Campbell
BigY2: IN41259MDKA Birth:
ScotlandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 IN41259 |
|---|---|---|---|---|---|---|---|
| hg19:Y:19833813-G-A hg38:Y:17721933-G-A | P5_Prx | A* | |||||
| hg19:Y:22313618-C-G hg38:Y:20151732-C-G | DYZ19 | A* | |||||
| hg19:Y:15226328-T-C hg38:Y:13114414-T-C | CTS3849 | Y | + | ||||
| hg19:Y:15226331-A-G hg38:Y:13114417-A-G | S4628 | Y | + | ||||
| hg19:Y:15226335-C-T hg38:Y:13114421-C-T | S4629 | Y | + | ||||
| hg19:Y:15226338-G-A hg38:Y:13114424-G-A | S4630 | Y | + | ||||
| hg19:Y:15226343-A-T hg38:Y:13114429-A-T | FGC11226 | S4631 Z16218 | Y | + | |||
| hg19:Y:14807693-A-G hg38:Y:12695764-A-G | BY198297 | Y | Y | + | |||
| hg19:Y:14876279-A-G hg38:Y:12764349-A-G | BY198300 | Y | Y | + | |||
| hg19:Y:16302055-T-C hg38:Y:14190175-T-C | BY201083 | Y | Y | + | |||
| hg19:Y:17337240-G-A hg38:Y:15225360-G-A | BY200053 | Y | Y | + | |||
| hg19:Y:21515397-A-G hg38:Y:19353511-A-G | BY198479 | Y | Y | + | |||
| hg19:Y:22946876-A-G hg38:Y:20784990-A-G | BY198527 | Y | Y | + | |||
| hg19:Y:14435863-G-GA hg38:Y:12315136-G-GA | Z17966 | Z17966 | * | ||||
| hg19:Y:14435875-A-T hg38:Y:12315148-A-T | S1256 | Y | * | ||||
| hg19:Y:13706033-AGAATGGAATG-A hg38:Y:11550357-AGAATGGAATG-A | DYZ17 | 10×GAATG | * | ||||
| hg19:Y:18249943-C-T hg38:Y:16138063-C-T | CTS8870 PF3777 | ** | |||||
| hg19:Y:15922017-G-T hg38:Y:13810137-G-T | PR2007 | ** | |||||
| hg19:Y:7775111-T-A hg38:Y:7907070-T-A | PF4652 | ** | |||||
| hg19:Y:15388454-T-G hg38:Y:13276574-T-G | ** | ||||||
| hg19:Y:21012190-ATG-A hg38:Y:18850304-ATG-A | P4_Dst | 20×TG | ** | ||||
| hg19:Y:16425045-C-T hg38:Y:14313165-C-T | CTS5672 PF4732 | ** | |||||
| hg19:Y:18031258-T-C hg38:Y:15919378-T-C | FT301799 | ** | |||||
| hg19:Y:58974558-T-C hg38:Y:56828411-T-C | ** | ||||||
| hg19:Y:58975982-C-T hg38:Y:56829835-C-T | ** | ||||||
| hg19:Y:28798965-A-T hg38:Y:26652818-A-T | ** | ||||||
| hg38:Y:56734757-G-C | ** | ||||||
| hg19:Y:14771126-CTTTTT-C hg38:Y:12659195-CTTTTT-C | 16×T | ** | |||||
| hg38:Y:10940327-C-T | ** | ||||||
| hg38:Y:11020178-A-T | ** | ||||||
| hg19:Y:8342842-T-TA hg38:Y:8474801-T-TA | 10×A | ** | |||||
| hg38:Y:10663627-T-C | ** | ||||||
| hg38:Y:10765650-G-A | FT225316 | ** | |||||
| hg38:Y:10765651-T-C | ** | ||||||
| hg38:Y:10922194-A-T | ** | ||||||
| hg38:Y:10922202-T-A | ** | ||||||
| hg38:Y:10669414-CATTCA-C | ** | ||||||
| hg38:Y:10836513-C-CAATTT | ** | ||||||
| hg38:Y:10757397-C-A | ** | ||||||
| hg38:Y:10955228-C-T | ** | ||||||
| hg38:Y:10955233-T-G | ** | ||||||
| hg38:Y:10955239-A-T | ** | ||||||
| hg38:Y:10955242-C-G | ** | ||||||
| hg38:Y:10955255-A-T | ** | ||||||
| hg19:Y:22037544-C-A hg38:Y:19875658-C-A | ** | ||||||
| hg38:Y:10898332-C-G | ** | ||||||
| hg38:Y:11016369-CTGCCT-C | ** | ||||||
| hg19:Y:13239914-G-T hg38:Y:11084238-G-T | A17658 | ** | |||||
| hg19:Y:13212786-C-A hg38:Y:11057110-C-A | ** | ||||||
| hg19:Y:21961392-C-A hg38:Y:19799506-C-A | ** | ||||||
