Jackson
BigY3: 447189, BigY2: 447189Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 447189 | BigY2 447189 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:24609956-C-A hg38:Y:22463809-C-A | P3_t2 | A+ | ||||||
| hg19:Y:21750034-C-CA hg38:Y:19588148-C-CA | 10×A | A* | ||||||
| hg38:Y:56833850-C-CATTCCACTCT | A* | |||||||
| hg19:Y:20932630-C-A hg38:Y:18770744-C-A | P4_Dst | A* | ||||||
| hg19:Y:13449256-G-T hg38:Y:11293580-G-T | A* | |||||||
| hg19:Y:13479195-C-T hg38:Y:11323519-C-T | A* | |||||||
| hg19:Y:13489674-A-G hg38:Y:11333998-A-G | A* | |||||||
| hg19:Y:4311427-C-T hg38:Y:4443386-C-T | A* | |||||||
| hg19:Y:20371471-G-T hg38:Y:18209585-G-T | P5_Dst | A* | ||||||
| hg19:Y:20620905-CA-C hg38:Y:18459019-CA-C | P4_Prx | 14×A | + | |||||
| hg19:Y:6627564-T-G hg38:Y:6759523-T-G | BY183907 | Y | Y | + | + | |||
| hg19:Y:13469955-C-T hg38:Y:11314279-C-T | * | |||||||
| hg19:Y:4555031-G-T hg38:Y:4686990-G-T | * | |||||||
| hg19:Y:18872082-T-C hg38:Y:16760202-T-C | BY24934 | 5×CTTC | ** | |||||
| hg19:Y:5221058-C-T hg38:Y:5353017-C-T | ** | |||||||
| hg19:Y:5204425-T-C hg38:Y:5336384-T-C | ** | |||||||
| hg19:Y:13720698-C-G hg38:Y:11565022-C-G | DYZ17 | ** | ||||||
| hg19:Y:15388519-G-A hg38:Y:13276639-G-A | M5919 | ** | ||||||
| hg19:Y:22587830-T-C hg38:Y:20425944-T-C | FT298989 | ** | ||||||
| hg19:Y:20579335-G-A hg38:Y:18417449-G-A | P5_Dst | ** | ||||||
| hg19:Y:9639091-G-T hg38:Y:9801482-G-T | IR3_Prx | ** | ||||||
| hg19:Y:17946919-GTTT-G hg38:Y:15835039-GTTT-G | 24×T | ** | ||||||
| hg38:Y:11022085-C-A | ** | |||||||
| hg38:Y:11022093-C-CTAAAT | ** | |||||||
| hg38:Y:11022110-T-A | ** | |||||||
| hg38:Y:11022117-ATTC-A | ** | |||||||
| hg38:Y:11022137-A-C | ** | |||||||
| hg38:Y:10797722-C-A | ** | |||||||
| hg38:Y:10797726-C-A | FT383807 | ** | ||||||
| hg38:Y:10978732-A-C | ** | |||||||
| hg38:Y:10999867-T-A | ** | |||||||
| hg19:Y:13922603-C-A hg38:Y:11801897-C-A | ** | |||||||
| hg19:Y:7371764-C-A hg38:Y:7503723-C-A | ** | |||||||
| hg38:Y:10962973-C-A | ** | |||||||
| hg19:Y:13489429-G-A hg38:Y:11333753-G-A | ** | |||||||
| hg19:Y:6759306-C-A hg38:Y:6891265-C-A | ** | |||||||
| hg38:Y:10958843-T-C | ** | |||||||
| hg38:Y:10942479-A-C | ** | |||||||
| hg19:Y:13558162-C-T hg38:Y:11402486-C-T | ** | |||||||
| hg38:Y:10803249-G-T | ** | |||||||
| hg19:Y:7783252-C-A hg38:Y:7915211-C-A | ** | |||||||
| hg38:Y:10926621-C-G | ** | |||||||
| hg38:Y:10671801-CGGCCT-G | ** | |||||||
| hg19:Y:15928702-CAAAA-C hg38:Y:13816822-CAAAA-C | 19×A | ** | ||||||
| hg38:Y:10942913-T-A | ** | |||||||
| hg38:Y:10759742-T-C | ** | |||||||
| hg38:Y:11011676-C-G | ** | |||||||
| hg19:Y:18891047-A-AT hg38:Y:16779167-A-AT | 9×T | ** | ||||||
| hg19:Y:13705499-T-TCGGAC hg38:Y:11549823-T-TCGGAC | DYZ17 | ** | ||||||
| hg38:Y:10980227-C-T | ** | |||||||
| hg19:Y:3769442-CTT-C hg38:Y:3901401-CTT-C | 13×T | ** | ||||||
| hg38:Y:10797738-A-T | ** | |||||||
| hg19:Y:13271775-T-TAA hg38:Y:11116099-T-TAA | 12×A | ** | ||||||
