Maclean
BigY2: IN23640MDKA Birth:
ScotlandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 IN23640 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22236320-T-C hg38:Y:20074434-T-C | DYZ19 | A+ | |||||
| hg19:Y:22236318-G-A hg38:Y:20074432-G-A | DYZ19 | A+ | |||||
| hg19:Y:22310640-C-G hg38:Y:20148754-C-G | DYZ19 | A* | |||||
| hg19:Y:28816825-A-G hg38:Y:26670678-A-G | A* | ||||||
| hg19:Y:7195483-G-A hg38:Y:7327442-G-A | BY189817 | Y | Y | + | |||
| hg19:Y:22466203-G-T hg38:Y:20304317-G-T | FT458660 | DYZ19 | + | ||||
| hg19:Y:22478166-C-A hg38:Y:20316280-C-A | BY191966 | DYZ19 | + | ||||
| hg19:Y:22478519-T-A hg38:Y:20316633-T-A | FGC82804 | DYZ19 | + | ||||
| hg19:Y:23739130-G-A hg38:Y:21577244-G-A | BY192241 | + | |||||
| hg19:Y:13456688-C-A hg38:Y:11301012-C-A | ** | ||||||
| hg19:Y:58972309-T-A hg38:Y:56826162-T-A | ** | ||||||
| hg19:Y:13799342-C-A hg38:Y:11678636-C-A | ZS12469 | DYZ17 | ** | ||||
| hg19:Y:23317649-C-CT hg38:Y:21155763-C-CT | 37×T | ** | |||||
| hg19:Y:22356884-T-G hg38:Y:20194998-T-G | DYZ19 | ** | |||||
| hg19:Y:13466495-T-A hg38:Y:11310819-T-A | ** | ||||||
| hg19:Y:18984971-A-T hg38:Y:16873091-A-T | ** | ||||||
| hg19:Y:21306618-G-A hg38:Y:19144732-G-A | BY131937 | ** | |||||
| hg19:Y:22165238-C-A hg38:Y:20003352-C-A | ** | ||||||
| hg19:Y:14101392-TTC-T hg38:Y:11980686-TTC-T | ** | ||||||
| hg19:Y:19073836-A-G hg38:Y:16961956-A-G | AM01279 | ** | |||||
| hg19:Y:58976687-TGCTGAATTCC-T hg38:Y:56830540-TGCTGAATTCC-T | ** | ||||||
| hg19:Y:9023045-GT-G hg38:Y:9185436-GT-G | 9×T | ** | |||||
| hg19:Y:17914218-GTATATA-G hg38:Y:15802338-GTATATA-G | 15×TA | ** | |||||
| hg19:Y:13205502-A-G hg38:Y:11049826-A-G | ** | ||||||
| hg19:Y:13205504-C-T hg38:Y:11049828-C-T | ** | ||||||
| hg19:Y:58979263-C-A hg38:Y:56833116-C-A | ** | ||||||
| hg19:Y:9524019-GTATATATA-G hg38:Y:9686410-GTATATATA-G | 21×TA | ** | |||||
| hg19:Y:28818241-C-A hg38:Y:26672094-C-A | ** | ||||||
| hg19:Y:7107011-CTATATA-C hg38:Y:7238970-CTATATA-C | 20×TA | ** | |||||
| hg19:Y:16308516-T-G hg38:Y:14196636-T-G | ** | ||||||
| hg19:Y:16834574-C-T hg38:Y:14722694-C-T | ** | ||||||
| hg38:Y:10987514-T-G | ** | ||||||
| hg19:Y:22798035-G-T hg38:Y:20636149-G-T | ** | ||||||
| hg38:Y:10992302-C-A | ** | ||||||
| hg19:Y:14228885-C-A hg38:Y:12108179-C-A | ** | ||||||
| hg19:Y:15946763-C-A hg38:Y:13834883-C-A | ** | ||||||
| hg19:Y:18558199-C-A hg38:Y:16446319-C-A | ** | ||||||
| hg19:Y:6765615-A-C hg38:Y:6897574-A-C | ** | ||||||
| hg19:Y:15410548-G-C hg38:Y:13298668-G-C | ** | ||||||
| hg19:Y:15410551-A-T hg38:Y:13298671-A-T | ** | ||||||
| hg19:Y:15410566-G-A hg38:Y:13298686-G-A | ** | ||||||
