Short
BigY2: 201125Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 201125 |
|---|---|---|---|---|---|---|---|
| hg19:Y:8421824-C-T hg38:Y:8553783-C-T | BY72569 | Y | Y | + | |||
| hg19:Y:7915944-G-C hg38:Y:8047903-G-C | BY200365 | Y | Y | + | |||
| hg19:Y:15224867-G-C hg38:Y:13112953-G-C | BY200412 | Y | + | ||||
| hg19:Y:17337164-A-G hg38:Y:15225284-A-G | BY198384 | Y | Y | + | |||
| hg19:Y:17980511-T-A hg38:Y:15868631-T-A | BY200822 | Y | + | ||||
| hg19:Y:9030397-G-A hg38:Y:9192788-G-A | ** | ||||||
| hg19:Y:7139178-TACAC-T hg38:Y:7271137-TACAC-T | 12×AC | ** | |||||
| hg19:Y:13309699-C-A hg38:Y:11154023-C-A | ** | ||||||
| hg19:Y:21884524-C-A hg38:Y:19722638-C-A | ** | ||||||
| hg19:Y:22203556-C-G hg38:Y:20041670-C-G | F3308 M2277 S24122 | ** | |||||
| hg19:Y:21462718-C-A hg38:Y:19300832-C-A | ** | ||||||
| hg19:Y:13482575-A-G hg38:Y:11326899-A-G | ** | ||||||
| hg19:Y:14698385-C-T hg38:Y:12586451-C-T | FGC3831 | ** | |||||
| hg38:Y:10751009-T-C | ** | ||||||
| hg38:Y:10751025-A-G | ** | ||||||
| hg19:Y:18256212-C-A hg38:Y:16144332-C-A | ** | ||||||
| hg19:Y:4134018-C-A hg38:Y:4265977-C-A | ** | ||||||
| hg19:Y:13859414-G-A hg38:Y:11738708-G-A | FTB20328 | DYZ17 | ** | ||||
| hg19:Y:18929949-C-A hg38:Y:16818069-C-A | ** | ||||||
| hg19:Y:22097244-C-A hg38:Y:19935358-C-A | ** | ||||||
| hg19:Y:17638290-C-A hg38:Y:15526410-C-A | ** | ||||||
| hg38:Y:10761198-A-G | ** | ||||||
| hg19:Y:7277696-C-A hg38:Y:7409655-C-A | ** | ||||||
| hg19:Y:19310217-C-A hg38:Y:17198337-C-A | ** | ||||||
| hg19:Y:14007365-C-A hg38:Y:11886659-C-A | ** | ||||||
| hg38:Y:10926552-A-C | ** | ||||||
| hg19:Y:20998374-C-A hg38:Y:18836488-C-A | P4_Dst | ** | |||||
| hg19:Y:9539234-G-T hg38:Y:9701625-G-T | IR3_Prx | ** | |||||
| hg19:Y:21316999-C-A hg38:Y:19155113-C-A | ** | ||||||
| hg19:Y:13482561-T-C hg38:Y:11326885-T-C | ** | ||||||
| hg19:Y:23039583-C-A hg38:Y:20877697-C-A | ** | ||||||
| hg38:Y:10950527-C-T | ** | ||||||
| hg38:Y:10877360-C-A | ** | ||||||
| hg38:Y:10826506-GTC-G | ** | ||||||
| hg19:Y:15392192-C-A hg38:Y:13280312-C-A | ** | ||||||
| hg19:Y:22122901-C-A hg38:Y:19961015-C-A | ** | ||||||
| hg19:Y:14938626-G-T hg38:Y:12826701-G-T | ** | ||||||
| hg19:Y:19244766-C-A hg38:Y:17132886-C-A | ** | ||||||
| hg38:Y:10952532-T-A | ** | ||||||
| hg19:Y:16823910-C-A hg38:Y:14712030-C-A | ** | ||||||
| hg19:Y:23188680-C-A hg38:Y:21026794-C-A | ** | ||||||
| hg38:Y:21752710-G-T | ** | ||||||
| hg19:Y:13859417-A-G hg38:Y:11738711-A-G | DYZ17 | ** | |||||
| hg38:Y:10987824-CAT-C | ** | ||||||
| hg38:Y:10889348-C-A | ** | ||||||
| hg38:Y:10885270-CCATTG-C | ** | ||||||
| hg19:Y:18747179-C-T hg38:Y:16635299-C-T | FTB12179 | ** | |||||
| hg19:Y:21912047-C-A hg38:Y:19750161-C-A | ** | ||||||
| hg19:Y:6465312-C-A hg38:Y:6597271-C-A | ** | ||||||
| hg19:Y:14059362-C-A hg38:Y:11938656-C-A | ** | ||||||
| hg19:Y:18687352-C-A hg38:Y:16575472-C-A | ** | ||||||
| hg19:Y:15374614-C-T hg38:Y:13262734-C-T | ** | ||||||
| hg38:Y:10807311-C-T | ** | ||||||
| hg38:Y:10885258-T-G | ** | ||||||
