unknown
BigY2: B53791Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B53791 |
|---|---|---|---|---|---|---|---|
| hg38:Y:10689583-A-C | FGC79228 | A+ | |||||
| hg38:Y:10689588-C-G | A+ | ||||||
| hg38:Y:10689620-T-TGC | A+ | ||||||
| hg38:Y:10689627-T-G | A+ | ||||||
| hg38:Y:10689637-C-G | A+ | ||||||
| hg19:Y:22455538-T-A hg38:Y:20293652-T-A | DYZ19 | A* | |||||
| hg19:Y:22456341-A-T hg38:Y:20294455-A-T | DYZ19 | A* | |||||
| hg19:Y:2818621-G-A hg38:Y:2950580-G-A | CTS6919 | A91 | Y | Y | + | ||
| hg19:Y:8578981-C-T hg38:Y:8710940-C-T | BY57007 | F17255 | Y | Y | + | ||
| hg19:Y:22473949-G-A hg38:Y:20312063-G-A | ZS1156 | DYZ19 | + | ||||
| hg19:Y:22485640-G-T hg38:Y:20323754-G-T | BY200516 | DYZ19 | + | ||||
| hg19:Y:7525866-C-A hg38:Y:7657825-C-A | BY198770 | Y | Y | + | |||
| hg19:Y:8202514-A-T hg38:Y:8334473-A-T | BY198601 | Y | Y | + | |||
| hg19:Y:8272014-A-G hg38:Y:8403973-A-G | BY198210 | Y | Y | + | |||
| hg19:Y:8858649-C-T hg38:Y:8990608-C-T | BY199273 | Y | Y | + | |||
| hg38:Y:10968473-C-T | BY209833 | + | |||||
| hg19:Y:13602380-AGAAGGAAG-A hg38:Y:11446704-AGAAGGAAG-A | 9×GAAG | + | |||||
| hg19:Y:14202934-G-A hg38:Y:12082228-G-A | BY199915 | Y | Y | + | |||
| hg19:Y:14819479-T-G hg38:Y:12707546-T-G | BY201369 | Y | Y | + | |||
| hg19:Y:15585451-C-G hg38:Y:13473571-C-G | BY199050 | Y | Y | + | |||
| hg19:Y:15608556-T-C hg38:Y:13496676-T-C | BY201063 | Y | Y | + | |||
| hg19:Y:16631014-G-T hg38:Y:14519134-G-T | BY200636 | Y | Y | + | |||
| hg19:Y:16923997-G-C hg38:Y:14812117-G-C | BY200438 | Y | Y | + | |||
| hg19:Y:18072645-GA-G hg38:Y:15960765-GA-G | + | ||||||
| hg19:Y:18106109-G-A hg38:Y:15994229-G-A | BY200113 | Y | Y | + | |||
| hg19:Y:18666334-G-C hg38:Y:16554454-G-C | BY200455 | Y | Y | + | |||
| hg19:Y:18827203-T-C hg38:Y:16715323-T-C | BY201172 | Y | Y | + | |||
| hg19:Y:18827205-CCCTG-C hg38:Y:16715325-CCCTG-C | + | ||||||
| hg19:Y:19457330-G-A hg38:Y:17345450-G-A | BY200177 | Y | Y | + | |||
| hg19:Y:22256248-T-C hg38:Y:20094362-T-C | BY214360 | DYZ19 | + | ||||
| hg19:Y:22462406-T-C hg38:Y:20300520-T-C | BY220886 | DYZ19 | + | ||||
| hg19:Y:22470082-C-T hg38:Y:20308196-C-T | BY222346 | DYZ19 | + | ||||
| hg19:Y:23815608-T-C hg38:Y:21653722-T-C | BY201292 | Y | + | ||||
| hg19:Y:22231107-C-A hg38:Y:20069221-C-A | F5626 | DYZ19 | * | ||||
| hg19:Y:22225059-G-A hg38:Y:20063173-G-A | DYZ19 | * | |||||
| hg19:Y:22225707-C-A hg38:Y:20063821-C-A | DYZ19 | * | |||||
| hg19:Y:9836888-G-GTT hg38:Y:9999279-G-GTT | 20×T | ** | |||||
| hg19:Y:24751243-A-AT hg38:Y:22605096-A-AT | P3_b2 | 11×T | ** | ||||
| hg19:Y:18718202-TAA-T hg38:Y:16606322-TAA-T | 12×A | ** | |||||
| hg19:Y:13461020-T-G hg38:Y:11305344-T-G | ** | ||||||
| hg19:Y:16913442-A-G hg38:Y:14801562-A-G | BY23202 | ** | |||||
| hg19:Y:7216559-A-G hg38:Y:7348518-A-G | FT333762 | ** | |||||