| hg38:Y:10822628-C-T | ** | ||||||
| hg19:Y:26199601-ATAT-A hg38:Y:24053454-ATAT-A | P1_Y1 | ** | |||||
| hg38:Y:10955430-C-G | ** | ||||||
| hg38:Y:11023144-A-C | ** | ||||||
| hg38:Y:11020156-C-G | ** | ||||||
| hg38:Y:10900765-C-A | ** | ||||||
| hg38:Y:10785335-C-T | ** | ||||||
| hg38:Y:10776084-C-A | ** | ||||||
| hg38:Y:10898372-C-CAATTT | ** | ||||||
| hg38:Y:10755023-G-A | BY83758 | ** | |||||
| hg38:Y:11023159-T-C | ** | ||||||
| hg19:Y:16932025-C-A hg38:Y:14820145-C-A | ** | ||||||
| hg38:Y:11000438-C-G | ** | ||||||
| hg38:Y:10955273-C-A | ** | ||||||
| hg38:Y:10899923-A-T | ** | ||||||
| hg19:Y:16889731-C-A hg38:Y:14777851-C-A | FT169456 | ** | |||||
| hg38:Y:10898356-TC-T | ** | ||||||
| hg38:Y:10898360-T-TC | ** | ||||||
| hg38:Y:10898374-T-G | ** | ||||||
| hg38:Y:10663628-G-A | ** | ||||||
| hg38:Y:10663636-A-C | ** | ||||||
| hg38:Y:10663597-C-A | ** | ||||||
| hg19:Y:4138882-G-T hg38:Y:4270841-G-T | ** | ||||||
| hg38:Y:56837328-C-A | ** | ||||||
| hg19:Y:26225748-T-TC hg38:Y:24079601-T-TC | P1_Y1 | ** | |||||
| hg19:Y:13464353-C-A hg38:Y:11308677-C-A | ** | ||||||
| hg38:Y:10845608-C-A | ** | ||||||
| hg38:Y:10880430-G-T | ** | ||||||
| hg38:Y:10880433-T-A | ** | ||||||
| hg19:Y:13488982-C-A hg38:Y:11333306-C-A | ** | ||||||
| hg38:Y:10899952-A-G | ** | ||||||
| hg19:Y:15914312-C-A hg38:Y:13802432-C-A | ** | ||||||
| hg38:Y:10785350-G-C | ** | ||||||
| hg19:Y:14998639-C-A hg38:Y:12886724-C-A | ** | ||||||
| hg19:Y:22483969-T-G hg38:Y:20322083-T-G | DYZ19 | ** | |||||
| hg19:Y:5172089-C-A hg38:Y:5304048-C-A | ** | ||||||
| hg38:Y:11023166-CCTCT-C | ** | ||||||
| hg38:Y:10983500-C-A | ** | ||||||
| hg19:Y:15873399-C-A hg38:Y:13761519-C-A | ** | ||||||
| hg38:Y:11031624-T-G | ** | ||||||
| hg19:Y:27894881-TATA-T hg38:Y:25748734-TATA-T | P1_Y2 | ** | |||||
| hg38:Y:10880403-G-A | ** | ||||||
| hg38:Y:10900026-C-CA | ** | ||||||
| hg19:Y:28779261-C-A hg38:Y:26633114-C-A | ** | ||||||
| hg38:Y:10669388-C-G | ** | ||||||
| hg19:Y:16491319-C-A hg38:Y:14379439-C-A | ** | ||||||
| hg19:Y:24016975-C-A hg38:Y:21870828-C-A | ** | ||||||
| hg38:Y:56837334-A-G | ** | ||||||
| hg38:Y:56837341-C-A | ** | ||||||
| hg38:Y:56837343-T-A | ** | ||||||
| hg19:Y:9991760-C-A hg38:Y:10154151-C-A | ** | ||||||
| hg19:Y:19216539-C-A hg38:Y:17104659-C-A | ** | ||||||
| hg19:Y:15830251-C-A hg38:Y:13718371-C-A | ** | ||||||
| hg19:Y:23438283-T-G hg38:Y:21276397-T-G | ** | ||||||
| hg38:Y:10845780-C-A | ** | ||||||
| hg38:Y:10878359-C-A | ** | ||||||
| hg19:Y:18619074-C-A hg38:Y:16507194-C-A | ** | ||||||
| hg19:Y:7203694-C-A hg38:Y:7335653-C-A | ** | ||||||
| hg38:Y:10685727-C-A | ** | ||||||
| hg19:Y:13463899-T-C hg38:Y:11308223-T-C | ** | ||||||
| hg19:Y:17360366-C-A hg38:Y:15248486-C-A | ** | ||||||
| hg19:Y:4076030-G-A hg38:Y:4207989-G-A | ** | ||||||
| hg19:Y:16180184-C-A hg38:Y:14068304-C-A | ** | ||||||
| hg38:Y:10776577-C-T | ** | ||||||
| hg38:Y:10776578-A-C | ** | ||||||
