McLean
BigY2: 311069MDKA Birth:
ScotlandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 311069 |
|---|---|---|---|---|---|---|---|
| hg19:Y:5644813-G-GTA hg38:Y:5776772-G-GTA | A* | ||||||
| hg19:Y:26112442-G-C hg38:Y:23966295-G-C | P1_Y1 | A* | |||||
| hg19:Y:20680549-A-G hg38:Y:18518663-A-G | P4_Prx | A* | |||||
| hg19:Y:17872301-C-T hg38:Y:15760421-C-T | BY3503 | FGC32882 | Y | Y | + | ||
| hg19:Y:8847247-GA-G hg38:Y:8979206-GA-G | 10×A | + | |||||
| hg19:Y:9796136-T-C hg38:Y:9958527-T-C | FGC32876 | Y | + | ||||
| hg19:Y:14170875-G-A hg38:Y:12050169-G-A | FGC32877 | Y | Y | + | |||
| hg19:Y:15915495-T-C hg38:Y:13803615-T-C | FGC32878 | Y | Y | + | |||
| hg19:Y:17663760-T-A hg38:Y:15551880-T-A | FGC32880 | Y | Y | + | |||
| hg19:Y:17854203-T-C hg38:Y:15742323-T-C | FGC32881 | Y | Y | + | |||
| hg19:Y:17982564-C-T hg38:Y:15870684-C-T | FGC32883 | Y | + | ||||
| hg19:Y:22556493-A-C hg38:Y:20394607-A-C | FGC32884 | Y | Y | + | |||
| hg19:Y:23624308-G-T hg38:Y:21462422-G-T | FGC32885 | Y | Y | + | |||
| hg19:Y:22346507-C-T hg38:Y:20184621-C-T | DYZ19 | * | |||||
| hg19:Y:7717737-CTTCTTTCT-C hg38:Y:7849696-CTTCTTTCT-C | 13×TTCT | ** | |||||
| hg19:Y:22869620-C-A hg38:Y:20707734-C-A | FTB4374 | ** | |||||
| hg19:Y:7113827-AAAT-A hg38:Y:7245786-AAAT-A | 5×AAT | ** | |||||
| hg19:Y:9952428-C-A hg38:Y:10114819-C-A | ** | ||||||
| hg19:Y:24422558-C-T hg38:Y:22276411-C-T | FGC10554 | ** | |||||
| hg19:Y:2986025-A-G hg38:Y:3117984-A-G | ** | ||||||
| hg19:Y:14933477-C-A hg38:Y:12821542-C-A | ** | ||||||
| hg19:Y:3092031-A-C hg38:Y:3223990-A-C | ** | ||||||
| hg19:Y:19505154-C-A hg38:Y:17393274-C-A | ** | ||||||
| hg38:Y:10754921-C-A | ** | ||||||
| hg19:Y:15926798-C-A hg38:Y:13814918-C-A | ** | ||||||
| hg38:Y:11671151-C-A | DYZ17 | ** | |||||
| hg19:Y:22068725-C-A hg38:Y:19906839-C-A | ** | ||||||
| hg19:Y:2746052-G-A hg38:Y:2878011-G-A | ** | ||||||
| hg19:Y:9221669-A-T hg38:Y:9384060-A-T | ** | ||||||
| hg19:Y:14424990-T-C hg38:Y:12304265-T-C | ** | ||||||
| hg19:Y:18039366-ATTTTTTT-A hg38:Y:15927486-ATTTTTTT-A | 30×T | ** | |||||
| hg19:Y:16926719-G-A hg38:Y:14814839-G-A | ** | ||||||
| hg19:Y:14023158-C-A hg38:Y:11902452-C-A | ** | ||||||
| hg19:Y:16612594-C-A hg38:Y:14500714-C-A | ** | ||||||
| hg19:Y:13463469-C-A hg38:Y:11307793-C-A | ** | ||||||
| hg19:Y:14035141-C-A hg38:Y:11914435-C-A | ** | ||||||
| hg38:Y:10759391-T-A | ** | ||||||
| hg19:Y:28505174-C-A hg38:Y:26359027-C-A | ** | ||||||
| hg38:Y:10974820-C-A | ** | ||||||
| hg19:Y:16971409-C-A hg38:Y:14859529-C-A | ** | ||||||
| hg38:Y:10969964-C-CT | ** | ||||||
| hg19:Y:13920897-C-A hg38:Y:11800191-C-A | ** | ||||||
| hg19:Y:14579426-C-A hg38:Y:12467626-C-A | ** | ||||||
| hg19:Y:23082143-G-A hg38:Y:20920257-G-A | ** | ||||||
| hg19:Y:15179405-C-A hg38:Y:13067491-C-A | ** | ||||||
| hg38:Y:10935366-G-C | ** | ||||||
| hg19:Y:17449347-C-A hg38:Y:15337467-C-A | ** | ||||||
| hg19:Y:5199688-C-A hg38:Y:5331647-C-A | ** | ||||||
| hg19:Y:28062625-T-G hg38:Y:25916478-T-G | P1_Y2 | ** | |||||