| hg19:Y:17300728-G-A hg38:Y:15188848-G-A | ZS949 | ** | |||||
| hg19:Y:28499522-C-A hg38:Y:26353375-C-A | ** | ||||||
| hg19:Y:22893304-CCTTTCTTTCTTT-C hg38:Y:20731418-CCTTTCTTTCTTT-C | 17×CTTT | ** | |||||
| hg19:Y:28514780-C-A hg38:Y:26368633-C-A | ** | ||||||
| hg19:Y:15450403-GAAA-G hg38:Y:13338523-GAAA-G | 14×A | ** | |||||
| hg19:Y:13725866-T-A hg38:Y:11570190-T-A | DYZ17 | ** | |||||
| hg19:Y:58985912-G-A hg38:Y:56839765-G-A | ** | ||||||
| hg38:Y:10956716-T-C | ** | ||||||
| hg38:Y:11665919-C-A | DYZ17 | ** | |||||
| hg19:Y:18454947-CTT-C hg38:Y:16343067-CTT-C | P6_Dst | ** | |||||
| hg19:Y:13309860-C-A hg38:Y:11154184-C-A | ** | ||||||
| hg19:Y:13898747-TC-T hg38:Y:11778041-TC-T | ** | ||||||
| hg19:Y:16988946-C-A hg38:Y:14877066-C-A | ** | ||||||
| hg19:Y:19411707-C-A hg38:Y:17299827-C-A | ** | ||||||
| hg38:Y:11025123-C-A | ** | ||||||
| hg38:Y:10934952-C-A | ** | ||||||
| hg38:Y:10775056-C-A | ** | ||||||
| hg19:Y:22199360-C-A hg38:Y:20037474-C-A | ** | ||||||
| hg19:Y:5869982-C-A hg38:Y:6001941-C-A | 11×T | ** | |||||
| hg19:Y:21551423-G-T hg38:Y:19389537-G-T | ** | ||||||
| hg19:Y:2885778-C-A hg38:Y:3017737-C-A | ** | ||||||
| hg38:Y:10969215-T-C | FT183151 | ** | |||||
| hg38:Y:10763360-C-A | ** | ||||||
| hg19:Y:27889277-A-T hg38:Y:25743130-A-T | P1_Y2 | ** | |||||
| hg19:Y:17300737-G-A hg38:Y:15188857-G-A | ** | ||||||
| hg19:Y:18965882-C-A hg38:Y:16854002-C-A | ** | ||||||
| hg19:Y:8973150-C-A hg38:Y:9135541-C-A | ** | ||||||
| hg19:Y:15657201-C-A hg38:Y:13545321-C-A | ** | ||||||
| hg38:Y:10846821-G-A | ** | ||||||
| hg38:Y:10846845-C-A | ** | ||||||
| hg38:Y:10969232-A-C | ** | ||||||
| hg19:Y:21505533-C-A hg38:Y:19343647-C-A | FGC73496 | ** | |||||
| hg19:Y:5895162-C-A hg38:Y:6027121-C-A | ** | ||||||
| hg19:Y:7196476-T-C hg38:Y:7328435-T-C | ** | ||||||
| hg19:Y:17332635-T-C hg38:Y:15220755-T-C | ** | ||||||
| hg38:Y:10961536-T-G | ** | ||||||
| hg19:Y:14846835-C-T hg38:Y:12734901-C-T | ** | ||||||
| hg19:Y:27963576-G-T hg38:Y:25817429-G-T | P1_Y2 | ** | |||||
| hg38:Y:10651608-C-A | ** | ||||||
| hg19:Y:18839040-C-A hg38:Y:16727160-C-A | ** | ||||||
| hg19:Y:22077357-T-TAA hg38:Y:19915471-T-TAA | 14×A | ** | |||||
| hg19:Y:15909428-T-C hg38:Y:13797548-T-C | ** | ||||||
| hg38:Y:10678740-G-T | ** | ||||||
| hg19:Y:9077118-G-T hg38:Y:9239509-G-T | ** | ||||||
| hg19:Y:7196470-T-C hg38:Y:7328429-T-C | ** | ||||||
| hg38:Y:11653963-C-A | DYZ17 | ** | |||||
| hg19:Y:7196471-G-A hg38:Y:7328430-G-A | ** | ||||||
| hg38:Y:10778290-TC-T | ** | ||||||
| hg19:Y:22703620-AAAAAAG-A hg38:Y:20541734-AAAAAAG-A | ** | ||||||
| hg19:Y:23779733-A-G hg38:Y:21617847-A-G | ** | ||||||
| hg19:Y:17666529-C-A hg38:Y:15554649-C-A | ** | ||||||
| hg19:Y:17465820-C-A hg38:Y:15353940-C-A | ** | ||||||
| hg19:Y:6770859-T-C hg38:Y:6902818-T-C | ** | ||||||
