Smith
BigY2: 573885Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 573885 |
|---|---|---|---|---|---|---|---|
| hg38:Y:11653786-CGAATGGAATG-C | DYZ17 | + | |||||
| hg19:Y:7356103-C-T hg38:Y:7488062-C-T | BY189843 | Y | Y | + | |||
| hg19:Y:7782714-T-G hg38:Y:7914673-T-G | BY189944 | Y | Y | + | |||
| hg19:Y:7830325-A-G hg38:Y:7962284-A-G | BY189959 | Y | Y | + | |||
| hg19:Y:9967814-A-G hg38:Y:10130205-A-G | BY209435 | Y | + | ||||
| hg19:Y:13822092-G-A hg38:Y:11701386-G-A | BY190430 | DYZ17 | + | ||||
| hg19:Y:16250303-C-T hg38:Y:14138423-C-T | BY190895 | Y | Y | + | |||
| hg19:Y:16432411-C-T hg38:Y:14320531-C-T | BY190940 | Y | Y | + | |||
| hg19:Y:18426337-C-T hg38:Y:16314457-C-T | BY191369 | P6_Gap | + | ||||
| hg19:Y:22316655-C-A hg38:Y:20154769-C-A | BY3398 | DYZ19 | * | ||||
| hg19:Y:10051380-A-G hg38:Y:10213771-A-G | ** | ||||||
| hg19:Y:13142948-GCATTCCATTC-G hg38:Y:10632434-GCATTCCATTC-G | 11×CATTC | ** | |||||
| hg19:Y:18756798-GTTTT-G hg38:Y:16644918-GTTTT-G | 19×T | ** | |||||
| hg38:Y:10972907-T-C | ** | ||||||
| hg38:Y:10664794-C-G | ** | ||||||
| hg19:Y:21963860-C-A hg38:Y:19801974-C-A | ** | ||||||
| hg19:Y:23317720-CT-C hg38:Y:21155834-CT-C | 10×T | ** | |||||
| hg19:Y:14785664-C-G hg38:Y:12673734-C-G | ** | ||||||
| hg38:Y:10684291-C-T | ** | ||||||
| hg38:Y:10771935-T-C | ** | ||||||
| hg38:Y:10771940-C-G | ** | ||||||
| hg19:Y:15173763-C-A hg38:Y:13061849-C-A | ** | ||||||
| hg38:Y:10792413-A-AC | ** | ||||||
| hg38:Y:10792418-A-C | ** | ||||||
| hg38:Y:10792419-T-TCCACTGCACTCCGC | ** | ||||||
| hg19:Y:27424003-C-A hg38:Y:25277856-C-A | P1_g3 | ** | |||||
| hg19:Y:13856327-G-GA hg38:Y:11735621-G-GA | DYZ17 | ** | |||||
| hg38:Y:11022072-ACTCCT-A | ** | ||||||
| hg38:Y:10836501-T-C | ** | ||||||
| hg19:Y:18710379-C-A hg38:Y:16598499-C-A | ** | ||||||
| hg38:Y:10884666-TCATTC-T | ** | ||||||
| hg19:Y:23419514-C-A hg38:Y:21257628-C-A | ** | ||||||
| hg19:Y:13856353-G-C hg38:Y:11735647-G-C | DYZ17 | ** | |||||
| hg19:Y:6698832-G-GTT hg38:Y:6830791-G-GTT | 12×T | ** | |||||
| hg19:Y:23415292-ATATATATG-A hg38:Y:21253406-ATATATATG-A | ** | ||||||
| hg19:Y:7655243-G-GA hg38:Y:7787202-G-GA | 9×A | ** | |||||
| hg19:Y:14504794-AAAAAG-A hg38:Y:12392999-AAAAAG-A | 4×AAAAG | ** | |||||
| hg19:Y:17363326-C-T hg38:Y:15251446-C-T | ** | ||||||
| hg19:Y:17363327-A-G hg38:Y:15251447-A-G | ** | ||||||
| hg38:Y:11029768-T-C | ** | ||||||
| hg19:Y:27982179-ATT-A hg38:Y:25836032-ATT-A | P1_Y2 | ** | |||||
| hg19:Y:27982182-AT-A hg38:Y:25836035-AT-A | P1_Y2 | ** | |||||
| hg19:Y:9989993-G-T hg38:Y:10152384-G-T | ** | ||||||
| hg38:Y:56836550-C-A | ** | ||||||
| hg19:Y:4229526-C-A hg38:Y:4361485-C-A | ** | ||||||
| hg19:Y:28514558-C-A hg38:Y:26368411-C-A | ** | ||||||
| hg38:Y:11029803-A-C | ** | ||||||
| hg38:Y:10926542-A-G | ** | ||||||
| hg38:Y:11029842-T-C | ** | ||||||
| hg38:Y:11025605-A-C | ** | ||||||
| hg38:Y:11659080-T-C | DYZ17 | ** | |||||
| hg19:Y:14458239-C-A hg38:Y:12337512-C-A | ** | ||||||
| hg19:Y:15967558-C-A hg38:Y:13855678-C-A | ** | ||||||
| hg19:Y:5313541-C-A hg38:Y:5445500-C-A | ** | ||||||
| hg38:Y:10885264-T-G | ** | ||||||
| hg19:Y:17517162-C-A hg38:Y:15405282-C-A | ** | ||||||
| hg19:Y:13466038-G-GGTTT hg38:Y:11310362-G-GGTTT | ** | ||||||
| hg19:Y:13466039-TGCAG-T hg38:Y:11310363-TGCAG-T | ** | ||||||
| hg38:Y:11005539-C-A | ** | ||||||
| hg38:Y:11037070-C-A | ** | ||||||
| hg38:Y:11025594-T-A | ** | ||||||
| hg38:Y:11025597-T-C | ** | ||||||
| hg19:Y:15472406-C-A hg38:Y:13360526-C-A | ** | ||||||
