | 9621314-A-C | ** | |||||||
9143217-A-C | 9305608-A-C | ** | |||||||
9068872-A-T | 9231263-A-T | ** | |||||||
8984423-C-T | 9146814-C-T | ** | |||||||
8970872-G-T | 9133263-G-T | ** | |||||||
8970859-C-CA | 9133250-C-CA | ** | |||||||
8792932-C-G | 8924891-C-G | ** | |||||||
8289074-C-A | 8421033-C-A | ** | |||||||
8072311-T-G | 8204270-T-G | ** | |||||||
22354401-T-C | 20192515-T-C | DYZ19 | ** | ||||||
7381829-A-C | 7513788-A-C | ** | |||||||
10652197-C-G | ** | ||||||||
7340958-T-G | 7472917-T-G | ** | |||||||
7337966-A-T | 7469925-A-T | ** | |||||||
7337914-A-T | 7469873-A-T | ** | |||||||
7238886-T-A | 7370845-T-A | ** | |||||||
7221271-T-G | 7353230-T-G | ** | |||||||
7201639-T-G | 7333598-T-G | ** | |||||||
7098643-T-G | 7230602-T-G | ** | |||||||
7063742-T-G | 7195701-T-G | ** | |||||||
7048528-G-T | 7180487-G-T | ** | |||||||
6976460-C-A | 7108419-C-A | ** | |||||||
6926429-C-A | 7058388-C-A | FT248289 | ** | ||||||
6926369-A-C | 7058328-A-C | ** | |||||||
6922624-A-G | 7054583-A-G | ** | |||||||
10022155-A-C | 10184546-A-C | ** | |||||||
10654554-C-T | ** | ||||||||
10984164-C-T | ** | ||||||||
10844610-T-C | ** | ||||||||
10958816-C-T | ** | ||||||||
16050006-G-A | 13938126-G-A | ** | |||||||
10946269-C-A | ** | ||||||||
10940826-C-T | ** | ||||||||
10940763-C-T | ** | ||||||||
10940754-C-T | ** | ||||||||
10935655-C-A | ** | ||||||||
10890116-C-A | ** | ||||||||
10889217-C-A | ** | ||||||||
10869015-T-TTATAC | ** | ||||||||
10861152-G-T | ** | ||||||||
10857938-C-A | ** | ||||||||
10844629-A-G | ** | ||||||||
10844605-T-C | ** | ||||||||
10654556-C-T | ** | ||||||||
10831468-T-G | ** | ||||||||
10801721-C-G | ** | ||||||||
10798671-C-A | ** | ||||||||
10770977-C-A | ** | ||||||||
10770654-A-G | ** | ||||||||
10754947-CATTCCATTCCATT-C | ** | ||||||||
10754936-C-G | ** | ||||||||
10754917-C-A | ** | ||||||||
10754906-C-G | ** | ||||||||
10685772-CAT-C | ** | ||||||||
10684623-C-G | ** | ||||||||
10671545-C-T | ** | ||||||||
10662511-G-T | ** | ||||||||
10654603-C-A | ** | ||||||||
16045287-C-T | 13933407-C-T | ** | |||||||
16319630-C-A | 14207750-C-A | ** | |||||||
16227976-G-T | 14116096-G-T | ** | |||||||
22880687-C-A | 20718801-C-A | ** | |||||||
25805106-AAT-A | 23658959-AAT-A | P1_b3 | ** | ||||||
25520735-A-C | 23374588-A-C | P1_gr1 | ** | ||||||
24249917-C-A | 22103770-C-A | P3_b1 | ** | ||||||
23713817-A-T | 21551931-A-T | ** | |||||||
23393326-C-A | 21231440-C-A | ** | |||||||
23264199-G-T | 21102313-G-T | FTA33193 | ** | ||||||
23126338-T-G | 20964452-T-G | ** | |||||||
23126337-T-G | 20964451-T-G | ** | |||||||
23041166-A-T | 20879280-A-T | ** | |||||||
23007541-T-A | 20845655-T-A | ** | |||||||
22997644-C-A | 20835758-C-A | ** | |||||||
22965502-G-T | 20803616-G-T | ** | |||||||
22880782-T-A | 20718896-T-A | ** | |||||||
22791087-T-A | 20629201-T-A | ** | |||||||
27883448-C-A | 25737301-C-A | P1_Y2 | ** | ||||||
22713115-G-T | 20551229-G-T | ** | |||||||