| hg19:Y:16874845-C-A hg38:Y:14762965-C-A | ** | ||||||
| hg19:Y:13565037-C-A hg38:Y:11409361-C-A | FT445410 | ** | |||||
| hg19:Y:5851942-C-A hg38:Y:5983901-C-A | ** | ||||||
| hg38:Y:10996354-G-A | FT439665 | ** | |||||
| hg19:Y:9978594-C-A hg38:Y:10140985-C-A | FT44693 | ** | |||||
| hg19:Y:18763707-A-G hg38:Y:16651827-A-G | ** | ||||||
| hg19:Y:7756797-C-A hg38:Y:7888756-C-A | ** | ||||||
| hg38:Y:10660069-G-T | ** | ||||||
| hg19:Y:6541314-C-A hg38:Y:6673273-C-A | ** | ||||||
| hg19:Y:10015063-C-A hg38:Y:10177454-C-A | ** | ||||||
| hg38:Y:10866346-C-A | ** | ||||||
| hg38:Y:10977125-T-A | ** | ||||||
| hg38:Y:10977145-C-A | ** | ||||||
| hg38:Y:10764277-C-A | ** | ||||||
| hg38:Y:10885255-C-A | ** | ||||||
| hg19:Y:15650561-C-A hg38:Y:13538681-C-A | ** | ||||||
| hg19:Y:24422478-CAA-C hg38:Y:22276331-CAA-C | 43×A | ** | |||||
| hg19:Y:14324922-A-T hg38:Y:12204216-A-T | ** | ||||||
| hg38:Y:10928212-C-A | ** | ||||||
| hg38:Y:10825082-C-A | ** | ||||||
| hg38:Y:10936238-A-T | ** | ||||||
| hg19:Y:13240513-C-A hg38:Y:11084837-C-A | ** | ||||||
| hg19:Y:23098092-C-A hg38:Y:20936206-C-A | ** | ||||||
| hg19:Y:22962433-TTG-T hg38:Y:20800547-TTG-T | ** | ||||||
| hg19:Y:16523036-C-A hg38:Y:14411156-C-A | ** | ||||||
| hg38:Y:11648166-C-A | DYZ17 | ** | |||||
| hg19:Y:19536958-C-A hg38:Y:17425078-C-A | ** | ||||||
| hg38:Y:11016227-C-A | ** | ||||||
| hg38:Y:10864035-GCCATT-G | ** | ||||||
| hg19:Y:19259081-C-A hg38:Y:17147201-C-A | ** | ||||||
| hg19:Y:16344560-C-A hg38:Y:14232680-C-A | ** | ||||||
| hg19:Y:7401934-C-A hg38:Y:7533893-C-A | ** | ||||||
| hg19:Y:21771609-C-A hg38:Y:19609723-C-A | ** | ||||||
| hg19:Y:15412874-G-A hg38:Y:13300994-G-A | ** | ||||||
| hg38:Y:10758030-C-A | ** | ||||||
| hg38:Y:10935555-T-G | ** | ||||||
| hg19:Y:19544317-C-A hg38:Y:17432437-C-A | ** | ||||||
| hg19:Y:21874859-C-A hg38:Y:19712973-C-A | ** | ||||||
| hg19:Y:23419021-C-A hg38:Y:21257135-C-A | ** | ||||||
| hg19:Y:18955753-C-A hg38:Y:16843873-C-A | ** | ||||||
| hg19:Y:14457952-C-A hg38:Y:12337225-C-A | ** | ||||||
| hg19:Y:21813923-C-A hg38:Y:19652037-C-A | ** | ||||||
| hg19:Y:7103386-C-A hg38:Y:7235345-C-A | ** | ||||||
| hg19:Y:14090724-C-A hg38:Y:11970018-C-A | ** | ||||||
| hg38:Y:10936248-A-C | ** | ||||||
| hg19:Y:27647734-C-A hg38:Y:25501587-C-A | P1_Y2 | ** | |||||
| hg19:Y:10032114-C-A hg38:Y:10194505-C-A | ** | ||||||
| hg19:Y:23808168-A-G hg38:Y:21646282-A-G | ** | ||||||
| hg19:Y:15271047-GAAAAA-G hg38:Y:13159136-GAAAAA-G | 19×A | ** | |||||
| hg19:Y:22770884-C-A hg38:Y:20608998-C-A | ** | ||||||
| hg19:Y:23808172-G-A hg38:Y:21646286-G-A | ** | ||||||
| hg38:Y:10952456-A-C | ** | ||||||
| hg38:Y:10952470-C-T | ** | ||||||
| hg38:Y:10952472-T-G | ** | ||||||
| hg38:Y:10952494-C-G | ** | ||||||
| hg38:Y:10952541-A-T | ** | ||||||
| hg19:Y:3841557-C-A hg38:Y:3973516-C-A | ** | ||||||
| hg38:Y:10648047-C-A | ** | ||||||
| hg19:Y:16186521-A-C hg38:Y:14074641-A-C | ** | ||||||
| hg19:Y:6757840-T-G hg38:Y:6889799-T-G | ** | ||||||
| hg19:Y:9776197-C-T hg38:Y:9938588-C-T | ** | ||||||