| hg19:Y:14300948-C-A hg38:Y:12180242-C-A | ** | ||||||
| hg38:Y:56763542-A-T | ** | ||||||
| hg19:Y:7421342-C-A hg38:Y:7553301-C-A | ** | ||||||
| hg38:Y:11027040-A-T | ** | ||||||
| hg38:Y:11027054-C-G | ** | ||||||
| hg38:Y:11027061-T-A | ** | ||||||
| hg38:Y:10771924-T-C | ** | ||||||
| hg38:Y:56763568-C-A | ** | ||||||
| hg38:Y:10987245-T-A | ** | ||||||
| hg19:Y:6593456-C-A hg38:Y:6725415-C-A | ** | ||||||
| hg19:Y:18316156-A-AG hg38:Y:16204276-A-AG | P6_Prx | ** | |||||
| hg19:Y:14806127-C-A hg38:Y:12694198-C-A | ** | ||||||
| hg38:Y:10673577-C-A | ** | ||||||
| hg38:Y:10630689-C-T | ** | ||||||
| hg19:Y:18949623-C-A hg38:Y:16837743-C-A | ** | ||||||
| hg38:Y:11025565-A-T | ** | ||||||
| hg38:Y:11025588-G-A | ** | ||||||
| hg38:Y:11025608-A-G | ** | ||||||
| hg19:Y:14785659-A-G hg38:Y:12673729-A-G | ** | ||||||
| hg19:Y:6996842-G-A hg38:Y:7128801-G-A | FGC57751 | ** | |||||
| hg19:Y:14453709-GAAAA-G hg38:Y:12332982-GAAAA-G | 18×A | ** | |||||
| hg19:Y:7974149-C-A hg38:Y:8106108-C-A | ** | ||||||
| hg19:Y:23272347-T-G hg38:Y:21110461-T-G | ** | ||||||
| hg19:Y:19509775-T-C hg38:Y:17397895-T-C | ** | ||||||
| hg19:Y:7228300-C-A hg38:Y:7360259-C-A | ** | ||||||
| hg19:Y:18614512-C-A hg38:Y:16502632-C-A | ** | ||||||
| hg19:Y:3950900-C-A hg38:Y:4082859-C-A | ** | ||||||
| hg38:Y:10817368-C-A | ** | ||||||
| hg19:Y:21305091-C-A hg38:Y:19143205-C-A | ** | ||||||
| hg19:Y:2788257-G-A hg38:Y:2920216-G-A | ** | ||||||
| hg38:Y:11659074-AC-A | DYZ17 | ** | |||||
| hg19:Y:3267711-C-A hg38:Y:3399670-C-A | ** | ||||||
| hg19:Y:18688493-C-A hg38:Y:16576613-C-A | ** | ||||||
| hg38:Y:10987275-G-T | ** | ||||||
| hg19:Y:21953535-C-T hg38:Y:19791649-C-T | 15×T | ** | |||||
| hg19:Y:27423998-G-T hg38:Y:25277851-G-T | P1_g3 | ** | |||||
| hg19:Y:18443468-G-T hg38:Y:16331588-G-T | P6_Dst | ** | |||||
| hg19:Y:21542044-C-A hg38:Y:19380158-C-A | ** | ||||||
| hg19:Y:9437334-C-A hg38:Y:9599725-C-A | ** | ||||||
| hg19:Y:16345135-C-T hg38:Y:14233255-C-T | FT13294 | 18×TCT | ** | ||||
| hg19:Y:28793783-G-C hg38:Y:26647636-G-C | ** | ||||||
| hg19:Y:16491444-G-A hg38:Y:14379564-G-A | ** | ||||||
| hg19:Y:26514952-C-CAA hg38:Y:24368805-C-CAA | P1_Y1 | ** | |||||
| hg19:Y:9928143-C-A hg38:Y:10090534-C-A | ** | ||||||
| hg19:Y:21563028-T-C hg38:Y:19401142-T-C | ** | ||||||
| hg38:Y:10841053-A-T | ** | ||||||
| hg19:Y:7013323-C-A hg38:Y:7145282-C-A | ** | ||||||
| hg19:Y:14449775-C-A hg38:Y:12329048-C-A | ** | ||||||
| hg38:Y:11016328-A-T | ** | ||||||
| hg19:Y:3012765-C-CAT hg38:Y:3144724-C-CAT | ** | ||||||
| hg19:Y:15542607-C-A hg38:Y:13430727-C-A | ** | ||||||
| hg19:Y:28492418-C-A hg38:Y:26346271-C-A | ** | ||||||
| hg38:Y:11007574-T-A | ** | ||||||
| hg38:Y:11005477-G-A | ** | ||||||
| hg19:Y:22974276-C-A hg38:Y:20812390-C-A | ** | ||||||
| hg38:Y:10662769-C-A | ** | ||||||
| hg38:Y:10772627-A-C | ** | ||||||
| hg19:Y:7183580-C-A hg38:Y:7315539-C-A | ** | ||||||
| hg19:Y:22520811-AG-T hg38:Y:20358925-AG-T | ** | ||||||
| hg19:Y:9639196-C-A hg38:Y:9801587-C-A | IR3_Prx | ** | |||||
| hg19:Y:21238149-C-A hg38:Y:19076263-C-A | ** | ||||||
| hg19:Y:28742651-C-A hg38:Y:26596504-C-A | ** | ||||||
| hg19:Y:3592601-C-A hg38:Y:3724560-C-A | ** | ||||||
| hg38:Y:10772750-G-T | ** | ||||||
| hg19:Y:23531728-C-A hg38:Y:21369842-C-A | ** | ||||||
| hg19:Y:8987612-A-C hg38:Y:9150003-A-C | ** | ||||||
| hg19:Y:23333883-C-A hg38:Y:21171997-C-A | ** | ||||||
| hg38:Y:10647971-C-A | ** | ||||||
| hg38:Y:10949590-C-T | ** | ||||||