22703653-G-GAC | 20541767-G-GAC | ** | |||||||
22691237-T-C | 20529351-T-C | ** | |||||||
22691221-A-G | 20529335-A-G | ** | |||||||
22691217-T-C | 20529331-T-C | ** | |||||||
22691215-G-C | 20529329-G-C | ** | |||||||
22691202-A-T | 20529316-A-T | ** | |||||||
22591993-A-G | 20430107-A-G | ** | |||||||
22591533-G-A | 20429647-G-A | ** | |||||||
22591525-G-C | 20429639-G-C | ** | |||||||
22562970-A-C | 20401084-A-C | ** | |||||||
22429826-C-A | 20267940-C-A | DYZ19 | ** | ||||||
22356955-C-A | 20195069-C-A | DYZ19 | ** | ||||||
25805147-G-T | 23659000-G-T | P1_b3 | ** | ||||||
27936842-A-T | 25790695-A-T | P1_Y2 | ** | ||||||
22354362-C-T | 20192476-C-T | DYZ19 | ** | ||||||
56841555-A-T | ** | ||||||||
26243399-C-T | 24097252-C-T | P1_Y1 | ** | ||||||
26243391-C-CA | 24097244-C-CA | P1_Y1 | ** | ||||||
26243384-A-AGGCAG | 24097237-A-AGGCAG | P1_Y1 | ** | ||||||
26243378-C-CA | 24097231-C-CA | P1_Y1 | ** | ||||||
26243370-C-G | 24097223-C-G | P1_Y1 | ** | ||||||
26108823-A-G | 23962676-A-G | P1_Y1 | ** | ||||||
23857885-G-A | 21695999-G-A | ** | |||||||
23289361-T-C | 21127475-T-C | ** | |||||||
23049674-AAT-A | 20887788-AAT-A | ** | |||||||
22509161-G-A | 20347275-G-A | DYZ19 | ** | ||||||
22236203-C-A | 20074317-C-A | DYZ19 | ** | ||||||
16109783-C-A | 13997903-C-A | P8_Prx | ** | ||||||
2677496-T-C | 2809455-T-C | ** | |||||||
56835458-T-G | ** | ||||||||
27936843-A-T | 25790696-A-T | P1_Y2 | ** | ||||||
56834865-G-T | ** | ||||||||
56822431-C-G | ** | ||||||||
28730124-C-G | 26583977-C-G | ** | |||||||
28635647-G-T | 26489500-G-T | ** | |||||||
28608423-A-G | 26462276-A-G | ** | |||||||
28549408-C-A | 26403261-C-A | ** | |||||||
28478866-A-C | 26332719-A-C | ** | |||||||
28462089-T-C | 26315942-T-C | ** | |||||||
28234396-G-T | 26088249-G-T | P1_b4 | ** | ||||||
28091432-A-T | 25945285-A-T | P1_Y2 | ** | ||||||
28091389-T-A | 25945242-T-A | P1_Y2 | ** | ||||||
27936846-G-T | 25790699-G-T | P1_Y2 | ** | ||||||
27936844-A-T | 25790697-A-T | P1_Y2 | ** | ||||||
22356926-A-T | 20195040-A-T | DYZ19 | ** | ||||||
22240969-T-G | 20079083-T-G | DYZ19 | ** | ||||||
16267259-A-T | 14155379-A-T | ** | |||||||
17876292-T-G | 15764412-T-G | ** | |||||||
18931915-C-G | 16820035-C-G | ** | |||||||
18928524-A-T | 16816644-A-T | ** | |||||||
18913418-A-C | 16801538-A-C | ** | |||||||
18825606-GA-G | 16713726-GA-G | ** | |||||||
18596447-A-C | 16484567-A-C | ** | |||||||
18316221-C-A | 16204341-C-A | P6_Prx | ** | ||||||
18316212-G-T | 16204332-G-T | P6_Prx | ** | ||||||
18192321-A-T | 16080441-A-T | ** | |||||||
18183343-A-T | 16071463-A-T | ** | |||||||
18124390-A-C | 16012510-A-C | ** | |||||||
18071694-C-G | 15959814-C-G | ** | |||||||
18071667-A-T | 15959787-A-T | ** | |||||||
18071657-A-T | 15959777-A-T | ** | |||||||
17538408-A-T | 15426528-A-T | ** | |||||||
19053392-G-C | 16941512-G-C | ** | |||||||
17512581-A-T | 15400701-A-T | ** | |||||||
17306729-G-C | 15194849-G-C | ** | |||||||