| hg38:Y:10955248-T-G | ** | ||||||
| hg19:Y:14521815-C-A hg38:Y:12410016-C-A | ** | ||||||
| hg19:Y:17650262-C-A hg38:Y:15538382-C-A | ** | ||||||
| hg19:Y:21691724-A-T hg38:Y:19529838-A-T | ** | ||||||
| hg19:Y:7670976-C-A hg38:Y:7802935-C-A | ** | ||||||
| hg19:Y:15584690-C-A hg38:Y:13472810-C-A | ** | ||||||
| hg19:Y:23011190-G-T hg38:Y:20849304-G-T | ** | ||||||
| hg19:Y:15392201-G-C hg38:Y:13280321-G-C | ** | ||||||
| hg19:Y:7285324-C-A hg38:Y:7417283-C-A | ** | ||||||
| hg19:Y:22785721-C-A hg38:Y:20623835-C-A | ** | ||||||
| hg19:Y:13202753-C-A hg38:Y:11047077-C-A | ** | ||||||
| hg19:Y:16749972-C-A hg38:Y:14638092-C-A | ** | ||||||
| hg19:Y:22949780-C-A hg38:Y:20787894-C-A | ** | ||||||
| hg38:Y:10995648-C-A | ** | ||||||
| hg19:Y:17669282-C-A hg38:Y:15557402-C-A | ** | ||||||
| hg19:Y:18724989-C-A hg38:Y:16613109-C-A | ** | ||||||
| hg19:Y:18158506-C-A hg38:Y:16046626-C-A | ** | ||||||
| hg19:Y:7306244-C-A hg38:Y:7438203-C-A | BY64473 | ** | |||||
| hg19:Y:14546970-C-A hg38:Y:12435171-C-A | ** | ||||||
| hg19:Y:14714703-C-A hg38:Y:12602770-C-A | ** | ||||||
| hg19:Y:18020362-C-A hg38:Y:15908482-C-A | ** | ||||||
| hg38:Y:10971059-C-A | ** | ||||||
| hg19:Y:5864525-C-A hg38:Y:5996484-C-A | ** | ||||||
| hg19:Y:21909628-C-A hg38:Y:19747742-C-A | ** | ||||||
| hg19:Y:19466581-C-A hg38:Y:17354701-C-A | ** | ||||||
| hg19:Y:10022032-C-A hg38:Y:10184423-C-A | ** | ||||||
| hg19:Y:5199996-C-A hg38:Y:5331955-C-A | ** | ||||||
| hg19:Y:15392200-T-C hg38:Y:13280320-T-C | ** | ||||||
| hg19:Y:2668981-C-A hg38:Y:2800940-C-A | ** | ||||||
| hg19:Y:2869009-G-T hg38:Y:3000968-G-T | ** | ||||||
| hg19:Y:2884331-C-T hg38:Y:3016290-C-T | ** | ||||||
| hg19:Y:3016267-A-G hg38:Y:3148226-A-G | ** | ||||||
| hg19:Y:3652896-G-T hg38:Y:3784855-G-T | ** | ||||||
| hg19:Y:4103251-C-T hg38:Y:4235210-C-T | ** | ||||||
| hg19:Y:4170216-C-A hg38:Y:4302175-C-A | ** | ||||||
| hg19:Y:4717449-G-A hg38:Y:4849408-G-A | ** | ||||||
| hg19:Y:5080994-C-A hg38:Y:5212953-C-A | ** | ||||||
| hg19:Y:5330748-G-A hg38:Y:5462707-G-A | ** | ||||||
| hg19:Y:5412231-T-C hg38:Y:5544190-T-C | ** | ||||||
| hg19:Y:5844989-C-A hg38:Y:5976948-C-A | ** | ||||||
| hg19:Y:6273351-TTTTTTGC-T hg38:Y:6405310-TTTTTTGC-T | IR3_Dst | ** | |||||
| hg19:Y:6402314-C-A hg38:Y:6534273-C-A | ** | ||||||
| hg19:Y:6454559-C-T hg38:Y:6586518-C-T | ** | ||||||
| hg19:Y:6674736-A-G hg38:Y:6806695-A-G | ** | ||||||
| hg19:Y:6757848-T-G hg38:Y:6889807-T-G | ** | ||||||
| hg19:Y:6784970-G-A hg38:Y:6916929-G-A | ** | ||||||
| hg19:Y:6793577-A-T hg38:Y:6925536-A-T | ** | ||||||
| hg19:Y:6956502-G-A hg38:Y:7088461-G-A | ** | ||||||
| hg19:Y:6984680-C-T hg38:Y:7116639-C-T | ** | ||||||
| hg19:Y:7029558-G-A hg38:Y:7161517-G-A | ** | ||||||
| hg19:Y:7082662-A-G hg38:Y:7214621-A-G | ** | ||||||
| hg19:Y:7109320-GCTAAGACTAT-G hg38:Y:7241279-GCTAAGACTAT-G | ** | ||||||
| hg19:Y:7160371-G-A hg38:Y:7292330-G-A | ** | ||||||
| hg19:Y:7201485-T-A hg38:Y:7333444-T-A | ** | ||||||
| hg19:Y:7242735-C-A hg38:Y:7374694-C-A | ** | ||||||
