Beirne
BigY2: 117344MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 117344 |
|---|---|---|---|---|---|---|---|
| hg19:Y:19600439-G-GTA hg38:Y:17488559-G-GTA | P5_Prx | A* | |||||
| hg19:Y:28817571-C-A hg38:Y:26671424-C-A | A* | ||||||
| hg19:Y:6282263-A-T hg38:Y:6414222-A-T | IR3_Dst | A* | |||||
| hg19:Y:2781081-T-C hg38:Y:2913040-T-C | BY200883 | Y | Y | + | |||
| hg19:Y:13632647-T-A hg38:Y:11476971-T-A | BY210535 | + | |||||
| hg19:Y:19411974-A-G hg38:Y:17300094-A-G | FGC61678 | ** | |||||
| hg19:Y:18270306-G-T hg38:Y:16158426-G-T | ** | ||||||
| hg19:Y:7101128-T-C hg38:Y:7233087-T-C | ** | ||||||
| hg19:Y:6918444-G-A hg38:Y:7050403-G-A | ** | ||||||
| hg19:Y:6392568-C-A hg38:Y:6524527-C-A | ** | ||||||
| hg38:Y:10961593-A-C | ** | ||||||
| hg38:Y:10799545-C-A | ** | ||||||
| hg19:Y:19235208-C-A hg38:Y:17123328-C-A | ** | ||||||
| hg38:Y:10682749-TATTCC-T | ** | ||||||
| hg19:Y:18754952-G-T hg38:Y:16643072-G-T | ** | ||||||
| hg19:Y:28484793-A-C hg38:Y:26338646-A-C | ** | ||||||
| hg19:Y:6332662-AC-A hg38:Y:6464621-AC-A | IR3_Dst | ** | |||||
| hg19:Y:17379928-C-A hg38:Y:15268048-C-A | ** | ||||||
| hg19:Y:9700754-C-A hg38:Y:9863145-C-A | IR3_Prx | ** | |||||
| hg19:Y:14310400-C-A hg38:Y:12189694-C-A | ** | ||||||
| hg38:Y:10799559-T-A | ** | ||||||
| hg19:Y:9820490-T-C hg38:Y:9982881-T-C | ** | ||||||
| hg19:Y:17707254-G-A hg38:Y:15595374-G-A | ** | ||||||
| hg19:Y:16038150-G-A hg38:Y:13926270-G-A | A1487 | A18401 | ** | ||||
| hg19:Y:2862561-C-A hg38:Y:2994520-C-A | ** | ||||||
| hg19:Y:5761169-C-A hg38:Y:5893128-C-A | ** | ||||||
| hg19:Y:19105258-C-A hg38:Y:16993378-C-A | Y103643 | ** | |||||
| hg19:Y:8854420-G-T hg38:Y:8986379-G-T | ** | ||||||
| hg19:Y:13943051-C-A hg38:Y:11822345-C-A | FT236443 | ** | |||||
| hg19:Y:16042730-C-A hg38:Y:13930850-C-A | ** | ||||||
| hg38:Y:56840831-C-A | ** | ||||||
| hg38:Y:11024444-C-A | ** | ||||||
| hg38:Y:10964417-C-A | ** | ||||||
| hg38:Y:10651709-C-A | ** | ||||||
| hg38:Y:10841574-C-T | FT433646 | ** | |||||
| hg19:Y:17707234-G-A hg38:Y:15595354-G-A | ** | ||||||
| hg38:Y:10761741-G-T | ** | ||||||
| hg19:Y:21149536-C-A hg38:Y:18987650-C-A | ** | ||||||
| hg19:Y:13485605-T-C hg38:Y:11329929-T-C | ** | ||||||
| hg38:Y:10989054-C-T | ** | ||||||
| hg38:Y:10989066-C-T | ** | ||||||
| hg19:Y:15969954-C-A hg38:Y:13858074-C-A | ** | ||||||
| hg19:Y:4533808-C-A hg38:Y:4665767-C-A | ** | ||||||
| hg19:Y:17713837-G-T hg38:Y:15601957-G-T | ** | ||||||
| hg19:Y:20432865-CA-C hg38:Y:18270979-CA-C | P5_Dst | ** | |||||
| hg19:Y:14236056-G-A hg38:Y:12115350-G-A | ** | ||||||
| hg19:Y:8172710-G-T hg38:Y:8304669-G-T | ** | ||||||
| hg19:Y:2856414-C-A hg38:Y:2988373-C-A | ** | ||||||
| hg19:Y:14998183-C-A hg38:Y:12886268-C-A | ** | ||||||
| hg19:Y:19356463-C-A hg38:Y:17244583-C-A | ** | ||||||
| hg38:Y:10951875-C-A | ** | ||||||
| hg19:Y:6715289-C-A hg38:Y:6847248-C-A | ** | ||||||
| hg19:Y:4240720-C-A hg38:Y:4372679-C-A | ** | ||||||
| hg19:Y:14727362-C-T hg38:Y:12615430-C-T | ** | ||||||
| hg19:Y:14727363-A-G hg38:Y:12615431-A-G | ** | ||||||