| hg19:Y:9993490-C-A hg38:Y:10155881-C-A | ** | ||||||
| hg38:Y:10987185-T-C | ** | ||||||
| hg19:Y:7976634-C-A hg38:Y:8108593-C-A | ** | ||||||
| hg19:Y:13613683-C-A hg38:Y:11458007-C-A | ** | ||||||
| hg19:Y:6520065-C-A hg38:Y:6652024-C-A | ** | ||||||
| hg19:Y:7234440-C-A hg38:Y:7366399-C-A | ** | ||||||
| hg38:Y:11007545-C-T | ** | ||||||
| hg38:Y:11007581-C-A | ** | ||||||
| hg19:Y:15787931-C-A hg38:Y:13676051-C-A | ** | ||||||
| hg19:Y:21104964-ATT-A hg38:Y:18943078-ATT-A | 11×T | ** | |||||
| hg19:Y:22815526-A-TT hg38:Y:20653640-A-TT | ** | ||||||
| hg19:Y:21153152-C-A hg38:Y:18991266-C-A | ** | ||||||
| hg19:Y:23046177-G-A hg38:Y:20884291-G-A | ** | ||||||
| hg19:Y:13460579-A-T hg38:Y:11304903-A-T | ** | ||||||
| hg19:Y:15439985-C-A hg38:Y:13328105-C-A | ** | ||||||
| hg19:Y:2799550-G-A hg38:Y:2931509-G-A | ** | ||||||
| hg19:Y:2799587-A-G hg38:Y:2931546-A-G | ** | ||||||
| hg19:Y:14249540-C-A hg38:Y:12128834-C-A | ** | ||||||
| hg38:Y:11026020-C-CTCCAT | ** | ||||||
| hg19:Y:18235683-C-CAA hg38:Y:16123803-C-CAA | 12×A | ** | |||||
| hg19:Y:19135109-C-A hg38:Y:17023229-C-A | ** | ||||||
| hg19:Y:17716677-C-A hg38:Y:15604797-C-A | ** | ||||||
| hg19:Y:8051978-C-A hg38:Y:8183937-C-A | ** | ||||||
| hg19:Y:6248919-GAAAAAAGC-G hg38:Y:6380878-GAAAAAAGC-G | IR3_Dst | ** | |||||
| hg19:Y:19931621-G-GAT hg38:Y:17819741-G-GAT | P5_Prx | ** | |||||
| hg19:Y:22236942-A-C hg38:Y:20075056-A-C | DYZ19 | ** | |||||
| hg19:Y:8776844-C-A hg38:Y:8908803-C-A | ** | ||||||
| hg38:Y:10655781-C-A | ** | ||||||
| hg19:Y:22804144-AT-A hg38:Y:20642258-AT-A | ** | ||||||
| hg19:Y:2741360-C-A hg38:Y:2873319-C-A | ** | ||||||
| hg19:Y:15733708-CAA-C hg38:Y:13621828-CAA-C | 11×A | ** | |||||
| hg38:Y:11008663-A-G | ** | ||||||
| hg19:Y:28514917-C-A hg38:Y:26368770-C-A | ** | ||||||
| hg19:Y:4088214-C-A hg38:Y:4220173-C-A | ** | ||||||
| hg38:Y:10973831-T-C | ** | ||||||
| hg19:Y:4756332-C-A hg38:Y:4888291-C-A | ** | ||||||
| hg19:Y:19286264-C-A hg38:Y:17174384-C-A | ** | ||||||
| hg19:Y:28478802-C-A hg38:Y:26332655-C-A | ** | ||||||
| hg19:Y:14622169-C-T hg38:Y:12510367-C-T | FGC5227 | ** | |||||
| hg38:Y:11037072-C-G | ** | ||||||
| hg38:Y:10928791-C-A | ** | ||||||
| hg19:Y:18769416-C-A hg38:Y:16657536-C-A | ** | ||||||
| hg38:Y:10987270-A-T | ** | ||||||
| hg19:Y:13594372-G-T hg38:Y:11438696-G-T | ** | ||||||
| hg19:Y:3798365-C-A hg38:Y:3930324-C-A | ** | ||||||
| hg19:Y:17110788-C-A hg38:Y:14998908-C-A | ** | ||||||
| hg38:Y:10941076-C-A | ** | ||||||
| hg19:Y:24458731-C-A hg38:Y:22312584-C-A | ** | ||||||
| hg19:Y:7144067-G-A hg38:Y:7276026-G-A | ** | ||||||
| hg19:Y:28763510-C-A hg38:Y:26617363-C-A | ** | ||||||
| hg38:Y:11008673-G-T | ** | ||||||
| hg19:Y:15489390-T-C hg38:Y:13377510-T-C | ** | ||||||
| hg19:Y:2741363-C-T hg38:Y:2873322-C-T | ** | ||||||
| hg19:Y:2783198-C-A hg38:Y:2915157-C-A | ** | ||||||
| hg19:Y:2798964-C-A hg38:Y:2930923-C-A | ** | ||||||
| hg19:Y:2799588-T-C hg38:Y:2931547-T-C | ** | ||||||
| hg19:Y:2811097-C-A hg38:Y:2943056-C-A | ** | ||||||
| hg19:Y:2859228-T-A hg38:Y:2991187-T-A | ** | ||||||
| hg19:Y:2860664-T-C hg38:Y:2992623-T-C | ** | ||||||
| hg19:Y:2907123-G-A hg38:Y:3039082-G-A | ** | ||||||
| hg19:Y:3023595-C-A hg38:Y:3155554-C-A | ** | ||||||
| hg19:Y:3253198-A-C hg38:Y:3385157-A-C | ** | ||||||
| hg19:Y:3621344-T-G hg38:Y:3753303-T-G | ** | ||||||
| hg19:Y:3770738-C-A hg38:Y:3902697-C-A | ** | ||||||
| hg19:Y:4093606-C-A hg38:Y:4225565-C-A | ** | ||||||