| hg19:Y:15410570-C-G hg38:Y:13298690-C-G | ** | ||||||
| hg38:Y:10958975-G-C | ** | ||||||
| hg38:Y:10669472-T-A | ** | ||||||
| hg38:Y:10796641-C-A | ** | ||||||
| hg38:Y:10746945-T-G | ** | ||||||
| hg38:Y:10746957-C-G | ** | ||||||
| hg38:Y:10746958-C-G | ** | ||||||
| hg38:Y:10746997-C-CCA | ** | ||||||
| hg38:Y:10747003-CAT-C | ** | ||||||
| hg38:Y:56826607-C-A | ** | ||||||
| hg38:Y:10871077-C-T | ** | ||||||
| hg38:Y:10871091-G-A | ** | ||||||
| hg38:Y:10871106-A-T | ** | ||||||
| hg38:Y:10871116-G-T | ** | ||||||
| hg19:Y:28598602-C-A hg38:Y:26452455-C-A | ** | ||||||
| hg38:Y:10992280-C-G | ** | ||||||
| hg19:Y:6233724-A-ACT hg38:Y:6365683-A-ACT | IR3_Dst | ** | |||||
| hg19:Y:13207975-C-A hg38:Y:11052299-C-A | ** | ||||||
| hg38:Y:10987490-A-T | ** | ||||||
| hg38:Y:10958951-T-C | ** | ||||||
| hg38:Y:10999612-A-T | ** | ||||||
| hg19:Y:13229679-C-A hg38:Y:11074003-C-A | ** | ||||||
| hg19:Y:24877503-CTTT-C hg38:Y:22731356-CTTT-C | g1 | 23×T | ** | ||||
| hg19:Y:7256140-G-T hg38:Y:7388099-G-T | ** | ||||||
| hg19:Y:4502945-G-T hg38:Y:4634904-G-T | ** | ||||||
| hg19:Y:14823386-G-GTT hg38:Y:12711453-G-GTT | 12×T | ** | |||||
| hg19:Y:24254144-AC-A hg38:Y:22107997-AC-A | P3_b1 | ** | |||||
| hg38:Y:10754921-C-G | ** | ||||||
| hg38:Y:10792762-C-T | ** | ||||||
| hg38:Y:10999583-C-G | ** | ||||||
| hg38:Y:10999601-T-G | ** | ||||||
| hg38:Y:10999616-C-T | ** | ||||||
| hg38:Y:10999991-T-C | ** | ||||||
| hg19:Y:28792967-G-T hg38:Y:26646820-G-T | ** | ||||||
| hg38:Y:10792735-T-C | ** | ||||||
| hg19:Y:13895875-C-A hg38:Y:11775169-C-A | ** | ||||||
| hg19:Y:13466471-T-C hg38:Y:11310795-T-C | F18172 | ** | |||||
| hg19:Y:18628199-C-A hg38:Y:16516319-C-A | ** | ||||||
| hg38:Y:10692158-T-A | ** | ||||||
| hg38:Y:10754981-C-G | ** | ||||||
| hg19:Y:21306635-G-A hg38:Y:19144749-G-A | ** | ||||||
| hg19:Y:24295368-CA-C hg38:Y:22149221-CA-C | P3_t1 | ** | |||||
| hg19:Y:23272445-C-A hg38:Y:21110559-C-A | ** | ||||||
| hg19:Y:7135175-A-C hg38:Y:7267134-A-C | ** | ||||||
| hg19:Y:7134701-C-A hg38:Y:7266660-C-A | ** | ||||||
| hg19:Y:13919266-C-A hg38:Y:11798560-C-A | ** | ||||||
| hg38:Y:10754976-C-T | ** | ||||||
| hg38:Y:10999903-C-A | ** | ||||||
| hg38:Y:10632644-C-A | ** | ||||||
| hg19:Y:6916203-C-A hg38:Y:7048162-C-A | ** | ||||||
| hg19:Y:7236624-T-C hg38:Y:7368583-T-C | ** | ||||||
| hg19:Y:8661580-C-A hg38:Y:8793539-C-A | ** | ||||||
| hg19:Y:15622448-A-C hg38:Y:13510568-A-C | ** | ||||||
| hg19:Y:13213962-A-T hg38:Y:11058286-A-T | ** | ||||||
| hg19:Y:22447710-T-A hg38:Y:20285824-T-A | DYZ19 | ** | |||||