| hg19:Y:22851371-CT-C hg38:Y:20689485-CT-C | 8×T | ** | |||||
| hg19:Y:21248503-C-A hg38:Y:19086617-C-A | ** | ||||||
| hg19:Y:7108595-C-A hg38:Y:7240554-C-A | ** | ||||||
| hg19:Y:28764992-C-A hg38:Y:26618845-C-A | ** | ||||||
| hg19:Y:16179616-C-A hg38:Y:14067736-C-A | ** | ||||||
| hg38:Y:10821953-A-T | ** | ||||||
| hg19:Y:15368823-C-A hg38:Y:13256943-C-A | ** | ||||||
| hg19:Y:28730012-C-A hg38:Y:26583865-C-A | ** | ||||||
| hg19:Y:14743171-AAAG-A hg38:Y:12631239-AAAG-A | ** | ||||||
| hg19:Y:23193206-G-T hg38:Y:21031320-G-T | ** | ||||||
| hg38:Y:11009320-C-A | ** | ||||||
| hg19:Y:14328097-C-A hg38:Y:12207391-C-A | ** | ||||||
| hg19:Y:16904664-C-A hg38:Y:14792784-C-A | FTB45743 | 40×A | ** | ||||
| hg19:Y:13271592-C-A hg38:Y:11115916-C-A | ** | ||||||
| hg19:Y:7633159-C-A hg38:Y:7765118-C-A | ** | ||||||
| hg38:Y:10744521-T-C | ** | ||||||
| hg19:Y:22816176-A-C hg38:Y:20654290-A-C | ** | ||||||
| hg19:Y:17285052-C-A hg38:Y:15173172-C-A | ** | ||||||
| hg19:Y:19059839-C-T hg38:Y:16947959-C-T | ** | ||||||
| hg19:Y:4241943-C-A hg38:Y:4373902-C-A | ** | ||||||
| hg19:Y:14107003-C-A hg38:Y:11986297-C-A | FGC42817 | ** | |||||
| hg19:Y:22199446-C-A hg38:Y:20037560-C-A | ** | ||||||
| hg38:Y:10958663-T-A | ** | ||||||
| hg19:Y:15221825-C-A hg38:Y:13109911-C-A | ** | ||||||
| hg19:Y:16952858-C-A hg38:Y:14840978-C-A | ** | ||||||
| hg19:Y:4918284-C-A hg38:Y:5050243-C-A | ** | ||||||
| hg38:Y:10998617-C-A | ** | ||||||
| hg38:Y:11034905-T-G | ** | ||||||
| hg19:Y:7259099-C-A hg38:Y:7391058-C-A | ** | ||||||
| hg19:Y:4064080-C-A hg38:Y:4196039-C-A | ** | ||||||
| hg19:Y:7629887-C-A hg38:Y:7761846-C-A | ** | ||||||
| hg38:Y:10935357-T-C | ** | ||||||
| hg19:Y:16170442-C-A hg38:Y:14058562-C-A | ** | ||||||
| hg19:Y:13621134-C-A hg38:Y:11465458-C-A | ** | ||||||
| hg38:Y:10992264-T-C | ** | ||||||
| hg38:Y:10983944-C-A | ** | ||||||
| hg19:Y:6461474-C-A hg38:Y:6593433-C-A | ** | ||||||
| hg19:Y:7923727-C-T hg38:Y:8055686-C-T | ** | ||||||
| hg19:Y:4521628-A-G hg38:Y:4653587-A-G | ** | ||||||
| hg19:Y:9942174-T-A hg38:Y:10104565-T-A | ** | ||||||
| hg19:Y:4388029-T-C hg38:Y:4519988-T-C | ** | ||||||
| hg38:Y:10759944-G-A | FT429991 | ** | |||||
| hg19:Y:7132752-G-T hg38:Y:7264711-G-T | ** | ||||||
| hg19:Y:13330923-C-A hg38:Y:11175247-C-A | ** | ||||||
| hg19:Y:22857806-C-A hg38:Y:20695920-C-A | ** | ||||||
| hg19:Y:3491929-C-A hg38:Y:3623888-C-A | ** | ||||||
| hg19:Y:13928828-T-C hg38:Y:11808122-T-C | ** | ||||||
| hg19:Y:17385348-TG-T hg38:Y:15273468-TG-T | ** | ||||||
| hg19:Y:17385358-A-ATC hg38:Y:15273478-A-ATC | ** | ||||||
| hg19:Y:17385368-G-C hg38:Y:15273488-G-C | ** | ||||||
| hg19:Y:17385369-A-C hg38:Y:15273489-A-C | ** | ||||||
| hg19:Y:14451236-A-AT hg38:Y:12330509-A-AT | ** | ||||||
| hg38:Y:10924381-C-T | ** | ||||||
| hg38:Y:10850751-T-A | ** | ||||||
| hg38:Y:10850760-A-C | ** | ||||||
| hg19:Y:14694797-C-A hg38:Y:12582863-C-A | ** | ||||||
| hg19:Y:13512095-G-T hg38:Y:11356419-G-T | FT444588 | ** | |||||
| hg19:Y:15127070-C-A hg38:Y:13015157-C-A | ** | ||||||
