Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z198 > CTS4188 > S14445 > BY3252 > BY103776

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
765399
10629915-A-G A+
10988041-G-C A+
10770663-T-G A*
10769942-A-T A*
28817037-G-C 26670890-G-C A*
22283814-G-T 20121928-G-T DYZ19 A*
6233487-G-A 6365446-G-A IR3_Dst A*
28817747-A-G 26671600-A-G A*
17665442-C-G 15553562-C-G BY191206 YY+
18989937-T-C 16878057-T-C BY191464 Y+
18999461-C-T 16887581-C-T BY191468 YY+
13675060-A-G 11519384-A-G FGC61374FGC61374 +
16938025-G-A 14826145-G-A YY+
8026903-T-C 8158862-T-C BY190021 YY8×TC+
8012089-C-T 8144048-C-T BY190017 YY+
7683820-G-C 7815779-G-C BY189922 YY+
18105293-CTT-C 15993413-CTT-C +
9938228-A-C 10100619-A-C BY209391 Y+
17601-C-T +
24485107-T-G 22338960-T-G BY192330 +
13983547-G-A 11862841-G-A BY190464 Y+
14051452-A-T 11930746-A-T BY190479 YY+
8602218-A-AT 8734177-A-AT 11×T*
22317243-G-A 20155357-G-A DYZ19 *
13450315-ATTTAATTCCATTGCA-A,ATTGCATTCCATTGCT 11294639-ATTTAATTCCATTGCA-A,ATTGCATTCCATTGCT *
21573274-C-A 19411388-C-A YY*
13465029-A-T 11309353-A-T **
10842946-A-C **
10847868-A-C **
10847874-G-C **
10851151-C-A **
13880916-C-T 11760210-C-T **
10864224-T-A **
10870444-T-A **
10889774-C-T **
10889810-C-A **
10898715-C-A **
10837062-C-T **
13887572-C-T 11766866-C-T **
10835786-C-A **
10942181-C-T **
10831626-C-A **
14030396-C-A 11909690-C-A **
10824196-C-G **
10823524-C-A **
10813019-CAA-C **
10813014-TA-T **
14033011-T-C 11912305-T-C **
10813013-C-CAGA **
10813008-C-G **
10812991-C-T **
10812986-C-T **
10812981-C-T **
14102532-C-T 11981826-C-T **
10928962-G-T **
13566954-T-C 11411278-T-C **
11667817-T-G **
10976588-G-T **
13298991-C-A 11143315-C-A **
13242966-C-A 11087290-C-A **
13202833-G-C 11047157-G-C **
11032962-AC-A **
11032959-T-TC **
11011780-C-T **
11011779-C-T **
11005495-C-G **
13483162-C-A 11327486-C-A **
11000905-C-T **
11000904-T-A **
11000474-C-T **
13487688-C-G 11332012-C-G **
10992570-T-C **
10974648-C-A **
13461230-T-C 11305554-T-C **
10969412-C-A **
10960798-C-A **
10960546-C-T **
10960515-T-A **
10960514-G-A **
10812969-T-C **
10952204-C-G **
10950622-C-A **
10949625-C-A **
10945199-T-C **
10945153-T-G **
10945151-C-CCCTAA **
13509068-T-A 11353392-T-A **
10945015-C-A **
10953242-CT-C **
10744227-C-A **
10805792-T-C **
6797002-CT-C 6928961-CT-C **
6458271-G-A 6590230-G-A **
6669291-C-A 6801250-C-A **
6720373-C-A 6852332-C-A **
6753396-G-A 6885355-G-A **
6796850-C-A 6928809-C-A **
6796973-G-A 6928932-G-A **
6805457-G-GA 6937416-G-GA **
5635463-G-T 5767422-G-T **
6856515-C-A 6988474-C-A **
6903760-G-A 7035719-G-A **
6960353-C-T 7092312-C-T **
6995145-C-G 7127104-C-G **
7105234-G-A 7237193-G-A **
7154422-C-A 7286381-C-A **
6375603-C-A 6507562-C-A **
5180036-G-T 5311995-G-T **
7216539-C-A 7348498-C-A **