| hg19:Y:4243134-C-A hg38:Y:4375093-C-A | ** | ||||||
| hg19:Y:4371026-G-T hg38:Y:4502985-G-T | ** | ||||||
| hg19:Y:4781003-T-G hg38:Y:4912962-T-G | ** | ||||||
| hg19:Y:4804713-T-C hg38:Y:4936672-T-C | ** | ||||||
| hg19:Y:5743198-C-A hg38:Y:5875157-C-A | ** | ||||||
| hg19:Y:6249935-C-A hg38:Y:6381894-C-A | IR3_Dst | ** | |||||
| hg19:Y:6277359-G-GGC hg38:Y:6409318-G-GGC | IR3_Dst | ** | |||||
| hg19:Y:6291097-G-T hg38:Y:6423056-G-T | IR3_Dst | ** | |||||
| hg19:Y:6348099-A-G hg38:Y:6480058-A-G | ** | ||||||
| hg19:Y:6354650-A-G hg38:Y:6486609-A-G | ** | ||||||
| hg19:Y:6363131-A-G hg38:Y:6495090-A-G | ** | ||||||
| hg19:Y:6397414-A-G hg38:Y:6529373-A-G | ** | ||||||
| hg19:Y:6872560-C-A hg38:Y:7004519-C-A | ** | ||||||
| hg19:Y:6890399-C-A hg38:Y:7022358-C-A | ** | ||||||
| hg19:Y:6954849-G-C hg38:Y:7086808-G-C | ** | ||||||
| hg19:Y:7035751-A-G hg38:Y:7167710-A-G | ** | ||||||
| hg19:Y:7213105-CAG-C hg38:Y:7345064-CAG-C | ** | ||||||
| hg19:Y:7228438-C-A hg38:Y:7360397-C-A | ** | ||||||
| hg19:Y:7311192-A-T hg38:Y:7443151-A-T | ** | ||||||
| hg19:Y:7330622-C-A hg38:Y:7462581-C-A | ** | ||||||
| hg19:Y:7358084-T-A hg38:Y:7490043-T-A | ** | ||||||
| hg19:Y:7368850-T-C hg38:Y:7500809-T-C | ** | ||||||
| hg19:Y:7401054-C-A hg38:Y:7533013-C-A | ** | ||||||
| hg19:Y:7423881-A-C hg38:Y:7555840-A-C | ** | ||||||
| hg19:Y:7724681-G-T hg38:Y:7856640-G-T | ** | ||||||
| hg19:Y:7749483-G-A hg38:Y:7881442-G-A | FT65004 | ** | |||||
| hg19:Y:7756738-C-A hg38:Y:7888697-C-A | ** | ||||||
| hg19:Y:7962996-A-G hg38:Y:8094955-A-G | ** | ||||||
| hg19:Y:8070100-G-A hg38:Y:8202059-G-A | FT185480 | ** | |||||
| hg19:Y:8102086-A-G hg38:Y:8234045-A-G | ** | ||||||
| hg19:Y:8143535-T-G hg38:Y:8275494-T-G | ** | ||||||
| hg19:Y:8750094-A-G hg38:Y:8882053-A-G | ** | ||||||
| hg19:Y:8788798-C-T hg38:Y:8920757-C-T | ** | ||||||
| hg19:Y:8844733-C-A hg38:Y:8976692-C-A | ** | ||||||
| hg19:Y:9178529-G-A hg38:Y:9340920-G-A | ** | ||||||
| hg19:Y:9601586-C-CTTTT hg38:Y:9763977-C-CTTTT | IR3_Prx | 16×T | ** | ||||
| hg19:Y:9707092-A-C hg38:Y:9869483-A-C | IR3_Prx | ** | |||||
| hg19:Y:9707102-A-C hg38:Y:9869493-A-C | IR3_Prx | ** | |||||
| hg19:Y:9707112-T-G hg38:Y:9869503-T-G | IR3_Prx | ** | |||||
| hg19:Y:9859209-A-T hg38:Y:10021600-A-T | ** | ||||||
| hg38:Y:10684101-C-A | ** | ||||||
| hg38:Y:10690816-G-T | ** | ||||||
| hg38:Y:10693757-T-C | ** | ||||||
| hg38:Y:10753778-C-A | ** | ||||||
| hg38:Y:10758367-T-G | ** | ||||||
| hg38:Y:10764976-C-A | ** | ||||||
| hg38:Y:10789178-T-C | ** | ||||||
| hg38:Y:10813189-C-A | ** | ||||||
| hg38:Y:10826550-T-G | ** | ||||||
| hg38:Y:10826728-C-A | ** | ||||||
| hg38:Y:10827767-C-A | FT432996 | ** | |||||
| hg38:Y:10924988-C-T | ** | ||||||
| hg38:Y:10932957-CTACAT-C | ** | ||||||
| hg38:Y:10949568-C-T | ** | ||||||
| hg38:Y:10949591-T-C | ** | ||||||
| hg38:Y:10949601-T-TC | ** | ||||||
| hg38:Y:10949606-T-C | ** | ||||||
| hg38:Y:10949614-A-G | ** | ||||||
| hg38:Y:10954754-T-G | ** | ||||||
| hg38:Y:10963360-C-A | FT438400 | ** | |||||
| hg38:Y:10981555-AC-A | ** | ||||||
| hg38:Y:11008676-C-G | ** | ||||||
| hg38:Y:11008680-C-T | ** | ||||||
| hg38:Y:11008685-T-A | ** | ||||||
| hg38:Y:11026065-C-A | ** | ||||||
| hg19:Y:13202792-C-A hg38:Y:11047116-C-A | ** | ||||||
| hg19:Y:13350871-A-C hg38:Y:11195195-A-C | ** | ||||||
| hg19:Y:13485832-C-A hg38:Y:11330156-C-A | ** | ||||||
| hg19:Y:13513084-G-A hg38:Y:11357408-G-A | ** | ||||||
| hg38:Y:11647431-C-A | DYZ17 | ** | |||||
| hg38:Y:11666567-G-A | DYZ17 | ** | |||||