| hg19:Y:16007271-C-A hg38:Y:13895391-C-A | ** | ||||||
| hg19:Y:9942160-C-A hg38:Y:10104551-C-A | ** | ||||||
| hg19:Y:16550976-C-A hg38:Y:14439096-C-A | ** | ||||||
| hg38:Y:11677783-G-T | FGC81425 | DYZ17 | ** | ||||
| hg19:Y:28759749-C-A hg38:Y:26613602-C-A | ** | ||||||
| hg19:Y:3850144-C-A hg38:Y:3982103-C-A | ** | ||||||
| hg19:Y:4302518-G-T hg38:Y:4434477-G-T | ** | ||||||
| hg19:Y:18241907-C-A hg38:Y:16130027-C-A | ** | ||||||
| hg19:Y:19059817-C-T hg38:Y:16947937-C-T | ** | ||||||
| hg19:Y:15127082-C-A hg38:Y:13015169-C-A | ** | ||||||
| hg19:Y:4078500-G-T hg38:Y:4210459-G-T | ** | ||||||
| hg19:Y:16277949-C-A hg38:Y:14166069-C-A | ** | ||||||
| hg38:Y:10924362-C-T | ** | ||||||
| hg19:Y:4215929-G-T hg38:Y:4347888-G-T | ** | ||||||
| hg38:Y:10685301-G-T | ** | ||||||
| hg19:Y:16932158-C-A hg38:Y:14820278-C-A | ** | ||||||
| hg19:Y:22868826-C-A hg38:Y:20706940-C-A | ** | ||||||
| hg19:Y:6654202-C-A hg38:Y:6786161-C-A | ** | ||||||
| hg38:Y:10911407-C-A | ** | ||||||
| hg38:Y:10992350-C-T | ** | ||||||
| hg38:Y:10924386-CCA-C | ** | ||||||
| hg38:Y:10924392-T-TCC | ** | ||||||
| hg38:Y:10924403-A-C | ** | ||||||
| hg38:Y:10924408-A-G | ** | ||||||
| hg19:Y:13927080-C-A hg38:Y:11806374-C-A | ** | ||||||
| hg19:Y:15623404-T-C hg38:Y:13511524-T-C | ** | ||||||
| hg19:Y:14689106-C-A hg38:Y:12577172-C-A | ** | ||||||
| hg19:Y:6191121-A-G hg38:Y:6323080-A-G | IR3_Dst | ** | |||||
| hg19:Y:14270728-C-A hg38:Y:12150022-C-A | ** | ||||||
| hg19:Y:8855332-C-A hg38:Y:8987291-C-A | ** | ||||||
| hg19:Y:14461320-C-A hg38:Y:12340593-C-A | ** | ||||||
| hg19:Y:15011765-T-C hg38:Y:12899853-T-C | ** | ||||||
| hg19:Y:15844837-C-A hg38:Y:13732957-C-A | ** | ||||||
| hg19:Y:18270365-G-A hg38:Y:16158485-G-A | ** | ||||||
| hg19:Y:18270390-G-A hg38:Y:16158510-G-A | ** | ||||||
| hg19:Y:8181214-G-TTTT hg38:Y:8313173-G-TTTT | ** | ||||||
| hg19:Y:5458650-C-A hg38:Y:5590609-C-A | ** | ||||||
| hg19:Y:16267264-C-A hg38:Y:14155384-C-A | ** | ||||||
| hg38:Y:10902997-C-A | ** | ||||||
| hg19:Y:15221912-A-G hg38:Y:13109998-A-G | ** | ||||||
| hg19:Y:15967608-C-A hg38:Y:13855728-C-A | ** | ||||||
| hg38:Y:10937415-C-T | ** | ||||||
| hg19:Y:15218604-G-A hg38:Y:13106690-G-A | ** | ||||||
| hg38:Y:10772676-C-A | ** | ||||||
| hg19:Y:17385332-C-T hg38:Y:15273452-C-T | ** | ||||||
| hg38:Y:10671068-C-A | ** | ||||||
| hg19:Y:4840687-C-A hg38:Y:4972646-C-A | ** | ||||||
| hg19:Y:7100954-CTTTTTTT-C hg38:Y:7232913-CTTTTTTT-C | 32×T | ** | |||||
| hg19:Y:6102249-C-A hg38:Y:6234208-C-A | ** | ||||||
| hg19:Y:20101789-C-A hg38:Y:17989909-C-A | P5_Dst | ** | |||||
| hg19:Y:15041091-T-C hg38:Y:12929181-T-C | ** | ||||||
| hg19:Y:23046030-G-T hg38:Y:20884144-G-T | ** | ||||||
| hg19:Y:5830195-C-A hg38:Y:5962154-C-A | ** | ||||||
| hg19:Y:23434375-C-A hg38:Y:21272489-C-A | ** | ||||||
| hg19:Y:22816177-G-A hg38:Y:20654291-G-A | ** | ||||||
| hg19:Y:7425140-C-A hg38:Y:7557099-C-A | ** | ||||||
| hg19:Y:6347628-C-A hg38:Y:6479587-C-A | ** | ||||||
| hg19:Y:19059818-A-G hg38:Y:16947938-A-G | ** | ||||||