| hg19:Y:7363090-A-G hg38:Y:7495049-A-G | ** | ||||||
| hg19:Y:7365544-C-T hg38:Y:7497503-C-T | FTA22748 | ** | |||||
| hg19:Y:7700583-A-G hg38:Y:7832542-A-G | ** | ||||||
| hg19:Y:7725838-T-G hg38:Y:7857797-T-G | ** | ||||||
| hg19:Y:7783137-C-A hg38:Y:7915096-C-A | ** | ||||||
| hg19:Y:7864101-T-C hg38:Y:7996060-T-C | ** | ||||||
| hg19:Y:8022743-T-G hg38:Y:8154702-T-G | ** | ||||||
| hg19:Y:8216608-C-T hg38:Y:8348567-C-T | ** | ||||||
| hg19:Y:8437454-T-C hg38:Y:8569413-T-C | FTB75632 | ** | |||||
| hg19:Y:8810184-G-A hg38:Y:8942143-G-A | ** | ||||||
| hg19:Y:8819116-C-A hg38:Y:8951075-C-A | ** | ||||||
| hg19:Y:8913681-G-T hg38:Y:9045640-G-T | ** | ||||||
| hg38:Y:9055544-G-T | ** | ||||||
| hg19:Y:9023454-G-T hg38:Y:9185845-G-T | ** | ||||||
| hg19:Y:9093391-G-T hg38:Y:9255782-G-T | ** | ||||||
| hg19:Y:9372099-TGATTTCATATAAGAATGA-T hg38:Y:9534490-TGATTTCATATAAGAATGA-T | ** | ||||||
| hg19:Y:9733652-G-T hg38:Y:9896043-G-T | IR3_Prx | ** | |||||
| hg19:Y:9776207-A-G hg38:Y:9938598-A-G | ** | ||||||
| hg19:Y:9776208-G-A hg38:Y:9938599-G-A | ** | ||||||
| hg19:Y:9870265-G-A hg38:Y:10032656-G-A | FT146206 | ** | |||||
| hg19:Y:9887053-C-A hg38:Y:10049444-C-A | ** | ||||||
| hg19:Y:10033276-C-A hg38:Y:10195667-C-A | ** | ||||||
| hg38:Y:10687884-C-A | ** | ||||||
| hg38:Y:10748824-C-A | ** | ||||||
| hg38:Y:10756958-T-C | ** | ||||||
| hg38:Y:10779335-T-C | ** | ||||||
| hg38:Y:10791221-C-A | ** | ||||||
| hg38:Y:10826512-C-CA | ** | ||||||
| hg38:Y:10831504-T-C | ** | ||||||
| hg38:Y:10847616-TCACTC-T | ** | ||||||
| hg38:Y:10911597-C-A | ** | ||||||
| hg38:Y:10925800-C-T | ** | ||||||
| hg38:Y:10925806-C-G | ** | ||||||
| hg38:Y:10928980-C-A | ** | ||||||
| hg38:Y:10952506-A-C | ** | ||||||
| hg38:Y:10952520-C-A | ** | ||||||
| hg38:Y:10952529-C-G | ** | ||||||
| hg38:Y:10962910-ATCCATTCCATTCCATTCCAT-A | ** | ||||||
| hg38:Y:10965492-C-T | FT48529 | ** | |||||
| hg38:Y:11012465-T-C | ** | ||||||
| hg19:Y:13307337-G-A hg38:Y:11151661-G-A | ** | ||||||
| hg19:Y:13409814-C-G hg38:Y:11254138-C-G | ** | ||||||
| hg19:Y:13482577-C-T hg38:Y:11326901-C-T | ** | ||||||
| hg19:Y:13482589-C-T hg38:Y:11326913-C-T | ** | ||||||
| hg19:Y:13566351-T-C hg38:Y:11410675-T-C | ** | ||||||
| hg19:Y:13643137-T-A hg38:Y:11487461-T-A | ** | ||||||
| hg19:Y:13961263-C-A hg38:Y:11840557-C-A | ** | ||||||
| hg19:Y:13962819-C-A hg38:Y:11842113-C-A | ** | ||||||
| hg19:Y:13976713-G-T hg38:Y:11856007-G-T | ** | ||||||
| hg19:Y:14041702-A-G hg38:Y:11920996-A-G | ** | ||||||
| hg19:Y:14253628-CTTT-C hg38:Y:12132922-CTTT-C | 11×T | ** | |||||
| hg19:Y:14273337-C-T hg38:Y:12152631-C-T | ** | ||||||
| hg19:Y:14449400-C-A hg38:Y:12328673-C-A | ** | ||||||
| hg19:Y:14458494-G-A hg38:Y:12337767-G-A | ** | ||||||
| hg19:Y:14485333-G-T hg38:Y:12364602-G-T | ** | ||||||
| hg19:Y:14817505-C-A hg38:Y:12705576-C-A | ** | ||||||
| hg19:Y:14951472-T-C hg38:Y:12839546-T-C | ** | ||||||
| hg19:Y:15232777-C-A hg38:Y:13120863-C-A | ** | ||||||
| hg19:Y:15259249-A-C hg38:Y:13147333-A-C | ** | ||||||
| hg19:Y:15270186-G-C hg38:Y:13158275-G-C | FT269960 | ** | |||||