| hg38:Y:11666571-G-C | DYZ17 | ** | |||||
| hg19:Y:13923836-G-A hg38:Y:11803130-G-A | ** | ||||||
| hg19:Y:14060084-CT-C hg38:Y:11939378-CT-C | ** | ||||||
| hg19:Y:14069293-C-A hg38:Y:11948587-C-A | ** | ||||||
| hg19:Y:14296373-C-A hg38:Y:12175667-C-A | ** | ||||||
| hg19:Y:14350278-A-G hg38:Y:12229573-A-G | ** | ||||||
| hg19:Y:14350279-T-G hg38:Y:12229574-T-G | ** | ||||||
| hg19:Y:14361019-C-A hg38:Y:12240314-C-A | ** | ||||||
| hg19:Y:14430604-C-T hg38:Y:12309877-C-T | ** | ||||||
| hg19:Y:14464368-C-A hg38:Y:12343641-C-A | ** | ||||||
| hg19:Y:14473611-C-A hg38:Y:12352880-C-A | ** | ||||||
| hg19:Y:14520782-T-C hg38:Y:12408983-T-C | ** | ||||||
| hg19:Y:14560170-G-T hg38:Y:12448371-G-T | ** | ||||||
| hg19:Y:14622177-C-G hg38:Y:12510375-C-G | ** | ||||||
| hg19:Y:14735333-C-A hg38:Y:12623401-C-A | ** | ||||||
| hg19:Y:14779679-C-A hg38:Y:12667749-C-A | ** | ||||||
| hg19:Y:14817228-C-A hg38:Y:12705299-C-A | ** | ||||||
| hg19:Y:14844975-C-A hg38:Y:12733041-C-A | ** | ||||||
| hg19:Y:14852984-T-C hg38:Y:12741050-T-C | ** | ||||||
| hg19:Y:14939701-C-A hg38:Y:12827775-C-A | ** | ||||||
| hg19:Y:14970337-C-A hg38:Y:12858412-C-A | ** | ||||||
| hg19:Y:15126120-A-C hg38:Y:13014207-A-C | ** | ||||||
| hg19:Y:15126126-T-C hg38:Y:13014213-T-C | ** | ||||||
| hg19:Y:15212269-C-A hg38:Y:13100355-C-A | BY100211 | ** | |||||
| hg19:Y:15260228-A-G hg38:Y:13148312-A-G | ** | ||||||
| hg19:Y:15315309-C-A hg38:Y:13203414-C-A | ** | ||||||
| hg19:Y:15410414-C-G hg38:Y:13298534-C-G | ** | ||||||
| hg19:Y:15417795-C-A hg38:Y:13305915-C-A | ** | ||||||
| hg19:Y:15426201-G-A hg38:Y:13314321-G-A | ** | ||||||
| hg19:Y:15429331-C-A hg38:Y:13317451-C-A | ** | ||||||
| hg19:Y:15476389-C-A hg38:Y:13364509-C-A | ** | ||||||
| hg19:Y:15515318-C-A hg38:Y:13403438-C-A | ** | ||||||
| hg19:Y:15607944-C-A hg38:Y:13496064-C-A | ** | ||||||
| hg19:Y:15623411-C-A hg38:Y:13511531-C-A | ** | ||||||
| hg19:Y:15623435-C-T hg38:Y:13511555-C-T | ** | ||||||
| hg19:Y:15844859-C-A hg38:Y:13732979-C-A | ** | ||||||
| hg19:Y:15866313-AAGG-A hg38:Y:13754433-AAGG-A | ** | ||||||
| hg19:Y:15911629-C-A hg38:Y:13799749-C-A | ** | ||||||
| hg19:Y:15995056-C-A hg38:Y:13883176-C-A | ** | ||||||
| hg19:Y:16006205-G-A hg38:Y:13894325-G-A | ** | ||||||
| hg19:Y:16032916-C-A hg38:Y:13921036-C-A | ** | ||||||
| hg19:Y:16056848-G-A hg38:Y:13944968-G-A | ** | ||||||
| hg19:Y:16342153-A-T hg38:Y:14230273-A-T | ** | ||||||
| hg19:Y:16342154-A-T hg38:Y:14230274-A-T | ** | ||||||
| hg19:Y:16342156-A-T hg38:Y:14230276-A-T | ** | ||||||
| hg19:Y:16342189-A-T hg38:Y:14230309-A-T | ** | ||||||
| hg19:Y:16364075-TATATATATA-T hg38:Y:14252195-TATATATATA-T | ** | ||||||
| hg19:Y:16364085-TA-T hg38:Y:14252205-TA-T | ** | ||||||
| hg19:Y:16364101-T-A hg38:Y:14252221-T-A | ** | ||||||
| hg19:Y:16520412-C-A hg38:Y:14408532-C-A | FT3109 | ** | |||||
| hg19:Y:16782194-C-A hg38:Y:14670314-C-A | ** | ||||||
| hg19:Y:16821901-A-G hg38:Y:14710021-A-G | ** | ||||||
| hg19:Y:16897536-CAG-C hg38:Y:14785656-CAG-C | ** | ||||||
| hg19:Y:16944937-AGG-A hg38:Y:14833057-AGG-A | ** | ||||||
| hg19:Y:16960117-TG-T hg38:Y:14848237-TG-T | ** | ||||||
| hg19:Y:17283832-C-A hg38:Y:15171952-C-A | ** | ||||||
| hg19:Y:17334113-A-G hg38:Y:15222233-A-G | ** | ||||||
| hg19:Y:17334118-G-A hg38:Y:15222238-G-A | ** | ||||||
| hg19:Y:17334120-T-C hg38:Y:15222240-T-C | ** | ||||||
| hg19:Y:17492861-C-A hg38:Y:15380981-C-A | ** | ||||||
| hg19:Y:17624503-CT-C hg38:Y:15512623-CT-C | ** | ||||||