| hg19:Y:17770391-C-A hg38:Y:15658511-C-A | ** | ||||||
| hg19:Y:13488203-G-C hg38:Y:11332527-G-C | ** | ||||||
| hg19:Y:13488204-G-A hg38:Y:11332528-G-A | ** | ||||||
| hg38:Y:10768637-C-G | ** | ||||||
| hg19:Y:9980479-C-A hg38:Y:10142870-C-A | ** | ||||||
| hg38:Y:10860741-C-A | ** | ||||||
| hg19:Y:20725951-G-T hg38:Y:18564065-G-T | P4_Prx | ** | |||||
| hg19:Y:19129247-C-A hg38:Y:17017367-C-A | ** | ||||||
| hg19:Y:7422163-C-A hg38:Y:7554122-C-A | ** | ||||||
| hg38:Y:10911359-C-A | ** | ||||||
| hg19:Y:9013083-C-T hg38:Y:9175474-C-T | ** | ||||||
| hg19:Y:21556867-A-G hg38:Y:19394981-A-G | ** | ||||||
| hg38:Y:10664116-T-C | ** | ||||||
| hg19:Y:13195972-C-A hg38:Y:11040296-C-A | ** | ||||||
| hg38:Y:10767755-C-A | ** | ||||||
| hg19:Y:16988981-C-A hg38:Y:14877101-C-A | ** | ||||||
| hg19:Y:15971658-C-A hg38:Y:13859778-C-A | ** | ||||||
| hg19:Y:23779736-A-C hg38:Y:21617850-A-C | ** | ||||||
| hg19:Y:27943971-C-CAA hg38:Y:25797824-C-CAA | P1_Y2 | ** | |||||
| hg19:Y:21115801-C-A hg38:Y:18953915-C-A | ** | ||||||
| hg19:Y:14200627-G-A hg38:Y:12079921-G-A | FT365334 | ** | |||||
| hg38:Y:56839708-G-T | ** | ||||||
| hg19:Y:6475302-C-A hg38:Y:6607261-C-A | ** | ||||||
| hg19:Y:13489056-C-T hg38:Y:11333380-C-T | ** | ||||||
| hg38:Y:56858183-G-A | ** | ||||||
| hg19:Y:16344560-C-A hg38:Y:14232680-C-A | ** | ||||||
| hg19:Y:16602786-T-C hg38:Y:14490906-T-C | ** | ||||||
| hg38:Y:10841041-C-G | ** | ||||||
| hg19:Y:14546433-C-A hg38:Y:12434634-C-A | ** | ||||||
| hg19:Y:15862990-G-CA hg38:Y:13751110-G-CA | ** | ||||||
| hg19:Y:19252990-G-T hg38:Y:17141110-G-T | ** | ||||||
| hg38:Y:10785557-C-A | ** | ||||||
| hg19:Y:14300720-C-A hg38:Y:12180014-C-A | ** | ||||||
| hg19:Y:14296390-C-A hg38:Y:12175684-C-A | ** | ||||||
| hg38:Y:10750804-C-CACTAA | ** | ||||||
| hg19:Y:22833717-A-C hg38:Y:20671831-A-C | ** | ||||||
| hg19:Y:23459676-C-A hg38:Y:21297790-C-A | ** | ||||||
| hg38:Y:10898375-T-C | ** | ||||||
| hg19:Y:6390897-C-A hg38:Y:6522856-C-A | ** | ||||||
| hg19:Y:22537018-C-A hg38:Y:20375132-C-A | ** | ||||||
| hg38:Y:10939745-C-A | ** | ||||||
| hg38:Y:10939789-T-G | ** | ||||||
| hg38:Y:10939791-C-T | ** | ||||||
| hg38:Y:10900821-C-A | ** | ||||||
| hg19:Y:18670273-T-C hg38:Y:16558393-T-C | ** | ||||||
| hg19:Y:6954837-A-G hg38:Y:7086796-A-G | ** | ||||||
| hg19:Y:6954844-C-T hg38:Y:7086803-C-T | ** | ||||||
| hg19:Y:6892547-CT-C hg38:Y:7024506-CT-C | ** | ||||||
| hg38:Y:11648949-G-C | DYZ17 | ** | |||||
| hg19:Y:9978581-C-A hg38:Y:10140972-C-A | ** | ||||||
| hg38:Y:10669298-C-A | ** | ||||||
| hg19:Y:8479521-C-A hg38:Y:8611480-C-A | ** | ||||||
| hg38:Y:10956769-C-A | ** | ||||||
| hg19:Y:6770864-C-T hg38:Y:6902823-C-T | ** | ||||||
| hg19:Y:15593183-C-A hg38:Y:13481303-C-A | ** | ||||||
| hg38:Y:10889295-T-C | ** | ||||||