| hg38:Y:10776583-C-A | ** | ||||||
| hg19:Y:28788056-T-A hg38:Y:26641909-T-A | ** | ||||||
| hg19:Y:28788061-T-A hg38:Y:26641914-T-A | ** | ||||||
| hg19:Y:28788069-A-G hg38:Y:26641922-A-G | ** | ||||||
| hg19:Y:2885822-T-G hg38:Y:3017781-T-G | ** | ||||||
| hg19:Y:27985045-TA-T hg38:Y:25838898-TA-T | P1_Y2 | ** | |||||
| hg19:Y:13859364-G-C hg38:Y:11738658-G-C | DYZ17 | ** | |||||
| hg38:Y:10937492-A-T | ** | ||||||
| hg19:Y:18581318-AT-A hg38:Y:16469438-AT-A | 8×T | ** | |||||
| hg19:Y:14764338-C-A hg38:Y:12652407-C-A | ** | ||||||
| hg19:Y:23833082-C-A hg38:Y:21671196-C-A | ** | ||||||
| hg38:Y:11023178-C-T | ** | ||||||
| hg38:Y:11023183-T-G | ** | ||||||
| hg38:Y:11023192-A-T | ** | ||||||
| hg38:Y:11023208-G-T | ** | ||||||
| hg19:Y:14934386-G-A hg38:Y:12822451-G-A | ** | ||||||
| hg19:Y:6129808-C-A hg38:Y:6261767-C-A | ** | ||||||
| hg38:Y:10937494-A-T | ** | ||||||
| hg19:Y:16629393-C-CT hg38:Y:14517513-C-CT | 9×T | ** | |||||
| hg19:Y:14831742-C-A hg38:Y:12719809-C-A | ** | ||||||
| hg19:Y:14934385-T-C hg38:Y:12822450-T-C | ** | ||||||
| hg19:Y:14484992-G-T hg38:Y:12364261-G-T | ** | ||||||
| hg19:Y:22527033-C-CA hg38:Y:20365147-C-CA | 8×A | ** | |||||
| hg19:Y:22529878-A-AGG hg38:Y:20367992-A-AGG | 9×G | ** | |||||
| hg19:Y:14646313-C-A hg38:Y:12534377-C-A | ** | ||||||
| hg19:Y:19491242-C-A hg38:Y:17379362-C-A | ** | ||||||
| hg19:Y:21985220-C-A hg38:Y:19823334-C-A | ** | ||||||
| hg38:Y:56837319-C-A | ** | ||||||
| hg19:Y:16094716-C-A hg38:Y:13982836-C-A | ** | ||||||
| hg19:Y:21140068-C-A hg38:Y:18978182-C-A | ** | ||||||
| hg19:Y:13490853-C-A hg38:Y:11335177-C-A | ** | ||||||
| hg38:Y:10660022-T-A | ** | ||||||
| hg19:Y:15688921-C-A hg38:Y:13577041-C-A | ** | ||||||
| hg19:Y:19500535-T-C hg38:Y:17388655-T-C | ** | ||||||
| hg38:Y:10899920-G-C | ** | ||||||
| hg19:Y:22212248-C-A hg38:Y:20050362-C-A | FGC49905 | ** | |||||
| hg38:Y:11023131-C-G | ** | ||||||
| hg38:Y:11023140-T-TTCTCC | ** | ||||||
| hg38:Y:11023147-C-G | ** | ||||||
| hg38:Y:11023156-C-A | ** | ||||||
| hg38:Y:11023200-C-T | ** | ||||||
| hg19:Y:22658809-C-A hg38:Y:20496923-C-A | ** | ||||||
| hg38:Y:10669387-T-C | ** | ||||||
| hg19:Y:24424337-G-T hg38:Y:22278190-G-T | ** | ||||||
| hg19:Y:15361864-C-A hg38:Y:13249984-C-A | ** | ||||||
| hg19:Y:6774888-G-A hg38:Y:6906847-G-A | FT251104 | ** | |||||
| hg38:Y:10958901-C-A | ** | ||||||
| hg19:Y:22919354-G-T hg38:Y:20757468-G-T | ** | ||||||
| hg38:Y:10880413-T-A | ** | ||||||
| hg19:Y:16259087-C-A hg38:Y:14147207-C-A | ** | ||||||
| hg38:Y:10824155-TC-T | ** | ||||||
| hg19:Y:17278583-C-A hg38:Y:15166703-C-A | ** | ||||||
| hg19:Y:28798960-C-A hg38:Y:26652813-C-A | ** | ||||||
| hg19:Y:22483950-G-A hg38:Y:20322064-G-A | DYZ19 | ** | |||||
| hg38:Y:56834633-C-G | ** | ||||||
| hg19:Y:16422372-C-A hg38:Y:14310492-C-A | ** | ||||||
| hg19:Y:21856600-C-A hg38:Y:19694714-C-A | ** | ||||||
| hg19:Y:19048139-A-G hg38:Y:16936259-A-G | ** | ||||||