| hg19:Y:15347045-T-A hg38:Y:13235164-T-A | ** | ||||||
| hg19:Y:15392196-G-T hg38:Y:13280316-G-T | ** | ||||||
| hg19:Y:15430585-A-T hg38:Y:13318705-A-T | ** | ||||||
| hg19:Y:15452134-G-A hg38:Y:13340254-G-A | ** | ||||||
| hg19:Y:15477315-G-T hg38:Y:13365435-G-T | ** | ||||||
| hg19:Y:15507477-C-A hg38:Y:13395597-C-A | ** | ||||||
| hg19:Y:15565858-T-C hg38:Y:13453978-T-C | ** | ||||||
| hg19:Y:15580351-T-C hg38:Y:13468471-T-C | ** | ||||||
| hg19:Y:15580356-A-C hg38:Y:13468476-A-C | ** | ||||||
| hg19:Y:15585195-A-G hg38:Y:13473315-A-G | ** | ||||||
| hg19:Y:15642710-C-A hg38:Y:13530830-C-A | ** | ||||||
| hg19:Y:15699996-C-T hg38:Y:13588116-C-T | ** | ||||||
| hg19:Y:15775223-C-A hg38:Y:13663343-C-A | ** | ||||||
| hg19:Y:15776250-G-T hg38:Y:13664370-G-T | FT86902 | ** | |||||
| hg19:Y:15952177-T-G hg38:Y:13840297-T-G | ** | ||||||
| hg19:Y:15993739-C-A hg38:Y:13881859-C-A | ** | ||||||
| hg19:Y:16063640-G-T hg38:Y:13951760-G-T | ** | ||||||
| hg19:Y:16197361-C-A hg38:Y:14085481-C-A | ** | ||||||
| hg19:Y:16226164-C-A hg38:Y:14114284-C-A | ** | ||||||
| hg19:Y:16276118-T-A hg38:Y:14164238-T-A | ** | ||||||
| hg19:Y:16354852-C-T hg38:Y:14242972-C-T | ** | ||||||
| hg19:Y:16422346-C-A hg38:Y:14310466-C-A | ** | ||||||
| hg19:Y:16552694-G-A hg38:Y:14440814-G-A | ** | ||||||
| hg19:Y:16638888-C-A hg38:Y:14527008-C-A | ** | ||||||
| hg19:Y:16765665-G-A hg38:Y:14653785-G-A | ** | ||||||
| hg19:Y:16933382-C-A hg38:Y:14821502-C-A | ** | ||||||
| hg19:Y:17128561-A-T hg38:Y:15016681-A-T | ** | ||||||
| hg19:Y:17380618-C-A hg38:Y:15268738-C-A | ** | ||||||
| hg19:Y:17383582-A-T hg38:Y:15271702-A-T | ** | ||||||
| hg19:Y:17403440-C-A hg38:Y:15291560-C-A | ** | ||||||
| hg19:Y:17580924-C-A hg38:Y:15469044-C-A | ** | ||||||
| hg19:Y:17603269-C-A hg38:Y:15491389-C-A | ** | ||||||
| hg19:Y:18086166-A-T hg38:Y:15974286-A-T | ** | ||||||
| hg19:Y:18220010-C-A hg38:Y:16108130-C-A | ** | ||||||
| hg19:Y:18281109-A-G hg38:Y:16169229-A-G | P6_Prx | ** | |||||
| hg19:Y:18395342-A-G hg38:Y:16283462-A-G | P6_Gap | ** | |||||
| hg19:Y:18395344-A-G hg38:Y:16283464-A-G | P6_Gap | ** | |||||
| hg19:Y:18395345-A-G hg38:Y:16283465-A-G | P6_Gap | ** | |||||
| hg19:Y:18395350-T-C hg38:Y:16283470-T-C | P6_Gap | ** | |||||
| hg19:Y:18577915-C-A hg38:Y:16466035-C-A | ** | ||||||
| hg19:Y:18580503-G-C hg38:Y:16468623-G-C | ** | ||||||
| hg19:Y:18631965-G-A hg38:Y:16520085-G-A | ** | ||||||
| hg19:Y:18783056-A-C hg38:Y:16671176-A-C | ** | ||||||
| hg19:Y:18785971-C-A hg38:Y:16674091-C-A | ** | ||||||
| hg19:Y:18936203-C-A hg38:Y:16824323-C-A | ** | ||||||
| hg19:Y:19023272-C-A hg38:Y:16911392-C-A | ** | ||||||
| hg19:Y:19226689-C-A hg38:Y:17114809-C-A | ** | ||||||
| hg19:Y:19304640-GA-G hg38:Y:17192760-GA-G | ** | ||||||
| hg19:Y:19330278-C-T hg38:Y:17218398-C-T | ** | ||||||
| hg19:Y:19392590-C-A hg38:Y:17280710-C-A | ** | ||||||
| hg19:Y:19394117-C-A hg38:Y:17282237-C-A | ** | ||||||
| hg19:Y:19418304-C-A hg38:Y:17306424-C-A | ** | ||||||
| hg19:Y:19457647-C-A hg38:Y:17345767-C-A | ** | ||||||