| hg19:Y:7564136-C-A hg38:Y:7696095-C-A | ** | ||||||
| hg19:Y:58985901-C-T hg38:Y:56839754-C-T | ** | ||||||
| hg19:Y:7248549-C-A hg38:Y:7380508-C-A | ** | ||||||
| hg19:Y:22056166-C-A hg38:Y:19894280-C-A | ** | ||||||
| hg19:Y:13850086-C-A hg38:Y:11729380-C-A | DYZ17 | ** | |||||
| hg38:Y:10668006-C-A | ** | ||||||
| hg38:Y:56850536-C-A | ** | ||||||
| hg19:Y:19410191-C-A hg38:Y:17298311-C-A | ** | ||||||
| hg19:Y:7782856-G-A hg38:Y:7914815-G-A | ** | ||||||
| hg19:Y:7782868-G-A hg38:Y:7914827-G-A | ** | ||||||
| hg38:Y:56839745-C-T | ** | ||||||
| hg19:Y:6971714-C-A hg38:Y:7103673-C-A | ** | ||||||
| hg19:Y:5393470-C-A hg38:Y:5525429-C-A | ** | ||||||
| hg38:Y:56839753-A-T | ** | ||||||
| hg19:Y:9312796-C-A hg38:Y:9475187-C-A | ** | ||||||
| hg19:Y:14589984-A-G hg38:Y:12478184-A-G | ** | ||||||
| hg38:Y:10673783-C-A | ** | ||||||
| hg19:Y:18174860-C-A hg38:Y:16062980-C-A | ** | ||||||
| hg19:Y:4470702-C-A hg38:Y:4602661-C-A | ** | ||||||
| hg19:Y:22213722-C-A hg38:Y:20051836-C-A | ** | ||||||
| hg19:Y:16602810-A-G hg38:Y:14490930-A-G | ** | ||||||
| hg38:Y:10668001-C-T | ** | ||||||
| hg19:Y:23515109-C-A hg38:Y:21353223-C-A | ** | ||||||
| hg19:Y:19435807-C-A hg38:Y:17323927-C-A | ** | ||||||
| hg19:Y:23954287-C-A hg38:Y:21808140-C-A | ** | ||||||
| hg38:Y:10969012-C-T | ** | ||||||
| hg19:Y:13544868-C-A hg38:Y:11389192-C-A | ** | ||||||
| hg19:Y:17110816-C-A hg38:Y:14998936-C-A | ** | ||||||
| hg19:Y:6644802-T-C hg38:Y:6776761-T-C | ** | ||||||
| hg19:Y:15440817-C-A hg38:Y:13328937-C-A | ** | ||||||
| hg19:Y:24424228-C-A hg38:Y:22278081-C-A | ** | ||||||
| hg38:Y:11001096-C-A | ** | ||||||
| hg19:Y:19482086-C-A hg38:Y:17370206-C-A | ** | ||||||
| hg19:Y:28497413-C-A hg38:Y:26351266-C-A | ** | ||||||
| hg19:Y:2939437-T-C hg38:Y:3071396-T-C | ** | ||||||
| hg19:Y:2986393-C-A hg38:Y:3118352-C-A | ** | ||||||
| hg19:Y:3815280-C-A hg38:Y:3947239-C-A | ** | ||||||
| hg19:Y:4003327-A-C hg38:Y:4135286-A-C | ** | ||||||
| hg19:Y:5022270-C-G hg38:Y:5154229-C-G | ** | ||||||
| hg19:Y:5125822-T-A hg38:Y:5257781-T-A | ** | ||||||
| hg19:Y:5491280-G-A hg38:Y:5623239-G-A | ** | ||||||
| hg19:Y:5741135-C-A hg38:Y:5873094-C-A | ** | ||||||
| hg19:Y:5829705-G-T hg38:Y:5961664-G-T | ** | ||||||
| hg19:Y:5830278-A-G hg38:Y:5962237-A-G | ** | ||||||
| hg19:Y:6012838-C-A hg38:Y:6144797-C-A | ** | ||||||
| hg19:Y:6044863-G-T hg38:Y:6176822-G-T | ** | ||||||
| hg19:Y:6073967-G-T hg38:Y:6205926-G-T | ** | ||||||
| hg19:Y:6120280-T-A hg38:Y:6252239-T-A | ** | ||||||
| hg19:Y:6644771-ATTTT-A hg38:Y:6776730-ATTTT-A | 11×T | ** | |||||
| hg19:Y:6644787-G-A hg38:Y:6776746-G-A | ** | ||||||
| hg19:Y:6644803-G-A hg38:Y:6776762-G-A | ** | ||||||
| hg19:Y:6644808-A-G hg38:Y:6776767-A-G | ** | ||||||
| hg19:Y:6644815-A-C hg38:Y:6776774-A-C | ** | ||||||
| hg19:Y:6770858-G-C hg38:Y:6902817-G-C | ** | ||||||