2835743-C-A 2967702-C-A **
2688001-G-A 2819960-G-A **
2688014-G-A 2819973-G-A **
2688018-T-C 2819977-T-C **
2761964-G-A 2893923-G-A **
2814122-T-C 2946081-T-C **
2823756-C-A 2955715-C-A **
2850948-C-A 2982907-C-A **
4749451-T-C 4881410-T-C **
3109111-C-T 3241070-C-T **
3112149-G-A 3244108-G-A **
3178386-C-A 3310345-C-A **
3592995-C-A 3724954-C-A **
3800064-C-A 3932023-C-A **
4138903-A-G 4270862-A-G **
7195176-T-C 7327135-T-C **
7273031-CT-C 7404990-CT-C **
10800334-C-T **
10657238-A-C **
9088807-G-T 9251198-G-T **
9754566-T-C 9916957-T-C **
9930275-G-T 10092666-G-T **
10045560-G-T 10207951-G-T **
10652974-C-CCACTG **
10652992-C-G **
10678282-G-GATTCCATTCCTCCATTGC **
9040173-G-T 9202564-G-T **
14298124-C-T 12177418-C-T **
10756963-T-C **
10756982-C-A **
10767275-C-A **
10783313-C-A **
10800327-T-G **
9046856-G-T 9209247-G-T **
9110420-G-T **
7315760-C-A 7447719-C-A **
8035966-G-T 8167925-G-T **
7590905-C-G 7722864-C-G **
7604183-C-A 7736142-C-A **
7651447-A-T 7783406-A-T **
7725733-C-A 7857692-C-A **
7783097-G-T 7915056-G-T **
7922380-G-T 8054339-G-T **
8571041-G-A 8703000-G-A **
8879923-C-T 9011882-C-T FT65029 **
8585619-C-T 8717578-C-T **
8674279-C-A 8806238-C-A **
8677929-G-T 8809888-G-T **
8708357-C-A 8840316-C-A **
8728297-G-A 8860256-G-A **
8817064-C-A 8949023-C-A **
14171828-A-G 12051122-A-G **
14847504-C-A 12735570-C-A **
14317887-C-A 12197181-C-A **
20214096-G-ATCC 18052210-G-ATCC P5_Dst **
19519613-G-A 17407733-G-A **
19526726-T-C 17414846-T-C **
19849403-C-A 17737523-C-A P5_Prx **
20214078-C-G 18052192-C-G P5_Dst **
20214082-T-C 18052196-T-C P5_Dst **
20214085-T-C 18052199-T-C P5_Dst **
20487999-A-C 18326113-A-C P5_Dst **
19465022-A-G 17353142-A-G **
20693729-C-A 18531843-C-A P4_Prx **
21039520-C-A 18877634-C-A **
21094942-C-A 18933056-C-A **
21111517-C-A 18949631-C-A **
21128260-A-T 18966374-A-T **
21223098-C-A 19061212-C-A **
19518852-C-A 17406972-C-A **
19439008-C-A 17327128-C-A **
21314441-C-A 19152555-C-A **
19066426-G-T 16954546-G-T FT65307 **
18827163-C-A 16715283-C-A **
18836917-A-C 16725037-A-C **
18841116-A-G 16729236-A-G **
18841120-A-T 16729240-A-T **
18841121-A-AC 16729241-A-AC **
18939027-C-G 16827147-C-G FT65299 **
19152018-C-A 17040138-C-A **
19369442-A-T 17257562-A-T **
19226512-C-A 17114632-C-A **
19281812-C-A 17169932-C-A **
19301416-G-T 17189536-G-T **
19301504-C-T 17189624-C-T **
19302867-C-A 17190987-C-A **
19369441-C-T 17257561-C-T **
21242472-G-T 19080586-G-T **
21355589-C-A 19193703-C-A **
18660624-C-A 16548744-C-A **
23997281-G-T 21851134-G-T **
23269580-C-G 21107694-C-G **
23319778-G-T 21157892-G-T **
23393543-A-T 21231657-A-T **
23713788-A-G 21551902-A-G **
23801531-C-A 21639645-C-A **
21752050-A-G **
24421864-G-T 22275717-G-T **
23059663-C-A 20897777-C-A **
26376546-G-T 24230399-G-T P1_Y1 **