| hg19:Y:17648198-G-A hg38:Y:15536318-G-A | ** | ||||||
| hg19:Y:17650350-C-A hg38:Y:15538470-C-A | ** | ||||||
| hg19:Y:17794352-T-C hg38:Y:15682472-T-C | ** | ||||||
| hg19:Y:17817843-G-A hg38:Y:15705963-G-A | ** | ||||||
| hg19:Y:18188231-T-A hg38:Y:16076351-T-A | ** | ||||||
| hg19:Y:18253153-C-T hg38:Y:16141273-C-T | ** | ||||||
| hg19:Y:18381866-C-A hg38:Y:16269986-C-A | P6_Gap | ** | |||||
| hg19:Y:18570025-T-C hg38:Y:16458145-T-C | ** | ||||||
| hg19:Y:18597956-C-A hg38:Y:16486076-C-A | ** | ||||||
| hg19:Y:18654700-C-A hg38:Y:16542820-C-A | ** | ||||||
| hg19:Y:18666169-T-C hg38:Y:16554289-T-C | ** | ||||||
| hg19:Y:18756905-C-A hg38:Y:16645025-C-A | ** | ||||||
| hg19:Y:18890461-CAACAAA-C hg38:Y:16778581-CAACAAA-C | ** | ||||||
| hg19:Y:18891352-C-A hg38:Y:16779472-C-A | ** | ||||||
| hg19:Y:18951765-C-A hg38:Y:16839885-C-A | ** | ||||||
| hg19:Y:18976717-C-A hg38:Y:16864837-C-A | ** | ||||||
| hg19:Y:19144129-T-C hg38:Y:17032249-T-C | ** | ||||||
| hg19:Y:19247696-C-A hg38:Y:17135816-C-A | ** | ||||||
| hg19:Y:19275277-G-A hg38:Y:17163397-G-A | ** | ||||||
| hg19:Y:19286478-G-T hg38:Y:17174598-G-T | ** | ||||||
| hg19:Y:19338235-G-A hg38:Y:17226355-G-A | ** | ||||||
| hg19:Y:19393398-G-A hg38:Y:17281518-G-A | ** | ||||||
| hg19:Y:19415359-A-T hg38:Y:17303479-A-T | ** | ||||||
| hg19:Y:19516925-C-A hg38:Y:17405045-C-A | ** | ||||||
| hg19:Y:20409551-C-A hg38:Y:18247665-C-A | P5_Dst | ** | |||||
| hg19:Y:21117039-C-A hg38:Y:18955153-C-A | ** | ||||||
| hg19:Y:21136772-T-A hg38:Y:18974886-T-A | ** | ||||||
| hg19:Y:21158976-G-A hg38:Y:18997090-G-A | ** | ||||||
| hg19:Y:21248804-A-G hg38:Y:19086918-A-G | ** | ||||||
| hg19:Y:21292929-C-A hg38:Y:19131043-C-A | ** | ||||||
| hg19:Y:21410277-G-T hg38:Y:19248391-G-T | ** | ||||||
| hg19:Y:21514135-A-T hg38:Y:19352249-A-T | ** | ||||||
| hg19:Y:21591407-C-A hg38:Y:19429521-C-A | ** | ||||||
| hg19:Y:21928669-C-A hg38:Y:19766783-C-A | ** | ||||||
| hg19:Y:21950694-C-A hg38:Y:19788808-C-A | ** | ||||||
| hg19:Y:22086000-C-A hg38:Y:19924114-C-A | ** | ||||||
| hg19:Y:22123167-C-A hg38:Y:19961281-C-A | ** | ||||||
| hg19:Y:22159683-C-A hg38:Y:19997797-C-A | ** | ||||||
| hg19:Y:22214886-T-G hg38:Y:20053000-T-G | ** | ||||||
| hg19:Y:22487770-G-A hg38:Y:20325884-G-A | DYZ19 | ** | |||||
| hg19:Y:22563059-C-A hg38:Y:20401173-C-A | ** | ||||||
| hg19:Y:22579907-C-A hg38:Y:20418021-C-A | BY139246 | ** | |||||
| hg19:Y:22611255-A-C hg38:Y:20449369-A-C | ** | ||||||
| hg19:Y:22712890-T-G hg38:Y:20551004-T-G | ** | ||||||
| hg19:Y:22791774-C-A hg38:Y:20629888-C-A | ** | ||||||
| hg19:Y:22857549-G-T hg38:Y:20695663-G-T | ** | ||||||
| hg19:Y:22864385-C-A hg38:Y:20702499-C-A | ** | ||||||
| hg19:Y:22938916-T-C hg38:Y:20777030-T-C | ** | ||||||
| hg19:Y:23157415-C-A hg38:Y:20995529-C-A | ** | ||||||
| hg19:Y:23234688-TTCTC-T hg38:Y:21072802-TTCTC-T | ** | ||||||
| hg19:Y:23578591-C-A hg38:Y:21416705-C-A | ** | ||||||
| hg19:Y:23648120-C-A hg38:Y:21486234-C-A | ** | ||||||
| hg19:Y:23818081-A-G hg38:Y:21656195-A-G | ** | ||||||
| hg19:Y:23847958-A-G hg38:Y:21686072-A-G | ** | ||||||
| hg19:Y:23853773-G-A hg38:Y:21691887-G-A | ** | ||||||
| hg19:Y:23856675-T-C hg38:Y:21694789-T-C | ** | ||||||
| hg19:Y:23865301-G-T hg38:Y:21703415-G-T | ** | ||||||
| hg19:Y:23981998-C-A hg38:Y:21835851-C-A | ** | ||||||
| hg19:Y:24003119-C-A hg38:Y:21856972-C-A | ** | ||||||
| hg19:Y:26024612-C-T hg38:Y:23878465-C-T | P1_Y1 | ** | |||||
| hg19:Y:27824514-T-G hg38:Y:25678367-T-G | P1_Y2 | ** | |||||