| hg19:Y:20470321-C-A hg38:Y:18308435-C-A | P5_Dst | ** | |||||
| hg19:Y:20473631-TG-T hg38:Y:18311745-TG-T | P5_Dst | ** | |||||
| hg19:Y:20755617-C-A hg38:Y:18593731-C-A | P4_Prx | ** | |||||
| hg19:Y:20888552-G-T hg38:Y:18726666-G-T | P4_Dst | ** | |||||
| hg19:Y:21035040-A-C hg38:Y:18873154-A-C | ** | ||||||
| hg19:Y:21071805-C-A hg38:Y:18909919-C-A | ** | ||||||
| hg19:Y:21076170-A-G hg38:Y:18914284-A-G | ** | ||||||
| hg19:Y:21110001-G-T hg38:Y:18948115-G-T | ** | ||||||
| hg19:Y:21355531-C-A hg38:Y:19193645-C-A | ** | ||||||
| hg19:Y:21437415-C-A hg38:Y:19275529-C-A | ** | ||||||
| hg19:Y:21492932-TGTGTAGTATTCAATG-T hg38:Y:19331046-TGTGTAGTATTCAATG-T | ** | ||||||
| hg19:Y:21654128-C-A hg38:Y:19492242-C-A | ** | ||||||
| hg19:Y:21773848-T-C hg38:Y:19611962-T-C | ** | ||||||
| hg19:Y:21884376-G-A hg38:Y:19722490-G-A | ** | ||||||
| hg19:Y:22127375-C-A hg38:Y:19965489-C-A | ** | ||||||
| hg19:Y:22172925-G-A hg38:Y:20011039-G-A | FT54870 | ** | |||||
| hg19:Y:22793035-C-A hg38:Y:20631149-C-A | ** | ||||||
| hg19:Y:22916852-C-A hg38:Y:20754966-C-A | ** | ||||||
| hg19:Y:22965298-C-A hg38:Y:20803412-C-A | ** | ||||||
| hg19:Y:22979190-C-A hg38:Y:20817304-C-A | ** | ||||||
| hg19:Y:23047843-C-A hg38:Y:20885957-C-A | ** | ||||||
| hg19:Y:23420448-C-A hg38:Y:21258562-C-A | ** | ||||||
| hg19:Y:23431504-C-A hg38:Y:21269618-C-A | ** | ||||||
| hg19:Y:23597036-C-T hg38:Y:21435150-C-T | ** | ||||||
| hg19:Y:23597040-C-T hg38:Y:21435154-C-T | ** | ||||||
| hg19:Y:23823745-A-G hg38:Y:21661859-A-G | ** | ||||||
| hg19:Y:24363958-A-G hg38:Y:22217811-A-G | ** | ||||||
| hg19:Y:24429866-C-A hg38:Y:22283719-C-A | ** | ||||||
| hg19:Y:25938207-G-A hg38:Y:23792060-G-A | P1_Y1 | ** | |||||
| hg19:Y:26089781-G-T hg38:Y:23943634-G-T | P1_Y1 | ** | |||||
| hg19:Y:26478067-C-T hg38:Y:24331920-C-T | P1_Y1 | ** | |||||
| hg19:Y:27829103-A-T hg38:Y:25682956-A-T | P1_Y2 | ** | |||||
| hg19:Y:28547566-G-A hg38:Y:26401419-G-A | ** | ||||||
| hg19:Y:28559565-A-C hg38:Y:26413418-A-C | ** | ||||||
| hg19:Y:28613164-G-A hg38:Y:26467017-G-A | ** | ||||||
| hg19:Y:28674312-C-A hg38:Y:26528165-C-A | ** | ||||||
| hg19:Y:28698431-T-A hg38:Y:26552284-T-A | ** | ||||||
| hg19:Y:28767053-C-A hg38:Y:26620906-C-A | ** | ||||||
| hg19:Y:28779028-C-A hg38:Y:26632881-C-A | ** | ||||||
| hg19:Y:28797906-TG-T hg38:Y:26651759-TG-T | ** | ||||||
| hg38:Y:56830282-C-T | ** | ||||||
| hg38:Y:56830317-C-T | ** | ||||||
| hg38:Y:56830325-C-A | ** | ||||||
| hg38:Y:56830328-C-G | ** | ||||||
| hg19:Y:14293968-T-A hg38:Y:12173262-T-A | YSC0000170 PF4694 | *** | |||||
| hg19:Y:13475142-G-A hg38:Y:11319466-G-A | A20220 | *** | |||||
| hg19:Y:17275741-GA-G hg38:Y:15163861-GA-G | 9×A | *** | |||||
| hg38:Y:10878326-C-T | *** | ||||||
| hg19:Y:13845459-G-GA hg38:Y:11724753-G-GA | DYZ17 | 9×A | *** | ||||
| hg38:Y:10895820-C-G | *** | ||||||
| hg19:Y:13461830-G-A hg38:Y:11306154-G-A | *** | ||||||
| hg19:Y:16863543-AT-A,ATT hg38:Y:14751663-AT-A,ATT | 14×T | *** | |||||
| hg38:Y:10657401-A-G | *** | ||||||