28514037-C-A 26367890-C-A **
28701697-G-A 26555550-G-A **
28732443-A-C 26586296-A-C **
28754932-T-A 26608785-T-A **
56844379-C-T **
23191867-G-A 21029981-G-A **
22787777-C-A 20625891-C-A **
21413944-C-A 19252058-C-A **
22105243-C-A 19943357-C-A **
21444509-G-T 19282623-G-T **
21541316-C-A 19379430-C-A **
21597531-C-A 19435645-C-A **
21686688-C-A 19524802-C-A **
21756868-C-A 19594982-C-A **
21834334-G-A 19672448-G-A BY192775 **
22166492-C-A 20004606-C-A **
22781967-T-C 20620081-T-C **
22185552-G-A 20023666-G-A **
22189671-C-A 20027785-C-A **
22521096-A-G 20359210-A-G **
22528496-T-C 20366610-T-C **
22549053-G-A 20387167-G-A **
22603359-C-A 20441473-C-A **
18750989-C-A 16639109-C-A **
18491566-C-A 16379686-C-A P6_Dst **
14359656-C-A 12238951-C-A **
15793378-G-A 13681498-G-A **
15573039-A-C 13461159-A-C **
15579288-C-A 13467408-C-A **
15600572-G-A 13488692-G-A **
15724280-C-A 13612400-C-A **
15731934-C-A 13620054-C-A **
15744290-C-A 13632410-C-A **
15830245-A-C 13718365-A-C FT65182 **
15557289-A-T 13445409-A-T **
15909491-G-C 13797611-G-C **
15909545-A-G 13797665-A-G **
15909546-T-C 13797666-T-C **
15909547-T-A 13797667-T-A **
15909556-A-ATT 13797676-A-ATT **
15950303-T-C 13838423-T-C **
15558749-C-A 13446869-C-A **
15542698-C-A 13430818-C-A **
16006108-C-A 13894228-C-A **
14817176-C-A 12705247-C-A **
14368069-C-A 12247365-C-A **
14392077-C-A 12271373-C-A **
14422045-T-C 12301320-T-C FT65118 **
14445673-G-A 12324946-G-A **
14530893-C-T 12419094-C-T **
14767950-C-A 12656019-C-A **
10846816-G-T **
15476012-C-A 13364132-C-A **
14967325-C-T 12855400-C-T **
15059445-A-T 12947537-A-T **
15129413-C-A 13017500-C-A **
15173357-C-A 13061443-C-A **
15209529-A-T 13097615-A-T **
15372575-A-T 13260695-A-T **
15952886-G-A 13841006-G-A **
16091360-G-A 13979480-G-A **
18243131-C-A 16131251-C-A **
17499249-G-T 15387369-G-T **
17210102-C-A 15098222-C-A **
17313202-C-A 15201322-C-A **
17313388-C-A 15201508-C-A **
17347531-C-A 15235651-C-A **
17353038-A-G 15241158-A-G **
17470666-G-A 15358786-G-A **
17516380-C-A 15404500-C-A **
17133972-T-C 15022092-T-C **
17729454-G-A 15617574-G-A **
18008696-T-TTTG 15896816-T-TTTG P7_Dst **
18045331-C-A 15933451-C-A **
18047406-C-A 15935526-C-A **
18074462-C-A 15962582-C-A **
18242411-C-A 16130531-C-A **
17140695-C-A 15028815-C-A **
17014001-C-A 14902121-C-A **
16214090-C-A 14102210-C-A **
16458436-C-A 14346556-C-A **
16244834-C-A 14132954-C-A **
16270760-C-T 14158880-C-T **
16345092-C-CTTG 14233212-C-CTTG 7×TTG**
16384942-C-A 14273062-C-A **
16451898-C-A 14340018-C-A **
16458374-C-A 14346494-C-A **
16507452-C-A 14395572-C-A **
17008769-C-A 14896889-C-A **
16601479-T-G 14489599-T-G **
16601536-G-A 14489656-G-A **
16753542-C-A 14641662-C-A **
16841915-G-A 14730035-G-A **
16871347-ATT-A 14759467-ATT-A **
16871357-T-C 14759477-T-C **
