Berry
BigY2: 168328MDKA Birth:
United States > KentuckyTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 168328 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22363529-C-T hg38:Y:20201643-C-T | DYZ19 | A+ | |||||
| hg19:Y:22234512-C-A hg38:Y:20072626-C-A | DYZ19 | A* | |||||
| hg19:Y:22291393-C-T hg38:Y:20129507-C-T | DYZ19 | A* | |||||
| hg19:Y:28817147-T-A hg38:Y:26671000-T-A | A* | ||||||
| hg19:Y:6281224-A-G hg38:Y:6413183-A-G | IR3_Dst | A* | |||||
| hg19:Y:18287593-A-G hg38:Y:16175713-A-G | P6_Prx | A* | |||||
| hg19:Y:19683439-G-C hg38:Y:17571559-G-C | P5_Prx | A* | |||||
| hg19:Y:19848662-T-C hg38:Y:17736782-T-C | P5_Prx | A* | |||||
| hg19:Y:25992879-T-C hg38:Y:23846732-T-C | P1_Y1 | A* | |||||
| hg19:Y:22461368-G-A hg38:Y:20299482-G-A | BY155291 | DYZ19 | + | ||||
| hg19:Y:19751263-CA-C hg38:Y:17639383-CA-C | P5_Prx | 15×A | + | ||||
| hg19:Y:6959946-G-A hg38:Y:7091905-G-A | BY62530 | Y | Y | + | |||
| hg19:Y:7570234-G-A hg38:Y:7702193-G-A | BY188878 | Y | Y | + | |||
| hg19:Y:7925664-C-T hg38:Y:8057623-C-T | Y | Y | + | ||||
| hg19:Y:13835533-T-A hg38:Y:11714827-T-A | BY189044 | DYZ17 | + | ||||
| hg19:Y:15279456-C-G hg38:Y:13167555-C-G | BY189126 | Y | Y | + | |||
| hg19:Y:15562041-G-A hg38:Y:13450161-G-A | Y | Y | + | ||||
| hg19:Y:15924192-G-A hg38:Y:13812312-G-A | BY189165 | Y | Y | + | |||
| hg19:Y:17327660-A-C hg38:Y:15215780-A-C | BY189229 | Y | Y | + | |||
| hg19:Y:17415167-T-C hg38:Y:15303287-T-C | BY189236 | Y | Y | + | |||
| hg19:Y:18096285-GTA-G hg38:Y:15984405-GTA-G | + | ||||||
| hg19:Y:21075046-G-A hg38:Y:18913160-G-A | BY189381 | Y | Y | + | |||
| hg19:Y:21541754-C-G hg38:Y:19379868-C-G | BY189418 | Y | Y | + | |||
| hg19:Y:21541769-T-A hg38:Y:19379883-T-A | BY189419 | Y | Y | + | |||
| hg19:Y:21609141-CA-C hg38:Y:19447255-CA-C | + | ||||||
| hg19:Y:21614929-T-C hg38:Y:19453043-T-C | BY189424 | Y | Y | + | |||
| hg19:Y:22099501-T-C hg38:Y:19937615-T-C | Y | Y | + | ||||
| hg19:Y:22440624-G-C hg38:Y:20278738-G-C | BY218865 | DYZ19 | + | ||||
| hg19:Y:22470799-C-A hg38:Y:20308913-C-A | BY189474 | DYZ19 | + | ||||
| hg19:Y:22475743-C-A hg38:Y:20313857-C-A | BY223418 | DYZ19 | + | ||||
| hg19:Y:22728847-T-G hg38:Y:20566961-T-G | BY140362 | Y | Y | + | |||
| hg19:Y:23412789-C-A hg38:Y:21250903-C-A | BY189546 | Y | Y | + | |||
| hg19:Y:23587065-A-C hg38:Y:21425179-A-C | BY189559 | Y | Y | + | |||
| hg19:Y:24411497-TAAAG-T hg38:Y:22265350-TAAAG-T | + | ||||||
| hg19:Y:24872524-G-A hg38:Y:22726377-G-A | BY189596 | IR1_R | + | ||||
| hg38:Y2:12764-T-C | + | ||||||
| hg19:Y:5976703-C-A hg38:Y:6108662-C-A | BY28906 | * | |||||
| hg19:Y:22294753-G-T hg38:Y:20132867-G-T | Y24874 | DYZ19 | * | ||||
| hg19:Y:5976703-CTC-C,CTA hg38:Y:6108662-CTC-C,CTA | * | ||||||
| hg19:Y:22241337-G-T hg38:Y:20079451-G-T | DYZ19 | * | |||||
| hg19:Y:13470512-G-T hg38:Y:11314836-G-T | * | ||||||
| hg19:Y:19997550-C-T hg38:Y:17885670-C-T | P5_Prx | * | |||||
| hg19:Y:22317370-C-G hg38:Y:20155484-C-G | DYZ19 | * | |||||
| hg19:Y:13697896-T-A hg38:Y:11542220-T-A | DYZ17 | ** | |||||
| hg19:Y:3374048-C-CATAAA hg38:Y:3506007-C-CATAAA | 10×ATAAA | ** | |||||