| hg19:Y:8013423-C-A hg38:Y:8145382-C-A | ** | ||||||
| hg19:Y:19673527-C-A hg38:Y:17561647-C-A | FT452300 | P5_Prx | ** | ||||
| hg38:Y:10785254-A-T | ** | ||||||
| hg19:Y:15770694-G-T hg38:Y:13658814-G-T | ** | ||||||
| hg19:Y:13579802-C-A hg38:Y:11424126-C-A | ** | ||||||
| hg19:Y:2697297-T-C hg38:Y:2829256-T-C | ** | ||||||
| hg19:Y:2860039-G-T hg38:Y:2991998-G-T | ** | ||||||
| hg19:Y:2885801-CA-G hg38:Y:3017760-CA-G | ** | ||||||
| hg19:Y:2885805-G-T hg38:Y:3017764-G-T | ** | ||||||
| hg19:Y:2885811-G-C hg38:Y:3017770-G-C | ** | ||||||
| hg19:Y:2885827-A-G hg38:Y:3017786-A-G | ** | ||||||
| hg19:Y:2885843-TG-T hg38:Y:3017802-TG-T | ** | ||||||
| hg19:Y:2929015-G-T hg38:Y:3060974-G-T | ** | ||||||
| hg19:Y:3175240-C-A hg38:Y:3307199-C-A | ** | ||||||
| hg19:Y:3835000-C-T hg38:Y:3966959-C-T | ** | ||||||
| hg19:Y:3965155-G-T hg38:Y:4097114-G-T | ** | ||||||
| hg19:Y:4049514-A-G hg38:Y:4181473-A-G | ** | ||||||
| hg19:Y:4076039-A-ACC hg38:Y:4207998-A-ACC | ** | ||||||
| hg19:Y:4395486-A-G hg38:Y:4527445-A-G | ** | ||||||
| hg19:Y:5490650-G-T hg38:Y:5622609-G-T | ** | ||||||
| hg19:Y:5905838-C-T hg38:Y:6037797-C-T | ** | ||||||
| hg19:Y:5969701-A-C hg38:Y:6101660-A-C | ** | ||||||
| hg19:Y:6178902-G-T hg38:Y:6310861-G-T | IR3_Dst | ** | |||||
| hg19:Y:6187358-G-T hg38:Y:6319317-G-T | IR3_Dst | ** | |||||
| hg19:Y:6231208-C-A hg38:Y:6363167-C-A | IR3_Dst | ** | |||||
| hg19:Y:6944143-T-C hg38:Y:7076102-T-C | ** | ||||||
| hg19:Y:6944157-A-G hg38:Y:7076116-A-G | ** | ||||||
| hg19:Y:6944158-T-C hg38:Y:7076117-T-C | ** | ||||||
| hg19:Y:6944159-G-A hg38:Y:7076118-G-A | ** | ||||||
| hg19:Y:7349894-C-A hg38:Y:7481853-C-A | ** | ||||||
| hg19:Y:7387833-T-C hg38:Y:7519792-T-C | ** | ||||||
| hg19:Y:7532292-ATATATATATATATATATATATATATATATAT-A hg38:Y:7664251-ATATATATATATATATATATATATATATATAT-A | ** | ||||||
| hg19:Y:7614038-G-C hg38:Y:7745997-G-C | ** | ||||||
| hg19:Y:8092751-C-A hg38:Y:8224710-C-A | ** | ||||||
| hg19:Y:8655539-C-G hg38:Y:8787498-C-G | ** | ||||||
| hg19:Y:8768628-CACACACACACACACACACAATGGAA-C hg38:Y:8900587-CACACACACACACACACACAATGGAA-C | ** | ||||||
| hg19:Y:8979135-C-A hg38:Y:9141526-C-A | ** | ||||||
| hg19:Y:9507010-C-A hg38:Y:9669401-C-A | ** | ||||||
| hg19:Y:9735504-C-A hg38:Y:9897895-C-A | IR3_Prx | ** | |||||
| hg19:Y:9798139-C-A hg38:Y:9960530-C-A | ** | ||||||
| hg38:Y:10660804-C-A | ** | ||||||
| hg38:Y:10755001-C-A | ** | ||||||
| hg38:Y:10773392-T-C | R2 | FGC77569 | ** | ||||
| hg38:Y:10824153-A-ACACGGC | ** | ||||||
| hg38:Y:10845622-T-TTTTAA | ** | ||||||
| hg38:Y:10877781-T-A | ** | ||||||
| hg38:Y:10880401-C-T | ** | ||||||
| hg38:Y:10880424-C-T | ** | ||||||
| hg38:Y:10880427-C-T | ** | ||||||
| hg38:Y:10894198-C-T | ** | ||||||
| hg38:Y:10894203-C-T | ** | ||||||
| hg38:Y:10894209-T-TC | ** | ||||||
| hg38:Y:10894213-CTG-C | ** | ||||||
| hg38:Y:10899924-A-T | ** | ||||||
| hg38:Y:10921792-C-A | ** | ||||||
| hg38:Y:10926242-G-A | ** | ||||||