| hg38:Y:10949310-T-C | ** | |||||||
| hg19:Y:8987564-C-A hg38:Y:9149955-C-A | ** | |||||||
| hg38:Y:10980776-C-A | ** | |||||||
| hg38:Y2:16531-A-C | ** | |||||||
| hg38:Y:10899051-A-T | ** | |||||||
| hg38:Y:10899078-C-A | ** | |||||||
| hg19:Y:6368685-G-T hg38:Y:6500644-G-T | ** | |||||||
| hg38:Y:10749033-G-T | ** | |||||||
| hg38:Y:10759788-T-G | ** | |||||||
| hg19:Y:13489422-G-T hg38:Y:11333746-G-T | ** | |||||||
| hg19:Y:23002859-A-G hg38:Y:20840973-A-G | BY26607 | ** | ||||||
| hg19:Y:23002861-A-G hg38:Y:20840975-A-G | BY26608 | ** | ||||||
| hg38:Y:10992590-A-T | ** | |||||||
| hg19:Y:9191074-C-A hg38:Y:9353465-C-A | ** | |||||||
| hg38:Y:10987325-G-T | ** | |||||||
| hg19:Y:16352037-A-G hg38:Y:14240157-A-G | ** | |||||||
| hg38:Y:11030096-G-A | ** | |||||||
| hg19:Y:23373158-C-A hg38:Y:21211272-C-A | ** | |||||||
| hg38:Y:10691404-C-A | ** | |||||||
| hg19:Y:4563187-G-T hg38:Y:4695146-G-T | ** | |||||||
| hg38:Y:10748706-T-C | ** | |||||||
| hg19:Y:19379601-C-A hg38:Y:17267721-C-A | ** | |||||||
| hg38:Y:10671797-C-T | ** | |||||||
| hg38:Y:10978736-G-C | ** | |||||||
| hg38:Y:10950918-C-T | ** | |||||||
| hg38:Y:10868559-C-A | ** | |||||||
| hg38:Y:10930773-C-T | ** | |||||||
| hg19:Y:7535887-CA-C hg38:Y:7667846-CA-C | ** | |||||||
| hg38:Y:11023002-C-A | ** | |||||||
| hg38:Y:10748698-G-T | ** | |||||||
| hg38:Y:10748713-GTTCTTTTCCA-G | ** | |||||||
| hg19:Y:16848633-C-A hg38:Y:14736753-C-A | ** | |||||||
| hg19:Y:7148327-C-A hg38:Y:7280286-C-A | ** | |||||||
| hg19:Y:28500024-C-A hg38:Y:26353877-C-A | ** | |||||||
| hg38:Y:10653308-C-A | ** | |||||||
| hg38:Y:10930764-C-T | FT275562 | ** | ||||||
| hg19:Y:14297915-C-CCA hg38:Y:12177209-C-CCA | 10×CA | ** | ||||||
| hg19:Y:14529013-C-A hg38:Y:12417214-C-A | ** | |||||||
| hg19:Y:7670884-C-A hg38:Y:7802843-C-A | ** | |||||||
| hg38:Y:10688064-C-A | ** | |||||||
| hg19:Y:28724824-C-A hg38:Y:26578677-C-A | ** | |||||||
| hg19:Y:3116240-G-A hg38:Y:3248199-G-A | ** | |||||||
| hg19:Y:13225913-C-A hg38:Y:11070237-C-A | ** | |||||||
| hg19:Y:3988007-C-A hg38:Y:4119966-C-A | ** | |||||||
| hg19:Y:14051796-C-A hg38:Y:11931090-C-A | ** | |||||||
| hg38:Y:10981223-C-A | ** | |||||||
| hg19:Y:17737505-C-A hg38:Y:15625625-C-A | ** | |||||||
| hg38:Y:10971970-T-TCAACTC | ** | |||||||
| hg38:Y:56728113-T-C | ** | |||||||
| hg19:Y:28700958-C-A hg38:Y:26554811-C-A | ** | |||||||
| hg19:Y:6983844-G-A hg38:Y:7115803-G-A | ** | |||||||
| hg19:Y:19231319-C-CTT hg38:Y:17119439-C-CTT | 24×T | ** | ||||||
| hg19:Y:13311009-C-A hg38:Y:11155333-C-A | ** | |||||||
| hg19:Y:14029138-C-A hg38:Y:11908432-C-A | ** | |||||||
| hg38:Y:10961402-A-G | ** | |||||||
| hg19:Y:15881924-C-T hg38:Y:13770044-C-T | ** | |||||||
| hg19:Y:24013847-CTATATATATATATATATATATATATATATA-C hg38:Y:21867700-CTATATATATATATATATATATATATATATA-C | 21×TA | ** | ||||||
| hg19:Y:21241755-C-A hg38:Y:19079869-C-A | ** | |||||||
| hg38:Y:10688062-T-C | ** | |||||||
| hg38:Y:10785239-A-G | ** | |||||||