| hg19:Y:58982291-G-T hg38:Y:56836144-G-T | ** | ||||||
| hg19:Y:13488615-A-T hg38:Y:11332939-A-T | ** | ||||||
| hg19:Y:7359743-AAT-A hg38:Y:7491702-AAT-A | 11×AT | ** | |||||
| hg19:Y:22236203-C-T hg38:Y:20074317-C-T | DYZ19 | ** | |||||
| hg19:Y:22529530-G-A hg38:Y:20367644-G-A | ** | ||||||
| hg19:Y:58982238-C-A hg38:Y:56836091-C-A | ** | ||||||
| hg19:Y:9030329-AAAAGG-A hg38:Y:9192720-AAAAGG-A | 4×AAAGG | ** | |||||
| hg19:Y:22325183-C-T hg38:Y:20163297-C-T | DYZ19 | ** | |||||
| hg19:Y:18949786-C-A hg38:Y:16837906-C-A | ** | ||||||
| hg19:Y:13457699-T-G hg38:Y:11302023-T-G | ** | ||||||
| hg19:Y:7414277-CAAA-C hg38:Y:7546236-CAAA-C | 27×A | ** | |||||
| hg19:Y:7360599-C-A hg38:Y:7492558-C-A | ** | ||||||
| hg19:Y:25841765-G-T hg38:Y:23695618-G-T | P1_b3 | ** | |||||
| hg19:Y:13705474-A-T hg38:Y:11549798-A-T | DYZ17 | 10×GGAAT | ** | ||||
| hg38:Y:10755394-C-CTGT | ** | ||||||
| hg38:Y:11021030-C-T | ** | ||||||
| hg19:Y:13354858-TAA-T hg38:Y:11199182-TAA-T | 14×A | ** | |||||
| hg19:Y:23034457-AT-A hg38:Y:20872571-AT-A | ** | ||||||
| hg38:Y:10754951-C-CTAATA | ** | ||||||
| hg19:Y:28532079-C-A hg38:Y:26385932-C-A | ** | ||||||
| hg19:Y:13726084-G-T hg38:Y:11570408-G-T | DYZ17 | ** | |||||
| hg19:Y:9631688-G-GGT hg38:Y:9794079-G-GGT | IR3_Prx | ** | |||||
| hg19:Y:16309400-A-G hg38:Y:14197520-A-G | ** | ||||||
| hg19:Y:13462019-G-C hg38:Y:11306343-G-C | ** | ||||||
| hg19:Y:19482188-C-A hg38:Y:17370308-C-A | ** | ||||||
| hg38:Y:56828929-C-CATGCTATTAG | ** | ||||||
| hg19:Y:23034439-C-T hg38:Y:20872553-C-T | ** | ||||||
| hg19:Y:58972965-T-G hg38:Y:56826818-T-G | ** | ||||||
| hg19:Y:7579792-C-A hg38:Y:7711751-C-A | ** | ||||||
| hg19:Y:13461962-C-T hg38:Y:11306286-C-T | ** | ||||||
| hg38:Y:11643735-A-T | DYZ17 | ** | |||||
| hg38:Y:11643737-T-C | DYZ17 | ** | |||||
| hg38:Y:10989872-A-T | ** | ||||||
| hg38:Y:10987763-C-G | ** | ||||||
| hg19:Y:13472233-C-A hg38:Y:11316557-C-A | ** | ||||||
| hg19:Y:5844980-C-A hg38:Y:5976939-C-A | ** | ||||||
| hg19:Y:9310588-G-T hg38:Y:9472979-G-T | ** | ||||||
| hg19:Y:19187608-G-A hg38:Y:17075728-G-A | ** | ||||||
| hg38:Y:10754972-C-G | ** | ||||||
| hg19:Y:13457693-T-A hg38:Y:11302017-T-A | ** | ||||||
| hg38:Y:10840039-CTCCTA-C | ** | ||||||
| hg19:Y:17283830-C-A hg38:Y:15171950-C-A | ** | ||||||
| hg38:Y:10866822-C-A | ** | ||||||
| hg38:Y:10829193-C-A | ** | ||||||
| hg19:Y:27862643-G-T hg38:Y:25716496-G-T | P1_Y2 | ** | |||||
| hg38:Y:10653469-A-C | ** | ||||||
| hg38:Y:10763158-T-A | ** | ||||||
| hg19:Y:14765041-C-A hg38:Y:12653110-C-A | ** | ||||||
| hg38:Y:10795221-C-A | ** | ||||||
| hg38:Y:10992732-C-A | ** | ||||||
| hg38:Y2:35472-C-A | ** | ||||||
| hg19:Y:14701989-C-A hg38:Y:12590055-C-A | ** | ||||||
| hg19:Y:13712268-G-A hg38:Y:11556592-G-A | DYZ17 | ** | |||||
| hg19:Y:15158732-C-A hg38:Y:13046818-C-A | ** | ||||||
| hg19:Y:17023420-C-A hg38:Y:14911540-C-A | FTB82042 | ** | |||||
| hg19:Y:17028802-C-A hg38:Y:14916922-C-A | ** | ||||||
| hg19:Y:13909198-G-A hg38:Y:11788492-G-A | ** | ||||||
| hg19:Y:22950193-CTTTT-C hg38:Y:20788307-CTTTT-C | 21×T | ** | |||||