17117387-T-G | 15005507-T-G | ** | |||||||
17092535-C-A | 14980655-C-A | ** | |||||||
16926838-T-G | 14814958-T-G | ** | |||||||
16926184-C-T | 14814304-C-T | ** | |||||||
16710241-C-A | 14598361-C-A | ** | |||||||
16490561-G-T | 14378681-G-T | FT363198 | ** | ||||||
16463482-G-T | 14351602-G-T | ** | |||||||
16351757-C-G | 14239877-C-G | ** | |||||||
6669702-T-C | 6801661-T-C | ** | |||||||
16302549-C-A | 14190669-C-A | ** | |||||||
16273788-C-A | 14161908-C-A | ** | |||||||
18989782-A-C | 16877902-A-C | ** | |||||||
19062435-A-T | 16950555-A-T | ** | |||||||
22210633-T-G | 20048747-T-G | ** | |||||||
20989221-A-T | 18827335-A-T | P4_Dst | ** | ||||||
22189022-A-G | 20027136-A-G | ** | |||||||
22165203-A-T | 20003317-A-T | ** | |||||||
22084956-A-C | 19923070-A-C | ** | |||||||
21987286-T-A | 19825400-T-A | ** | |||||||
21888684-G-A | 19726798-G-A | ** | |||||||
21735270-A-G | 19573384-A-G | ** | |||||||
21421023-T-C | 19259137-T-C | ** | |||||||
21386352-C-A | 19224466-C-A | ** | |||||||
21328826-A-AC | 19166940-A-AC | ** | |||||||
21241870-A-T | 19079984-A-T | ** | |||||||
21238615-C-A | 19076729-C-A | ** | |||||||
21171980-G-C | 19010094-G-C | ** | |||||||
21054455-T-G | 18892569-T-G | ** | |||||||
20966351-C-A | 18804465-C-A | P4_Dst | ** | ||||||
19181689-C-A | 17069809-C-A | ** | |||||||
20803045-C-A | 18641159-C-A | P4_Gap | ** | ||||||
20730804-A-T | 18568918-A-T | P4_Prx | ** | ||||||
20675827-C-A | 18513941-C-A | P4_Prx | ** | ||||||
20330369-G-T | 18168483-G-T | P5_Dst | ** | ||||||
19842287-A-T | 17730407-A-T | P5_Prx | ** | ||||||
19842057-A-T | 17730177-A-T | P5_Prx | ** | ||||||
19842046-T-A | 17730166-T-A | P5_Prx | ** | ||||||
19842018-C-T | 17730138-C-T | P5_Prx | ** | ||||||
19678027-T-A | 17566147-T-A | P5_Prx | ** | ||||||
19591939-C-A | 17480059-C-A | P5_Prx | ** | ||||||
19379658-G-A | 17267778-G-A | ** | |||||||
19310191-C-A | 17198311-C-A | ** | |||||||
19246775-C-G | 17134895-C-G | ** | |||||||
19246751-A-T | 17134871-A-T | ** | |||||||
6922620-T-A | 7054579-T-A | ** | |||||||
7721413-G-T | 7853372-G-T | ** | |||||||
6626708-C-A | 6758667-C-A | ** | |||||||
15158744-C-A | 13046830-C-A | ** | |||||||
28551169-C-A | 26405022-C-A | ** | |||||||
14526515-C-A | 12414716-C-A | ** | |||||||
10794257-T-A | ** | ||||||||
13212622-C-A | 11056946-C-A | ** | |||||||
13942278-C-T | 11821572-C-T | ** | |||||||
3598941-C-A | 3730900-C-A | ** | |||||||
7385851-C-A | 7517810-C-A | ** | |||||||
14607783-G-T | 12495985-G-T | ** | |||||||
5785396-C-A | 5917355-C-A | ** | |||||||
14373737-G-C | 12253033-G-C | ** | |||||||
23439090-C-A | 21277204-C-A | ** | |||||||
18873927-T-G | 16762047-T-G | ** | |||||||
10805246-C-A | ** | ||||||||
7127427-C-A | 7259386-C-A | ** | |||||||
14054999-C-A | 11934293-C-A | ** | |||||||
8671494-C-A | 8803453-C-A | ** | |||||||
28755048-C-A | 26608901-C-A | ** | |||||||
10914528-G-T | ** | ||||||||
10655913-C-T | ** | ||||||||