| hg38:Y:10934853-C-T | ** | ||||||
| hg19:Y:5185499-C-A hg38:Y:5317458-C-A | ** | ||||||
| hg38:Y:56828910-A-ATTCCT | ** | ||||||
| hg19:Y:21681654-C-A hg38:Y:19519768-C-A | ** | ||||||
| hg19:Y:18859229-C-A hg38:Y:16747349-C-A | ** | ||||||
| hg19:Y:14826548-GTTTTT-G hg38:Y:12714615-GTTTTT-G | 19×T | ** | |||||
| hg38:Y:10796670-T-A | ** | ||||||
| hg19:Y:28802596-T-G hg38:Y:26656449-T-G | ** | ||||||
| hg38:Y:11643717-T-C | DYZ17 | ** | |||||
| hg19:Y:23123233-C-A hg38:Y:20961347-C-A | ** | ||||||
| hg19:Y:15368744-C-A hg38:Y:13256864-C-A | ** | ||||||
| hg19:Y:16165143-GA-G hg38:Y:14053263-GA-G | P8_Dst | ** | |||||
| hg19:Y:7363969-C-A hg38:Y:7495928-C-A | ** | ||||||
| hg19:Y:15622446-A-C hg38:Y:13510566-A-C | ** | ||||||
| hg19:Y:6997004-TAA-T hg38:Y:7128963-TAA-T | 12×A | ** | |||||
| hg19:Y:23052564-G-C hg38:Y:20890678-G-C | ** | ||||||
| hg38:Y:10992260-C-G | ** | ||||||
| hg19:Y:21334742-T-G hg38:Y:19172856-T-G | ** | ||||||
| hg19:Y:13453193-C-A hg38:Y:11297517-C-A | ** | ||||||
| hg38:Y:10669534-C-A | ** | ||||||
| hg19:Y:14754067-C-CTT hg38:Y:12642136-C-CTT | 27×T | ** | |||||
| hg19:Y:14802810-C-A hg38:Y:12690881-C-A | ** | ||||||
| hg19:Y:24577879-A-AC hg38:Y:22431732-A-AC | P3_t2 | ** | |||||
| hg19:Y:2843975-T-G hg38:Y:2975934-T-G | ** | ||||||
| hg38:Y:10689034-A-T | ** | ||||||
| hg38:Y:10689043-C-A | ** | ||||||
| hg38:Y:10689054-AC-A | ** | ||||||
| hg38:Y:10689059-A-C | ** | ||||||
| hg38:Y:10689062-C-T | ** | ||||||
| hg19:Y:15347001-C-A hg38:Y:13235120-C-A | ** | ||||||
| hg19:Y:8694098-C-A hg38:Y:8826057-C-A | ** | ||||||
| hg38:Y:10821922-C-A | ** | ||||||
| hg19:Y:16783572-C-CA hg38:Y:14671692-C-CA | ** | ||||||
| hg38:Y:10887978-A-ACTT | ** | ||||||
| hg38:Y:10887981-CCAT-C | ** | ||||||
| hg38:Y:10887993-A-T | ** | ||||||
| hg19:Y:13447122-C-T hg38:Y:11291446-C-T | BY49647 | ** | |||||
| hg19:Y:15565440-C-A hg38:Y:13453560-C-A | ** | ||||||
| hg19:Y:13466452-G-T hg38:Y:11310776-G-T | ** | ||||||
| hg38:Y:10880369-C-T | ** | ||||||
| hg19:Y:20958839-G-T hg38:Y:18796953-G-T | P4_Dst | ** | |||||
| hg19:Y:14506915-C-A hg38:Y:12395120-C-A | ** | ||||||
| hg38:Y:10899114-C-A | ** | ||||||
| hg19:Y:22996880-C-A hg38:Y:20834994-C-A | ** | ||||||
| hg19:Y:16491560-C-A hg38:Y:14379680-C-A | ** | ||||||
| hg19:Y:19007748-G-C hg38:Y:16895868-G-C | ** | ||||||
| hg19:Y:22345737-C-T hg38:Y:20183851-C-T | DYZ19 | ** | |||||
| hg38:Y:10937504-C-G | ** | ||||||
| hg19:Y:19563076-C-A hg38:Y:17451196-C-A | ** | ||||||
| hg38:Y:10987528-C-A | ** | ||||||
| hg19:Y:6280426-A-T hg38:Y:6412385-A-T | IR3_Dst | ** | |||||
| hg19:Y:18930076-C-A hg38:Y:16818196-C-A | ** | ||||||