| hg19:Y:28792969-A-G hg38:Y:26646822-A-G | ** | ||||||
| hg19:Y:26421577-C-A hg38:Y:24275430-C-A | P1_Y1 | ** | |||||
| hg19:Y:15495460-CAAAAA-C hg38:Y:13383580-CAAAAA-C | 16×A | ** | |||||
| hg19:Y:9442199-C-A hg38:Y:9604590-C-A | ** | ||||||
| hg19:Y:7894767-C-A hg38:Y:8026726-C-A | ** | ||||||
| hg38:Y:10776507-C-T | ** | ||||||
| hg19:Y:18443417-G-T hg38:Y:16331537-G-T | P6_Dst | ** | |||||
| hg19:Y:19187548-C-T hg38:Y:17075668-C-T | ** | ||||||
| hg19:Y:13453383-CGGGTTGATTC-G hg38:Y:11297707-CGGGTTGATTC-G | ** | ||||||
| hg19:Y:13453400-T-C hg38:Y:11297724-T-C | ** | ||||||
| hg19:Y:13453413-C-T hg38:Y:11297737-C-T | ** | ||||||
| hg19:Y:9937660-C-A hg38:Y:10100051-C-A | ** | ||||||
| hg19:Y:5874309-C-A hg38:Y:6006268-C-A | ** | ||||||
| hg38:Y:10983011-G-T | FT439134 | ** | |||||
| hg38:Y:11643715-A-T | DYZ17 | ** | |||||
| hg19:Y:13472220-C-A hg38:Y:11316544-C-A | ** | ||||||
| hg19:Y:22023224-G-T hg38:Y:19861338-G-T | ** | ||||||
| hg38:Y:10657316-A-T | ** | ||||||
| hg19:Y:4936882-C-A hg38:Y:5068841-C-A | ** | ||||||
| hg19:Y:3271657-C-A hg38:Y:3403616-C-A | ** | ||||||
| hg19:Y:7258582-C-A hg38:Y:7390541-C-A | ** | ||||||
| hg38:Y:56830297-C-T | ** | ||||||
| hg19:Y:8295567-C-A hg38:Y:8427526-C-A | ** | ||||||
| hg38:Y:10892508-C-G | ** | ||||||
| hg19:Y:23059593-A-ATT hg38:Y:20897707-A-ATT | 12×T | ** | |||||
| hg19:Y:27864384-T-TCTC hg38:Y:25718237-T-TCTC | P1_Y2 | ** | |||||
| hg38:Y:10840051-C-A | ** | ||||||
| hg19:Y:7310514-T-C hg38:Y:7442473-T-C | ** | ||||||
| hg38:Y:11020121-C-T | ** | ||||||
| hg19:Y:13226613-C-A hg38:Y:11070937-C-A | ** | ||||||
| hg19:Y:17492077-T-C hg38:Y:15380197-T-C | ** | ||||||
| hg19:Y:17492079-A-G hg38:Y:15380199-A-G | ** | ||||||
| hg19:Y:9996591-C-A hg38:Y:10158982-C-A | ** | ||||||
| hg19:Y:17633226-C-A hg38:Y:15521346-C-A | ** | ||||||
| hg19:Y:13865561-T-A hg38:Y:11744855-T-A | DYZ17 | ** | |||||
| hg19:Y:16431229-CAAAAA-C hg38:Y:14319349-CAAAAA-C | 15×A | ** | |||||
| hg19:Y:7053920-C-A hg38:Y:7185879-C-A | ** | ||||||
| hg19:Y:7255440-A-C hg38:Y:7387399-A-C | ** | ||||||
| hg19:Y:16462427-C-A hg38:Y:14350547-C-A | ** | ||||||
| hg38:Y:56836096-C-T | ** | ||||||
| hg19:Y:5785350-C-A hg38:Y:5917309-C-A | ** | ||||||
| hg38:Y:10647944-T-G | ** | ||||||
| hg38:Y:10931642-G-T | ** | ||||||
| hg19:Y:28698736-C-A hg38:Y:26552589-C-A | ** | ||||||
| hg19:Y:19053273-C-A hg38:Y:16941393-C-A | ** | ||||||
| hg38:Y:56836048-G-T | ** | ||||||
| hg38:Y:56836050-TGA-T | ** | ||||||
| hg19:Y:15107518-G-A hg38:Y:12995605-G-A | ** | ||||||
| hg19:Y:18707197-C-A hg38:Y:16595317-C-A | ** | ||||||
| hg38:Y:10840063-A-T | ** | ||||||
| hg38:Y:10999900-A-G | ** | ||||||
| hg19:Y:13462053-C-T hg38:Y:11306377-C-T | ** | ||||||
| hg38:Y:10861223-T-C | ** | ||||||
| hg19:Y:24384908-G-T hg38:Y:22238761-G-T | ** | ||||||
| hg19:Y:10011119-G-T hg38:Y:10173510-G-T | ** | ||||||
| hg19:Y:5910476-C-A hg38:Y:6042435-C-A | ** | ||||||
| hg38:Y:10756143-T-A | ** | ||||||
| hg19:Y:18190574-C-A hg38:Y:16078694-C-A | ** | ||||||
| hg19:Y:27822225-G-T hg38:Y:25676078-G-T | P1_Y2 | ** | |||||