| hg38:Y:11017606-C-T | ** | ||||||
| hg19:Y:13202874-C-A hg38:Y:11047198-C-A | ** | ||||||
| hg19:Y:13441672-ATCTATTCTTAAAAAAAATT-A hg38:Y:11285996-ATCTATTCTTAAAAAAAATT-A | ** | ||||||
| hg19:Y:13487880-G-A hg38:Y:11332204-G-A | ** | ||||||
| hg19:Y:13550928-T-C hg38:Y:11395252-T-C | ** | ||||||
| hg19:Y:13593911-G-C hg38:Y:11438235-G-C | FT219851 | ** | |||||
| hg19:Y:13643239-C-T hg38:Y:11487563-C-T | ** | ||||||
| hg38:Y:11652048-C-A | DYZ17 | ** | |||||
| hg19:Y:13845124-C-A hg38:Y:11724418-C-A | FTB39143 | DYZ17 | ** | ||||
| hg19:Y:13926658-CAGATTCA-C hg38:Y:11805952-CAGATTCA-C | ** | ||||||
| hg19:Y:14195769-C-A hg38:Y:12075063-C-A | ** | ||||||
| hg19:Y:14220088-C-A hg38:Y:12099382-C-A | ** | ||||||
| hg19:Y:14270192-A-G hg38:Y:12149486-A-G | ** | ||||||
| hg19:Y:14423333-C-A hg38:Y:12302608-C-A | ** | ||||||
| hg19:Y:14454335-C-A hg38:Y:12333608-C-A | ** | ||||||
| hg19:Y:14592309-C-A hg38:Y:12480509-C-A | ** | ||||||
| hg19:Y:14643632-G-A hg38:Y:12531701-G-A | ** | ||||||
| hg19:Y:14776041-C-A hg38:Y:12664110-C-A | ** | ||||||
| hg19:Y:14823425-G-T hg38:Y:12711492-G-T | ** | ||||||
| hg19:Y:14863143-G-A hg38:Y:12751209-G-A | ** | ||||||
| hg19:Y:14998687-C-A hg38:Y:12886772-C-A | ** | ||||||
| hg19:Y:15201756-C-A hg38:Y:13089842-C-A | ** | ||||||
| hg19:Y:15204612-C-A hg38:Y:13092698-C-A | ** | ||||||
| hg19:Y:15206096-A-C hg38:Y:13094182-A-C | ** | ||||||
| hg19:Y:15248862-C-A hg38:Y:13136948-C-A | ** | ||||||
| hg19:Y:15280073-A-G hg38:Y:13168172-A-G | ** | ||||||
| hg19:Y:15495863-T-TA hg38:Y:13383983-T-TA | 8×A | ** | |||||
| hg19:Y:15604141-CGT-C hg38:Y:13492261-CGT-C | ** | ||||||
| hg19:Y:15859545-C-A hg38:Y:13747665-C-A | ** | ||||||
| hg19:Y:15941027-A-G hg38:Y:13829147-A-G | ** | ||||||
| hg19:Y:16241923-C-A hg38:Y:14130043-C-A | ** | ||||||
| hg19:Y:16432049-G-A hg38:Y:14320169-G-A | ** | ||||||
| hg19:Y:16507991-A-G hg38:Y:14396111-A-G | ** | ||||||
| hg19:Y:16668192-T-C hg38:Y:14556312-T-C | ** | ||||||
| hg19:Y:16869062-T-C hg38:Y:14757182-T-C | ** | ||||||
| hg19:Y:16919363-T-A hg38:Y:14807483-T-A | ** | ||||||
| hg19:Y:16930887-C-A hg38:Y:14819007-C-A | ** | ||||||
| hg19:Y:17141859-A-G hg38:Y:15029979-A-G | ** | ||||||
| hg19:Y:17187564-ATC-A hg38:Y:15075684-ATC-A | ** | ||||||
| hg19:Y:17192993-A-T hg38:Y:15081113-A-T | ** | ||||||
| hg19:Y:17363343-C-A hg38:Y:15251463-C-A | ** | ||||||
| hg19:Y:17407889-A-G hg38:Y:15296009-A-G | ** | ||||||
| hg19:Y:17407896-C-A hg38:Y:15296016-C-A | ** | ||||||
| hg19:Y:17407904-T-C hg38:Y:15296024-T-C | ** | ||||||
| hg19:Y:17415278-C-A hg38:Y:15303398-C-A | FTB45830 | ** | |||||
| hg19:Y:17604489-G-T hg38:Y:15492609-G-T | ** | ||||||
| hg19:Y:17631062-C-A hg38:Y:15519182-C-A | ** | ||||||
| hg19:Y:17723929-G-T hg38:Y:15612049-G-T | ** | ||||||
| hg19:Y:17938941-C-A hg38:Y:15827061-C-A | ** | ||||||
| hg19:Y:18085983-G-T hg38:Y:15974103-G-T | ** | ||||||
| hg19:Y:18154496-T-C hg38:Y:16042616-T-C | ** | ||||||