| hg19:Y:19059821-C-T hg38:Y:16947941-C-T | ** | ||||||
| hg19:Y:17775171-T-C hg38:Y:15663291-T-C | ** | ||||||
| hg38:Y:10937396-A-C | ** | ||||||
| hg38:Y:10937466-A-G | ** | ||||||
| hg19:Y:17545533-A-AG hg38:Y:15433653-A-AG | ** | ||||||
| hg19:Y:22827471-T-TA hg38:Y:20665585-T-TA | ** | ||||||
| hg38:Y:10900132-C-A | ** | ||||||
| hg38:Y:10651656-G-T | ** | ||||||
| hg38:Y:10967798-C-A | ** | ||||||
| hg38:Y:11020242-C-A | ** | ||||||
| hg19:Y:14184277-C-A hg38:Y:12063571-C-A | ** | ||||||
| hg19:Y:15127832-T-C hg38:Y:13015919-T-C | ** | ||||||
| hg19:Y:16636015-G-A hg38:Y:14524135-G-A | ** | ||||||
| hg38:Y:10780268-G-T | ** | ||||||
| hg19:Y:14720345-A-G hg38:Y:12608413-A-G | ** | ||||||
| hg19:Y:23563880-C-A hg38:Y:21401994-C-A | ** | ||||||
| hg38:Y:11653047-C-A | DYZ17 | ** | |||||
| hg19:Y:14926229-C-A hg38:Y:12814294-C-A | ** | ||||||
| hg38:Y:10659662-A-T | ** | ||||||
| hg19:Y:15729137-C-A hg38:Y:13617257-C-A | ** | ||||||
| hg19:Y:19304324-C-A hg38:Y:17192444-C-A | ** | ||||||
| hg38:Y:10757352-C-A | ** | ||||||
| hg19:Y:2693312-T-C hg38:Y:2825271-T-C | ** | ||||||
| hg19:Y:2767832-A-C hg38:Y:2899791-A-C | ** | ||||||
| hg19:Y:2881299-C-A hg38:Y:3013258-C-A | ** | ||||||
| hg19:Y:2885509-C-A hg38:Y:3017468-C-A | ** | ||||||
| hg19:Y:2979220-T-G hg38:Y:3111179-T-G | ** | ||||||
| hg19:Y:3271526-C-T hg38:Y:3403485-C-T | ** | ||||||
| hg19:Y:3578809-G-T hg38:Y:3710768-G-T | ** | ||||||
| hg19:Y:3814882-G-T hg38:Y:3946841-G-T | ** | ||||||
| hg19:Y:3849117-C-A hg38:Y:3981076-C-A | ** | ||||||
| hg19:Y:4077612-TAATGTTG-T hg38:Y:4209571-TAATGTTG-T | ** | ||||||
| hg19:Y:4178840-C-A hg38:Y:4310799-C-A | ** | ||||||
| hg19:Y:4187437-T-C hg38:Y:4319396-T-C | ** | ||||||
| hg19:Y:4434052-T-C hg38:Y:4566011-T-C | ** | ||||||
| hg19:Y:4959979-A-C hg38:Y:5091938-A-C | ** | ||||||
| hg19:Y:5148507-A-G hg38:Y:5280466-A-G | ** | ||||||
| hg19:Y:5194538-G-T hg38:Y:5326497-G-T | ** | ||||||
| hg19:Y:5336840-A-C hg38:Y:5468799-A-C | ** | ||||||
| hg19:Y:5421028-T-C hg38:Y:5552987-T-C | ** | ||||||
| hg19:Y:5562416-A-G hg38:Y:5694375-A-G | ** | ||||||
| hg19:Y:5782437-C-A hg38:Y:5914396-C-A | ** | ||||||
| hg19:Y:5853591-C-A hg38:Y:5985550-C-A | ** | ||||||
| hg19:Y:5937678-C-CATATATAT hg38:Y:6069637-C-CATATATAT | ** | ||||||
| hg19:Y:6423690-C-A hg38:Y:6555649-C-A | ** | ||||||
| hg19:Y:6512118-C-A hg38:Y:6644077-C-A | ** | ||||||
| hg19:Y:6512134-G-A hg38:Y:6644093-G-A | ** | ||||||
| hg19:Y:6790245-C-A hg38:Y:6922204-C-A | ** | ||||||
| hg19:Y:7003807-A-G hg38:Y:7135766-A-G | ** | ||||||
| hg19:Y:7020693-A-G hg38:Y:7152652-A-G | ** | ||||||
| hg19:Y:7221510-T-C hg38:Y:7353469-T-C | ** | ||||||
| hg19:Y:7237878-G-C hg38:Y:7369837-G-C | ** | ||||||
| hg19:Y:7243755-A-G hg38:Y:7375714-A-G | ** | ||||||
| hg19:Y:7319274-T-A hg38:Y:7451233-T-A | ** | ||||||
| hg19:Y:7384703-T-G hg38:Y:7516662-T-G | ** | ||||||
| hg19:Y:7384752-T-A hg38:Y:7516711-T-A | ** | ||||||
| hg19:Y:7451190-C-A hg38:Y:7583149-C-A | IR1_L | ** | |||||