| hg19:Y:21558720-TC-T hg38:Y:19396834-TC-T | ** | ||||||
| hg19:Y:2708716-C-T hg38:Y:2840675-C-T | ** | ||||||
| hg19:Y:13472205-G-T hg38:Y:11316529-G-T | ** | ||||||
| hg19:Y:3850122-T-G hg38:Y:3982081-T-G | ** | ||||||
| hg19:Y:28804013-A-G hg38:Y:26657866-A-G | ** | ||||||
| hg19:Y:14765036-T-G hg38:Y:12653105-T-G | ** | ||||||
| hg38:Y:10927307-C-A | ** | ||||||
| hg19:Y:16045485-C-A hg38:Y:13933605-C-A | ** | ||||||
| hg19:Y:22619432-C-A hg38:Y:20457546-C-A | ** | ||||||
| hg19:Y:21549183-GTTTT-G hg38:Y:19387297-GTTTT-G | 17×T | ** | |||||
| hg19:Y:23426977-CA-C hg38:Y:21265091-CA-C | ** | ||||||
| hg19:Y:18192506-C-A hg38:Y:16080626-C-A | ** | ||||||
| hg19:Y:7183949-C-A hg38:Y:7315908-C-A | ** | ||||||
| hg19:Y:4995631-C-A hg38:Y:5127590-C-A | ** | ||||||
| hg19:Y:58976851-C-A hg38:Y:56830704-C-A | ** | ||||||
| hg19:Y:6806808-C-A hg38:Y:6938767-C-A | ** | ||||||
| hg19:Y:28804417-T-A hg38:Y:26658270-T-A | ** | ||||||
| hg19:Y:19187612-G-A hg38:Y:17075732-G-A | ** | ||||||
| hg19:Y:15361254-C-A hg38:Y:13249374-C-A | ** | ||||||
| hg19:Y:19056362-G-A hg38:Y:16944482-G-A | ** | ||||||
| hg19:Y:13222121-G-T hg38:Y:11066445-G-T | ** | ||||||
| hg19:Y:14029343-C-A hg38:Y:11908637-C-A | ** | ||||||
| hg19:Y:28812490-A-G hg38:Y:26666343-A-G | ** | ||||||
| hg19:Y:15168826-C-A hg38:Y:13056912-C-A | ** | ||||||
| hg19:Y:28803973-C-G hg38:Y:26657826-C-G | ** | ||||||
| hg19:Y:3991966-ACACTCT-A hg38:Y:4123925-ACACTCT-A | ** | ||||||
| hg19:Y:22510553-T-G hg38:Y:20348667-T-G | DYZ19 | ** | |||||
| hg19:Y:5242905-C-A hg38:Y:5374864-C-A | ** | ||||||
| hg19:Y:16309388-C-T hg38:Y:14197508-C-T | ** | ||||||
| hg19:Y:21170319-GTTT-G hg38:Y:19008433-GTTT-G | 14×T | ** | |||||
| hg38:Y:11673164-C-A | FT399451 | DYZ17 | ** | ||||
| hg19:Y:28544956-T-C hg38:Y:26398809-T-C | ** | ||||||
| hg19:Y:2812832-C-A hg38:Y:2944791-C-A | ** | ||||||
| hg19:Y:14993938-C-A hg38:Y:12882023-C-A | ** | ||||||
| hg38:Y:56870021-C-A | ** | ||||||
| hg19:Y:13453448-C-T hg38:Y:11297772-C-T | ** | ||||||
| hg19:Y:5911525-C-A hg38:Y:6043484-C-A | ** | ||||||
| hg19:Y:4070851-C-A hg38:Y:4202810-C-A | ** | ||||||
| hg19:Y:22658509-C-A hg38:Y:20496623-C-A | ** | ||||||
| hg19:Y:13726094-A-T hg38:Y:11570418-A-T | DYZ17 | ** | |||||
| hg19:Y:19770058-C-A hg38:Y:17658178-C-A | P5_Prx | ** | |||||
| hg19:Y:21691828-C-A hg38:Y:19529942-C-A | ** | ||||||
| hg19:Y:21133371-C-A hg38:Y:18971485-C-A | ** | ||||||
| hg19:Y:19187639-T-C hg38:Y:17075759-T-C | ** | ||||||
| hg19:Y:18218887-C-A hg38:Y:16107007-C-A | ** | ||||||
| hg19:Y:5059675-CCCA-C hg38:Y:5191634-CCCA-C | ** | ||||||
| hg38:Y:10849954-C-A | ** | ||||||
| hg19:Y:18247268-C-A hg38:Y:16135388-C-A | ** | ||||||
| hg19:Y:20266136-G-GT hg38:Y:18104250-G-GT | P5_Dst | ** | |||||
| hg19:Y:7311976-C-A hg38:Y:7443935-C-A | ** | ||||||
| hg19:Y:13698498-C-A hg38:Y:11542822-C-A | DYZ17 | ** | |||||
| hg19:Y:3389385-C-A hg38:Y:3521344-C-A | ** | ||||||
| hg38:Y:9125632-G-T | ** | ||||||
| hg19:Y:14218705-C-A hg38:Y:12097999-C-A | ** | ||||||
| hg19:Y:13899073-T-C hg38:Y:11778367-T-C | ** | ||||||