| hg38:Y:10894715-T-C | ** | |||||||
| hg19:Y:28782318-C-A hg38:Y:26636171-C-A | ** | |||||||
| hg19:Y:18989674-C-A hg38:Y:16877794-C-A | ** | |||||||
| hg38:Y:10689812-T-G | ** | |||||||
| hg19:Y:15636040-C-A hg38:Y:13524160-C-A | ** | |||||||
| hg19:Y:13881327-C-A hg38:Y:11760621-C-A | ** | |||||||
| hg19:Y:17313456-C-A hg38:Y:15201576-C-A | ** | |||||||
| hg19:Y:14421863-C-A hg38:Y:12301138-C-A | ** | |||||||
| hg38:Y:10980771-T-C | ** | |||||||
| hg38:Y:10851005-C-T | ** | |||||||
| hg38:Y:10930716-A-C | ** | |||||||
| hg38:Y:10958863-C-T | ** | |||||||
| hg38:Y:10988138-C-A | ** | |||||||
| hg19:Y:24276376-CCA-C hg38:Y:22130229-CCA-C | P3_b1 | ** | ||||||
| hg19:Y:9962339-C-A hg38:Y:10124730-C-A | ** | |||||||
| hg19:Y:23807424-C-CA hg38:Y:21645538-C-CA | ** | |||||||
| hg19:Y:7391758-C-A hg38:Y:7523717-C-A | ** | |||||||
| hg38:Y2:29719-A-G | ** | |||||||
| hg19:Y:13597032-C-A hg38:Y:11441356-C-A | ** | |||||||
| hg19:Y:16008075-G-T hg38:Y:13896195-G-T | ** | |||||||
| hg38:Y:10658593-C-T | ** | |||||||
| hg38:Y:10803246-A-C | ** | |||||||
| hg38:Y:10803270-T-C | ** | |||||||
| hg19:Y:7288064-G-A hg38:Y:7420023-G-A | ** | |||||||
| hg19:Y:19563174-C-A hg38:Y:17451294-C-A | ** | |||||||
| hg38:Y:10748697-C-T | ** | |||||||
| hg38:Y:10930708-C-T | ** | |||||||
| hg19:Y:18972233-C-A hg38:Y:16860353-C-A | ** | |||||||
| hg19:Y:18738096-CTT-C hg38:Y:16626216-CTT-C | 11×T | ** | ||||||
| hg19:Y:15742467-C-A hg38:Y:13630587-C-A | ** | |||||||
| hg19:Y:28542431-AAAG-A hg38:Y:26396284-AAAG-A | ** | |||||||
| hg19:Y:14216418-C-A hg38:Y:12095712-C-A | ** | |||||||
| hg19:Y:24402000-C-A hg38:Y:22255853-C-A | ** | |||||||
| hg38:Y:10930808-T-C | ** | |||||||
| hg38:Y:10785238-C-A | ** | |||||||
| hg38:Y:10671798-A-G | ** | |||||||
| hg19:Y:22797822-G-T hg38:Y:20635936-G-T | ** | |||||||
| hg19:Y:4069940-C-A hg38:Y:4201899-C-A | ** | |||||||
| hg19:Y:15882004-C-T hg38:Y:13770124-C-T | ** | |||||||
| hg19:Y:3966977-G-T hg38:Y:4098936-G-T | ** | |||||||
| hg38:Y:10762951-C-A | ** | |||||||
| hg38:Y:10803211-T-C | ** | |||||||
| hg38:Y:10689125-C-A | ** | |||||||
| hg38:Y:10868513-A-T | ** | |||||||
| hg38:Y:10961398-C-A | ** | |||||||
| hg38:Y:10942452-G-C | ** | |||||||
| hg19:Y:5708517-C-A hg38:Y:5840476-C-A | ** | |||||||
| hg38:Y:9123429-T-C | ** | |||||||
| hg38:Y:9057233-TA-T | ** | |||||||
| hg19:Y:2747834-C-A hg38:Y:2879793-C-A | ** | |||||||
| hg38:Y:10998664-C-A | ** | |||||||
| hg19:Y:26190680-G-T hg38:Y:24044533-G-T | P1_Y1 | ** | ||||||
| hg19:Y:5242530-C-A hg38:Y:5374489-C-A | ** | |||||||
| hg19:Y:18703186-C-A hg38:Y:16591306-C-A | ** | |||||||
| hg38:Y:10894635-C-A | ** | |||||||
| hg19:Y:8279907-C-A hg38:Y:8411866-C-A | ** | |||||||
| hg38:Y:10964357-C-A | ** | |||||||
| hg38:Y:10884989-C-A | ** | |||||||
| hg19:Y:17685720-C-T hg38:Y:15573840-C-T | ** | |||||||
| hg38:Y:10868528-A-C | ** | |||||||
| hg38:Y:11011643-A-T | ** | |||||||
| hg38:Y:11011649-A-G | ** | |||||||
| hg19:Y:6403690-G-A hg38:Y:6535649-G-A | FT426304 | ** | ||||||