| hg19:Y:7534441-A-T hg38:Y:7666400-A-T | ** | ||||||
| hg19:Y:7534599-AC-A hg38:Y:7666558-AC-A | ** | ||||||
| hg19:Y:7774143-G-A hg38:Y:7906102-G-A | ** | ||||||
| hg19:Y:7869118-CTAA-C hg38:Y:8001077-CTAA-C | ** | ||||||
| hg19:Y:8697617-C-A hg38:Y:8829576-C-A | ** | ||||||
| hg19:Y:8731061-C-A hg38:Y:8863020-C-A | ** | ||||||
| hg19:Y:8741683-C-T hg38:Y:8873642-C-T | ** | ||||||
| hg19:Y:8751597-C-A hg38:Y:8883556-C-A | ** | ||||||
| hg19:Y:8790187-G-C hg38:Y:8922146-G-C | ** | ||||||
| hg19:Y:8790191-T-C hg38:Y:8922150-T-C | ** | ||||||
| hg19:Y:8790192-G-A hg38:Y:8922151-G-A | ** | ||||||
| hg19:Y:8807137-T-G hg38:Y:8939096-T-G | ** | ||||||
| hg19:Y:8816305-G-T hg38:Y:8948264-G-T | ** | ||||||
| hg38:Y:9056048-C-A | ** | ||||||
| hg19:Y:8971318-T-C hg38:Y:9133709-T-C | ** | ||||||
| hg19:Y:9015850-C-A hg38:Y:9178241-C-A | ** | ||||||
| hg19:Y:9925290-T-G hg38:Y:10087681-T-G | ** | ||||||
| hg19:Y:9938533-T-C hg38:Y:10100924-T-C | ** | ||||||
| hg19:Y:9986230-C-A hg38:Y:10148621-C-A | ** | ||||||
| hg19:Y:10003631-C-A hg38:Y:10166022-C-A | ** | ||||||
| hg19:Y:10034291-G-C hg38:Y:10196682-G-C | ** | ||||||
| hg38:Y:10651609-T-TTCC | ** | ||||||
| hg38:Y:10651614-T-TG | ** | ||||||
| hg38:Y:10651658-A-ATAAT | ** | ||||||
| hg38:Y:10685163-A-G | ** | ||||||
| hg38:Y:10691143-A-G | ** | ||||||
| hg38:Y:10744853-C-A | ** | ||||||
| hg38:Y:10776451-C-A | ** | ||||||
| hg38:Y:10787040-T-G | ** | ||||||
| hg38:Y:10814417-C-G | ** | ||||||
| hg38:Y:10834333-G-C | ** | ||||||
| hg38:Y:10834340-C-T | ** | ||||||
| hg38:Y:10837984-A-T | ** | ||||||
| hg38:Y:10850753-T-A | ** | ||||||
| hg38:Y:10862048-T-C | ** | ||||||
| hg38:Y:10894499-TC-T | ** | ||||||
| hg38:Y:10894504-TCTAC-T | ** | ||||||
| hg38:Y:10894517-T-G | ** | ||||||
| hg38:Y:10894682-A-G | ** | ||||||
| hg38:Y:10894767-T-C | ** | ||||||
| hg38:Y:10932158-C-A | ** | ||||||
| hg38:Y:10938316-C-A | ** | ||||||
| hg38:Y:10940605-G-A | ** | ||||||
| hg38:Y:10940647-T-A | ** | ||||||
| hg38:Y:10940669-T-TC | ** | ||||||
| hg38:Y:10954261-C-A | ** | ||||||
| hg38:Y:10971163-T-G | ** | ||||||
| hg38:Y:10992278-CTCCACTCCA-C | ** | ||||||
| hg38:Y:10995498-C-T | ** | ||||||
| hg38:Y:11006410-A-G | ** | ||||||
| hg38:Y:11007342-C-A | ** | ||||||
| hg38:Y:11009443-A-G | ** | ||||||
| hg38:Y:11011228-C-A | ** | ||||||
| hg38:Y:11037417-C-A | ** | ||||||
| hg19:Y:13198681-G-T hg38:Y:11043005-G-T | ** | ||||||
| hg19:Y:13302518-T-C hg38:Y:11146842-T-C | ** | ||||||
| hg19:Y:13305476-C-A hg38:Y:11149800-C-A | ** | ||||||
| hg19:Y:13306961-G-T hg38:Y:11151285-G-T | ** | ||||||
| hg19:Y:13306965-T-G hg38:Y:11151289-T-G | ** | ||||||
| hg19:Y:13347857-G-T hg38:Y:11192181-G-T | ** | ||||||
| hg19:Y:13505054-T-C hg38:Y:11349378-T-C | ** | ||||||
| hg19:Y:13520526-G-A hg38:Y:11364850-G-A | ** | ||||||
| hg19:Y:13520539-A-C hg38:Y:11364863-A-C | ** | ||||||
| hg19:Y:13520544-A-G hg38:Y:11364868-A-G | ** | ||||||
| hg19:Y:13585083-A-T hg38:Y:11429407-A-T | ** | ||||||
| hg19:Y:13624802-C-A hg38:Y:11469126-C-A | ** | ||||||