10655895-G-A | ** | ||||||||
10655894-T-C | ** | ||||||||
19463634-C-A | 17351754-C-A | ** | |||||||
14558080-T-A | 12446281-T-A | ** | |||||||
8855304-A-C | 8987263-A-C | ** | |||||||
10685798-A-T | ** | ||||||||
4240383-G-T | 4372342-G-T | ** | |||||||
10889298-C-G | ** | ||||||||
4929115-C-A | 5061074-C-A | BY177940 | ** | ||||||
10969879-C-A | ** | ||||||||
13480400-G-T | 11324724-G-T | ** | |||||||
28804417-T-A | 26658270-T-A | ** | |||||||
14397480-G-C | 12276776-G-C | ** | |||||||
23808024-C-A | 21646138-C-A | ** | |||||||
10944458-C-G | ** | ||||||||
2708532-C-A | 2840491-C-A | ** | |||||||
28234434-ATC-A | 26088287-ATC-A | P1_b4 | ** | ||||||
10790243-C-T | ** | ||||||||
10916012-T-A | ** | ||||||||
10916005-T-G | ** | ||||||||
10915996-C-A | ** | ||||||||
10915993-C-A | ** | ||||||||
10915971-A-C | ** | ||||||||
22527172-A-C | 20365286-A-C | ** | |||||||
21201154-C-A | 19039268-C-A | ** | |||||||
10969880-A-T | ** | ||||||||
15370802-C-A | 13258922-C-A | ** | |||||||
15671084-T-A | 13559204-T-A | ** | |||||||
14558106-T-A | 12446307-T-A | ** | |||||||
15671111-G-T | 13559231-G-T | ** | |||||||
10683604-T-C | ** | ||||||||
9499582-G-T | 9661973-G-T | ** | |||||||
10915983-T-A | ** | ||||||||
6585313-T-C | 6717272-T-C | ** | |||||||
21394446-C-A | 19232560-C-A | ** | |||||||
10915967-A-C | ** | ||||||||
15943808-C-A | 13831928-C-A | ** | |||||||
10911792-T-A | ** | ||||||||
6827844-C-A | 6959803-C-A | ** | |||||||
17859675-C-A | 15747795-C-A | ** | |||||||
18905004-C-A | 16793124-C-A | ** | |||||||
10022150-A-C | 10184541-A-C | ** | |||||||
14558090-G-T | 12446291-G-T | ** | |||||||
15106637-C-A | 12994725-C-A | ** | |||||||
7102411-C-A | 7234370-C-A | ** | |||||||
14538009-CA-C | 12426210-CA-C | 9×A | ** | ||||||
15309700-C-A | 13197804-C-A | ** | |||||||
56842126-G-T | ** | ||||||||
7135366-T-G | 7267325-T-G | ** | |||||||
11028303-T-A | ** | ||||||||
10989145-T-C | ** | ||||||||
15334510-C-A | 13222628-C-A | ** | |||||||
16528135-C-A | 14416255-C-A | ** | |||||||
21513950-C-A | 19352064-C-A | ** | |||||||
14558098-C-A | 12446299-C-A | ** | |||||||
11028287-C-T | ** | ||||||||
14312269-C-A | 12191563-C-A | ** | |||||||
10683605-G-C | ** | ||||||||
7391186-C-A | 7523145-C-A | ** | |||||||
7377648-C-A | 7509607-C-A | ** | |||||||
10770600-C-T | ** | ||||||||
23269513-A-C | 21107627-A-C | ** | |||||||
10938984-TTCATC-T | ** | ||||||||
10940803-C-T | ** | ||||||||
7784392-C-A | 7916351-C-A | ** | |||||||
13453264-C-T | 11297588-C-T | ** | |||||||
21616065-C-A | 19454179-C-A | ** | |||||||
15926770-C-A | 13814890-C-A | ** | |||||||
6892640-C-A | 7024599-C-A | ** | |||||||
4862644-C-A | 4994603-C-A | ** | |||||||
23208095-C-A | 21046209-C-A | ** | |||||||
15276621-C-A | 13164710-C-A | ** | |||||||
10896365-T-G | ** | ||||||||
25733066-G-T | 23586919-G-T | P1_b3 | ** | ||||||
7323095-C-A | 7455054-C-A | ** | |||||||
13927449-G-A | 11806743-G-A | ** | |||||||
9942931-C-A | 10105322-C-A | ** | |||||||