| hg38:Y:10688046-A-C | ** | |||||||
| hg38:Y:10993198-C-A | ** | |||||||
| hg38:Y:10788401-C-A | ** | |||||||
| hg38:Y:10689084-A-T | ** | |||||||
| hg19:Y:23817935-G-T hg38:Y:21656049-G-T | ** | |||||||
| hg38:Y:56850670-G-T | ** | |||||||
| hg19:Y:14712231-C-A hg38:Y:12600298-C-A | ** | |||||||
| hg38:Y:10803288-C-T | ** | |||||||
| hg19:Y:4871960-C-A hg38:Y:5003919-C-A | ** | |||||||
| hg19:Y:2772791-C-A hg38:Y:2904750-C-A | ** | |||||||
| hg19:Y:23398241-G-A hg38:Y:21236355-G-A | ** | |||||||
| hg19:Y:15881940-C-A hg38:Y:13770060-C-A | ** | |||||||
| hg38:Y:10748669-T-C | ** | |||||||
| hg38:Y:10973909-A-G | ** | |||||||
| hg38:Y:10803240-A-C | ** | |||||||
| hg38:Y:10803241-A-C | ** | |||||||
| hg19:Y:21476894-C-A hg38:Y:19315008-C-A | ** | |||||||
| hg38:Y:10748674-C-T | ** | |||||||
| hg19:Y:13326304-C-A hg38:Y:11170628-C-A | ** | |||||||
| hg19:Y:15881960-C-G hg38:Y:13770080-C-G | ** | |||||||
| hg38:Y:10930758-C-T | ** | |||||||
| hg38:Y:10975797-A-ACTCCT | ** | |||||||
| hg38:Y:10975809-T-A | ** | |||||||
| hg19:Y:14742203-G-T hg38:Y:12630271-G-T | ** | |||||||
| hg38:Y:10803235-C-G | ** | |||||||
| hg19:Y:3219026-C-A hg38:Y:3350985-C-A | ** | |||||||
| hg19:Y:3436412-T-C hg38:Y:3568371-T-C | ** | |||||||
| hg19:Y:3836934-C-A hg38:Y:3968893-C-A | ** | |||||||
| hg19:Y:3851784-C-T hg38:Y:3983743-C-T | ** | |||||||
| hg19:Y:4002304-TA-T hg38:Y:4134263-TA-T | ** | |||||||
| hg19:Y:4532000-C-A hg38:Y:4663959-C-A | ** | |||||||
| hg19:Y:4553838-C-A hg38:Y:4685797-C-A | ** | |||||||
| hg19:Y:4604401-G-A hg38:Y:4736360-G-A | ** | |||||||
| hg19:Y:4901664-C-A hg38:Y:5033623-C-A | ** | |||||||
| hg19:Y:5059632-C-A hg38:Y:5191591-C-A | ** | |||||||
| hg19:Y:5204386-A-G hg38:Y:5336345-A-G | ** | |||||||
| hg19:Y:5204393-C-G hg38:Y:5336352-C-G | ** | |||||||
| hg19:Y:5204394-C-T hg38:Y:5336353-C-T | ** | |||||||
| hg19:Y:5204396-C-G hg38:Y:5336355-C-G | ** | |||||||
| hg19:Y:5204412-A-T hg38:Y:5336371-A-T | ** | |||||||
| hg19:Y:5204415-G-C hg38:Y:5336374-G-C | ** | |||||||
| hg19:Y:5878915-C-A hg38:Y:6010874-C-A | ** | |||||||
| hg19:Y:6519505-G-C hg38:Y:6651464-G-C | ** | |||||||
| hg19:Y:6971731-C-CAA hg38:Y:7103690-C-CAA | ** | |||||||
| hg19:Y:7239271-C-A hg38:Y:7371230-C-A | ** | |||||||
| hg19:Y:7535870-C-A hg38:Y:7667829-C-A | ** | |||||||
| hg19:Y:7535885-T-C hg38:Y:7667844-T-C | ** | |||||||
| hg19:Y:7633201-A-C hg38:Y:7765160-A-C | ** | |||||||
| hg19:Y:7862032-C-A hg38:Y:7993991-C-A | ** | |||||||
| hg19:Y:8016938-CTTTTTTTTTT-C hg38:Y:8148897-CTTTTTTTTTT-C | 25×T | ** | ||||||
| hg19:Y:8044632-C-A hg38:Y:8176591-C-A | ** | |||||||
| hg19:Y:8912948-G-T hg38:Y:9044907-G-T | ** | |||||||
| hg19:Y:9025342-C-A hg38:Y:9187733-C-A | ** | |||||||
| hg19:Y:9342199-C-G hg38:Y:9504590-C-G | ** | |||||||
| hg19:Y:9934052-G-A hg38:Y:10096443-G-A | FTA5783 | ** | ||||||
| hg38:Y:10689087-C-CCTTTT | ** | |||||||
| hg38:Y:10748673-A-C | ** | |||||||
| hg38:Y:10761562-A-C | ** | |||||||