| hg19:Y:6954839-G-A hg38:Y:7086798-G-A | ** | ||||||
| hg19:Y:7022235-C-A hg38:Y:7154194-C-A | ** | ||||||
| hg19:Y:7043530-C-T hg38:Y:7175489-C-T | ** | ||||||
| hg19:Y:7098750-C-A hg38:Y:7230709-C-A | ** | ||||||
| hg19:Y:7140630-G-A hg38:Y:7272589-G-A | FTB77647 | ** | |||||
| hg19:Y:7172485-C-A hg38:Y:7304444-C-A | ** | ||||||
| hg19:Y:7196459-G-A hg38:Y:7328418-G-A | ** | ||||||
| hg19:Y:7196469-G-T hg38:Y:7328428-G-T | ** | ||||||
| hg19:Y:7216544-C-G hg38:Y:7348503-C-G | ** | ||||||
| hg19:Y:7216545-T-C hg38:Y:7348504-T-C | ** | ||||||
| hg19:Y:7216547-T-C hg38:Y:7348506-T-C | ** | ||||||
| hg19:Y:7216567-C-T hg38:Y:7348526-C-T | ** | ||||||
| hg19:Y:7216568-C-G hg38:Y:7348527-C-G | ** | ||||||
| hg19:Y:7216572-T-C hg38:Y:7348531-T-C | ** | ||||||
| hg19:Y:7216577-C-T hg38:Y:7348536-C-T | ** | ||||||
| hg19:Y:7216587-C-T hg38:Y:7348546-C-T | ** | ||||||
| hg19:Y:7433868-T-G hg38:Y:7565827-T-G | ** | ||||||
| hg19:Y:7664764-A-G hg38:Y:7796723-A-G | ** | ||||||
| hg19:Y:7664794-A-G hg38:Y:7796753-A-G | ** | ||||||
| hg19:Y:7775825-G-T hg38:Y:7907784-G-T | FT153218 | ** | |||||
| hg19:Y:8001999-T-C hg38:Y:8133958-T-C | ** | ||||||
| hg38:Y:9056438-C-A | ** | ||||||
| hg38:Y:9056893-G-T | ** | ||||||
| hg19:Y:9055462-G-T hg38:Y:9217853-G-T | ** | ||||||
| hg19:Y:9511425-G-T hg38:Y:9673816-G-T | ** | ||||||
| hg19:Y:9735751-G-T hg38:Y:9898142-G-T | IR3_Prx | ** | |||||
| hg19:Y:9764311-A-C hg38:Y:9926702-A-C | ** | ||||||
| hg19:Y:9772044-C-G hg38:Y:9934435-C-G | ** | ||||||
| hg19:Y:9978434-G-T hg38:Y:10140825-G-T | ** | ||||||
| hg19:Y:9979083-C-A hg38:Y:10141474-C-A | ** | ||||||
| hg38:Y:10660497-C-A | ** | ||||||
| hg38:Y:10663437-C-A | ** | ||||||
| hg38:Y:10686227-C-T | ** | ||||||
| hg38:Y:10785767-A-T | ** | ||||||
| hg38:Y:10786167-C-A | ** | ||||||
| hg38:Y:10817661-C-A | ** | ||||||
| hg38:Y:10842567-C-A | ** | ||||||
| hg38:Y:10845874-T-C | ** | ||||||
| hg38:Y:10850790-C-T | ** | ||||||
| hg38:Y:10859231-G-T | ** | ||||||
| hg38:Y:10885863-TC-T | ** | ||||||
| hg38:Y:10898323-C-T | ** | ||||||
| hg38:Y:10956722-T-TCCTC | ** | ||||||
| hg38:Y:10969046-C-T | ** | ||||||
| hg38:Y:10969249-T-G | ** | ||||||
| hg38:Y:10971654-C-A | ** | ||||||
| hg38:Y:10976341-T-C | ** | ||||||
| hg38:Y:10979756-A-G | ** | ||||||
| hg38:Y:10986017-T-A | ** | ||||||
| hg38:Y:10997965-A-T | ** | ||||||
| hg38:Y:11004718-G-T | ** | ||||||
| hg38:Y:11007678-C-A | ** | ||||||
| hg38:Y:11031358-C-A | ** | ||||||
| hg19:Y:13417368-C-A hg38:Y:11261692-C-A | ** | ||||||
| hg19:Y:13441439-G-A hg38:Y:11285763-G-A | ** | ||||||
| hg38:Y:11659144-G-A | DYZ17 | ** | |||||
| hg19:Y:14027078-T-C hg38:Y:11906372-T-C | ** | ||||||
| hg19:Y:14071419-T-G hg38:Y:11950713-T-G | ** | ||||||
| hg19:Y:14201920-G-A hg38:Y:12081214-G-A | ** | ||||||