| hg19:Y:13838348-G-C hg38:Y:11717642-G-C | DYZ17 | ** | |||||
| hg19:Y:16292752-A-G hg38:Y:14180872-A-G | ** | ||||||
| hg19:Y:13462025-C-T hg38:Y:11306349-C-T | ** | ||||||
| hg19:Y:13462028-G-A hg38:Y:11306352-G-A | ** | ||||||
| hg19:Y:9440374-C-A hg38:Y:9602765-C-A | ** | ||||||
| hg19:Y:15541712-A-C hg38:Y:13429832-A-C | ** | ||||||
| hg38:Y:11643756-A-ACGAAT | DYZ17 | ** | |||||
| hg19:Y:21961575-C-A hg38:Y:19799689-C-A | ** | ||||||
| hg38:Y:10826878-C-G | ** | ||||||
| hg38:Y:10763145-C-A | ** | ||||||
| hg19:Y:22041545-C-A hg38:Y:19879659-C-A | ** | ||||||
| hg19:Y:21836215-C-A hg38:Y:19674329-C-A | ** | ||||||
| hg38:Y:10763043-T-G | ** | ||||||
| hg38:Y:10785833-T-A | ** | ||||||
| hg19:Y:7131968-C-A hg38:Y:7263927-C-A | ** | ||||||
| hg19:Y:13454692-T-A hg38:Y:11299016-T-A | ** | ||||||
| hg38:Y:10759786-A-G | ** | ||||||
| hg19:Y:3229645-C-A hg38:Y:3361604-C-A | ** | ||||||
| hg38:Y:11033693-C-T | ** | ||||||
| hg19:Y:5910519-C-A hg38:Y:6042478-C-A | ** | ||||||
| hg19:Y:13472248-C-G hg38:Y:11316572-C-G | ** | ||||||
| hg19:Y:13817478-C-A hg38:Y:11696772-C-A | DYZ17 | ** | |||||
| hg38:Y:10689019-A-T | ** | ||||||
| hg19:Y:13461960-G-A hg38:Y:11306284-G-A | ** | ||||||
| hg38:Y:10763164-T-A | ** | ||||||
| hg38:Y:10689031-T-TGCAATCCACG | ** | ||||||
| hg38:Y:56837549-T-A | ** | ||||||
| hg38:Y:10657336-A-T | ** | ||||||
| hg19:Y:28818469-A-T hg38:Y:26672322-A-T | ** | ||||||
| hg19:Y:16292767-G-A hg38:Y:14180887-G-A | ** | ||||||
| hg19:Y:13865558-T-A hg38:Y:11744852-T-A | DYZ17 | ** | |||||
| hg19:Y:22092925-C-A hg38:Y:19931039-C-A | ** | ||||||
| hg19:Y:22880889-C-A hg38:Y:20719003-C-A | ** | ||||||
| hg19:Y:17492108-G-C hg38:Y:15380228-G-C | ** | ||||||
| hg19:Y:17492127-C-G hg38:Y:15380247-C-G | ** | ||||||
| hg19:Y:17492129-G-T hg38:Y:15380249-G-T | ** | ||||||
| hg19:Y:18121805-C-A hg38:Y:16009925-C-A | ** | ||||||
| hg19:Y:2708714-C-T hg38:Y:2840673-C-T | FTB75297 | ** | |||||
| hg19:Y:3015699-C-A hg38:Y:3147658-C-A | ** | ||||||
| hg19:Y:3436461-C-A hg38:Y:3568420-C-A | ** | ||||||
| hg19:Y:3754484-T-C hg38:Y:3886443-T-C | ** | ||||||
| hg19:Y:3990780-C-A hg38:Y:4122739-C-A | ** | ||||||
| hg19:Y:4195537-C-CT hg38:Y:4327496-C-CT | 10×T | ** | |||||
| hg19:Y:4672390-G-A hg38:Y:4804349-G-A | ** | ||||||
| hg19:Y:4871677-C-A hg38:Y:5003636-C-A | ** | ||||||
| hg19:Y:5125615-C-A hg38:Y:5257574-C-A | ** | ||||||
| hg19:Y:5910802-C-A hg38:Y:6042761-C-A | ** | ||||||
| hg19:Y:6133638-C-A hg38:Y:6265597-C-A | ** | ||||||
| hg19:Y:6226060-T-TTTCTTTCC hg38:Y:6358019-T-TTTCTTTCC | IR3_Dst | ** | |||||
| hg19:Y:6605768-C-A hg38:Y:6737727-C-A | ** | ||||||
| hg19:Y:6734379-C-A hg38:Y:6866338-C-A | ** | ||||||
| hg19:Y:6779556-T-C hg38:Y:6911515-T-C | ** | ||||||
| hg19:Y:6891986-T-A hg38:Y:7023945-T-A | ** | ||||||
| hg19:Y:6925894-C-A hg38:Y:7057853-C-A | ** | ||||||
| hg19:Y:6957118-C-A hg38:Y:7089077-C-A | ** | ||||||
| hg19:Y:7058229-G-A hg38:Y:7190188-G-A | ** | ||||||
| hg19:Y:7128114-C-A hg38:Y:7260073-C-A | ** | ||||||
| hg19:Y:7160678-A-G hg38:Y:7292637-A-G | ** | ||||||
| hg19:Y:7281931-C-A hg38:Y:7413890-C-A | ** | ||||||