| hg19:Y:18442768-G-T hg38:Y:16330888-G-T | P6_Dst | ** | |||||
| hg19:Y:18480202-C-A hg38:Y:16368322-C-A | P6_Dst | ** | |||||
| hg19:Y:18766691-T-C hg38:Y:16654811-T-C | ** | ||||||
| hg19:Y:18809740-C-A hg38:Y:16697860-C-A | ** | ||||||
| hg19:Y:19069814-C-A hg38:Y:16957934-C-A | ** | ||||||
| hg19:Y:19077158-T-C hg38:Y:16965278-T-C | ** | ||||||
| hg19:Y:19394213-A-G hg38:Y:17282333-A-G | ** | ||||||
| hg19:Y:19800980-T-A hg38:Y:17689100-T-A | P5_Prx | ** | |||||
| hg19:Y:19800986-T-A hg38:Y:17689106-T-A | P5_Prx | ** | |||||
| hg19:Y:19801000-T-A hg38:Y:17689120-T-A | P5_Prx | ** | |||||
| hg19:Y:19801026-G-C hg38:Y:17689146-G-C | P5_Prx | ** | |||||
| hg19:Y:19846567-T-A hg38:Y:17734687-T-A | P5_Prx | ** | |||||
| hg19:Y:21138539-AA-T hg38:Y:18976653-AA-T | ** | ||||||
| hg19:Y:21138558-C-T hg38:Y:18976672-C-T | ** | ||||||
| hg19:Y:21235759-C-A hg38:Y:19073873-C-A | ** | ||||||
| hg19:Y:21318225-T-A hg38:Y:19156339-T-A | ** | ||||||
| hg19:Y:22096451-C-A hg38:Y:19934565-C-A | ** | ||||||
| hg19:Y:22424295-G-A hg38:Y:20262409-G-A | DYZ19 | ** | |||||
| hg19:Y:22480559-A-C hg38:Y:20318673-A-C | DYZ19 | ** | |||||
| hg19:Y:23269569-T-C hg38:Y:21107683-T-C | ** | ||||||
| hg19:Y:23475824-A-G hg38:Y:21313938-A-G | ** | ||||||
| hg19:Y:24016938-A-T hg38:Y:21870791-A-T | ** | ||||||
| hg19:Y:24127480-A-G hg38:Y:21981333-A-G | P3_b1 | ** | |||||
| hg19:Y:24273750-A-C hg38:Y:22127603-A-C | P3_b1 | ** | |||||
| hg19:Y:25246366-C-A hg38:Y:23100219-C-A | P2_r1 | ** | |||||
| hg19:Y:27887820-G-T hg38:Y:25741673-G-T | P1_Y2 | ** | |||||
| hg19:Y:28688219-A-C hg38:Y:26542072-A-C | ** | ||||||
| hg38:Y:56828172-T-A | ** | ||||||
| hg38:Y:56829912-C-T | ** | ||||||
| hg38:Y:56837320-T-A | ** | ||||||
| hg38:Y:56838112-A-G | ** | ||||||
| hg38:Y2:19790-C-A | ** | ||||||
| hg38:Y2:23997-T-A | ** | ||||||
| hg19:Y:13477124-T-G hg38:Y:11321448-T-G | *** | ||||||
| hg19:Y:13477127-C-T hg38:Y:11321451-C-T | *** | ||||||
| hg19:Y:9515468-C-CT hg38:Y:9677859-C-CT | 10×T | *** | |||||
| hg19:Y:7225817-C-T hg38:Y:7357776-C-T | BY53630 | *** | |||||
| hg19:Y:58973847-T-C hg38:Y:56827700-T-C | *** | ||||||
| hg19:Y:17272467-TAA-T hg38:Y:15160587-TAA-T | 13×A | *** | |||||
| hg19:Y:8558485-G-GT hg38:Y:8690444-G-GT | 9×T | *** | |||||
| hg38:Y:10922225-TACCACTACAA-T | *** | ||||||
| hg38:Y:10922285-C-CTCCTT | *** | ||||||
| hg38:Y:10922296-T-C | *** | ||||||
| hg38:Y:10887950-T-A | *** | ||||||
| hg38:Y:10666934-C-G | *** | ||||||
| hg38:Y:10845705-C-T | *** | ||||||
| hg19:Y:4770267-G-T hg38:Y:4902226-G-T | *** | ||||||
| hg38:Y:10959285-A-T | *** | ||||||
| hg38:Y:10899966-C-T | *** | ||||||
| hg19:Y:22518753-TAAA-T hg38:Y:20356867-TAAA-T | 14×A | *** | |||||
| hg19:Y:15324342-TTTG-T hg38:Y:13212460-TTTG-T | *** | ||||||
| hg19:Y:18008663-T-G hg38:Y:15896783-T-G | P7_Dst | *** | |||||
| hg19:Y:13811174-C-A hg38:Y:11690468-C-A | DYZ17 | 5×AATGG | *** | ||||
| hg19:Y:19050103-C-A hg38:Y:16938223-C-A | *** | ||||||