10654576-T-C | ** | ||||||||
3343280-C-A | 3475239-C-A | ** | |||||||
22868931-C-A | 20707045-C-A | ** | |||||||
14518424-C-A | 12406625-C-A | ** | |||||||
15653392-C-A | 13541512-C-A | ** | |||||||
21048354-C-A | 18886468-C-A | ** | |||||||
17092525-C-A | 14980645-C-A | ** | |||||||
11666481-C-A | ** | ||||||||
10904047-A-T | ** | ||||||||
10655896-T-C | ** | ||||||||
11028299-T-C | ** | ||||||||
16464618-CT-C | 14352738-CT-C | 8×T | ** | ||||||
11005210-C-A | ** | ||||||||
22189023-A-G | 20027137-A-G | ** | |||||||
14802814-C-A | 12690885-C-A | ** | |||||||
7337424-C-A | 7469383-C-A | ** | |||||||
10930158-C-A | ** | ||||||||
15355249-C-A | 13243368-C-A | ** | |||||||
11015509-G-T | ** | ||||||||
16062171-C-A | 13950291-C-A | ** | |||||||
22309934-G-T | 20148048-G-T | DYZ19 | ** | ||||||
6369038-G-T | 6500997-G-T | ** | |||||||
8970862-T-A | 9133253-T-A | ** | |||||||
10875792-A-T | ** | ||||||||
17152827-C-A | 15040947-C-A | ** | |||||||
19060002-C-A | 16948122-C-A | ** | |||||||
8635977-C-A | 8767936-C-A | ** | |||||||
17968916-C-A | 15857036-C-A | ** | |||||||
2906796-C-A | 3038755-C-A | ** | |||||||
3073749-G-C | 3205708-G-C | ** | |||||||
2785404-T-G | 2917363-T-G | ** | |||||||
2745890-AG-A | 2877849-AG-A | ** | |||||||
2744750-A-G | 2876709-A-G | ** | |||||||
2729668-T-A | 2861627-T-A | ** | |||||||
2708347-C-A | 2840306-C-A | ** | |||||||
2708314-C-A | 2840273-C-A | ** | |||||||
2699696-A-C | 2831655-A-C | ** | |||||||
10997297-A-C | ** | ||||||||
10950855-C-A | ** | ||||||||
16583392-G-GAA | 14471512-G-GAA | 10×A | ** | ||||||
10940758-A-AT | ** | ||||||||
18931913-T-A | 16820033-T-A | ** | |||||||
24409395-G-T | 22263248-G-T | ** | |||||||
3488812-G-T | 3620771-G-T | ** | |||||||
19678062-C-T | 17566182-C-T | P5_Prx | ** | ||||||
19678060-T-G | 17566180-T-G | P5_Prx | ** | ||||||
26415728-G-T | 24269581-G-T | P1_Y1 | ** | ||||||
10685813-A-T | ** | ||||||||
7234941-C-A | 7366900-C-A | ** | |||||||
8282390-C-A | 8414349-C-A | ** | |||||||
13453244-C-A | 11297568-C-A | ** | |||||||
15763913-C-A | 13652033-C-A | ** | |||||||
6922550-C-A | 7054509-C-A | ** | |||||||
15789230-C-A | 13677350-C-A | ** | |||||||
15649904-C-A | 13538024-C-A | ** | |||||||
10627903-C-T | ** | ||||||||
10627901-T-A | ** | ||||||||
3091827-T-G | 3223786-T-G | ** | |||||||
16860820-A-G | 14748940-A-G | FGC77280 | FT5607 | ** | |||||
10627881-T-A | ** | ||||||||
5675488-C-G | 5807447-C-G | ** | |||||||
3436405-G-T | 3568364-G-T | FT232764 | ** | ||||||
6469322-C-G | 6601281-C-G | ** | |||||||
6389623-C-A | 6521582-C-A | ** | |||||||
6165914-A-T | 6297873-A-T | IR3_Dst | ** | ||||||
6165900-G-T | 6297859-G-T | IR3_Dst | ** | ||||||
6165885-G-T | 6297844-G-T | IR3_Dst | ** | ||||||
6092309-A-C | 6224268-A-C | ** | |||||||
6074602-G-T | 6206561-G-T | ** | |||||||
5965993-T-A | 6097952-T-A | ** | |||||||
5965877-T-A | 6097836-T-A | ** | |||||||
5874297-C-A | 6006256-C-A | ** | |||||||