| hg19:Y:7334791-C-A hg38:Y:7466750-C-A | ** | ||||||
| hg19:Y:7424410-G-A hg38:Y:7556369-G-A | ** | ||||||
| hg19:Y:7499302-T-C hg38:Y:7631261-T-C | IR1_L | ** | |||||
| hg19:Y:7645355-G-A hg38:Y:7777314-G-A | ** | ||||||
| hg19:Y:7709490-A-G hg38:Y:7841449-A-G | ** | ||||||
| hg19:Y:8979746-T-C hg38:Y:9142137-T-C | ** | ||||||
| hg19:Y:9026096-C-T hg38:Y:9188487-C-T | ** | ||||||
| hg19:Y:9434439-A-G hg38:Y:9596830-A-G | ** | ||||||
| hg19:Y:9636650-A-T hg38:Y:9799041-A-T | IR3_Prx | ** | |||||
| hg19:Y:9765824-G-T hg38:Y:9928215-G-T | ** | ||||||
| hg19:Y:9928205-C-T hg38:Y:10090596-C-T | FT361739 | ** | |||||
| hg19:Y:9996211-A-C hg38:Y:10158602-A-C | ** | ||||||
| hg19:Y:10024753-G-A hg38:Y:10187144-G-A | BY83116 | ** | |||||
| hg38:Y:10653471-A-G | ** | ||||||
| hg38:Y:10653478-A-T | ** | ||||||
| hg38:Y:10756149-TCTCCC-T | ** | ||||||
| hg38:Y:10760990-T-G | ** | ||||||
| hg38:Y:10778514-C-A | ** | ||||||
| hg38:Y:10804788-T-TCGACC | ** | ||||||
| hg38:Y:10804807-TTC-T | ** | ||||||
| hg38:Y:10826867-T-C | ** | ||||||
| hg38:Y:10840004-TTCCAC-T | ** | ||||||
| hg38:Y:10889230-T-C | ** | ||||||
| hg38:Y:10943814-C-A | ** | ||||||
| hg38:Y:10946832-C-A | ** | ||||||
| hg38:Y:10983018-CTCGAG-C | ** | ||||||
| hg38:Y:11021537-T-G | ** | ||||||
| hg38:Y:11033696-C-A | ** | ||||||
| hg38:Y:11033721-A-T | ** | ||||||
| hg38:Y:11033721-AACTACACTCC-A | ** | ||||||
| hg38:Y:11033925-C-T | ** | ||||||
| hg19:Y:13242797-C-A hg38:Y:11087121-C-A | ** | ||||||
| hg19:Y:13455532-T-C hg38:Y:11299856-T-C | ** | ||||||
| hg19:Y:13469672-C-A hg38:Y:11313996-C-A | ** | ||||||
| hg19:Y:13472215-A-T hg38:Y:11316539-A-T | ** | ||||||
| hg19:Y:13472225-C-T hg38:Y:11316549-C-T | ** | ||||||
| hg19:Y:13697863-G-A hg38:Y:11542187-G-A | DYZ17 | ** | |||||
| hg19:Y:13710248-C-A hg38:Y:11554572-C-A | DYZ17 | ** | |||||
| hg19:Y:13817551-C-A hg38:Y:11696845-C-A | DYZ17 | ** | |||||
| hg19:Y:13836757-C-A hg38:Y:11716051-C-A | DYZ17 | ** | |||||
| hg19:Y:13862666-A-G hg38:Y:11741960-A-G | DYZ17 | ** | |||||
| hg19:Y:13909197-C-T hg38:Y:11788491-C-T | FT377525 | ** | |||||
| hg19:Y:13936107-A-G hg38:Y:11815401-A-G | ** | ||||||
| hg19:Y:14109484-A-G hg38:Y:11988778-A-G | ** | ||||||
| hg19:Y:14421842-CT-C hg38:Y:12301117-CT-C | ** | ||||||
| hg19:Y:14443142-G-T hg38:Y:12322415-G-T | ** | ||||||
| hg19:Y:14446657-C-A hg38:Y:12325930-C-A | ** | ||||||
| hg19:Y:14451176-C-A hg38:Y:12330449-C-A | ** | ||||||
| hg19:Y:14607982-C-A hg38:Y:12496184-C-A | ** | ||||||
| hg19:Y:14608253-C-A hg38:Y:12496455-C-A | ** | ||||||
| hg19:Y:14634376-G-T hg38:Y:12522445-G-T | ** | ||||||
| hg19:Y:14680559-G-T hg38:Y:12568625-G-T | ** | ||||||
| hg19:Y:14753844-A-G hg38:Y:12641913-A-G | ** | ||||||
| hg19:Y:14765020-T-A hg38:Y:12653089-T-A | ** | ||||||
| hg19:Y:14765026-T-TC hg38:Y:12653095-T-TC | ** | ||||||
| hg19:Y:14765030-G-C hg38:Y:12653099-G-C | ** | ||||||
| hg19:Y:14765033-TC-T hg38:Y:12653102-TC-T | ** | ||||||
| hg19:Y:14765055-G-C hg38:Y:12653124-G-C | ** | ||||||
| hg19:Y:14951483-T-A hg38:Y:12839557-T-A | ** | ||||||
| hg19:Y:15200043-A-T hg38:Y:13088129-A-T | ** | ||||||