16988358-C-A 14876478-C-A **
2687998-A-G 2819957-A-G **
9198246-TTG-T 9360637-TTG-T 15×TG**
7702286-C-A 7834245-C-A FT19374 **
10802234-TCCTCG-T **
16601474-G-A 14489594-G-A **
14986098-C-A 12874166-C-A **
7310416-T-C 7442375-T-C **
8694281-C-A 8826240-C-A **
11003193-C-T **
17187369-C-A 15075489-C-A **
10813171-C-T **
10842960-T-C **
10823486-T-C **
17018776-C-A 14906896-C-A **
10813174-C-T **
16217389-A-AT 14105509-A-AT 10×T**
10826208-C-T **
10744250-T-C **
16601533-G-A 14489653-G-A **
13488808-G-C 11333132-G-C **
3715711-C-A 3847670-C-A **
10924436-T-C **
14765362-C-A 12653431-C-A **
13487739-T-C 11332063-T-C **
8987665-C-A 9150056-C-A **
6688753-C-A 6820712-C-A **
26428120-C-A 24281973-C-A P1_Y1 **
6943972-CTTT-C 7075931-CTTT-C 15×T**
21413875-C-A 19251989-C-A **
21468745-ATTTT-A 19306859-ATTTT-A 25×T**
10749082-C-T **
10749066-T-A **
10749044-T-C **
16601494-G-A 14489614-G-A **
56850338-AT-A **
10749020-T-C **
21714031-C-A 19552145-C-A **
16601435-A-C 14489555-A-C **
11648195-C-A **
10958986-C-A **
10925363-T-C **
10925625-A-ACTTCG **
11011782-G-T **
56848806-G-A **
56848798-T-A **
11033937-G-A **
56707301-A-C **
10812982-G-T **
15012837-TCA-T 12900925-TCA-T **
10823471-G-T **
11034908-A-T **
11034904-G-A **
14104286-C-A 11983580-C-A **
10813579-T-A **
14648595-C-A 12536660-C-A **
7220936-G-T 7352895-G-T **
10960818-C-A **
10756992-C-A **
10967538-C-G **
2833178-C-CTT 2965137-C-CTT 19×T**
16520847-G-T 14408967-G-T **
10800337-C-T **
10809601-T-A **
17924894-AT-A 15813014-AT-A 8×T**
10876999-G-T **
18581853-T-C 16469973-T-C **
10749028-ATTCAGTTC-A **
14298120-A-G 12177414-A-G **
13596413-C-A 11440737-C-A **
56840113-G-T **
10756995-G-C **
10749003-T-A **
14208894-C-A 12088188-C-A **
10844612-A-C **
16825129-C-A 14713249-C-A **
10760434-C-A **
14032825-CT-C 11912119-CT-C 8×T**
10879449-C-T **
10879438-G-A **
10879426-C-G **
13487761-C-CACA 11332085-C-CACA **
13487748-ACCC-A 11332072-ACCC-A **
19143153-C-A 17031273-C-A **
56839979-C-A **
10760446-A-G **
10941117-A-T **
10941138-T-C **
10982407-T-A **
10982403-C-T **
18838532-C-A 16726652-C-A 9×A**
11013601-T-C **
22944636-C-A 20782750-C-A **
10744246-C-G **
10842959-C-G **
11034889-G-A **
10842962-C-T **
10842971-A-T **
18724886-GTT-G 16613006-GTT-G 11×T**
56845285-G-A **
20214067-G-C 18052181-G-C P5_Dst **
13453273-C-G 11297597-C-G **
10749016-G-C **
4959863-C-A 5091822-C-A **
21691922-C-A 19530036-C-A **
14387820-C-A 12267116-C-A **
15012812-T-C 12900900-T-C **
13489083-G-T 11333407-G-T **
17367934-G-A 15256054-G-A FT2133 **
4153744-C-A 4285703-C-A **
3251878-C-A 3383837-C-A **
13705519-T-C 11549843-T-C A12740 **
13705517-A-T 11549841-A-T A12739 **
21115497-C-A 18953611-C-A **
15793391-C-A 13681511-C-A **
10756990-G-C **
9111501-G-T **
16601518-G-A 14489638-G-A **