| hg19:Y:14321378-A-G hg38:Y:12200672-A-G | FT153734 | ** | |||||
| hg19:Y:14330841-G-A hg38:Y:12210135-G-A | ** | ||||||
| hg19:Y:14373804-G-T hg38:Y:12253100-G-T | ** | ||||||
| hg19:Y:14373805-G-A hg38:Y:12253101-G-A | ** | ||||||
| hg19:Y:14424020-CT-C hg38:Y:12303295-CT-C | ** | ||||||
| hg19:Y:14513354-A-G hg38:Y:12401559-A-G | ** | ||||||
| hg19:Y:14515611-C-G hg38:Y:12403812-C-G | ** | ||||||
| hg19:Y:14846833-A-AAGGG hg38:Y:12734899-A-AAGGG | ** | ||||||
| hg19:Y:14846837-CT-C hg38:Y:12734903-CT-C | ** | ||||||
| hg19:Y:14938093-C-A hg38:Y:12826168-C-A | ** | ||||||
| hg19:Y:15060759-T-C hg38:Y:12948851-T-C | ** | ||||||
| hg19:Y:15060761-A-G hg38:Y:12948853-A-G | ** | ||||||
| hg19:Y:15060762-A-C hg38:Y:12948854-A-C | ** | ||||||
| hg19:Y:15230952-C-A hg38:Y:13119038-C-A | ** | ||||||
| hg19:Y:15358698-C-A hg38:Y:13246817-C-A | ** | ||||||
| hg19:Y:15556790-C-A hg38:Y:13444910-C-A | ** | ||||||
| hg19:Y:15576536-C-A hg38:Y:13464656-C-A | ** | ||||||
| hg19:Y:15579384-C-A hg38:Y:13467504-C-A | ** | ||||||
| hg19:Y:15579957-G-A hg38:Y:13468077-G-A | FT180395 | ** | |||||
| hg19:Y:15579964-C-G hg38:Y:13468084-C-G | ** | ||||||
| hg19:Y:15654919-G-A hg38:Y:13543039-G-A | ** | ||||||
| hg19:Y:15862962-G-C hg38:Y:13751082-G-C | ** | ||||||
| hg19:Y:15862993-T-C hg38:Y:13751113-T-C | ** | ||||||
| hg19:Y:15909421-G-A hg38:Y:13797541-G-A | ** | ||||||
| hg19:Y:15957025-C-A hg38:Y:13845145-C-A | ** | ||||||
| hg19:Y:16033402-T-C hg38:Y:13921522-T-C | ** | ||||||
| hg19:Y:16180289-C-A hg38:Y:14068409-C-A | ** | ||||||
| hg19:Y:16294932-T-A hg38:Y:14183052-T-A | ** | ||||||
| hg19:Y:16515827-C-T hg38:Y:14403947-C-T | ** | ||||||
| hg19:Y:16602809-T-G hg38:Y:14490929-T-G | ** | ||||||
| hg19:Y:16602815-AG-A hg38:Y:14490935-AG-A | ** | ||||||
| hg19:Y:16602818-C-G hg38:Y:14490938-C-G | ** | ||||||
| hg19:Y:16833951-T-A hg38:Y:14722071-T-A | ** | ||||||
| hg19:Y:17010395-C-A hg38:Y:14898515-C-A | ** | ||||||
| hg19:Y:17020524-C-A hg38:Y:14908644-C-A | ** | ||||||
| hg19:Y:17170339-TCT-G hg38:Y:15058459-TCT-G | ** | ||||||
| hg19:Y:17340791-T-C hg38:Y:15228911-T-C | ** | ||||||
| hg19:Y:17340792-G-A hg38:Y:15228912-G-A | ** | ||||||
| hg19:Y:17622577-G-A hg38:Y:15510697-G-A | ** | ||||||
| hg19:Y:17730289-T-G hg38:Y:15618409-T-G | ** | ||||||
| hg19:Y:17770365-A-T hg38:Y:15658485-A-T | ** | ||||||
| hg19:Y:18072643-A-G hg38:Y:15960763-A-G | FT261485 | ** | |||||
| hg19:Y:18218926-A-G hg38:Y:16107046-A-G | ** | ||||||
| hg19:Y:18382173-C-A hg38:Y:16270293-C-A | P6_Gap | ** | |||||
| hg19:Y:18625618-G-T hg38:Y:16513738-G-T | ** | ||||||
| hg19:Y:18929975-T-C hg38:Y:16818095-T-C | ** | ||||||
| hg19:Y:19044316-C-A hg38:Y:16932436-C-A | ** | ||||||
| hg19:Y:20495258-A-T hg38:Y:18333372-A-T | P5_Dst | ** | |||||
| hg19:Y:20640395-T-C hg38:Y:18478509-T-C | P4_Prx | ** | |||||