| hg19:Y:16852886-C-A hg38:Y:14741006-C-A | ** | ||||||
| hg19:Y:17014753-C-A hg38:Y:14902873-C-A | ** | ||||||
| hg19:Y:21880969-T-C hg38:Y:19719083-T-C | ** | ||||||
| hg38:Y:10916424-G-T | ** | ||||||
| hg38:Y:56845473-C-A | ** | ||||||
| hg19:Y:15252757-C-A hg38:Y:13140843-C-A | ** | ||||||
| hg19:Y:5214408-C-T hg38:Y:5346367-C-T | ** | ||||||
| hg38:Y:10922319-C-A | ** | ||||||
| hg19:Y:15665720-T-C hg38:Y:13553840-T-C | ** | ||||||
| hg19:Y:22191619-G-T hg38:Y:20029733-G-T | ** | ||||||
| hg38:Y:10995856-T-A | ** | ||||||
| hg19:Y:15801701-C-A hg38:Y:13689821-C-A | ** | ||||||
| hg19:Y:15850977-C-A hg38:Y:13739097-C-A | ** | ||||||
| hg19:Y:19183564-A-G hg38:Y:17071684-A-G | ** | ||||||
| hg19:Y:13902272-C-A hg38:Y:11781566-C-A | ** | ||||||
| hg19:Y:14074058-C-A hg38:Y:11953352-C-A | ** | ||||||
| hg19:Y:17560470-C-A hg38:Y:15448590-C-A | ** | ||||||
| hg38:Y:10799548-T-A | ** | ||||||
| hg38:Y:10799567-T-C | ** | ||||||
| hg38:Y:10799571-ATTC-A | ** | ||||||
| hg19:Y:15665707-T-C hg38:Y:13553827-T-C | ** | ||||||
| hg19:Y:21127621-C-A hg38:Y:18965735-C-A | ** | ||||||
| hg19:Y:28560876-C-A hg38:Y:26414729-C-A | ** | ||||||
| hg38:Y:10821629-TTC-T | ** | ||||||
| hg38:Y:10821634-T-C | ** | ||||||
| hg38:Y:10821635-ACCG-A | ** | ||||||
| hg19:Y:7174270-T-C hg38:Y:7306229-T-C | ** | ||||||
| hg19:Y:6918461-A-G hg38:Y:7050420-A-G | ** | ||||||
| hg19:Y:8762123-C-A hg38:Y:8894082-C-A | ** | ||||||
| hg19:Y:21549297-T-C hg38:Y:19387411-T-C | ** | ||||||
| hg19:Y:6930419-C-A hg38:Y:7062378-C-A | ** | ||||||
| hg19:Y:14029050-C-A hg38:Y:11908344-C-A | ** | ||||||
| hg19:Y:28759505-C-A hg38:Y:26613358-C-A | ** | ||||||
| hg38:Y:10938130-ACCATT-A | ** | ||||||
| hg19:Y:18019167-C-A hg38:Y:15907287-C-A | ** | ||||||
| hg19:Y:8255868-A-G hg38:Y:8387827-A-G | ** | ||||||
| hg38:Y:10933939-G-T | ** | ||||||
| hg19:Y:18753164-G-T hg38:Y:16641284-G-T | ** | ||||||
| hg38:Y:10876538-C-A | ** | ||||||
| hg19:Y:28812364-C-T hg38:Y:26666217-C-T | ** | ||||||
| hg38:Y:10955287-A-T | ** | ||||||
| hg19:Y:6630723-T-C hg38:Y:6762682-T-C | ** | ||||||
| hg19:Y:15801709-A-G hg38:Y:13689829-A-G | ** | ||||||
| hg19:Y:3846968-C-A hg38:Y:3978927-C-A | ** | ||||||
| hg19:Y:14147829-T-C hg38:Y:12027123-T-C | ** | ||||||
| hg19:Y:17394576-C-A hg38:Y:15282696-C-A | ** | ||||||
| hg19:Y:14147830-G-A hg38:Y:12027124-G-A | ** | ||||||
| hg19:Y:15133387-C-A hg38:Y:13021474-C-A | ** | ||||||
| hg38:Y:10909797-T-G | ** | ||||||
| hg38:Y:10909803-T-A | ** | ||||||
| hg19:Y:24390010-C-T hg38:Y:22243863-C-T | ** | ||||||
| hg19:Y:18951826-C-A hg38:Y:16839946-C-A | ** | ||||||
| hg19:Y:15918419-C-A hg38:Y:13806539-C-A | ** | ||||||
| hg19:Y:17559707-T-C hg38:Y:15447827-T-C | ** | ||||||
| hg19:Y:19394059-C-CTT hg38:Y:17282179-C-CTT | 37×T | ** | |||||
| hg19:Y:7101147-T-C hg38:Y:7233106-T-C | ** | ||||||
| hg38:Y:10691937-C-A | ** | ||||||
| hg19:Y:17614036-ATT-A hg38:Y:15502156-ATT-A | 12×T | ** | |||||
| hg19:Y:7255047-C-A hg38:Y:7387006-C-A | ** | ||||||
| hg38:Y:10889909-C-T | ** | ||||||
| hg19:Y:14418183-T-A hg38:Y:12297458-T-A | ** | ||||||