| hg19:Y:9750110-A-T hg38:Y:9912501-A-T | ** | ||||||
| hg19:Y:9750112-A-AT hg38:Y:9912503-A-AT | ** | ||||||
| hg19:Y:17276156-C-A hg38:Y:15164276-C-A | ** | ||||||
| hg38:Y:10999955-ATTCCG-A | ** | ||||||
| hg19:Y:22660456-C-A hg38:Y:20498570-C-A | ** | ||||||
| hg19:Y:14216372-C-A hg38:Y:12095666-C-A | ** | ||||||
| hg19:Y:17045035-C-A hg38:Y:14933155-C-A | ** | ||||||
| hg19:Y:22208900-C-A hg38:Y:20047014-C-A | ** | ||||||
| hg38:Y:10899077-TC-T | ** | ||||||
| hg19:Y:13453247-T-C hg38:Y:11297571-T-C | ** | ||||||
| hg19:Y:13935582-C-A hg38:Y:11814876-C-A | ** | ||||||
| hg38:Y:11015306-T-C | ** | ||||||
| hg38:Y:11015310-T-A | ** | ||||||
| hg38:Y:11015333-G-C | ** | ||||||
| hg38:Y:11015343-T-C | ** | ||||||
| hg38:Y:11015348-C-G | ** | ||||||
| hg38:Y:11015362-A-G | ** | ||||||
| hg38:Y:11015366-T-A | ** | ||||||
| hg38:Y:11015372-C-T | ** | ||||||
| hg38:Y:11015378-G-A | ** | ||||||
| hg38:Y:11015384-A-G | ** | ||||||
| hg38:Y:11015401-C-T | ** | ||||||
| hg19:Y:13870540-C-A hg38:Y:11749834-C-A | ** | ||||||
| hg38:Y:10987516-T-A | ** | ||||||
| hg19:Y:26154554-T-C hg38:Y:24008407-T-C | P1_Y1 | ** | |||||
| hg19:Y:18169648-C-A hg38:Y:16057768-C-A | ** | ||||||
| hg19:Y:3550597-AA-C hg38:Y:3682556-AA-C | ** | ||||||
| hg38:Y:10661175-G-T | ** | ||||||
| hg19:Y:8673183-C-A hg38:Y:8805142-C-A | ** | ||||||
| hg19:Y:28818313-A-G hg38:Y:26672166-A-G | ** | ||||||
| hg38:Y:10987452-TCCCTA-T | ** | ||||||
| hg19:Y:7709007-C-A hg38:Y:7840966-C-A | ** | ||||||
| hg19:Y:2845263-T-G hg38:Y:2977222-T-G | ** | ||||||
| hg38:Y:10999908-C-G | ** | ||||||
| hg19:Y:21220951-C-A hg38:Y:19059065-C-A | ** | ||||||
| hg19:Y:13838494-A-G hg38:Y:11717788-A-G | DYZ17 | ** | |||||
| hg19:Y:3279414-C-A hg38:Y:3411373-C-A | ** | ||||||
| hg19:Y:13456383-GATTCC-G hg38:Y:11300707-GATTCC-G | ** | ||||||
| hg19:Y:9980495-C-A hg38:Y:10142886-C-A | ** | ||||||
| hg19:Y:13236671-C-A hg38:Y:11080995-C-A | FGC53643 | ** | |||||
| hg19:Y:16783554-C-T hg38:Y:14671674-C-T | ** | ||||||
| hg19:Y:8719086-C-A hg38:Y:8851045-C-A | ** | ||||||
| hg19:Y:15770489-G-T hg38:Y:13658609-G-T | ** | ||||||
| hg19:Y:16515891-T-A hg38:Y:14404011-T-A | ** | ||||||
| hg19:Y:16767152-C-A hg38:Y:14655272-C-A | ** | ||||||
| hg19:Y:8705885-A-G hg38:Y:8837844-A-G | ** | ||||||
| hg19:Y:8705887-A-G hg38:Y:8837846-A-G | ** | ||||||
| hg19:Y:23371928-C-A hg38:Y:21210042-C-A | ** | ||||||
| hg19:Y:18636835-A-G hg38:Y:16524955-A-G | ** | ||||||
| hg19:Y:13642697-C-T hg38:Y:11487021-C-T | FT358050 | ** | |||||
| hg38:Y:10692104-CCACTCTGCCT-C | ** | ||||||
| hg19:Y:14376187-C-A hg38:Y:12255483-C-A | ** | ||||||