11031710-C-A **
10889812-T-C **
6786986-C-A 6918945-C-A **
28497838-GA-G 26351691-GA-G 10×A**
11034815-A-ACCCCC **
13821458-C-A 11700752-C-A **
15209530-A-T 13097616-A-T BY156487 16×T**
6882441-C-A 7014400-C-A **
10809611-C-A **
4049254-C-A 4181213-C-A **
10982248-C-T **
4996176-C-A 5128135-C-A **
10762852-T-A **
10982270-C-G **
10880580-G-T **
14967326-A-G 12855401-A-G **
21084437-A-AT 18922551-A-AT 12×T**
23196627-T-TAA 21034741-T-TAA 17×A**
16455238-C-A 14343358-C-A **
15909482-A-C 13797602-A-C **
10831616-C-A **
28754926-C-A 26608779-C-A **
11006921-C-T **
22745266-G-GAA 20583380-G-GAA 13×A**
21751751-GTT-G 19589865-GTT-G 12×T**
14357076-T-A 12236371-T-A **
6805443-T-C 6937402-T-C **
16827661-A-AT 14715781-A-AT 9×T**
23452688-C-A 21290802-C-A **
16871341-G-C 14759461-G-C **
11031213-C-T **
13462356-T-C 11306680-T-C **
16226666-C-CA 14114786-C-CA 10×A**
16057206-A-G 13945326-A-G **
15127752-C-A 13015839-C-A **
7651449-G-A 7783408-G-A **
14296318-C-A 12175612-C-A **
6925835-C-A 7057794-C-A **
14940073-CAAA-C 12828147-CAAA-C 15×A**
17940647-C-A 15828767-C-A **
3627691-A-G 3759650-A-G **
21875806-C-A 19713920-C-A **
22040226-G-GA 19878340-G-GA 9×A**
10751332-C-A **
10767004-C-A **
20815857-C-A 18653971-C-A P4_Gap **
14369769-G-T 12249065-G-T **
15358761-GA-G 13246880-GAA-G 26×A**
15533775-C-A 13421895-C-A **
17676298-G-A 15564418-G-A **
10693020-G-T **
7203393-C-A 7335352-C-A **
13301617-C-CT 11145941-C-CT 8×T**
2739932-GT-G 2871891-GT-G 10×T**
17408308-C-A 15296428-C-A **
7866375-C-A 7998334-C-A **
11034401-C-A **
14743491-C-A 12631560-C-A **
15995099-C-A 13883219-C-A **
18246301-G-GAGAAAGAAAGAA 16134421-G-GAGAAAGAAAGAA 14×AGAA**
13488372-C-A 11332696-C-A **
15365193-C-A 13253313-C-A **
23742470-G-A 21580584-G-A **
2688010-C-T 2819969-C-T **
13332402-C-A 11176726-C-A **
15240734-CAAA-C 13128820-CAAA-C 15×A**
10959506-C-T **
26106057-C-A 23959910-C-A P1_Y1 **
10954553-C-A **
19023429-C-A 16911549-C-A **
14729704-C-A 12617772-C-A **
9980362-C-T 10142753-C-T **
16093052-C-A 13981172-C-A **
7922290-C-A 8054249-C-A **
6840819-C-A 6972778-C-A **
16454659-C-A 14342779-C-A **
9980403-C-A 10142794-C-A **
10959511-C-T **
13255624-G-T 11099948-G-T FT65885 10×T**
13462337-ACTCC-A 11306661-ACTCC-A **
10978262-G-T **
11646643-C-A **
10756977-T-C **
10767347-C-A **
10990614-G-T **
11005091-C-A **
15909510-A-C 13797630-A-C **
15909492-T-C 13797612-T-C **
15909487-C-T 13797607-C-T **
5675470-G-T 5807429-G-T **
14464226-C-A 12343499-C-A **
9830489-C-A 9992880-C-A **
10018303-C-A 10180694-C-A **
21752781-G-T **
10999845-A-C **
10012473-C-A 10174864-C-A **
17277447-G-T 15165567-G-T **
15909476-G-A 13797596-G-A **
10823497-TCCACC-T **
15909527-C-T 13797647-C-T **
10744270-T-G **
17585515-G-GTT 15473635-G-GTT 12×T**
27692994-C-A 25546847-C-A P1_Y2 **