| hg19:Y:13633889-T-G hg38:Y:11478213-T-G | ** | ||||||
| hg38:Y:11657514-A-G | DYZ17 | ** | |||||
| hg38:Y:11669396-G-A | DYZ17 | ** | |||||
| hg38:Y:11677251-G-C | DYZ17 | ** | |||||
| hg19:Y:13910085-C-A hg38:Y:11789379-C-A | ** | ||||||
| hg19:Y:13926992-A-C hg38:Y:11806286-A-C | ** | ||||||
| hg19:Y:13937200-G-T hg38:Y:11816494-G-T | ** | ||||||
| hg19:Y:13943151-C-A hg38:Y:11822445-C-A | ** | ||||||
| hg19:Y:13947041-C-A hg38:Y:11826335-C-A | ** | ||||||
| hg19:Y:14017573-A-G hg38:Y:11896867-A-G | ** | ||||||
| hg19:Y:14073152-G-T hg38:Y:11952446-G-T | ** | ||||||
| hg19:Y:14183171-C-A hg38:Y:12062465-C-A | ** | ||||||
| hg19:Y:14219720-A-G hg38:Y:12099014-A-G | ** | ||||||
| hg19:Y:14255791-T-A hg38:Y:12135085-T-A | ** | ||||||
| hg19:Y:14424964-A-G hg38:Y:12304239-A-G | ** | ||||||
| hg19:Y:14424974-TCT-C hg38:Y:12304249-TCT-C | ** | ||||||
| hg19:Y:14424991-G-A hg38:Y:12304266-G-A | ** | ||||||
| hg19:Y:14425003-G-A hg38:Y:12304278-G-A | ** | ||||||
| hg19:Y:14446686-T-C hg38:Y:12325959-T-C | ** | ||||||
| hg19:Y:14449897-A-G hg38:Y:12329170-A-G | ** | ||||||
| hg19:Y:14451233-T-TA hg38:Y:12330506-T-TA | ** | ||||||
| hg19:Y:14451251-A-G hg38:Y:12330524-A-G | ** | ||||||
| hg19:Y:14451258-T-C hg38:Y:12330531-T-C | ** | ||||||
| hg19:Y:14451259-G-A hg38:Y:12330532-G-A | ** | ||||||
| hg19:Y:14451267-G-A hg38:Y:12330540-G-A | ** | ||||||
| hg19:Y:14526702-C-A hg38:Y:12414903-C-A | ** | ||||||
| hg19:Y:14578425-C-A hg38:Y:12466625-C-A | ** | ||||||
| hg19:Y:14589523-C-A hg38:Y:12477723-C-A | ** | ||||||
| hg19:Y:14673591-C-A hg38:Y:12561657-C-A | ** | ||||||
| hg19:Y:14711810-A-G hg38:Y:12599877-A-G | ** | ||||||
| hg19:Y:14798507-C-A hg38:Y:12686578-C-A | ** | ||||||
| hg19:Y:14911772-C-T hg38:Y:12799839-C-T | ** | ||||||
| hg19:Y:14986522-G-T hg38:Y:12874590-G-T | ** | ||||||
| hg19:Y:15084598-A-T hg38:Y:12972688-A-T | ** | ||||||
| hg19:Y:15143619-T-C hg38:Y:13031706-T-C | ** | ||||||
| hg19:Y:15218603-G-A hg38:Y:13106689-G-A | ** | ||||||
| hg19:Y:15279354-T-A hg38:Y:13167453-T-A | ** | ||||||
| hg19:Y:15400361-C-A hg38:Y:13288481-C-A | ** | ||||||
| hg19:Y:15404296-TC-T hg38:Y:13292416-TC-T | ** | ||||||
| hg19:Y:15424369-C-A hg38:Y:13312489-C-A | ** | ||||||
| hg19:Y:15532435-C-G hg38:Y:13420555-C-G | ** | ||||||
| hg19:Y:15623392-A-G hg38:Y:13511512-A-G | ** | ||||||
| hg19:Y:15731325-G-A hg38:Y:13619445-G-A | ** | ||||||
| hg19:Y:16047708-A-G hg38:Y:13935828-A-G | ** | ||||||
| hg19:Y:16054827-C-G hg38:Y:13942947-C-G | ** | ||||||
| hg19:Y:16079389-A-T hg38:Y:13967509-A-T | ** | ||||||
| hg19:Y:16147421-T-G hg38:Y:14035541-T-G | P8_Dst | ** | |||||
| hg19:Y:16240650-CA-C hg38:Y:14128770-CA-C | ** | ||||||
| hg19:Y:16422060-G-T hg38:Y:14310180-G-T | ** | ||||||
| hg19:Y:16432662-G-A hg38:Y:14320782-G-A | ** | ||||||
| hg19:Y:16550961-C-A hg38:Y:14439081-C-A | ** | ||||||
| hg19:Y:16654636-A-G hg38:Y:14542756-A-G | ** | ||||||
| hg19:Y:16738222-T-C hg38:Y:14626342-T-C | ** | ||||||
| hg19:Y:16904607-C-T hg38:Y:14792727-C-T | ** | ||||||
| hg19:Y:16971446-C-T hg38:Y:14859566-C-T | ** | ||||||