| hg19:Y:20725944-TG-T hg38:Y:18564058-TG-T | P4_Prx | ** | |||||
| hg19:Y:20989016-A-T hg38:Y:18827130-A-T | P4_Dst | ** | |||||
| hg19:Y:21245229-A-G hg38:Y:19083343-A-G | ** | ||||||
| hg19:Y:21346202-C-A hg38:Y:19184316-C-A | ** | ||||||
| hg19:Y:21565945-A-G hg38:Y:19404059-A-G | ** | ||||||
| hg19:Y:21923876-C-A hg38:Y:19761990-C-A | ** | ||||||
| hg19:Y:21935057-T-C hg38:Y:19773171-T-C | ** | ||||||
| hg19:Y:22100840-G-T hg38:Y:19938954-G-T | ** | ||||||
| hg19:Y:22200799-C-A hg38:Y:20038913-C-A | ** | ||||||
| hg19:Y:22215384-C-A hg38:Y:20053498-C-A | ** | ||||||
| hg19:Y:22241495-A-G hg38:Y:20079609-A-G | DYZ19 | ** | |||||
| hg19:Y:22605250-A-T hg38:Y:20443364-A-T | ** | ||||||
| hg19:Y:22786920-C-A hg38:Y:20625034-C-A | ** | ||||||
| hg19:Y:22833722-A-G hg38:Y:20671836-A-G | ** | ||||||
| hg19:Y:22833723-T-C hg38:Y:20671837-T-C | ** | ||||||
| hg19:Y:22833726-A-C hg38:Y:20671840-A-C | ** | ||||||
| hg19:Y:22934099-T-G hg38:Y:20772213-T-G | ** | ||||||
| hg19:Y:23048116-C-A hg38:Y:20886230-C-A | ** | ||||||
| hg19:Y:23185856-C-A hg38:Y:21023970-C-A | ** | ||||||
| hg19:Y:23274732-C-A hg38:Y:21112846-C-A | ** | ||||||
| hg19:Y:23360572-C-T hg38:Y:21198686-C-T | ** | ||||||
| hg19:Y:23747205-CTTTTTTTTT-C hg38:Y:21585319-CTTTTTTTTT-C | 29×T | ** | |||||
| hg19:Y:23802389-C-CAAA hg38:Y:21640503-C-CAAA | 15×A | ** | |||||
| hg19:Y:23848452-G-A hg38:Y:21686566-G-A | ** | ||||||
| hg38:Y:21750905-G-T | ** | ||||||
| hg19:Y:23996952-A-G hg38:Y:21850805-A-G | ** | ||||||
| hg19:Y:24475339-A-T hg38:Y:22329192-A-T | ** | ||||||
| hg19:Y:24475349-C-T hg38:Y:22329202-C-T | ** | ||||||
| hg19:Y:24475350-A-G hg38:Y:22329203-A-G | ** | ||||||
| hg19:Y:24875741-C-A hg38:Y:22729594-C-A | g1 | ** | |||||
| hg19:Y:25592784-C-A hg38:Y:23446637-C-A | P1_gr1 | ** | |||||
| hg19:Y:25968690-T-TG hg38:Y:23822543-T-TG | P1_Y1 | ** | |||||
| hg19:Y:26010325-CAT-C hg38:Y:23864178-CAT-C | P1_Y1 | ** | |||||
| hg19:Y:26247598-C-T hg38:Y:24101451-C-T | P1_Y1 | ** | |||||
| hg19:Y:27971759-ACACACAC-A hg38:Y:25825612-ACACACAC-A | P1_Y2 | ** | |||||
| hg19:Y:28481957-C-A hg38:Y:26335810-C-A | ** | ||||||
| hg19:Y:28699967-C-A hg38:Y:26553820-C-A | ** | ||||||
| hg38:Y:56839712-A-T | ** | ||||||
| hg38:Y:56839714-C-G | ** | ||||||
| hg38:Y:56839736-A-T | ** | ||||||
| hg38:Y:56839762-C-G | ** | ||||||
| hg38:Y:56839763-A-G | ** | ||||||
| hg19:Y:13474710-G-T hg38:Y:11319034-G-T | *** | ||||||
| hg19:Y:18382933-C-A hg38:Y:16271053-C-A | P6_Gap | *** | |||||
| hg19:Y:13488681-A-T hg38:Y:11333005-A-T | *** | ||||||
| hg19:Y:19129793-TAA-T hg38:Y:17017913-TAA-T | 13×A | *** | |||||
| hg19:Y:9420199-C-A hg38:Y:9582590-C-A | *** | ||||||
| hg38:Y:10808031-C-A | *** | ||||||
| hg19:Y:3131208-C-A hg38:Y:3263167-C-A | *** | ||||||
| hg38:Y:10801717-C-G | *** | ||||||