| hg38:Y:11643749-G-GTAACAC | DYZ17 | *** | |||||
| hg38:Y:10926596-C-A | *** | ||||||
| hg19:Y:17608453-C-A hg38:Y:15496573-C-A | *** | ||||||
| hg19:Y:13462478-C-A hg38:Y:11306802-C-A | *** | ||||||
| hg38:Y:10958434-C-A | *** | ||||||
| hg38:Y:10766437-C-A | *** | ||||||
| hg19:Y:13839844-C-A hg38:Y:11719138-C-A | DYZ17 | *** | |||||
| hg19:Y:17201762-CT-C,CTT hg38:Y:15089882-CT-C,CTT | 16×T | *** | |||||
| hg19:Y:7032333-ATTTTTT-A hg38:Y:7164292-ATTTTTT-A | 22×T | *** | |||||
| hg19:Y:17417034-C-A hg38:Y:15305154-C-A | *** | ||||||
| hg19:Y:8479399-CTTTT-C,CTT hg38:Y:8611358-CTTTT-C,CTT | 18×T | *** | |||||
| hg38:Y:11643788-G-A | DYZ17 | *** | |||||
| hg19:Y:19480684-C-A hg38:Y:17368804-C-A | *** | ||||||
| hg19:Y:13461777-T-C hg38:Y:11306101-T-C | *** | ||||||
| hg38:Y:10831536-C-T | *** | ||||||
| hg19:Y:7988099-CTT-C,CT hg38:Y:8120058-CTT-C,CT | 14×T | *** | |||||
| hg38:Y:10918312-G-T | *** | ||||||
| hg19:Y:13472136-T-G hg38:Y:11316460-T-G | *** | ||||||
| hg19:Y:15669964-CAAAAA-C,CAA hg38:Y:13558084-CAAAAA-C,CAA | 18×A | *** | |||||
| hg19:Y:14485159-G-T hg38:Y:12364428-G-T | *** | ||||||
| hg19:Y:2656493-C-A hg38:Y:2788452-C-A | *** | ||||||
| hg19:Y:6429040-CA-C hg38:Y:6560999-CA-C | 9×A | *** | |||||
| hg19:Y:14392715-C-A hg38:Y:12272011-C-A | *** | ||||||
| hg19:Y:14772676-ATTTTT-A hg38:Y:12660745-ATTTTT-A | 21×T | *** | |||||
| hg38:Y:10987890-A-T | *** | ||||||
| hg19:Y:4567312-CA-C,CAA hg38:Y:4699271-CA-C,CAA | 13×A | *** | |||||
| hg38:Y:10996682-C-A | *** | ||||||
| hg19:Y:14751693-C-A hg38:Y:12639762-C-A | *** | ||||||
| hg38:Y:56825849-G-T | *** | ||||||
| hg19:Y:15966830-C-A hg38:Y:13854950-C-A | *** | ||||||
| hg19:Y:15864143-C-A hg38:Y:13752263-C-A | *** | ||||||
| hg19:Y:17878492-C-A hg38:Y:15766612-C-A | FGC32742 | *** | |||||
| hg19:Y:13478357-T-A hg38:Y:11322681-T-A | *** | ||||||
| hg19:Y:3620861-G-T hg38:Y:3752820-G-T | *** | ||||||
| hg19:Y:3853783-T-C hg38:Y:3985742-T-C | *** | ||||||
| hg19:Y:6134675-G-T hg38:Y:6266634-G-T | *** | ||||||
| hg19:Y:6744011-C-A hg38:Y:6875970-C-A | *** | ||||||
| hg19:Y:6935126-C-A hg38:Y:7067085-C-A | *** | ||||||
| hg19:Y:7103231-C-A hg38:Y:7235190-C-A | *** | ||||||
| hg19:Y:7157837-CT-C hg38:Y:7289796-CT-C | *** | ||||||
| hg19:Y:7168657-C-T hg38:Y:7300616-C-T | *** | ||||||
| hg19:Y:7222372-C-A hg38:Y:7354331-C-A | *** | ||||||
| hg19:Y:7294255-T-C hg38:Y:7426214-T-C | *** | ||||||
| hg19:Y:7364146-T-C hg38:Y:7496105-T-C | *** | ||||||
| hg19:Y:7663030-C-A hg38:Y:7794989-C-A | *** | ||||||
| hg19:Y:7705803-A-T hg38:Y:7837762-A-T | *** | ||||||
| hg19:Y:7724989-C-A hg38:Y:7856948-C-A | *** | ||||||
| hg19:Y:7734892-G-A hg38:Y:7866851-G-A | *** | ||||||
| hg19:Y:7855861-A-G hg38:Y:7987820-A-G | *** | ||||||
| hg19:Y:7975085-C-A hg38:Y:8107044-C-A | *** | ||||||
| hg19:Y:8131289-T-C hg38:Y:8263248-T-C | *** | ||||||
| hg19:Y:8793496-C-A hg38:Y:8925455-C-A | *** | ||||||
| hg19:Y:10026493-A-T hg38:Y:10188884-A-T | *** | ||||||
| hg38:Y:10831522-A-T | *** | ||||||
| hg38:Y:10831524-T-C | *** | ||||||