5852204-A-T | 5984163-A-T | ** | |||||||
5824040-C-A | 5955999-C-A | ** | |||||||
5367105-A-T | 5499064-A-T | ** | |||||||
3681412-A-T | 3813371-A-T | ** | |||||||
5003425-G-T | 5135384-G-T | ** | |||||||
4900279-G-C | 5032238-G-C | ** | |||||||
4804500-T-G | 4936459-T-G | ** | |||||||
3436441-C-T | 3568400-C-T | Z22151 | ** | ||||||
4804494-T-G | 4936453-T-G | ** | |||||||
4439325-T-G | 4571284-T-G | ** | |||||||
4257884-C-A | 4389843-C-A | ** | |||||||
4175016-C-T | 4306975-C-T | ** | |||||||
4089457-C-T | 4221416-C-T | ** | |||||||
4078677-C-A | 4210636-C-A | ** | |||||||
3865928-C-G | 3997887-C-G | ** | |||||||
3853587-T-A | 3985546-T-A | ** | |||||||
3853585-T-A | 3985544-T-A | ** | |||||||
3848599-G-C | 3980558-G-C | ** | |||||||
10685819-T-C | ** | ||||||||
10627886-T-A | ** | ||||||||
4134027-C-A | 4265986-C-A | ** | |||||||
23137545-C-A | 20975659-C-A | ** | |||||||
21185188-C-A | 19023302-C-A | ** | |||||||
10983081-C-A | FT439142 | ** | |||||||
10958340-A-AGTC | ** | ||||||||
22649392-C-A | 20487506-C-A | ** | |||||||
11014515-T-A | ** | ||||||||
6314848-T-A | 6446807-T-A | IR3_Dst | ** | ||||||
3627504-C-A | 3759463-C-A | ** | |||||||
10850045-C-A | ** | ||||||||
15394681-C-A | 13282801-C-A | ** | |||||||
8389766-G-A | 8521725-G-A | ** | |||||||
19591981-C-A | 17480101-C-A | P5_Prx | ** | ||||||
10687207-C-A | ** | ||||||||
17374993-C-A | 15263113-C-A | ** | |||||||
14485997-A-C | 12365266-A-C | ** | |||||||
7308343-C-A | 7440302-C-A | ** | |||||||
18753023-C-A | 16641143-C-A | ** | |||||||
14508686-C-A | 12396891-C-A | ** | |||||||
23004802-T-G | 20842916-T-G | ** | |||||||
17224297-C-A | 15112417-C-A | ** | |||||||
14554476-C-A | 12442677-C-A | ** | |||||||
3990754-C-A | 4122713-C-A | ** | |||||||
10838934-C-A | ** | ||||||||
10917729-G-T | ** | ||||||||
14035178-C-A | 11914472-C-A | ** | |||||||
11016266-C-A | ** | ||||||||
16422161-C-A | 14310281-C-A | ** | |||||||
28635073-C-A | 26488926-C-A | ** | |||||||
8705887-A-G | 8837846-A-G | ** | |||||||
9440307-C-A | 9602698-C-A | ** | |||||||
14609798-TCA-T | 12498000-TCA-T | ** | |||||||
10904031-A-C | ** | ||||||||
11030217-C-G | ** | ||||||||
10844620-T-A | ** | ||||||||
11030249-T-C | ** | ||||||||
11001930-T-C | ** | ||||||||
10689149-A-T | ** | ||||||||
4920123-C-A | 5052082-C-A | ** | |||||||
16180170-C-A | 14068290-C-A | ** | |||||||
10794303-C-A | ** | ||||||||
22691214-A-G | 20529328-A-G | ** | |||||||
26100578-C-A | 23954431-C-A | P1_Y1 | ** | ||||||
22108756-C-A | 19946870-C-A | ** | |||||||
21960464-C-A | 19798578-C-A | ** | |||||||
14023180-C-A | 11902474-C-A | ** | |||||||
10051326-C-A | 10213717-C-A | ** | |||||||
9977990-C-A | 10140381-C-A | ** | |||||||
3990534-C-A | 4122493-C-A | ** | |||||||
3032623-T-G | 3164582-T-G | ** | |||||||
10654581-T-C | ** | ||||||||
10671562-TTCCAG-T | ** | ||||||||
10947325-C-T | FT437743 | ** | |||||||
13231649-C-A | 11075973-C-A | FGC65708 | ** | ||||||