| hg38:Y:10769481-A-C | ** | |||||||
| hg38:Y:10780431-T-C | ** | |||||||
| hg38:Y:10803285-T-TC | ** | |||||||
| hg38:Y:10819497-G-A | ** | |||||||
| hg38:Y:10829135-C-T | ** | |||||||
| hg38:Y:10868499-C-T | ** | |||||||
| hg38:Y:10868526-T-C | ** | |||||||
| hg38:Y:10868543-A-T | ** | |||||||
| hg38:Y:10920395-G-A | ** | |||||||
| hg38:Y:10925540-ATT-A | ** | |||||||
| hg38:Y:10925544-CAAT-C | ** | |||||||
| hg38:Y:10930740-T-G | ** | |||||||
| hg38:Y:10930762-A-T | ** | |||||||
| hg38:Y:10930777-A-C | ** | |||||||
| hg38:Y:10930788-TTGCAC-T | ** | |||||||
| hg38:Y:10930806-C-T | ** | |||||||
| hg38:Y:10940513-T-C | FT437455 | ** | ||||||
| hg38:Y:10942423-C-A | ** | |||||||
| hg38:Y:10942424-A-T | ** | |||||||
| hg38:Y:10942450-C-CTCACTT | ** | |||||||
| hg38:Y:10942458-A-T | ** | |||||||
| hg38:Y:10942482-C-A | ** | |||||||
| hg38:Y:10942486-C-T | ** | |||||||
| hg38:Y:10942512-C-A | ** | |||||||
| hg38:Y:10942513-A-T | ** | |||||||
| hg38:Y:10947838-T-G | ** | |||||||
| hg38:Y:10958821-C-G | ** | |||||||
| hg38:Y:10975762-A-T | ** | |||||||
| hg38:Y:10981799-G-T | ** | |||||||
| hg38:Y:10992563-A-G | ** | |||||||
| hg38:Y:10995511-T-C | ** | |||||||
| hg38:Y:11011663-A-T | ** | |||||||
| hg19:Y:13231623-G-A hg38:Y:11075947-G-A | ** | |||||||
| hg19:Y:13326341-C-A hg38:Y:11170665-C-A | ** | |||||||
| hg19:Y:13372349-C-A hg38:Y:11216673-C-A | ** | |||||||
| hg19:Y:13473739-A-C hg38:Y:11318063-A-C | ** | |||||||
| hg19:Y:13486609-C-A hg38:Y:11330933-C-A | ** | |||||||
| hg19:Y:13587828-C-A hg38:Y:11432152-C-A | ** | |||||||
| hg19:Y:13690209-A-G hg38:Y:11534533-A-G | DYZ17 | ** | ||||||
| hg19:Y:13715658-C-T hg38:Y:11559982-C-T | DYZ17 | ** | ||||||
| hg19:Y:13720669-G-A hg38:Y:11564993-G-A | DYZ17 | ** | ||||||
| hg38:Y:11653202-G-T | DYZ17 | ** | ||||||
| hg38:Y:11653231-G-C | DYZ17 | ** | ||||||
| hg38:Y:11653232-G-C | DYZ17 | ** | ||||||
| hg38:Y:11653267-G-T | DYZ17 | ** | ||||||
| hg38:Y:11675020-C-T | FGC80056 | DYZ17 | ** | |||||
| hg38:Y:11675022-G-T | DYZ17 | ** | ||||||
| hg38:Y:11675023-A-G | DYZ17 | ** | ||||||
| hg19:Y:13927480-A-G hg38:Y:11806774-A-G | ** | |||||||
| hg19:Y:13935088-C-A hg38:Y:11814382-C-A | ** | |||||||
| hg19:Y:13935800-C-A hg38:Y:11815094-C-A | ** | |||||||
| hg19:Y:14100976-A-C hg38:Y:11980270-A-C | ** | |||||||
| hg19:Y:14357743-G-T hg38:Y:12237038-G-T | ** | |||||||
| hg19:Y:14371372-C-A hg38:Y:12250668-C-A | ** | |||||||
| hg19:Y:14431383-T-C hg38:Y:12310656-T-C | ** | |||||||
| hg19:Y:14526925-T-C hg38:Y:12415126-T-C | ** | |||||||
| hg19:Y:14575957-C-A hg38:Y:12464157-C-A | ** | |||||||
| hg19:Y:14605630-C-T hg38:Y:12493832-C-T | ** | |||||||
| hg19:Y:14741664-C-A hg38:Y:12629732-C-A | ** | |||||||
| hg19:Y:15109209-G-T hg38:Y:12997296-G-T | ** | |||||||
| hg19:Y:15157370-T-C hg38:Y:13045457-T-C | ** | |||||||
| hg19:Y:15173496-T-TAAA hg38:Y:13061582-T-TAAA | 11×A | ** | ||||||
| hg19:Y:15309780-AT-A hg38:Y:13197885-AT-A | ** | |||||||
| hg19:Y:15388521-C-G hg38:Y:13276641-C-G | ** | |||||||