| hg38:Y:11025322-C-A | ** | ||||||
| hg19:Y:17707250-G-A hg38:Y:15595370-G-A | ** | ||||||
| hg19:Y:7174269-A-C hg38:Y:7306228-A-C | Z37979 | ** | |||||
| hg19:Y:7174272-T-C hg38:Y:7306231-T-C | ** | ||||||
| hg19:Y:21182525-C-T hg38:Y:19020639-C-T | ** | ||||||
| hg38:Y:10843747-T-C | ** | ||||||
| hg19:Y:9798151-C-A hg38:Y:9960542-C-A | ** | ||||||
| hg19:Y:18003896-G-T hg38:Y:15892016-G-T | P7_Gap | ** | |||||
| hg19:Y:16783370-C-A hg38:Y:14671490-C-A | ** | ||||||
| hg19:Y:7019265-T-C hg38:Y:7151224-T-C | ** | ||||||
| hg19:Y:7869013-C-A hg38:Y:8000972-C-A | ** | ||||||
| hg19:Y:15801706-A-G hg38:Y:13689826-A-G | ** | ||||||
| hg19:Y:13485414-C-A hg38:Y:11329738-C-A | ** | ||||||
| hg19:Y:6630678-C-G hg38:Y:6762637-C-G | ** | ||||||
| hg19:Y:6630691-G-A hg38:Y:6762650-G-A | ** | ||||||
| hg19:Y:6630692-A-G hg38:Y:6762651-A-G | ** | ||||||
| hg19:Y:14315484-T-G hg38:Y:12194778-T-G | ** | ||||||
| hg19:Y:7938220-C-A hg38:Y:8070179-C-A | ** | ||||||
| hg19:Y:21915818-C-A hg38:Y:19753932-C-A | ** | ||||||
| hg19:Y:13460505-G-T hg38:Y:11304829-G-T | ** | ||||||
| hg19:Y:14950582-G-A hg38:Y:12838656-G-A | ** | ||||||
| hg19:Y:6630725-T-C hg38:Y:6762684-T-C | ** | ||||||
| hg19:Y:15801695-A-T hg38:Y:13689815-A-T | ** | ||||||
| hg38:Y:10955270-C-A | ** | ||||||
| hg19:Y:26422435-G-T hg38:Y:24276288-G-T | P1_Y1 | ** | |||||
| hg19:Y:2768123-G-T hg38:Y:2900082-G-T | ** | ||||||
| hg19:Y:14143269-C-A hg38:Y:12022563-C-A | FT413330 | ** | |||||
| hg19:Y:23827616-A-G hg38:Y:21665730-A-G | ** | ||||||
| hg19:Y:22103438-C-A hg38:Y:19941552-C-A | ** | ||||||
| hg19:Y:13613694-T-G hg38:Y:11458018-T-G | ** | ||||||
| hg19:Y:14089891-C-A hg38:Y:11969185-C-A | ** | ||||||
| hg19:Y:23007473-G-T hg38:Y:20845587-G-T | ** | ||||||
| hg19:Y:22808900-G-A hg38:Y:20647014-G-A | ** | ||||||
| hg19:Y:17339042-A-G hg38:Y:15227162-A-G | ** | ||||||
| hg19:Y:14694383-C-A hg38:Y:12582449-C-A | ** | ||||||
| hg19:Y:5274470-C-A hg38:Y:5406429-C-A | ** | ||||||
| hg38:Y:10821594-G-C | ** | ||||||
| hg38:Y:10821595-G-T | ** | ||||||
| hg38:Y:10821601-C-T | ** | ||||||
| hg38:Y:10821612-C-T | ** | ||||||
| hg38:Y:10821615-TCCATA-T | ** | ||||||
| hg19:Y:16852903-C-A hg38:Y:14741023-C-A | ** | ||||||
| hg38:Y:10983190-C-A | ** | ||||||
| hg19:Y:7019260-A-G hg38:Y:7151219-A-G | ** | ||||||
| hg19:Y:7970388-C-A hg38:Y:8102347-C-A | ** | ||||||
| hg19:Y:9820495-T-C hg38:Y:9982886-T-C | ** | ||||||
| hg19:Y:16171324-C-A hg38:Y:14059444-C-A | ** | ||||||
| hg19:Y:22766816-C-A hg38:Y:20604930-C-A | ** | ||||||
| hg38:Y:10995844-C-A | ** | ||||||
| hg19:Y:27997783-G-T hg38:Y:25851636-G-T | P1_Y2 | ** | |||||
| hg19:Y:21182534-A-G hg38:Y:19020648-A-G | ** | ||||||
| hg19:Y:22200400-C-A hg38:Y:20038514-C-A | ** | ||||||
| hg38:Y:10876462-C-A | ** | ||||||
| hg19:Y:2685703-G-GCAA hg38:Y:2817662-G-GCAA | ** | ||||||
| hg19:Y:2685707-TGGC-T hg38:Y:2817666-TGGC-T | ** | ||||||
| hg19:Y:2699730-C-T hg38:Y:2831689-C-T | ** | ||||||
| hg19:Y:2746831-C-T hg38:Y:2878790-C-T | ** | ||||||
| hg19:Y:2746841-T-C hg38:Y:2878800-T-C | ** | ||||||
| hg19:Y:2905807-T-C hg38:Y:3037766-T-C | ** | ||||||