| hg19:Y:16484096-ATT-A hg38:Y:14372216-ATT-A | 12×T | *** | |||||
| hg38:Y:56827544-TTCCTTTCCAT-T,TTCCATGCGAG | *** | ||||||
| hg38:Y:10769918-G-A | *** | ||||||
| hg38:Y:10801671-C-CGGTTT | *** | ||||||
| hg19:Y:21883687-C-A hg38:Y:19721801-C-A | *** | ||||||
| hg38:Y:10788682-G-T | *** | ||||||
| hg19:Y:17302239-TAA-T,TA hg38:Y:15190359-TAA-T,TA | 22×A | *** | |||||
| hg19:Y:21596578-C-A hg38:Y:19434692-C-A | *** | ||||||
| hg38:Y:10764537-T-G | *** | ||||||
| hg19:Y:5358635-C-A hg38:Y:5490594-C-A | *** | ||||||
| hg38:Y:10672755-C-A | *** | ||||||
| hg19:Y:17929458-G-T hg38:Y:15817578-G-T | *** | ||||||
| hg19:Y:23870971-A-G hg38:Y:21709085-A-G | *** | ||||||
| hg19:Y:3271644-CT-C,CTT hg38:Y:3403603-CT-C,CTT | 11×T | *** | |||||
| hg38:Y:10772376-C-A | *** | ||||||
| hg38:Y:10754952-C-T | *** | ||||||
| hg19:Y:2901725-C-A hg38:Y:3033684-C-A | *** | ||||||
| hg19:Y:22819331-C-A hg38:Y:20657445-C-A | *** | ||||||
| hg38:Y:11005106-A-G | *** | ||||||
| hg38:Y:10839691-C-A | *** | ||||||
| hg19:Y:17528877-CA-C,CAA hg38:Y:15416997-CA-C,CAA | 12×A | *** | |||||
| hg19:Y:23870973-A-G hg38:Y:21709087-A-G | *** | ||||||
| hg19:Y:21091033-T-C hg38:Y:18929147-T-C | *** | ||||||
| hg19:Y:3286177-C-A hg38:Y:3418136-C-A | *** | ||||||
| hg19:Y:4740519-T-A hg38:Y:4872478-T-A | *** | ||||||
| hg19:Y:5869769-C-A hg38:Y:6001728-C-A | *** | ||||||
| hg19:Y:7081231-T-C hg38:Y:7213190-T-C | *** | ||||||
| hg19:Y:8104793-C-A hg38:Y:8236752-C-A | *** | ||||||
| hg19:Y:8171128-C-A hg38:Y:8303087-C-A | *** | ||||||
| hg38:Y:10676804-T-C | *** | ||||||
| hg38:Y:10828740-C-A,T | *** | ||||||
| hg38:Y:10886335-C-A | *** | ||||||
| hg38:Y:10960744-C-CA | *** | ||||||
| hg38:Y:10994256-A-G | *** | ||||||
| hg38:Y:11037167-C-CGATTGTATTC,T | *** | ||||||
| hg19:Y:15045749-C-A hg38:Y:12933839-C-A | *** | ||||||
| hg19:Y:15557099-G-A hg38:Y:13445219-G-A | *** | ||||||
| hg19:Y:15569631-C-A hg38:Y:13457751-C-A | *** | ||||||
| hg19:Y:15632105-A-G hg38:Y:13520225-A-G | *** | ||||||
| hg19:Y:16254849-T-C hg38:Y:14142969-T-C | *** | ||||||
| hg19:Y:17943695-A-T hg38:Y:15831815-A-T | *** | ||||||
| hg19:Y:18261990-A-G hg38:Y:16150110-A-G | *** | ||||||
| hg19:Y:18404682-GT-G hg38:Y:16292802-GT-G | P6_Gap | *** | |||||
| hg19:Y:18406038-T-C hg38:Y:16294158-T-C | P6_Gap | *** | |||||
| hg19:Y:19253131-G-T hg38:Y:17141251-G-T | FT272087 | *** | |||||
| hg19:Y:19430024-G-A hg38:Y:17318144-G-A | *** | ||||||
| hg19:Y:22034931-C-A hg38:Y:19873045-C-A | *** | ||||||
| hg19:Y:22200637-T-A hg38:Y:20038751-T-A | *** | ||||||
| hg19:Y:23068410-T-C hg38:Y:20906524-T-C | *** | ||||||
| hg38:Y:56836582-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B53791 | 9239695 | 7536004 | 7456027 |
| Used in age calculations | 9239695 | 7536004 | 7456027 |
| Counts of SNPs | 16 | 17 |
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