| hg19:Y:15655642-C-A hg38:Y:13543762-C-A | ** | |||||||
| hg19:Y:15732717-C-A hg38:Y:13620837-C-A | ** | |||||||
| hg19:Y:15881972-G-C hg38:Y:13770092-G-C | ** | |||||||
| hg19:Y:15976569-G-A hg38:Y:13864689-G-A | ** | |||||||
| hg19:Y:16427542-G-T hg38:Y:14315662-G-T | ** | |||||||
| hg19:Y:16445645-C-A hg38:Y:14333765-C-A | ** | |||||||
| hg19:Y:16445729-C-A hg38:Y:14333849-C-A | ** | |||||||
| hg19:Y:17039067-T-C hg38:Y:14927187-T-C | ** | |||||||
| hg19:Y:17070889-T-TA hg38:Y:14959009-T-TA | ** | |||||||
| hg19:Y:17798815-C-A hg38:Y:15686935-C-A | ** | |||||||
| hg19:Y:18487808-T-C hg38:Y:16375928-T-C | P6_Dst | 19×A | ** | |||||
| hg19:Y:18487827-AC-A hg38:Y:16375947-AC-A | P6_Dst | ** | ||||||
| hg19:Y:19043789-C-A hg38:Y:16931909-C-A | ** | |||||||
| hg19:Y:19071525-C-T hg38:Y:16959645-C-T | ** | |||||||
| hg19:Y:19109984-A-T hg38:Y:16998104-A-T | ** | |||||||
| hg19:Y:20825031-C-A hg38:Y:18663145-C-A | P4_Gap | ** | ||||||
| hg19:Y:22040798-C-A hg38:Y:19878912-C-A | ** | |||||||
| hg19:Y:22198494-G-T hg38:Y:20036608-G-T | ** | |||||||
| hg19:Y:22526259-C-A hg38:Y:20364373-C-A | ** | |||||||
| hg19:Y:22563006-G-A hg38:Y:20401120-G-A | FT361331 | ** | ||||||
| hg19:Y:22956134-T-A hg38:Y:20794248-T-A | ** | |||||||
| hg19:Y:23252739-C-A hg38:Y:21090853-C-A | ** | |||||||
| hg19:Y:23341822-T-G hg38:Y:21179936-T-G | ** | |||||||
| hg19:Y:23475642-G-T hg38:Y:21313756-G-T | ** | |||||||
| hg19:Y:23528922-G-T hg38:Y:21367036-G-T | ** | |||||||
| hg19:Y:24125405-C-A hg38:Y:21979258-C-A | P3_b1 | ** | ||||||
| hg19:Y:24877612-G-T hg38:Y:22731465-G-T | g1 | ** | ||||||
| hg19:Y:25997429-C-A hg38:Y:23851282-C-A | P1_Y1 | ** | ||||||
| hg19:Y:27791858-C-A hg38:Y:25645711-C-A | P1_Y2 | ** | ||||||
| hg19:Y:27791866-T-A hg38:Y:25645719-T-A | P1_Y2 | ** | ||||||
| hg19:Y:27810350-A-G hg38:Y:25664203-A-G | P1_Y2 | ** | ||||||
| hg19:Y:27906835-TCTTAA-T hg38:Y:25760688-TCTTAA-T | P1_Y2 | ** | ||||||
| hg19:Y:28632811-T-G hg38:Y:26486664-T-G | ** | |||||||
| hg19:Y:28658655-C-A hg38:Y:26512508-C-A | ** | |||||||
| hg38:Y:56837886-A-C | ** | |||||||
| hg19:Y:20595170-G-A hg38:Y:18433284-G-A | P5_Dst | ** | ||||||
| hg19:Y:13579392-C-T hg38:Y:11423716-C-T | ** | |||||||
| hg19:Y:21021594-G-T hg38:Y:18859708-G-T | P4_Dst | ** | ||||||
| hg19:Y:26006326-T-TAG hg38:Y:23860179-T-TAG | P1_Y1 | ** | ||||||
| hg19:Y:3463082-TG-T hg38:Y:3595041-TG-T | ** | |||||||
| hg19:Y:4735485-C-A hg38:Y:4867444-C-A | ** | |||||||
| hg19:Y:5883204-C-T hg38:Y:6015163-C-T | ** | |||||||
| hg38:Y:10949518-C-A | ** | |||||||
| hg19:Y:15631510-G-A hg38:Y:13519630-G-A | ** | |||||||
| hg19:Y:18139233-A-T hg38:Y:16027353-A-T | ** | |||||||
| hg19:Y:18297512-T-C hg38:Y:16185632-T-C | P6_Prx | ** | ||||||
| hg19:Y:18872084-T-C hg38:Y:16760204-T-C | ** | |||||||
| hg19:Y:19019772-A-G hg38:Y:16907892-A-G | ** | |||||||
| hg19:Y:19672431-T-G hg38:Y:17560551-T-G | P5_Prx | ** | ||||||
| hg19:Y:21392891-A-G hg38:Y:19231005-A-G | ** | |||||||