| hg19:Y:3156397-G-T hg38:Y:3288356-G-T | ** | ||||||
| hg19:Y:3279615-G-C hg38:Y:3411574-G-C | ** | ||||||
| hg19:Y:3591308-C-A hg38:Y:3723267-C-A | ** | ||||||
| hg19:Y:3990723-T-C hg38:Y:4122682-T-C | ** | ||||||
| hg19:Y:4063760-G-T hg38:Y:4195719-G-T | ** | ||||||
| hg19:Y:4063801-C-T hg38:Y:4195760-C-T | ** | ||||||
| hg19:Y:4098950-G-T hg38:Y:4230909-G-T | ** | ||||||
| hg19:Y:4257503-C-T hg38:Y:4389462-C-T | ** | ||||||
| hg19:Y:4653312-C-A hg38:Y:4785271-C-A | ** | ||||||
| hg19:Y:4691917-G-T hg38:Y:4823876-G-T | ** | ||||||
| hg19:Y:4783937-T-C hg38:Y:4915896-T-C | ** | ||||||
| hg19:Y:4874729-A-G hg38:Y:5006688-A-G | ** | ||||||
| hg19:Y:5035556-G-T hg38:Y:5167515-G-T | ** | ||||||
| hg19:Y:5185500-T-C hg38:Y:5317459-T-C | ** | ||||||
| hg19:Y:5283269-G-T hg38:Y:5415228-G-T | ** | ||||||
| hg19:Y:5572813-G-T hg38:Y:5704772-G-T | ** | ||||||
| hg19:Y:5586208-C-A hg38:Y:5718167-C-A | ** | ||||||
| hg19:Y:6010456-T-C hg38:Y:6142415-T-C | ** | ||||||
| hg19:Y:6085964-C-A hg38:Y:6217923-C-A | ** | ||||||
| hg19:Y:6146451-C-A hg38:Y:6278410-C-A | IR3_Dst | ** | |||||
| hg19:Y:6410017-G-T hg38:Y:6541976-G-T | ** | ||||||
| hg19:Y:6422268-G-T hg38:Y:6554227-G-T | ** | ||||||
| hg19:Y:6621970-A-G hg38:Y:6753929-A-G | ** | ||||||
| hg19:Y:6630682-T-C hg38:Y:6762641-T-C | ** | ||||||
| hg19:Y:6630694-A-T hg38:Y:6762653-A-T | ** | ||||||
| hg19:Y:6630718-C-G hg38:Y:6762677-C-G | ** | ||||||
| hg19:Y:6693458-A-T hg38:Y:6825417-A-T | ** | ||||||
| hg19:Y:6873268-G-C hg38:Y:7005227-G-C | ** | ||||||
| hg19:Y:6873269-A-G hg38:Y:7005228-A-G | ** | ||||||
| hg19:Y:7101141-TG-T hg38:Y:7233100-TG-T | ** | ||||||
| hg19:Y:7115610-T-C hg38:Y:7247569-T-C | ** | ||||||
| hg19:Y:7115613-A-C hg38:Y:7247572-A-C | ** | ||||||
| hg19:Y:7115615-G-A hg38:Y:7247574-G-A | ** | ||||||
| hg19:Y:7115626-CAA-C hg38:Y:7247585-CAA-C | ** | ||||||
| hg19:Y:7174266-T-C hg38:Y:7306225-T-C | ** | ||||||
| hg19:Y:7174276-C-T hg38:Y:7306235-C-T | ** | ||||||
| hg19:Y:7174278-T-C hg38:Y:7306237-T-C | ** | ||||||
| hg19:Y:7217162-C-A hg38:Y:7349121-C-A | 14×T | ** | |||||
| hg19:Y:7261208-C-A hg38:Y:7393167-C-A | ** | ||||||
| hg19:Y:7266419-G-A hg38:Y:7398378-G-A | ** | ||||||
| hg19:Y:7374466-G-T hg38:Y:7506425-G-T | ** | ||||||
| hg19:Y:7382528-G-T hg38:Y:7514487-G-T | ** | ||||||
| hg19:Y:7412836-G-C hg38:Y:7544795-G-C | ** | ||||||
| hg19:Y:7434148-G-A hg38:Y:7566107-G-A | ** | ||||||
| hg19:Y:7655370-C-A hg38:Y:7787329-C-A | ** | ||||||
| hg19:Y:7780501-C-A hg38:Y:7912460-C-A | ** | ||||||
| hg19:Y:8000312-C-A hg38:Y:8132271-C-A | ** | ||||||
| hg19:Y:8124933-AAAGCG-A hg38:Y:8256892-AAAGCG-A | ** | ||||||
| hg19:Y:8170331-T-G hg38:Y:8302290-T-G | ** | ||||||
| hg19:Y:8170336-T-C hg38:Y:8302295-T-C | ** | ||||||
| hg19:Y:8172573-C-A hg38:Y:8304532-C-A | ** | ||||||
| hg19:Y:8658156-C-A hg38:Y:8790115-C-A | ** | ||||||
| hg19:Y:8713145-G-A hg38:Y:8845104-G-A | ** | ||||||
| hg19:Y:9020670-A-C hg38:Y:9183061-A-C | ** | ||||||
| hg19:Y:9029892-T-C hg38:Y:9192283-T-C | FT345896 | ** | |||||
| hg19:Y:9520163-A-G hg38:Y:9682554-A-G | ** | ||||||