10014984-ATTTT-A,ATTT | 10177375-ATTTT-A,ATTT | 27×T | *** | ||||||
16627751-T-C | 14515871-T-C | *** | |||||||
14203430-CAAAA-C,CA | 12082724-CAAAA-C,CA | 23×A | *** | ||||||
14302434-A-G | 12181728-A-G | *** | |||||||
23086832-G-T | 20924946-G-T | *** | |||||||
13579481-G-A | 11423805-G-A | *** | |||||||
13653840-C-A | 11498164-C-A | BY87159 | *** | ||||||
22562581-A-G | 20400695-A-G | *** | |||||||
22857421-T-C | 20695535-T-C | *** | |||||||
7241792-T-A | 7373751-T-A | *** | |||||||
3403261-CAAAA-C,CAAA | 3535220-CAAAA-C,CAAA | 30×A | *** | ||||||
4427411-A-G | 4559370-A-G | *** | |||||||
3446607-CAAAAAAAAA-C | 3578566-CAAAAAAAAA-C | 25×A | *** | ||||||
22683520-AT-A | 20521634-AT-A | *** | |||||||
5861164-C-A | 5993123-C-A | *** | |||||||
28673327-C-A | 26527180-C-A | *** | |||||||
17158927-C-A | 15047047-C-A | *** | |||||||
14995308-C-A | 12883393-C-A | *** | |||||||
10968395-C-A | *** | ||||||||
15242358-C-A | 13130444-C-A | *** | |||||||
13835143-T-A | 11714437-T-A | *** | |||||||
16057192-C-A | 13945312-C-A | *** | |||||||
14247758-A-G | 12127052-A-G | *** | |||||||
10022036-C-T | 10184427-C-T | *** | |||||||
15616197-C-A | 13504317-C-A | *** | |||||||
13835135-G-A | 11714429-G-A | *** | |||||||
13645044-C-A | 11489368-C-A | *** | |||||||
28531272-T-C | 26385125-T-C | *** | |||||||
18608589-C-CAA | 16496709-C-CAA | 13×A | *** | ||||||
7126524-CT-C,CTT | 7258483-CT-C,CTT | 23×T | *** | ||||||
23380570-CA-C,CAA | 21218684-CA-C,CAA | 13×A | *** | ||||||
13579483-G-A | 11423807-G-A | *** | |||||||
9852631-G-A | 10015022-G-A | *** | |||||||
4701198-C-T | 4833157-C-T | *** | |||||||
8079567-G-T | 8211526-G-T | *** | |||||||
6513847-C-A | 6645806-C-A | *** | |||||||
18833851-C-A | 16721971-C-A | *** | |||||||
16842588-C-A | 14730708-C-A | *** | |||||||
23414072-C-A | 21252186-C-A | *** | |||||||
21935012-C-A | 19773126-C-A | *** | |||||||
22783218-C-A | 20621332-C-A | *** | |||||||
22761044-C-A | 20599158-C-A | *** | |||||||
22655769-C-A | 20493883-C-A | *** | |||||||
22600425-C-A | 20438539-C-A | *** | |||||||
22598336-C-A | 20436450-C-A | *** | |||||||
22100756-C-T | 19938870-C-T | *** | |||||||
21950530-C-A | 19788644-C-A | *** | |||||||
21926738-C-A | 19764852-C-A | *** | |||||||
16908451-TAAAAA-T,TAAAA | 14796571-TAAAAA-T,TAAAA | 21×A | *** | ||||||
4447486-C-A | 4579445-C-A | *** | |||||||
13835152-T-C | 11714446-T-C | *** | |||||||
20640343-C-A | 18478457-C-A | P4_Prx | *** | ||||||
56837094-G-T | *** | ||||||||
17491711-C-A | 15379831-C-A | *** | |||||||
17339054-T-C | 15227174-T-C | *** | |||||||
17235366-C-A | 15123486-C-A | *** | |||||||
15656867-C-A | 13544987-C-A | *** | |||||||
28671683-A-G | 26525536-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 686779 | 9460950 | 7782055 | 7694832 |
Kit: 686779 | 14945770 | 9354620 | 8304256 |
Used in age calculations | 14945770 | 9354620 | 8304256 |
Counts of SNPs | 5 | 5 |
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