| hg19:Y:21578156-G-A hg38:Y:19416270-G-A | ** | |||||||
| hg19:Y:22262587-T-C hg38:Y:20100701-T-C | DYZ19 | ** | ||||||
| hg19:Y:22633898-T-C hg38:Y:20472012-T-C | ** | |||||||
| hg19:Y:26004251-G-T hg38:Y:23858104-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26071026-G-T hg38:Y:23924879-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26185536-G-T hg38:Y:24039389-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26185547-C-A hg38:Y:24039400-C-A | P1_Y1 | ** | ||||||
| hg19:Y:13476682-CCT-C hg38:Y:11321006-CCT-C | *** | |||||||
| hg19:Y:22256822-G-C hg38:Y:20094936-G-C | BY214483 | DYZ19 | *** | |||||
| hg19:Y:58856037-G-A hg38:Y:56734834-C-T | *** | |||||||
| hg19:Y:2807073-ACT-A hg38:Y:2939032-ACT-A | *** | |||||||
| hg19:Y:13938861-G-A hg38:Y:11818155-G-A | *** | |||||||
| hg19:Y:16665526-ATATAT-A hg38:Y:14553646-ATATAT-A | *** | |||||||
| hg19:Y:13466108-G-T hg38:Y:11310432-G-T | *** | |||||||
| hg19:Y:13611988-G-GTTTTTT hg38:Y:11456312-G-GTTTTTT | 19×T | *** | ||||||
| hg19:Y:13466087-T-C hg38:Y:11310411-T-C | *** | |||||||
| hg19:Y:22256836-T-C hg38:Y:20094950-T-C | BY160854 | DYZ19 | *** | |||||
| hg19:Y:17192865-TGT-T,TGG hg38:Y:15080985-TGT-T,TGG | *** | |||||||
| hg19:Y:23127414-CAAAAA-C hg38:Y:20965528-CAAAAA-C | 24×A | *** | ||||||
| hg38:Y:10980745-A-T | *** | |||||||
| hg19:Y:15480111-AT-A,ATT hg38:Y:13368231-AT-A,ATT | 21×T | *** | ||||||
| hg38:Y:11019466-T-A | *** | |||||||
| hg19:Y:16478359-CAAAAA-C hg38:Y:14366479-CAAAAA-C | 18×A | *** | ||||||
| hg19:Y:16730003-GA-G,GAA hg38:Y:14618123-GA-G,GAA | 17×A | *** | ||||||
| hg19:Y:22268547-G-A hg38:Y:20106661-G-A | DYZ19 | *** | ||||||
| hg38:Y:10885171-CCACTGAACTC-C,CCATTGCACTG | *** | |||||||
| hg19:Y:13461005-T-A hg38:Y:11305329-T-A | *** | |||||||
| hg19:Y:6863818-CTTTTTTTT-C,CTTTTTTT hg38:Y:6995777-CTTTTTTTT-C,CTTTTTTT | 21×T | *** | ||||||
| hg38:Y:10892519-A-ATCCCG | *** | |||||||
| hg38:Y:10892549-A-C | *** | |||||||
| hg19:Y:13453383-CGGGTTGATTC-G hg38:Y:11297707-CGGGTTGATTC-G | *** | |||||||
| hg38:Y:56828827-T-A | *** | |||||||
| hg19:Y:6446724-TA-T hg38:Y:6578683-TA-T | 10×A | *** | ||||||
| hg19:Y:14009617-C-A hg38:Y:11888911-C-A | *** | |||||||
| hg19:Y:22561373-C-A hg38:Y:20399487-C-A | *** | |||||||
| hg19:Y:17004618-CAAAA-C hg38:Y:14892738-CAAAA-C | 14×A | *** | ||||||
| hg19:Y:13466105-A-T hg38:Y:11310429-A-T | *** | |||||||
| hg19:Y:13705596-G-A hg38:Y:11549920-G-A | DYZ17 | *** | ||||||
| hg38:Y:10877063-A-C | *** | |||||||
| hg19:Y:17013733-AT-A,ATT hg38:Y:14901853-AT-A,ATT | 14×T | *** | ||||||
| hg38:Y:10877070-C-T | *** | |||||||
| hg19:Y:6693723-C-A hg38:Y:6825682-C-A | *** | |||||||
| hg19:Y:8736289-C-A hg38:Y:8868248-C-A | *** | |||||||
| hg38:Y:56850481-AAC-A,AGC | *** | |||||||
| hg19:Y:13484127-T-A hg38:Y:11328451-T-A | *** | |||||||
| hg19:Y:23416511-CTTT-C,CT hg38:Y:21254625-CTTT-C,CT | 16×T | *** | ||||||
| hg19:Y:21185176-C-A hg38:Y:19023290-C-A | *** | |||||||