| hg19:Y:9534255-G-T hg38:Y:9696646-G-T | IR3_Prx | ** | |||||
| hg19:Y:9885478-C-A hg38:Y:10047869-C-A | ** | ||||||
| hg19:Y:9954186-C-A hg38:Y:10116577-C-A | ** | ||||||
| hg38:Y:10673108-C-T | ** | ||||||
| hg38:Y:10689605-C-A | ** | ||||||
| hg38:Y:10764543-C-A | ** | ||||||
| hg38:Y:10765335-G-T | ** | ||||||
| hg38:Y:10785856-C-A | ** | ||||||
| hg38:Y:10818952-A-G | ** | ||||||
| hg38:Y:10832780-C-A | ** | ||||||
| hg38:Y:10840835-T-C | ** | ||||||
| hg38:Y:10845959-T-C | ** | ||||||
| hg38:Y:10845993-C-T | ** | ||||||
| hg38:Y:10850219-A-G | ** | ||||||
| hg38:Y:10861745-C-A | ** | ||||||
| hg38:Y:10865192-C-T | FT434633 | ** | |||||
| hg38:Y:10876466-TCTTCC-T | ** | ||||||
| hg38:Y:10926266-C-A | ** | ||||||
| hg38:Y:10932584-C-A | ** | ||||||
| hg38:Y:10936017-T-C | ** | ||||||
| hg38:Y:10949230-T-C | ** | ||||||
| hg38:Y:10955268-T-C | ** | ||||||
| hg38:Y:10955299-T-C | ** | ||||||
| hg38:Y:10976343-C-A | ** | ||||||
| hg38:Y:10994598-C-A | ** | ||||||
| hg38:Y:10994603-C-G | ** | ||||||
| hg38:Y:10994608-C-G | ** | ||||||
| hg38:Y:11025178-C-A | ** | ||||||
| hg38:Y:11033427-C-A | ** | ||||||
| hg19:Y:13196736-C-A hg38:Y:11041060-C-A | ** | ||||||
| hg19:Y:13306287-G-A hg38:Y:11150611-G-A | ** | ||||||
| hg19:Y:13315088-T-G hg38:Y:11159412-T-G | ** | ||||||
| hg19:Y:13461873-C-T hg38:Y:11306197-C-T | ** | ||||||
| hg19:Y:13523554-C-T hg38:Y:11367878-C-T | ** | ||||||
| hg19:Y:13578474-A-G hg38:Y:11422798-A-G | ** | ||||||
| hg19:Y:13625200-G-T hg38:Y:11469524-G-T | ** | ||||||
| hg19:Y:13705479-TGGAATGGAATGGAA-T hg38:Y:11549803-TGGAATGGAATGGAA-T | DYZ17 | ** | |||||
| hg19:Y:13705494-TGGAATG-T hg38:Y:11549818-TGGAATG-T | DYZ17 | ** | |||||
| hg19:Y:13716964-G-T hg38:Y:11561288-G-T | DYZ17 | ** | |||||
| hg38:Y:11673680-T-A | DYZ17 | ** | |||||
| hg19:Y:13859339-G-T hg38:Y:11738633-G-T | DYZ17 | ** | |||||
| hg19:Y:13954343-G-T hg38:Y:11833637-G-T | ** | ||||||
| hg19:Y:14009220-C-A hg38:Y:11888514-C-A | ** | ||||||
| hg19:Y:14195105-G-T hg38:Y:12074399-G-T | ** | ||||||
| hg19:Y:14295713-G-A hg38:Y:12175007-G-A | ** | ||||||
| hg19:Y:14326586-AAGGT-A hg38:Y:12205880-AAGGT-A | ** | ||||||
| hg19:Y:14393766-T-C hg38:Y:12273062-T-C | ** | ||||||
| hg19:Y:14443792-C-A hg38:Y:12323065-C-A | ** | ||||||
| hg19:Y:14461425-C-A hg38:Y:12340698-C-A | ** | ||||||
| hg19:Y:14465482-C-A hg38:Y:12344755-C-A | ** | ||||||
| hg19:Y:14569805-C-A hg38:Y:12458005-C-A | ** | ||||||
| hg19:Y:14751195-C-A hg38:Y:12639264-C-A | ** | ||||||
| hg19:Y:14826002-T-G hg38:Y:12714069-T-G | ** | ||||||
| hg19:Y:14826006-A-C hg38:Y:12714073-A-C | ** | ||||||
| hg19:Y:14831710-C-A hg38:Y:12719777-C-A | ** | ||||||
| hg19:Y:14953595-A-T hg38:Y:12841669-A-T | ** | ||||||
| hg19:Y:14955515-C-A hg38:Y:12843590-C-A | ** | ||||||
| hg19:Y:15011859-G-T hg38:Y:12899947-G-T | ** | ||||||
| hg19:Y:15130694-T-C hg38:Y:13018781-T-C | ** | ||||||
| hg19:Y:15132154-C-A hg38:Y:13020241-C-A | ** | ||||||
| hg19:Y:15193677-A-G hg38:Y:13081763-A-G | ** | ||||||
| hg19:Y:15276362-G-A hg38:Y:13164451-G-A | ** | ||||||