| hg19:Y:27860935-T-G hg38:Y:25714788-T-G | P1_Y2 | ** | |||||
| hg19:Y:27997753-T-A hg38:Y:25851606-T-A | P1_Y2 | ** | |||||
| hg19:Y:28429850-C-A hg38:Y:26283703-C-A | P1_gr2 | ** | |||||
| hg19:Y:28478326-G-A hg38:Y:26332179-G-A | ** | ||||||
| hg19:Y:28499968-G-A hg38:Y:26353821-G-A | ** | ||||||
| hg19:Y:28600887-C-A hg38:Y:26454740-C-A | ** | ||||||
| hg19:Y:28639641-G-T hg38:Y:26493494-G-T | ** | ||||||
| hg19:Y:28763510-C-CA hg38:Y:26617363-C-CA | ** | ||||||
| hg19:Y:28779098-A-G hg38:Y:26632951-A-G | ** | ||||||
| hg38:Y:56880146-C-A | ** | ||||||
| hg19:Y:13856332-G-A hg38:Y:11735626-G-A | DYZ17 | *** | |||||
| hg19:Y:7715717-A-C hg38:Y:7847676-A-C | F1050 M622 V1380 | *** | |||||
| hg19:Y:13482931-A-C hg38:Y:11327255-A-C | *** | ||||||
| hg19:Y:14102381-CT-C hg38:Y:11981675-CT-C | *** | ||||||
| hg19:Y:7542819-GA-G hg38:Y:7674778-GA-G | 10×A | *** | |||||
| hg19:Y:13478255-C-A hg38:Y:11322579-C-A | *** | ||||||
| hg19:Y:13478257-G-T hg38:Y:11322581-G-T | *** | ||||||
| hg19:Y:21477990-C-A hg38:Y:19316104-C-A | *** | ||||||
| hg38:Y:10926569-C-A,T | *** | ||||||
| hg19:Y:13453638-C-CAATCGAGTGG hg38:Y:11297962-C-CAATCGAGTGG | *** | ||||||
| hg38:Y:10943466-C-A | *** | ||||||
| hg19:Y:22810034-C-A hg38:Y:20648148-C-A | *** | ||||||
| hg19:Y:16633274-C-A hg38:Y:14521394-C-A | *** | ||||||
| hg19:Y:8874970-CT-C,CTT hg38:Y:9006929-CT-C,CTT | 17×T | *** | |||||
| hg19:Y:15160798-C-A hg38:Y:13048884-C-A | *** | ||||||
| hg19:Y:16505918-TAA-T,TAAA hg38:Y:14394038-TAA-T,TAAA | 12×A | *** | |||||
| hg38:Y:10985097-T-C | *** | ||||||
| hg38:Y:10839759-G-T | *** | ||||||
| hg38:Y:10839769-C-T | *** | ||||||
| hg19:Y:13856345-A-G hg38:Y:11735639-A-G | DYZ17 | *** | |||||
| hg19:Y:16244792-GGTGTGTGT-G,GGTGT hg38:Y:14132912-GGTGTGTGT-G,GGTGT | 16×GT | *** | |||||
| hg38:Y:10653719-C-A | *** | ||||||
| hg19:Y:22038858-C-A hg38:Y:19876972-C-A | *** | ||||||
| hg38:Y:10943420-C-A | *** | ||||||
| hg19:Y:7418073-CAAAAAAA-C hg38:Y:7550032-CAAAAAAA-C | 22×A | *** | |||||
| hg19:Y:23096812-C-A hg38:Y:20934926-C-A | *** | ||||||
| hg19:Y:23292130-ATT-A hg38:Y:21130244-ATT-A | 13×T | *** | |||||
| hg19:Y:21093365-C-A hg38:Y:18931479-C-A | *** | ||||||
| hg19:Y:8515192-C-A hg38:Y:8647151-C-A | *** | ||||||
| hg19:Y:18083806-C-A hg38:Y:15971926-C-A | *** | ||||||
| hg19:Y:22786906-C-A hg38:Y:20625020-C-A | *** | ||||||
| hg38:Y:10824114-C-A | *** | ||||||
| hg19:Y:28589751-C-A hg38:Y:26443604-C-A | *** | ||||||
| hg19:Y:23484497-C-A hg38:Y:21322611-C-A | *** | ||||||
| hg38:Y:10797719-A-C,T | *** | ||||||
| hg38:Y:10687996-A-T | *** | ||||||
| hg19:Y:24434616-G-T hg38:Y:22288469-G-T | *** | ||||||
| hg19:Y:2654158-C-A hg38:Y:2786117-C-A | *** | ||||||
| hg19:Y:2767147-C-A hg38:Y:2899106-C-A | *** | ||||||
| hg19:Y:4872785-C-A hg38:Y:5004744-C-A | *** | ||||||
| hg19:Y:4898299-A-G hg38:Y:5030258-A-G | *** | ||||||
| hg19:Y:6817905-C-A hg38:Y:6949864-C-A | *** | ||||||
| hg19:Y:6921795-C-A hg38:Y:7053754-C-A | *** | ||||||
| hg19:Y:6981597-C-A hg38:Y:7113556-C-A | *** | ||||||
| hg19:Y:7292453-C-A hg38:Y:7424412-C-A | *** | ||||||
| hg19:Y:7512404-C-A hg38:Y:7644363-C-A | *** | ||||||
| hg19:Y:7853617-C-A hg38:Y:7985576-C-A | *** | ||||||
| hg19:Y:7940000-C-T hg38:Y:8071959-C-T | *** | ||||||
| hg19:Y:8096766-C-A hg38:Y:8228725-C-A | *** | ||||||
| hg19:Y:8261084-G-A hg38:Y:8393043-G-A | *** | ||||||
| hg19:Y:8636122-G-T hg38:Y:8768081-G-T | *** | ||||||
| hg19:Y:8689722-T-C hg38:Y:8821681-T-C | *** | ||||||