| hg19:Y:17196385-C-A hg38:Y:15084505-C-A | ** | ||||||
| hg19:Y:17211405-G-A hg38:Y:15099525-G-A | ** | ||||||
| hg19:Y:17355605-C-A hg38:Y:15243725-C-A | ** | ||||||
| hg19:Y:17370810-T-C hg38:Y:15258930-T-C | ** | ||||||
| hg19:Y:17413358-G-A hg38:Y:15301478-G-A | FGC32879 | ** | |||||
| hg19:Y:17464897-T-C hg38:Y:15353017-T-C | ** | ||||||
| hg19:Y:17548616-C-G hg38:Y:15436736-C-G | ** | ||||||
| hg19:Y:17567514-C-A hg38:Y:15455634-C-A | ** | ||||||
| hg19:Y:17728587-A-T hg38:Y:15616707-A-T | ** | ||||||
| hg19:Y:17885965-T-C hg38:Y:15774085-T-C | ** | ||||||
| hg19:Y:17947003-G-A hg38:Y:15835123-G-A | ** | ||||||
| hg19:Y:17947007-G-C hg38:Y:15835127-G-C | ** | ||||||
| hg19:Y:18159180-G-C hg38:Y:16047300-G-C | ** | ||||||
| hg19:Y:18263636-G-A hg38:Y:16151756-G-A | ** | ||||||
| hg19:Y:18368638-G-GTT hg38:Y:16256758-G-GTT | P6_Prx | ** | |||||
| hg19:Y:18524547-G-A hg38:Y:16412667-G-A | P6_Dst | ** | |||||
| hg19:Y:18733657-C-T hg38:Y:16621777-C-T | ** | ||||||
| hg19:Y:18796643-T-G hg38:Y:16684763-T-G | ** | ||||||
| hg19:Y:18796698-A-C hg38:Y:16684818-A-C | ** | ||||||
| hg19:Y:18862039-C-A hg38:Y:16750159-C-A | ** | ||||||
| hg19:Y:18872115-C-A hg38:Y:16760235-C-A | ** | ||||||
| hg19:Y:18924900-T-C hg38:Y:16813020-T-C | ** | ||||||
| hg19:Y:18948198-A-T hg38:Y:16836318-A-T | ** | ||||||
| hg19:Y:18980614-A-T hg38:Y:16868734-A-T | ** | ||||||
| hg19:Y:19012460-C-A hg38:Y:16900580-C-A | ** | ||||||
| hg19:Y:19036745-AT-A hg38:Y:16924865-AT-A | ** | ||||||
| hg19:Y:19053229-A-C hg38:Y:16941349-A-C | ** | ||||||
| hg19:Y:19059836-G-C hg38:Y:16947956-G-C | ** | ||||||
| hg19:Y:19059840-C-T hg38:Y:16947960-C-T | ** | ||||||
| hg19:Y:19059842-A-C hg38:Y:16947962-A-C | ** | ||||||
| hg19:Y:19059846-C-T hg38:Y:16947966-C-T | ** | ||||||
| hg19:Y:19318289-A-G hg38:Y:17206409-A-G | ** | ||||||
| hg19:Y:19575793-A-G hg38:Y:17463913-A-G | P5_Prx | ** | |||||
| hg19:Y:21073275-TA-T hg38:Y:18911389-TA-T | ** | ||||||
| hg19:Y:21267804-T-C hg38:Y:19105918-T-C | ** | ||||||
| hg19:Y:21455729-T-G hg38:Y:19293843-T-G | ** | ||||||
| hg19:Y:21573952-A-C hg38:Y:19412066-A-C | ** | ||||||
| hg19:Y:21583512-G-A hg38:Y:19421626-G-A | ** | ||||||
| hg19:Y:21624684-A-C hg38:Y:19462798-A-C | ** | ||||||
| hg19:Y:21624695-A-T hg38:Y:19462809-A-T | ** | ||||||
| hg19:Y:21852339-C-G hg38:Y:19690453-C-G | ** | ||||||
| hg19:Y:21964959-A-G hg38:Y:19803073-A-G | ** | ||||||
| hg19:Y:21993862-C-T hg38:Y:19831976-C-T | ** | ||||||
| hg19:Y:22051439-T-G hg38:Y:19889553-T-G | ** | ||||||
| hg19:Y:22281942-A-C hg38:Y:20120056-A-C | DYZ19 | ** | |||||
| hg19:Y:22427498-G-A hg38:Y:20265612-G-A | DYZ19 | ** | |||||
| hg19:Y:22580101-G-C hg38:Y:20418215-G-C | ** | ||||||
| hg19:Y:22651455-T-A hg38:Y:20489569-T-A | ** | ||||||
| hg19:Y:22893358-T-TTTCC hg38:Y:20731472-T-TTTCC | ** | ||||||
| hg19:Y:23058603-C-G hg38:Y:20896717-C-G | ** | ||||||
| hg19:Y:23372095-T-A hg38:Y:21210209-T-A | ** | ||||||
| hg19:Y:23412147-C-A hg38:Y:21250261-C-A | ** | ||||||