| hg19:Y:15446117-T-A hg38:Y:13334237-T-A | ** | ||||||
| hg19:Y:15665673-G-T hg38:Y:13553793-G-T | ** | ||||||
| hg19:Y:15665708-G-A hg38:Y:13553828-G-A | ** | ||||||
| hg19:Y:15779887-C-A hg38:Y:13668007-C-A | ** | ||||||
| hg19:Y:15801708-C-T hg38:Y:13689828-C-T | ** | ||||||
| hg19:Y:15888124-G-T hg38:Y:13776244-G-T | ** | ||||||
| hg19:Y:16050890-C-T hg38:Y:13939010-C-T | ** | ||||||
| hg19:Y:16400042-C-A hg38:Y:14288162-C-A | ** | ||||||
| hg19:Y:16406924-A-G hg38:Y:14295044-A-G | ** | ||||||
| hg19:Y:16566457-C-A hg38:Y:14454577-C-A | ** | ||||||
| hg19:Y:16849956-C-T hg38:Y:14738076-C-T | ** | ||||||
| hg19:Y:16922265-C-A hg38:Y:14810385-C-A | ** | ||||||
| hg19:Y:17099000-C-A hg38:Y:14987120-C-A | ** | ||||||
| hg19:Y:17127386-C-A hg38:Y:15015506-C-A | ** | ||||||
| hg19:Y:17231575-G-T hg38:Y:15119695-G-T | ** | ||||||
| hg19:Y:17538177-G-T hg38:Y:15426297-G-T | ** | ||||||
| hg19:Y:17600374-T-C hg38:Y:15488494-T-C | ** | ||||||
| hg19:Y:17707238-G-T hg38:Y:15595358-G-T | ** | ||||||
| hg19:Y:17707272-G-A hg38:Y:15595392-G-A | ** | ||||||
| hg19:Y:17735658-C-A hg38:Y:15623778-C-A | ** | ||||||
| hg19:Y:17763999-C-T hg38:Y:15652119-C-T | ** | ||||||
| hg19:Y:17844290-T-C hg38:Y:15732410-T-C | ** | ||||||
| hg19:Y:17865238-A-T hg38:Y:15753358-A-T | ** | ||||||
| hg19:Y:17865257-T-C hg38:Y:15753377-T-C | ** | ||||||
| hg19:Y:18682802-G-T hg38:Y:16570922-G-T | ** | ||||||
| hg19:Y:18695978-C-A hg38:Y:16584098-C-A | ** | ||||||
| hg19:Y:18698566-C-A hg38:Y:16586686-C-A | ** | ||||||
| hg19:Y:18768249-C-A hg38:Y:16656369-C-A | ** | ||||||
| hg19:Y:18844632-G-T hg38:Y:16732752-G-T | ** | ||||||
| hg19:Y:19014426-A-G hg38:Y:16902546-A-G | ** | ||||||
| hg19:Y:19161032-A-G hg38:Y:17049152-A-G | ** | ||||||
| hg19:Y:19183558-A-G hg38:Y:17071678-A-G | ** | ||||||
| hg19:Y:19183575-C-T hg38:Y:17071695-C-T | ** | ||||||
| hg19:Y:19258471-C-A hg38:Y:17146591-C-A | ** | ||||||
| hg19:Y:19313590-G-A hg38:Y:17201710-G-A | ** | ||||||
| hg19:Y:19319807-CA-C hg38:Y:17207927-CA-C | ** | ||||||
| hg19:Y:19480057-G-A hg38:Y:17368177-G-A | ** | ||||||
| hg19:Y:20432310-A-AGGG hg38:Y:18270424-A-AGGG | P5_Dst | ** | |||||
| hg19:Y:20611353-G-T hg38:Y:18449467-G-T | P5_Dst | ** | |||||
| hg19:Y:21163173-C-T hg38:Y:19001287-C-T | ** | ||||||
| hg19:Y:21182491-C-T hg38:Y:19020605-C-T | ** | ||||||
| hg19:Y:21182494-C-T hg38:Y:19020608-C-T | ** | ||||||
| hg19:Y:21182504-G-A hg38:Y:19020618-G-A | ** | ||||||
| hg19:Y:21182510-C-G hg38:Y:19020624-C-G | ** | ||||||
| hg19:Y:21182538-C-T hg38:Y:19020652-C-T | ** | ||||||
| hg19:Y:21212804-T-A hg38:Y:19050918-T-A | ** | ||||||
| hg19:Y:21411575-C-A hg38:Y:19249689-C-A | ** | ||||||
| hg19:Y:21584485-G-T hg38:Y:19422599-G-T | ** | ||||||
| hg19:Y:21713876-C-A hg38:Y:19551990-C-A | ** | ||||||
| hg19:Y:21738463-C-A hg38:Y:19576577-C-A | ** | ||||||
| hg19:Y:22020638-C-A hg38:Y:19858752-C-A | ** | ||||||
| hg19:Y:22068176-C-A hg38:Y:19906290-C-A | ** | ||||||
| hg19:Y:22296105-G-T hg38:Y:20134219-G-T | DYZ19 | ** | |||||
| hg19:Y:22420704-A-T hg38:Y:20258818-A-T | DYZ19 | ** | |||||