| hg19:Y:15239002-C-A hg38:Y:13127088-C-A | ** | ||||||
| hg19:Y:15686764-G-A hg38:Y:13574884-G-A | ** | ||||||
| hg19:Y:15744738-G-T hg38:Y:13632858-G-T | ** | ||||||
| hg19:Y:15894498-T-C hg38:Y:13782618-T-C | ** | ||||||
| hg19:Y:15995599-C-T hg38:Y:13883719-C-T | ** | ||||||
| hg19:Y:16344548-C-T hg38:Y:14232668-C-T | ** | ||||||
| hg19:Y:16427818-G-A hg38:Y:14315938-G-A | ** | ||||||
| hg19:Y:16474712-C-A hg38:Y:14362832-C-A | ** | ||||||
| hg19:Y:16700773-T-A hg38:Y:14588893-T-A | ** | ||||||
| hg19:Y:16704090-G-T hg38:Y:14592210-G-T | ** | ||||||
| hg19:Y:16705406-C-A hg38:Y:14593526-C-A | ** | ||||||
| hg19:Y:17118395-C-A hg38:Y:15006515-C-A | 16×T | ** | |||||
| hg19:Y:17222863-C-A hg38:Y:15110983-C-A | ** | ||||||
| hg19:Y:17300777-G-A hg38:Y:15188897-G-A | FT5671 | ** | |||||
| hg19:Y:17492099-G-A hg38:Y:15380219-G-A | ** | ||||||
| hg19:Y:17492109-G-A hg38:Y:15380229-G-A | ** | ||||||
| hg19:Y:17492136-G-T hg38:Y:15380256-G-T | ** | ||||||
| hg19:Y:17851015-C-A hg38:Y:15739135-C-A | ** | ||||||
| hg19:Y:18222014-A-T hg38:Y:16110134-A-T | 12×T | ** | |||||
| hg19:Y:18639642-C-A hg38:Y:16527762-C-A | ** | ||||||
| hg19:Y:18825737-C-A hg38:Y:16713857-C-A | ** | ||||||
| hg19:Y:18926750-C-G hg38:Y:16814870-C-G | ** | ||||||
| hg19:Y:19187587-CG-C hg38:Y:17075707-CG-C | ** | ||||||
| hg19:Y:19187616-C-G hg38:Y:17075736-C-G | ** | ||||||
| hg19:Y:19468689-T-C hg38:Y:17356809-T-C | ** | ||||||
| hg19:Y:19532351-A-T hg38:Y:17420471-A-T | ** | ||||||
| hg19:Y:19542196-T-G hg38:Y:17430316-T-G | ** | ||||||
| hg19:Y:19751306-C-A hg38:Y:17639426-C-A | P5_Prx | ** | |||||
| hg19:Y:20132217-G-A hg38:Y:18020337-G-A | P5_Dst | ** | |||||
| hg19:Y:20363562-G-T hg38:Y:18201676-G-T | P5_Dst | ** | |||||
| hg19:Y:20762270-G-T hg38:Y:18600384-G-T | P4_Prx | ** | |||||
| hg19:Y:20762312-G-T hg38:Y:18600426-G-T | P4_Prx | ** | |||||
| hg19:Y:21072150-C-A hg38:Y:18910264-C-A | ** | ||||||
| hg19:Y:21340345-T-C hg38:Y:19178459-T-C | ** | ||||||
| hg19:Y:21547379-T-A hg38:Y:19385493-T-A | ** | ||||||
| hg19:Y:21809817-TA-T hg38:Y:19647931-TA-T | ** | ||||||
| hg19:Y:21853711-A-AC hg38:Y:19691825-A-AC | ** | ||||||
| hg19:Y:22200775-ATGCCT-A hg38:Y:20038889-ATGCCT-A | ** | ||||||
| hg19:Y:22337563-T-C hg38:Y:20175677-T-C | DYZ19 | ** | |||||
| hg19:Y:22366411-T-C hg38:Y:20204525-T-C | DYZ19 | ** | |||||
| hg19:Y:22490288-G-T hg38:Y:20328402-G-T | DYZ19 | ** | |||||
| hg19:Y:22529536-G-A hg38:Y:20367650-G-A | ** | ||||||
| hg19:Y:22950084-G-A hg38:Y:20788198-G-A | ** | ||||||
| hg19:Y:23034435-C-A hg38:Y:20872549-C-A | ** | ||||||
| hg19:Y:23062185-G-T hg38:Y:20900299-G-T | ** | ||||||
| hg19:Y:23256347-T-C hg38:Y:21094461-T-C | ** | ||||||
| hg19:Y:23285288-A-C hg38:Y:21123402-A-C | ** | ||||||
| hg19:Y:23306325-C-A hg38:Y:21144439-C-A | ** | ||||||
| hg19:Y:23373199-C-T hg38:Y:21211313-C-T | ** | ||||||
| hg19:Y:23386401-G-T hg38:Y:21224515-G-T | ** | ||||||
| hg19:Y:23391782-C-A hg38:Y:21229896-C-A | ** | ||||||
| hg19:Y:24404945-T-C hg38:Y:22258798-T-C | ** | ||||||
| hg19:Y:24491668-C-T hg38:Y:22345521-C-T | ** | ||||||