| hg19:Y:6734795-C-A hg38:Y:6866754-C-A | ** | ||||||
| hg38:Y:10893142-C-A | ** | ||||||
| hg19:Y:15410558-C-T hg38:Y:13298678-C-T | ** | ||||||
| hg19:Y:2774057-C-A hg38:Y:2906016-C-A | ** | ||||||
| hg19:Y:7160449-A-G hg38:Y:7292408-A-G | ** | ||||||
| hg19:Y:15894666-C-A hg38:Y:13782786-C-A | ** | ||||||
| hg19:Y:28515292-C-A hg38:Y:26369145-C-A | ** | ||||||
| hg19:Y:14034877-C-A hg38:Y:11914171-C-A | ** | ||||||
| hg19:Y:6780837-C-A hg38:Y:6912796-C-A | ** | ||||||
| hg19:Y:14588913-C-A hg38:Y:12477113-C-A | ** | ||||||
| hg19:Y:27860972-T-G hg38:Y:25714825-T-G | P1_Y2 | ** | |||||
| hg19:Y:19510264-CTTTTT-C hg38:Y:17398384-CTTTTT-C | 27×T | ** | |||||
| hg38:Y:10748037-A-C | ** | ||||||
| hg19:Y:6454657-C-A hg38:Y:6586616-C-A | ** | ||||||
| hg19:Y:23415306-A-T hg38:Y:21253420-A-T | ** | ||||||
| hg19:Y:14299990-C-A hg38:Y:12179284-C-A | ** | ||||||
| hg19:Y:3650959-G-T hg38:Y:3782918-G-T | ** | ||||||
| hg38:Y:10958945-G-T | ** | ||||||
| hg19:Y:20340158-TTTTC-T hg38:Y:18178272-TTTTC-T | P5_Dst | ** | |||||
| hg38:Y:10792757-C-T | ** | ||||||
| hg19:Y:28641015-C-A hg38:Y:26494868-C-A | ** | ||||||
| hg19:Y:14788164-T-C hg38:Y:12676235-T-C | ** | ||||||
| hg19:Y:7383727-C-A hg38:Y:7515686-C-A | ** | ||||||
| hg19:Y:7199396-C-A hg38:Y:7331355-C-A | ** | ||||||
| hg19:Y:13453178-C-A hg38:Y:11297502-C-A | ** | ||||||
| hg19:Y:13453198-C-CG hg38:Y:11297522-C-CG | ** | ||||||
| hg19:Y:13453211-T-A hg38:Y:11297535-T-A | ** | ||||||
| hg19:Y:3717265-C-A hg38:Y:3849224-C-A | ** | ||||||
| hg38:Y:10987426-TTCCCTTCTAC-T | ** | ||||||
| hg38:Y:10987523-C-G | ** | ||||||
| hg38:Y:10943167-C-A | ** | ||||||
| hg19:Y:18581332-C-A hg38:Y:16469452-C-A | ** | ||||||
| hg19:Y:2772616-A-C hg38:Y:2904575-A-C | BY56350 | ** | |||||
| hg19:Y:3060950-C-A hg38:Y:3192909-C-A | ** | ||||||
| hg19:Y:3436570-G-T hg38:Y:3568529-G-T | ** | ||||||
| hg19:Y:4062703-C-A hg38:Y:4194662-C-A | ** | ||||||
| hg19:Y:4215760-T-C hg38:Y:4347719-T-C | ** | ||||||
| hg19:Y:4740801-C-A hg38:Y:4872760-C-A | ** | ||||||
| hg19:Y:4769514-G-T hg38:Y:4901473-G-T | ** | ||||||
| hg19:Y:5248013-C-A hg38:Y:5379972-C-A | ** | ||||||
| hg19:Y:5412130-T-G hg38:Y:5544089-T-G | ** | ||||||
| hg19:Y:6457943-C-A hg38:Y:6589902-C-A | ** | ||||||
| hg19:Y:6666297-G-T hg38:Y:6798256-G-T | ** | ||||||
| hg19:Y:6729933-A-G hg38:Y:6861892-A-G | ** | ||||||
| hg19:Y:6916813-C-A hg38:Y:7048772-C-A | ** | ||||||
| hg19:Y:7008414-A-G hg38:Y:7140373-A-G | ** | ||||||
| hg19:Y:7199757-C-T hg38:Y:7331716-C-T | ** | ||||||
| hg19:Y:7264696-A-C hg38:Y:7396655-A-C | ** | ||||||
| hg19:Y:7318652-T-A hg38:Y:7450611-T-A | ** | ||||||