| hg19:Y:22571758-C-A hg38:Y:20409872-C-A | ** | ||||||
| hg19:Y:22715093-C-A hg38:Y:20553207-C-A | ** | ||||||
| hg19:Y:22720588-T-C hg38:Y:20558702-T-C | ** | ||||||
| hg19:Y:22749396-G-A hg38:Y:20587510-G-A | ** | ||||||
| hg19:Y:22835466-C-A hg38:Y:20673580-C-A | ** | ||||||
| hg19:Y:23299690-C-A hg38:Y:21137804-C-A | ** | ||||||
| hg19:Y:23576904-T-C hg38:Y:21415018-T-C | ** | ||||||
| hg19:Y:23845815-G-T hg38:Y:21683929-G-T | ** | ||||||
| hg19:Y:24267343-C-A hg38:Y:22121196-C-A | P3_b1 | ** | |||||
| hg19:Y:24301454-A-AG hg38:Y:22155307-A-AG | P3_t1 | ** | |||||
| hg19:Y:24390026-C-T hg38:Y:22243879-C-T | ** | ||||||
| hg19:Y:24390032-C-CT hg38:Y:22243885-C-CT | ** | ||||||
| hg19:Y:24880292-T-C hg38:Y:22734145-T-C | g1 | ** | |||||
| hg19:Y:26138729-C-A hg38:Y:23992582-C-A | P1_Y1 | ** | |||||
| hg19:Y:26248327-C-A hg38:Y:24102180-C-A | P1_Y1 | ** | |||||
| hg19:Y:27699843-T-A hg38:Y:25553696-T-A | P1_Y2 | ** | |||||
| hg19:Y:28111562-G-A hg38:Y:25965415-G-A | P1_Y2 | ** | |||||
| hg19:Y:28514863-G-C hg38:Y:26368716-G-C | ** | ||||||
| hg19:Y:28588360-G-T hg38:Y:26442213-G-T | ** | ||||||
| hg19:Y:28657054-C-G hg38:Y:26510907-C-G | ** | ||||||
| hg19:Y:28657057-T-G hg38:Y:26510910-T-G | ** | ||||||
| hg19:Y:28719451-G-T hg38:Y:26573304-G-T | ** | ||||||
| hg38:Y:56847020-C-A | ** | ||||||
| hg19:Y:13487795-G-C hg38:Y:11332119-G-C | *** | ||||||
| hg38:Y:10851630-C-A | *** | ||||||
| hg38:Y:11025912-C-A | *** | ||||||
| hg19:Y:21068497-C-A hg38:Y:18906611-C-A | *** | ||||||
| hg38:Y:56838057-G-T | *** | ||||||
| hg38:Y:10986309-C-T | *** | ||||||
| hg19:Y:15656887-C-A hg38:Y:13545007-C-A | *** | ||||||
| hg19:Y:22584150-TATTA-T hg38:Y:20422264-TATTA-T | *** | ||||||
| hg19:Y:23439734-CT-C hg38:Y:21277848-CT-C | 9×T | *** | |||||
| hg19:Y:2803380-TCCTC-T hg38:Y:2935339-TCCTC-T | *** | ||||||
| hg38:Y:10808585-C-A | *** | ||||||
| hg38:Y:10677299-C-A | *** | ||||||
| hg19:Y:22832917-C-A hg38:Y:20671031-C-A | *** | ||||||
| hg19:Y:18897113-C-A hg38:Y:16785233-C-A | *** | ||||||
| hg19:Y:28674559-CT-C hg38:Y:26528412-CT-C | 9×T | *** | |||||
| hg19:Y:17781045-C-A hg38:Y:15669165-C-A | Y100207 | *** | |||||
| hg19:Y:21476607-C-A hg38:Y:19314721-C-A | *** | ||||||
| hg19:Y:21737974-GA-G,GAA hg38:Y:19576088-GA-G,GAA | 12×A | *** | |||||
| hg19:Y:2725128-CAA-C hg38:Y:2857087-CAA-C | 11×A | *** | |||||
| hg19:Y:15305031-C-A hg38:Y:13193130-C-A | *** | ||||||
| hg19:Y:24480109-C-A hg38:Y:22333962-C-A | *** | ||||||
| hg19:Y:18750304-G-T hg38:Y:16638424-G-T | *** | ||||||
| hg19:Y:22132216-C-A hg38:Y:19970330-C-A | *** | ||||||
| hg19:Y:18406025-C-A hg38:Y:16294145-C-A | P6_Gap | *** | |||||
| hg19:Y:15309808-C-CA hg38:Y:13197913-C-CA | *** | ||||||
| hg19:Y:21656902-C-A hg38:Y:19495016-C-A | *** | ||||||
| hg19:Y:14950595-G-A hg38:Y:12838669-G-A | *** | ||||||
| hg19:Y:7187584-CTTTT-C hg38:Y:7319543-CTTTT-C | 15×T | *** | |||||
| hg19:Y:2717059-C-A hg38:Y:2849018-C-A | *** | ||||||
| hg19:Y:6362328-T-C hg38:Y:6494287-T-C | *** | ||||||
| hg19:Y:6678725-C-A hg38:Y:6810684-C-A | *** | ||||||