| hg19:Y:14940073-CAA-C,CA hg38:Y:12828147-CAA-C,CA | 15×A | *** | |||||
| hg38:Y:10899950-C-T | *** | ||||||
| hg38:Y:56829465-C-A | *** | ||||||
| hg19:Y:7075240-CAA-C,CA hg38:Y:7207199-CAA-C,CA | 17×A | *** | |||||
| hg38:Y:10982325-A-G | *** | ||||||
| hg38:Y:10899932-A-G | *** | ||||||
| hg19:Y:25899748-C-T hg38:Y:23753601-C-T | P1_Y1 | *** | |||||
| hg38:Y:56830895-A-C | *** | ||||||
| hg38:Y:56830905-C-T | *** | ||||||
| hg38:Y:56830911-A-T | *** | ||||||
| hg38:Y:56830912-G-T | *** | ||||||
| hg38:Y:56830926-T-A | *** | ||||||
| hg19:Y:18426482-GA-G,GAA hg38:Y:16314602-GA-G,GAA | P6_Gap | 15×A | *** | ||||
| hg19:Y:21414510-A-AT hg38:Y:19252624-A-AT | 10×T | *** | |||||
| hg38:Y:10982327-A-T | *** | ||||||
| hg19:Y:15090155-C-A hg38:Y:12978244-C-A | *** | ||||||
| hg38:Y:10781331-T-TCCCAC | *** | ||||||
| hg19:Y:13477121-C-A hg38:Y:11321445-C-A | *** | ||||||
| hg19:Y:21560584-C-A hg38:Y:19398698-C-A | *** | ||||||
| hg19:Y:13478392-C-G hg38:Y:11322716-C-G | *** | ||||||
| hg19:Y:14093731-C-A hg38:Y:11973025-C-A | *** | ||||||
| hg19:Y:25899747-C-G hg38:Y:23753600-C-G | P1_Y1 | *** | |||||
| hg19:Y:13477114-G-A hg38:Y:11321438-G-A | *** | ||||||
| hg19:Y:13463917-G-GC hg38:Y:11308241-G-GC | *** | ||||||
| hg38:Y:56834541-TCCATA-T,TCCATG | *** | ||||||
| hg19:Y:2665141-C-CAA hg38:Y:2797100-C-CAA | 19×A | *** | |||||
| hg19:Y:16447158-AACACAC-A,AAC hg38:Y:14335278-AACACAC-A,AAC | 22×AC | *** | |||||
| hg19:Y:19266257-GAA-G hg38:Y:17154377-GAA-G | 14×A | *** | |||||
| hg19:Y:22979012-C-A hg38:Y:20817126-C-A | *** | ||||||
| hg38:Y:56833871-A-C | *** | ||||||
| hg19:Y:2649802-CAAAAAAAA-C,CAAAAAAA hg38:Y:2781761-CAAAAAAAA-C,CAAAAAAA | 24×A | *** | |||||
| hg19:Y:2752737-A-G hg38:Y:2884696-A-G | *** | ||||||
| hg19:Y:4770120-G-T hg38:Y:4902079-G-T | *** | ||||||
| hg19:Y:6857088-A-G hg38:Y:6989047-A-G | *** | ||||||
| hg19:Y:6869654-C-T hg38:Y:7001613-C-T | FT137141 | *** | |||||
| hg19:Y:6989410-C-T hg38:Y:7121369-C-T | *** | ||||||
| hg19:Y:7108918-C-A hg38:Y:7240877-C-A | *** | ||||||
| hg19:Y:7388764-GTGTATAA-G hg38:Y:7520723-GTGTATAA-G | *** | ||||||
| hg19:Y:7661354-T-C hg38:Y:7793313-T-C | *** | ||||||
| hg19:Y:8201918-C-A hg38:Y:8333877-C-A | *** | ||||||
| hg19:Y:8375039-C-A hg38:Y:8506998-C-A | *** | ||||||
| hg19:Y:8549032-GTTT-G,GT hg38:Y:8680991-GTTT-G,GT | 23×T | *** | |||||
| hg19:Y:8792613-A-G hg38:Y:8924572-A-G | *** | ||||||
| hg19:Y:9649570-C-A hg38:Y:9811961-C-A | IR3_Prx | *** | |||||
| hg38:Y:10765656-C-A | *** | ||||||
| hg38:Y:10922297-C-CCACTCTATT | *** | ||||||
| hg19:Y:13478556-T-A hg38:Y:11322880-T-A | *** | ||||||
| hg19:Y:13676984-GTCGTCAA-G hg38:Y:11521308-GTCGTCAA-G | DYZ17 | *** | |||||
| hg38:Y:11649523-G-A | DYZ17 | *** | |||||
| hg38:Y:11660206-G-A | FT294431 | DYZ17 | *** | ||||
| hg19:Y:13807197-T-G hg38:Y:11686491-T-G | DYZ17 | *** | |||||
| hg19:Y:14392195-C-A hg38:Y:12271491-C-A | *** | ||||||
| hg19:Y:14511779-C-A hg38:Y:12399984-C-A | *** | ||||||