| hg19:Y:23501790-G-A hg38:Y:21339904-G-A | ** | ||||||
| hg19:Y:23514387-A-G hg38:Y:21352501-A-G | ** | ||||||
| hg38:Y:21783541-G-C | ** | ||||||
| hg38:Y:21783589-A-T | ** | ||||||
| hg19:Y:23952944-G-T hg38:Y:21806797-G-T | ** | ||||||
| hg19:Y:24402272-G-C hg38:Y:22256125-G-C | ** | ||||||
| hg19:Y:26249682-C-A hg38:Y:24103535-C-A | P1_Y1 | ** | |||||
| hg19:Y:27546787-G-A hg38:Y:25400640-G-A | P1_Y2 | ** | |||||
| hg19:Y:27808478-G-T hg38:Y:25662331-G-T | P1_Y2 | ** | |||||
| hg19:Y:27861792-A-C hg38:Y:25715645-A-C | P1_Y2 | ** | |||||
| hg19:Y:28585621-A-G hg38:Y:26439474-A-G | ** | ||||||
| hg19:Y:28599060-C-A hg38:Y:26452913-C-A | ** | ||||||
| hg19:Y:28622788-C-T hg38:Y:26476641-C-T | ** | ||||||
| hg19:Y:28622794-A-G hg38:Y:26476647-A-G | ** | ||||||
| hg19:Y:28657915-A-G hg38:Y:26511768-A-G | ** | ||||||
| hg19:Y:28699832-G-T hg38:Y:26553685-G-T | ** | ||||||
| hg19:Y:28720781-T-C hg38:Y:26574634-T-C | ** | ||||||
| hg19:Y:28759737-A-G hg38:Y:26613590-A-G | ** | ||||||
| hg19:Y:28767057-C-A hg38:Y:26620910-C-A | ** | ||||||
| hg38:Y:56849739-G-C | ** | ||||||
| hg38:Y:56857511-C-A | ** | ||||||
| hg19:Y:8628154-CTTTTT-C hg38:Y:8760113-CTTTTT-C | 16×T | *** | |||||
| hg19:Y:16745328-C-A hg38:Y:14633448-C-A | *** | ||||||
| hg19:Y:13489616-CCCAC-C,CCCCCT hg38:Y:11333940-CCCAC-C,CCCCCT | *** | ||||||
| hg19:Y:26593023-C-A hg38:Y:24446876-C-A | P1_g2 | *** | |||||
| hg19:Y:5586994-G-T hg38:Y:5718953-G-T | *** | ||||||
| hg19:Y:10020388-T-C hg38:Y:10182779-T-C | BY49074 | *** | |||||
| hg38:Y:10965679-G-T | *** | ||||||
| hg19:Y:2881465-T-C hg38:Y:3013424-T-C | *** | ||||||
| hg19:Y:8325778-C-G hg38:Y:8457737-C-G | *** | ||||||
| hg19:Y:2777828-TAAA-T,TA hg38:Y:2909787-TAAA-T,TA | 15×A | *** | |||||
| hg19:Y:5219375-T-A hg38:Y:5351334-T-A | *** | ||||||
| hg19:Y:13442590-C-A hg38:Y:11286914-C-A | *** | ||||||
| hg19:Y:22039721-C-A hg38:Y:19877835-C-A | *** | ||||||
| hg19:Y:2806030-ATTTT-A,ATTTTT hg38:Y:2937989-ATTTT-A,ATTTTT | 16×T | *** | |||||
| hg19:Y:3374062-A-T hg38:Y:3506021-A-T | *** | ||||||
| hg19:Y:5967796-C-A hg38:Y:6099755-C-A | *** | ||||||
| hg19:Y:7009185-TTC-T,TT hg38:Y:7141144-TTC-T,TT | *** | ||||||
| hg19:Y:7236789-C-CAA hg38:Y:7368748-C-CAA | 13×A | *** | |||||
| hg19:Y:9442492-C-A hg38:Y:9604883-C-A | *** | ||||||
| hg38:Y:11018942-C-T | FT393850 | *** | |||||
| hg19:Y:13801043-G-T hg38:Y:11680337-G-T | DYZ17 | *** | |||||
| hg19:Y:14402286-C-A hg38:Y:12281583-C-A | *** | ||||||
| hg19:Y:15450447-T-G hg38:Y:13338567-T-G | *** | ||||||
| hg19:Y:16297630-C-A hg38:Y:14185750-C-A | *** | ||||||
| hg19:Y:16527959-C-A hg38:Y:14416079-C-A | *** | ||||||
| hg19:Y:21184556-CA-C,CAA hg38:Y:19022670-CA-C,CAA | 10×A | *** | |||||
| hg19:Y:22893426-G-T hg38:Y:20731540-G-T | *** | ||||||
| hg19:Y:23188799-TC-T hg38:Y:21026913-TC-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 311069 | 9816514 | 8006086 | 7887497 |
| Used in age calculations | 9816514 | 8006086 | 7887497 |
| Counts of SNPs | 9 | 7 |
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