| hg19:Y:28791263-C-T hg38:Y:26645116-C-T | *** | |||||||
| hg38:Y:10814308-C-A | *** | |||||||
| hg19:Y:9047948-G-T hg38:Y:9210339-G-T | *** | |||||||
| hg19:Y:13484158-T-A hg38:Y:11328482-T-A | *** | |||||||
| hg19:Y:8020221-CAAAA-C,CAAA hg38:Y:8152180-CAAAA-C,CAAA | 22×A | *** | ||||||
| hg19:Y:3412173-C-T hg38:Y:3544132-C-T | *** | |||||||
| hg38:Y:10661296-T-A,C | *** | |||||||
| hg38:Y:10662368-C-A | *** | |||||||
| hg38:Y:10682655-A-G | *** | |||||||
| hg38:Y:10867963-T-C | *** | |||||||
| hg38:Y:10877050-A-G | *** | |||||||
| hg38:Y:10877055-T-C | *** | |||||||
| hg38:Y:10877065-T-TTACTC | *** | |||||||
| hg38:Y:10948245-CCACAT-C | *** | |||||||
| hg19:Y:14009628-G-A hg38:Y:11888922-G-A | *** | |||||||
| hg19:Y:14180761-T-C hg38:Y:12060055-T-C | *** | |||||||
| hg19:Y:14817059-C-A hg38:Y:12705130-C-A | *** | |||||||
| hg19:Y:15161292-GAAAAA-G,GAAAA hg38:Y:13049378-GAAAAA-G,GAAAA | 22×A | *** | ||||||
| hg19:Y:17310939-GT-G,GTT hg38:Y:15199059-GT-G,GTT | 13×T | *** | ||||||
| hg19:Y:21265987-C-A hg38:Y:19104101-C-A | *** | |||||||
| hg19:Y:21916582-CA-C hg38:Y:19754696-CA-C | 9×A | *** | ||||||
| hg19:Y:22283754-T-G hg38:Y:20121868-T-G | DYZ19 | *** | ||||||
| hg19:Y:23391564-C-A hg38:Y:21229678-C-A | *** | |||||||
| hg38:Y:56830313-CAT-C,CAC | *** | |||||||
| hg19:Y:13484170-G-T hg38:Y:11328494-G-T | *** | |||||||
| hg38:Y:56848103-G-C,T | *** | |||||||
| hg38:Y:56830815-CA-C | *** | |||||||
| hg19:Y:13469944-C-A hg38:Y:11314268-C-A | *** | |||||||
| hg19:Y:13475844-C-G hg38:Y:11320168-C-G | *** | |||||||
| hg19:Y:13475864-C-G hg38:Y:11320188-C-G | *** | |||||||
| hg19:Y:13475889-G-A hg38:Y:11320213-G-A | *** | |||||||
| hg19:Y:13484141-A-C hg38:Y:11328465-A-C | *** | |||||||
| hg19:Y:21091453-G-A hg38:Y:18929567-G-A | *** | |||||||
| hg19:Y:3632369-T-C hg38:Y:3764328-T-C | *** | |||||||
| hg19:Y:5963850-C-T hg38:Y:6095809-C-T | *** | |||||||
| hg38:Y:10630018-T-A,G | *** | |||||||
| hg38:Y:10630023-C-A,G | *** | |||||||
| hg38:Y:10935574-CTCCACTCCAT-C,CTCCATTCCAT | *** | |||||||
| hg19:Y:13391470-A-G hg38:Y:11235794-A-G | *** | |||||||
| hg19:Y:15171497-G-A hg38:Y:13059583-G-A | *** | |||||||
| hg19:Y:16000758-C-T hg38:Y:13888878-C-T | *** | |||||||
| hg19:Y:16605555-A-C hg38:Y:14493675-A-C | *** | |||||||
| hg19:Y:17065205-G-A hg38:Y:14953325-G-A | *** | |||||||
| hg19:Y:17302274-C-A hg38:Y:15190394-C-A | *** | |||||||
| hg19:Y:17925325-C-T hg38:Y:15813445-C-T | *** | |||||||
| hg19:Y:18549382-C-T hg38:Y:16437502-C-T | BY51253 | *** | ||||||
| hg19:Y:19146541-T-C hg38:Y:17034661-T-C | *** | |||||||
| hg19:Y:22210483-A-G hg38:Y:20048597-A-G | *** | |||||||
| hg19:Y:23335480-C-A hg38:Y:21173594-C-A | *** | |||||||
| hg19:Y:23335481-A-C hg38:Y:21173595-A-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 447189 | 9638480 | 7886609 | 7791341 |
| Kit: 447189 | 14768568 | 9241278 | 8228426 |
| Used in age calculations | 14768568 | 9241278 | 8228426 |
| Counts of SNPs | 1 | 1 |
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