| hg19:Y:14995746-C-A hg38:Y:12883831-C-A | *** | ||||||
| hg19:Y:15310580-T-C hg38:Y:13198685-T-C | *** | ||||||
| hg19:Y:15425448-C-A hg38:Y:13313568-C-A | *** | ||||||
| hg19:Y:15479000-A-G hg38:Y:13367120-A-G | *** | ||||||
| hg19:Y:15725745-C-A hg38:Y:13613865-C-A | FT212685 | *** | |||||
| hg19:Y:15847571-A-G hg38:Y:13735691-A-G | *** | ||||||
| hg19:Y:15993271-C-A hg38:Y:13881391-C-A | *** | ||||||
| hg19:Y:16648100-C-A hg38:Y:14536220-C-A | *** | ||||||
| hg19:Y:16775174-C-A hg38:Y:14663294-C-A | *** | ||||||
| hg19:Y:16821357-C-A hg38:Y:14709477-C-A | *** | ||||||
| hg19:Y:16821540-C-A hg38:Y:14709660-C-A | *** | ||||||
| hg19:Y:16872084-C-A hg38:Y:14760204-C-A | *** | ||||||
| hg19:Y:17185188-C-A hg38:Y:15073308-C-A | *** | ||||||
| hg19:Y:17209795-T-C hg38:Y:15097915-T-C | *** | ||||||
| hg19:Y:17380422-C-A hg38:Y:15268542-C-A | *** | ||||||
| hg19:Y:17648005-C-A hg38:Y:15536125-C-A | *** | ||||||
| hg19:Y:17871137-T-C hg38:Y:15759257-T-C | *** | ||||||
| hg19:Y:17929249-C-A hg38:Y:15817369-C-A | FT234429 | *** | |||||
| hg19:Y:18775091-G-A hg38:Y:16663211-G-A | *** | ||||||
| hg19:Y:18794809-C-G hg38:Y:16682929-C-G | *** | ||||||
| hg19:Y:18827858-T-C hg38:Y:16715978-T-C | *** | ||||||
| hg19:Y:19095140-A-T hg38:Y:16983260-A-T | *** | ||||||
| hg19:Y:19517460-T-C hg38:Y:17405580-T-C | *** | ||||||
| hg19:Y:21442750-T-C hg38:Y:19280864-T-C | *** | ||||||
| hg19:Y:21469261-T-C hg38:Y:19307375-T-C | *** | ||||||
| hg19:Y:21696147-T-C hg38:Y:19534261-T-C | *** | ||||||
| hg19:Y:21732663-CTTT-C,CTT hg38:Y:19570777-CTTT-C,CTT | 14×T | *** | |||||
| hg19:Y:22052828-C-T hg38:Y:19890942-C-T | *** | ||||||
| hg19:Y:22179239-AACTTAAT-A hg38:Y:20017353-AACTTAAT-A | *** | ||||||
| hg19:Y:22430038-T-A hg38:Y:20268152-T-A | DYZ19 | *** | |||||
| hg19:Y:22603421-A-G hg38:Y:20441535-A-G | *** | ||||||
| hg19:Y:22742999-AT-A hg38:Y:20581113-AT-A | *** | ||||||
| hg19:Y:22754715-T-G hg38:Y:20592829-T-G | *** | ||||||
| hg19:Y:23190682-C-A hg38:Y:21028796-C-A | *** | ||||||
| hg19:Y:23267750-GA-G,GAA hg38:Y:21105864-GA-G,GAA | 10×A | *** | |||||
| hg19:Y:23342200-C-A hg38:Y:21180314-C-A | *** | ||||||
| hg19:Y:23360428-GTATTATTATTATTATTATTAT-G hg38:Y:21198542-GTATTATTATTATTATTATTAT-G | 12×TAT | *** | |||||
| hg19:Y:23618425-C-A hg38:Y:21456539-C-A | *** | ||||||
| hg19:Y:25899746-C-T hg38:Y:23753599-C-T | P1_Y1 | *** | |||||
| hg19:Y:25899761-C-T hg38:Y:23753614-C-T | P1_Y1 | *** | |||||
| hg19:Y:27756278-C-A hg38:Y:25610131-C-A | P1_Y2 | *** | |||||
| hg19:Y:28510531-C-A hg38:Y:26364384-C-A | *** | ||||||
| hg19:Y:28758721-C-A hg38:Y:26612574-C-A | *** | ||||||
| hg38:Y:56836127-ACTCCG-A,ATTCCG | *** | ||||||
| hg38:Y:56842671-G-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: IN41259 | 8453434 | 6931331 | 6898128 |
| Used in age calculations | 8453434 | 6931331 | 6898128 |
| Counts of SNPs | 12 | 6 |
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