| hg19:Y:9457745-A-T hg38:Y:9620136-A-T | *** | ||||||
| hg19:Y:9880471-A-G hg38:Y:10042862-A-G | *** | ||||||
| hg19:Y:9881188-C-A hg38:Y:10043579-C-A | *** | ||||||
| hg38:Y:10839746-C-A | *** | ||||||
| hg38:Y:10839763-A-T | *** | ||||||
| hg38:Y:10839774-C-T | FT433572 | *** | |||||
| hg19:Y:13461997-T-C hg38:Y:11306321-T-C | *** | ||||||
| hg19:Y:14092126-C-G hg38:Y:11971420-C-G | *** | ||||||
| hg19:Y:14180825-G-A hg38:Y:12060119-G-A | *** | ||||||
| hg19:Y:14318662-C-A hg38:Y:12197956-C-A | *** | ||||||
| hg19:Y:14373935-T-C hg38:Y:12253231-T-C | *** | ||||||
| hg19:Y:14411242-A-G hg38:Y:12290539-A-G | *** | ||||||
| hg19:Y:14411260-C-A hg38:Y:12290557-C-A | *** | ||||||
| hg19:Y:14591887-C-A hg38:Y:12480087-C-A | *** | ||||||
| hg19:Y:14787423-C-A hg38:Y:12675493-C-A | *** | ||||||
| hg19:Y:14822448-C-A hg38:Y:12710515-C-A | *** | ||||||
| hg19:Y:15567151-C-A hg38:Y:13455271-C-A | *** | ||||||
| hg19:Y:16478321-C-A hg38:Y:14366441-C-A | *** | ||||||
| hg19:Y:16515570-AAAAT-A hg38:Y:14403690-AAAAT-A | *** | ||||||
| hg19:Y:16735410-C-A hg38:Y:14623530-C-A | *** | ||||||
| hg19:Y:16834328-C-A hg38:Y:14722448-C-A | *** | ||||||
| hg19:Y:17040704-C-A hg38:Y:14928824-C-A | *** | ||||||
| hg19:Y:17129928-C-A hg38:Y:15018048-C-A | *** | ||||||
| hg19:Y:17208358-C-A hg38:Y:15096478-C-A | *** | ||||||
| hg19:Y:17425333-C-A hg38:Y:15313453-C-A | *** | ||||||
| hg19:Y:18072905-C-A hg38:Y:15961025-C-A | *** | ||||||
| hg19:Y:18127352-C-A hg38:Y:16015472-C-A | *** | ||||||
| hg19:Y:18161167-C-A hg38:Y:16049287-C-A | *** | ||||||
| hg19:Y:18593997-C-A hg38:Y:16482117-C-A | *** | ||||||
| hg19:Y:18693812-A-G hg38:Y:16581932-A-G | *** | ||||||
| hg19:Y:19263137-C-A hg38:Y:17151257-C-A | *** | ||||||
| hg19:Y:20379735-G-T hg38:Y:18217849-G-T | P5_Dst | *** | |||||
| hg19:Y:20723305-G-T hg38:Y:18561419-G-T | P4_Prx | *** | |||||
| hg19:Y:21031362-C-A hg38:Y:18869476-C-A | P4_Dst | *** | |||||
| hg19:Y:21092842-C-A hg38:Y:18930956-C-A | *** | ||||||
| hg19:Y:21211511-AGGCACT-A hg38:Y:19049625-AGGCACT-A | *** | ||||||
| hg19:Y:21233502-C-A hg38:Y:19071616-C-A | *** | ||||||
| hg19:Y:21341739-T-C hg38:Y:19179853-T-C | *** | ||||||
| hg19:Y:21364567-T-G hg38:Y:19202681-T-G | *** | ||||||
| hg19:Y:21426844-C-A hg38:Y:19264958-C-A | *** | ||||||
| hg19:Y:21505463-C-A hg38:Y:19343577-C-A | *** | ||||||
| hg19:Y:22581029-C-A hg38:Y:20419143-C-A | *** | ||||||
| hg19:Y:22650594-C-A hg38:Y:20488708-C-A | *** | ||||||
| hg19:Y:23022901-T-C hg38:Y:20861015-T-C | *** | ||||||
| hg19:Y:23045055-C-A hg38:Y:20883169-C-A | *** | ||||||
| hg19:Y:23138045-C-A hg38:Y:20976159-C-A | *** | ||||||
| hg19:Y:23188819-G-A hg38:Y:21026933-G-A | *** | ||||||
| hg19:Y:23257735-C-A hg38:Y:21095849-C-A | *** | ||||||
| hg19:Y:23470789-A-G hg38:Y:21308903-A-G | *** | ||||||
| hg19:Y:23534326-A-G hg38:Y:21372440-A-G | FT26689 | *** | |||||
| hg19:Y:23554746-TA-T hg38:Y:21392860-TA-T | *** | ||||||
| hg19:Y:23822099-C-A hg38:Y:21660213-C-A | *** | ||||||
| hg38:Y:21750897-T-C | *** | ||||||
| hg19:Y:23982563-G-T hg38:Y:21836416-G-T | *** | ||||||
| hg19:Y:24397622-G-T hg38:Y:22251475-G-T | *** | ||||||
| hg19:Y:28608945-C-A hg38:Y:26462798-C-A | *** | ||||||
| hg38:Y:56835277-C-A | *** | ||||||
| hg38:Y2:16764-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 573885 | 8420190 | 6904903 | 6864211 |
| Used in age calculations | 8420190 | 6904903 | 6864211 |
| Counts of SNPs | 6 | 5 |
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