| hg19:Y:26421581-C-A hg38:Y:24275434-C-A | P1_Y1 | ** | |||||
| hg19:Y:27607779-G-T hg38:Y:25461632-G-T | P1_Y2 | ** | |||||
| hg19:Y:28479715-T-C hg38:Y:26333568-T-C | ** | ||||||
| hg19:Y:28514667-G-A hg38:Y:26368520-G-A | ** | ||||||
| hg19:Y:28589354-C-T hg38:Y:26443207-C-T | ** | ||||||
| hg19:Y:28605430-A-T hg38:Y:26459283-A-T | ** | ||||||
| hg19:Y:28812433-C-A hg38:Y:26666286-C-A | ** | ||||||
| hg19:Y:28812492-G-A hg38:Y:26666345-G-A | ** | ||||||
| hg38:Y:56750088-A-C | ** | ||||||
| hg38:Y:56827041-T-C | ** | ||||||
| hg38:Y:56834678-G-A | ** | ||||||
| hg38:Y:56834682-C-A | ** | ||||||
| hg38:Y:56837535-G-C | ** | ||||||
| hg38:Y:56837541-G-A | ** | ||||||
| hg38:Y:56837545-C-T | ** | ||||||
| hg38:Y:56837581-C-A | ** | ||||||
| hg38:Y:56858078-G-A | ** | ||||||
| hg38:Y2:24237-G-T | ** | ||||||
| hg19:Y:18096891-AT-A hg38:Y:15985011-AT-A | 11×T | *** | |||||
| hg19:Y:9131166-C-A hg38:Y:9293557-C-A | *** | ||||||
| hg19:Y:15242398-CT-C hg38:Y:13130484-CT-C | 10×T | *** | |||||
| hg19:Y:7762187-CAA-C hg38:Y:7894146-CAA-C | 13×A | *** | |||||
| hg19:Y:7636010-TAAA-T hg38:Y:7767969-TAAA-T | 15×A | *** | |||||
| hg38:Y:56834577-C-A | *** | ||||||
| hg38:Y:10987865-A-C | *** | ||||||
| hg19:Y:19345128-TAAA-T hg38:Y:17233248-TAAA-T | 18×A | *** | |||||
| hg19:Y:17580765-ATTT-A hg38:Y:15468885-ATTT-A | 16×T | *** | |||||
| hg19:Y:13450411-CTCCATTCCATTCCATTCTATTCCATTCCAT-C,CTCCATTCCATTCCATTCCAT hg38:Y:11294735-CTCCATTCCATTCCATTCTATTCCATTCCAT-C,CTCCATTCCATTCCATTCCAT | *** | ||||||
| hg19:Y:10023885-ATC-A hg38:Y:10186276-ATC-A | *** | ||||||
| hg38:Y:11017845-C-A | *** | ||||||
| hg19:Y:21472157-C-A hg38:Y:19310271-C-A | *** | ||||||
| hg19:Y:15140636-C-A hg38:Y:13028723-C-A | *** | ||||||
| hg38:Y:10931624-T-C | *** | ||||||
| hg19:Y:23034497-A-G hg38:Y:20872611-A-G | *** | ||||||
| hg19:Y:19564177-C-A hg38:Y:17452297-C-A | *** | ||||||
| hg19:Y:13645236-T-C hg38:Y:11489560-T-C | FGC31400 | *** | |||||
| hg19:Y:13976277-C-A hg38:Y:11855571-C-A | *** | ||||||
| hg19:Y:13479016-G-A hg38:Y:11323340-G-A | *** | ||||||
| hg19:Y:4113208-C-T hg38:Y:4245167-C-T | *** | ||||||
| hg19:Y:7142135-C-A hg38:Y:7274094-C-A | *** | ||||||
| hg19:Y:7184271-C-A hg38:Y:7316230-C-A | *** | ||||||
| hg19:Y:9765642-G-T hg38:Y:9928033-G-T | *** | ||||||
| hg19:Y:14986627-T-C hg38:Y:12874695-T-C | *** | ||||||
| hg19:Y:17028652-C-A hg38:Y:14916772-C-A | *** | ||||||
| hg19:Y:17596764-C-A hg38:Y:15484884-C-A | *** | ||||||
| hg19:Y:18974341-A-G hg38:Y:16862461-A-G | *** | ||||||
| hg19:Y:19009605-C-A hg38:Y:16897725-C-A | *** | ||||||
| hg19:Y:21468745-ATTTT-A,ATT hg38:Y:19306859-ATTTT-A,ATT | 25×T | *** | |||||
| hg19:Y:21836106-C-A hg38:Y:19674220-C-A | *** | ||||||
| hg19:Y:22320241-C-T hg38:Y:20158355-C-T | DYZ19 | *** | |||||
| hg19:Y:23034504-A-C hg38:Y:20872618-A-C | *** | ||||||
| hg19:Y:23609679-C-A hg38:Y:21447793-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 168328 | 9306418 | 7678928 | 7636937 |
| Used in age calculations | 9306418 | 7678928 | 7636937 |
| Counts of SNPs | 16 | 16 |
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