| hg19:Y:6915861-T-C hg38:Y:7047820-T-C | *** | ||||||
| hg19:Y:6915863-C-G hg38:Y:7047822-C-G | *** | ||||||
| hg19:Y:7435030-C-A hg38:Y:7566989-C-A | *** | ||||||
| hg19:Y:7861302-C-A hg38:Y:7993261-C-A | *** | ||||||
| hg19:Y:8138302-C-A hg38:Y:8270261-C-A | *** | ||||||
| hg19:Y:8262706-C-A hg38:Y:8394665-C-A | *** | ||||||
| hg19:Y:9027664-C-T hg38:Y:9190055-C-T | *** | ||||||
| hg19:Y:9036524-C-A hg38:Y:9198915-C-A | *** | ||||||
| hg19:Y:9070208-C-A hg38:Y:9232599-C-A | *** | ||||||
| hg19:Y:9136831-C-A hg38:Y:9299222-C-A | *** | ||||||
| hg19:Y:9166835-G-A hg38:Y:9329226-G-A | *** | ||||||
| hg19:Y:10023835-C-T hg38:Y:10186226-C-T | *** | ||||||
| hg38:Y:10693918-ACATTC-A | *** | ||||||
| hg38:Y:10765275-C-T | *** | ||||||
| hg38:Y:10765279-C-T | *** | ||||||
| hg38:Y:10765295-C-T | *** | ||||||
| hg38:Y:10865276-C-A | *** | ||||||
| hg38:Y:10887674-C-A | *** | ||||||
| hg38:Y:10906817-A-G | *** | ||||||
| hg19:Y:13482410-C-A hg38:Y:11326734-C-A | *** | ||||||
| hg19:Y:14372899-C-A hg38:Y:12252195-C-A | *** | ||||||
| hg19:Y:14754058-C-A hg38:Y:12642127-C-A | *** | ||||||
| hg19:Y:14841973-T-C hg38:Y:12730040-T-C | *** | ||||||
| hg19:Y:14849189-A-G hg38:Y:12737255-A-G | *** | ||||||
| hg19:Y:14950607-T-C hg38:Y:12838681-T-C | *** | ||||||
| hg19:Y:15238452-T-C hg38:Y:13126538-T-C | *** | ||||||
| hg19:Y:15338666-C-A hg38:Y:13226784-C-A | *** | ||||||
| hg19:Y:15479561-G-A hg38:Y:13367681-G-A | *** | ||||||
| hg19:Y:16959988-C-A hg38:Y:14848108-C-A | *** | ||||||
| hg19:Y:17387593-C-A hg38:Y:15275713-C-A | *** | ||||||
| hg19:Y:18243116-G-T hg38:Y:16131236-G-T | *** | ||||||
| hg19:Y:18413256-C-A hg38:Y:16301376-C-A | P6_Gap | *** | |||||
| hg19:Y:18569495-C-A hg38:Y:16457615-C-A | *** | ||||||
| hg19:Y:18719054-G-T hg38:Y:16607174-G-T | *** | ||||||
| hg19:Y:18737392-C-T hg38:Y:16625512-C-T | *** | ||||||
| hg19:Y:19126750-C-T hg38:Y:17014870-C-T | 8×T | *** | |||||
| hg19:Y:21046137-G-T hg38:Y:18884251-G-T | *** | ||||||
| hg19:Y:21149529-T-A hg38:Y:18987643-T-A | *** | ||||||
| hg19:Y:21371733-A-G hg38:Y:19209847-A-G | *** | ||||||
| hg19:Y:21510852-C-A hg38:Y:19348966-C-A | *** | ||||||
| hg19:Y:22020585-T-A hg38:Y:19858699-T-A | *** | ||||||
| hg19:Y:22036041-C-A hg38:Y:19874155-C-A | *** | ||||||
| hg19:Y:22127551-T-A hg38:Y:19965665-T-A | *** | ||||||
| hg19:Y:22527968-G-A hg38:Y:20366082-G-A | *** | ||||||
| hg19:Y:22720815-C-A hg38:Y:20558929-C-A | *** | ||||||
| hg19:Y:23540631-TA-T hg38:Y:21378745-TA-T | 8×A | *** | |||||
| hg19:Y:23745368-A-G hg38:Y:21583482-A-G | *** | ||||||
| hg19:Y:23745385-G-T hg38:Y:21583499-G-T | *** | ||||||
| hg19:Y:23807869-C-A hg38:Y:21645983-C-A | *** | ||||||
| hg19:Y:23997640-C-A hg38:Y:21851493-C-A | *** | ||||||
| hg19:Y:24331310-C-A hg38:Y:22185163-C-A | P3_t1 | *** | |||||
| hg19:Y:24450804-C-A hg38:Y:22304657-C-A | *** | ||||||
| hg19:Y:27053574-A-G hg38:Y:24907427-A-G | P1_r4 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 117344 | 8801638 | 7186594 | 7132374 |
| Used in age calculations | 8801638 | 7186594 | 7132374 |
| Counts of SNPs | 1 | 1 |
Big Tree Main Page