56850385-A-G **
15909521-A-C 13797641-A-C **
56850384-T-A **
10949615-T-C **
16428554-C-A 14316674-C-A **
14858555-C-A 12746621-C-A **
6755702-C-A 6887661-C-A **
10971732-C-A **
5267536-ATTT-A 5399495-ATTT-A 22×T**
10925034-A-T **
15909515-A-G 13797635-A-G **
2774663-C-CTT 2906622-C-CTT 18×T**
16704563-G-T 14592683-G-T **
10825672-C-T **
4918345-C-A 5050304-C-A **
56850314-G-T **
10845732-A-G **
10760751-T-A **
23427125-C-A 21265239-C-A **
10845642-TTTCCA-T **
3990635-C-A 4122594-C-A **
7670694-C-A 7802653-C-A **
10664474-C-A **
19122685-C-A 17010805-C-A ***
22185400-C-A 20023514-C-A ***
21233401-G-T 19071515-G-T ***
10934765-AG-A,AA ***
21294537-A-G 19132651-A-G FT65346 ***
26042036-C-A 23895889-C-A P1_Y1 ***
10952814-C-A ***
19032642-A-G 16920762-A-G ***
21528346-T-C 19366460-T-C ***
15097814-TTTA-T 12985902-TTTA-T 6×TTA***
18963581-C-A 16851701-C-A ***
17184658-C-CT 15072778-C-CT 14599866-G-A 9×T***
21801552-C-A 19639666-C-A ***
27829245-C-A 25683098-C-A P1_Y2 ***
21228405-A-C 19066519-A-C ***
22698718-C-T 20536832-C-T ***
22929693-GAA-G 20767807-GAA-G 14×A***
7960965-A-AT 8092924-A-AT 10×T***
22141016-A-G 19979130-A-G ***
22106904-C-CT 19945018-C-CT ***
21890646-C-A 19728760-C-A ***
10951003-CTCCTA-C ***
22040570-C-A 19878684-C-A ***
18957312-C-A 16845432-C-A ***
19160590-C-A 17048710-C-A ***
21731921-C-A 19570035-C-A ***
2704138-AATT-A 2836097-AATT-A 6×ATT***
23390771-C-A 21228885-C-A ***
22189925-G-A 20028039-G-A ***
13462350-C-A 11306674-C-A ***
19513143-C-CT 17401263-C-CT 20×T***
21529541-C-A 19367655-C-A ***
13455611-T-G 11299935-T-G ***
11003233-C-G ***
11003197-A-T ***
13855554-T-TCC 11734848-T-TCC ***
19411480-C-A 17299600-C-A ***
8119053-GTT-G 8251012-GTT-G 16×T***
13488780-G-T 11333104-G-T ***
21690324-G-A 19528438-G-A ***
13855552-A-ATTC 11734846-A-ATTC ***
19361033-C-A 17249153-C-A ***
19317060-C-T 17205180-C-T ***
22518753-TAAA-T 20356867-TAAA-T 14×A***
22914176-C-A 20752290-C-A ***
22846263-G-A 20684377-G-A ***
19563827-G-A 17451947-G-A ***
23833095-A-G 21671209-A-G ***
10796687-C-T ***
19187798-C-A 17075918-C-A ***
22844611-AT-A 20682725-AT-A ***
13488790-C-A 11333114-C-A ***
18716745-A-C 16604865-A-C ***
21567077-C-A 19405191-C-A ***
18641755-C-A 16529875-C-A ***
10911895-C-G ***
9022327-G-T 9184718-G-T ***
9089557-C-A 9251948-C-A ***
9439563-C-A 9601954-C-A ***
9517342-C-T 9679733-C-T ***
10663229-A-C,T ***
10762842-A-G ***
10967553-C-G ***
10785766-C-A ***
10861577-CT-C ***
13856652-C-A 11735946-C-A ***
10911896-A-T ***
8756783-A-G 8888742-A-G ***
13472169-C-G 11316493-C-G ***
10942746-CATTC-A,C ***
11015767-C-A ***
10958710-G-A ***
11646379-C-A ***
10990712-C-T ***
10919306-C-A ***
11025273-C-A ***
15832378-A-G 13720498-A-G ***
13462352-G-C 11306676-G-C ***
13846275-GAATGG-G,GAATGA 11725569-GAATGG-G,GAATGA ***