| hg19:Y:13489728-TC-T hg38:Y:11334052-TC-T | *** | ||||||
| hg38:Y:11643746-A-AA,G | DYZ17 | *** | |||||
| hg19:Y:13808739-G-C hg38:Y:11688033-G-C | DYZ17 | *** | |||||
| hg19:Y:13870244-G-A hg38:Y:11749538-G-A | *** | ||||||
| hg19:Y:14308529-A-G hg38:Y:12187823-A-G | *** | ||||||
| hg19:Y:14357449-ACCAATAAAACTCTCCTTT-A hg38:Y:12236744-ACCAATAAAACTCTCCTTT-A | *** | ||||||
| hg19:Y:14694062-A-AT hg38:Y:12582128-A-AT | *** | ||||||
| hg19:Y:14694068-A-T hg38:Y:12582134-A-T | *** | ||||||
| hg19:Y:14694069-A-G hg38:Y:12582135-A-G | *** | ||||||
| hg19:Y:14788669-C-A hg38:Y:12676740-C-A | *** | ||||||
| hg19:Y:14817329-C-A hg38:Y:12705400-C-A | *** | ||||||
| hg19:Y:14862805-C-A hg38:Y:12750871-C-A | *** | ||||||
| hg19:Y:14882256-C-T hg38:Y:12770324-C-T | *** | ||||||
| hg19:Y:15175943-C-A hg38:Y:13064029-C-A | *** | ||||||
| hg19:Y:15203143-G-A hg38:Y:13091229-G-A | *** | ||||||
| hg19:Y:15360507-T-C hg38:Y:13248627-T-C | *** | ||||||
| hg19:Y:15687195-C-A hg38:Y:13575315-C-A | *** | ||||||
| hg19:Y:16094060-T-C hg38:Y:13982180-T-C | *** | ||||||
| hg19:Y:16908846-AT-A hg38:Y:14796966-AT-A | *** | ||||||
| hg19:Y:17100630-C-T hg38:Y:14988750-C-T | *** | ||||||
| hg19:Y:17282210-C-A hg38:Y:15170330-C-A | *** | ||||||
| hg19:Y:17289668-C-A hg38:Y:15177788-C-A | *** | ||||||
| hg19:Y:17313829-A-G hg38:Y:15201949-A-G | *** | ||||||
| hg19:Y:17313841-A-G hg38:Y:15201961-A-G | *** | ||||||
| hg19:Y:17908066-C-A hg38:Y:15796186-C-A | *** | ||||||
| hg19:Y:18146689-AAAAC-A hg38:Y:16034809-AAAAC-A | 4×AAAC | *** | |||||
| hg19:Y:18556660-C-A hg38:Y:16444780-C-A | *** | ||||||
| hg19:Y:18744250-C-A hg38:Y:16632370-C-A | *** | ||||||
| hg19:Y:18901719-C-A hg38:Y:16789839-C-A | *** | ||||||
| hg19:Y:18913092-ATTT-A,ATT hg38:Y:16801212-ATTT-A,ATT | 14×T | *** | |||||
| hg19:Y:19505664-C-A hg38:Y:17393784-C-A | *** | ||||||
| hg19:Y:19519885-C-A hg38:Y:17408005-C-A | *** | ||||||
| hg19:Y:21164794-C-A hg38:Y:19002908-C-A | *** | ||||||
| hg19:Y:21694343-C-A hg38:Y:19532457-C-A | *** | ||||||
| hg19:Y:21992325-C-A hg38:Y:19830439-C-A | *** | ||||||
| hg19:Y:22770597-C-A hg38:Y:20608711-C-A | *** | ||||||
| hg19:Y:23045515-T-A hg38:Y:20883629-T-A | *** | ||||||
| hg19:Y:23045516-A-T hg38:Y:20883630-A-T | *** | ||||||
| hg19:Y:23260428-C-CAA hg38:Y:21098542-C-CAA | 11×A | *** | |||||
| hg19:Y:23329714-C-T hg38:Y:21167828-C-T | *** | ||||||
| hg19:Y:23395444-C-A hg38:Y:21233558-C-A | *** | ||||||
| hg19:Y:23433046-T-C hg38:Y:21271160-T-C | *** | ||||||
| hg19:Y:23533274-C-A hg38:Y:21371388-C-A | *** | ||||||
| hg19:Y:23798923-T-C hg38:Y:21637037-T-C | *** | ||||||
| hg19:Y:23825573-C-A hg38:Y:21663687-C-A | *** | ||||||
| hg19:Y:24399940-G-T hg38:Y:22253793-G-T | *** | ||||||
| hg19:Y:28679379-G-A hg38:Y:26533232-G-A | *** | ||||||
| hg19:Y:28787449-A-G hg38:Y:26641302-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 201125 | 8674115 | 7125951 | 7098798 |
| Used in age calculations | 8674115 | 7125951 | 7098798 |
| Counts of SNPs | 5 | 3 |
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