9107985-G-T ***
10758165-C-A ***
13811181-A-T 11690475-A-T ***
10829048-C-A ***
2686581-G-T 2818540-G-T ***
10663004-C-A ***
2688339-C-A 2820298-C-A ***
18095390-GA-G 15983510-GA-G 10×A***
2782986-C-A 2914945-C-A ***
2810881-G-A 2942840-G-A ***
17791245-CA-C,CAA 15679365-CA-C,CAA 13×A***
13194815-C-A 11039139-C-A ***
3164469-C-A 3296428-C-A ***
4172070-G-A 4304029-G-A ***
4538039-T-C 4669998-T-C ***
6594593-C-A 6726552-C-A ***
8523092-C-A 8655051-C-A ***
6649853-G-A 6781812-G-A ***
6677418-T-C 6809377-T-C ***
28770376-C-A 26624229-C-A ***
7247396-T-G 7379355-T-G ***
13453200-G-A 11297524-G-A ***
7516065-C-A 7648024-C-A ***
2892542-ATTTTT-A,ATTTT 3024501-ATTTTT-A,ATTTT 18×T***
7760235-G-T 7892194-G-T ***
7824097-C-A 7956056-C-A ***
7957139-T-C 8089098-T-C ***
7970547-C-A 8102506-C-A ***
10952824-C-A ***
14233790-C-A 12113084-C-A ***
18631645-C-A 16519765-C-A ***
11022959-CTCAAT-C ***
16660011-AT-A 14548131-AT-A 8×T***
16705003-G-T 14593123-G-T ***
16740803-T-C 14628923-T-C ***
16768443-G-A 14656563-G-A ***
16773782-C-A 14661902-C-A ***
10889232-C-CAAATA ***
16880524-C-A 14768644-C-A ***
10661911-T-C ***
17020166-C-A 14908286-C-A ***
17081649-C-A 14969769-C-A ***
17314717-C-A 15202837-C-A ***
17582041-C-A 15470161-C-A ***
16572600-G-A 14460720-G-A ***
10925030-C-T ***
10925004-A-C ***
17729765-C-A 15617885-C-A ***
17975159-C-A 15863279-C-A ***
10924999-A-AATCCT ***
18126292-C-A 16014412-C-A ***
18217657-C-A 16105777-C-A ***
18223094-C-A 16111214-C-A ***
10889225-T-G ***
18395599-CAA-C,CAAA 16283719-CAA-C,CAAA P6_Gap 15×A***
18593251-C-A 16481371-C-A ***
16651433-CTT-C,CTTT 14539553-CTT-C,CTTT 16×T***
16517813-C-A 14405933-C-A ***
14322542-C-A 12201836-C-A ***
15180302-G-T 13068388-G-T ***
14351995-G-A 12231290-G-A ***
16324220-C-A 14212340-C-A ***
14394468-TA-T,TAAA 12273764-TA-T,TAAA 16×A***
14652334-C-A 12540399-C-A ***
14749328-C-A 12637397-C-A ***
14851414-A-AT 12739480-A-AT 10×T***
14825534-C-A 12713601-C-A ***
14875592-GTTTTTTTTTTTTT-G,GTTT 12763662-GTTTTTTTTTTTTT-G,GTTT 28×T***
10967537-C-T ***
15123882-A-G 13011969-A-G ***
10992666-C-A ***
18029430-C-A 15917550-C-A ***
10925498-C-T ***
15403887-C-A 13292007-C-A ***
15412626-T-C 13300746-T-C ***
15477137-C-A 13365257-C-A ***
15492399-C-A 13380519-C-A ***
15537907-C-A 13426027-C-A ***
15721596-G-T 13609716-G-T ***
10992227-G-A ***
15779547-C-A 13667667-C-A ***
15824292-C-A 13712412-C-A ***
13446531-ATTCCATTC-A,ATTTCATTC 11290855-ATTCCATTC-A,ATTTCATTC ***
15979284-G-A 13867404-G-A ***
7284656-G-A 7416615-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 765399802921164994886491413
Used in age calculations802921164994886491413
Counts of SNPs118
Variant counts last updated 2019-08-26 23:03:58.



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