| hg19:Y:7455037-T-TA hg38:Y:7586996-T-TA | IR1_L | ** | |||||
| hg19:Y:8142793-A-C hg38:Y:8274752-A-C | ** | ||||||
| hg19:Y:8166992-C-A hg38:Y:8298951-C-A | ** | ||||||
| hg19:Y:8350342-C-A hg38:Y:8482301-C-A | ** | ||||||
| hg19:Y:8750524-CT-C hg38:Y:8882483-CT-C | ** | ||||||
| hg19:Y:8851770-C-A hg38:Y:8983729-C-A | ** | ||||||
| hg19:Y:8851841-C-A hg38:Y:8983800-C-A | ** | ||||||
| hg19:Y:8901280-A-G hg38:Y:9033239-A-G | ** | ||||||
| hg19:Y:8977001-T-C hg38:Y:9139392-T-C | ** | ||||||
| hg19:Y:9312915-G-A hg38:Y:9475306-G-A | ** | ||||||
| hg19:Y:9427657-G-T hg38:Y:9590048-G-T | ** | ||||||
| hg19:Y:9577032-A-T hg38:Y:9739423-A-T | IR3_Prx | ** | |||||
| hg19:Y:9639202-T-A hg38:Y:9801593-T-A | IR3_Prx | ** | |||||
| hg19:Y:9977750-C-A hg38:Y:10140141-C-A | ** | ||||||
| hg19:Y:10037781-C-G hg38:Y:10200172-C-G | ** | ||||||
| hg19:Y:10093775-G-A hg38:Y:10256166-G-A | ** | ||||||
| hg38:Y:10660421-C-A | ** | ||||||
| hg38:Y:10661339-T-C | ** | ||||||
| hg38:Y:10669473-C-A | ** | ||||||
| hg38:Y:10748904-C-T | ** | ||||||
| hg38:Y:10763253-T-C | ** | ||||||
| hg38:Y:10763270-C-T | ** | ||||||
| hg38:Y:10792733-C-A | ** | ||||||
| hg38:Y:10796642-C-CA | ** | ||||||
| hg38:Y:10796645-TC-T | ** | ||||||
| hg38:Y:10796661-C-CT | ** | ||||||
| hg38:Y:10796662-CA-C | ** | ||||||
| hg38:Y:10815111-T-A | ** | ||||||
| hg38:Y:10815143-CTA-C | ** | ||||||
| hg38:Y:10815148-CCAT-C | ** | ||||||
| hg38:Y:10875122-A-C | ** | ||||||
| hg38:Y:10875126-T-A | ** | ||||||
| hg38:Y:10880371-C-T | ** | ||||||
| hg38:Y:10883140-T-A | ** | ||||||
| hg38:Y:10883175-T-C | ** | ||||||
| hg38:Y:10893096-A-C | ** | ||||||
| hg38:Y:10922428-C-A | ** | ||||||
| hg38:Y:10932819-C-A | ** | ||||||
| hg38:Y:10958573-C-T | ** | ||||||
| hg38:Y:10995729-C-A | ** | ||||||
| hg38:Y:10999631-ATT-C | ** | ||||||
| hg38:Y:11015355-C-A | ** | ||||||
| hg38:Y:11015399-C-G | ** | ||||||
| hg19:Y:13205477-G-T hg38:Y:11049801-G-T | ** | ||||||
| hg19:Y:13205497-C-T hg38:Y:11049821-C-T | ** | ||||||
| hg19:Y:13239414-G-A hg38:Y:11083738-G-A | ** | ||||||
| hg19:Y:13273763-C-A hg38:Y:11118087-C-A | ** | ||||||
| hg19:Y:13454429-T-G hg38:Y:11298753-T-G | ** | ||||||
| hg19:Y:13466446-T-G hg38:Y:11310770-T-G | ** | ||||||
| hg19:Y:13489052-G-A hg38:Y:11333376-G-A | ** | ||||||
| hg19:Y:13523541-T-C hg38:Y:11367865-T-C | ** | ||||||
| hg19:Y:13644943-C-A hg38:Y:11489267-C-A | ** | ||||||
| hg19:Y:13728111-G-T hg38:Y:11572435-G-T | DYZ17 | ** | |||||
| hg19:Y:13801379-G-A hg38:Y:11680673-G-A | DYZ17 | ** | |||||
| hg19:Y:13838504-A-C hg38:Y:11717798-A-C | DYZ17 | ** | |||||
| hg19:Y:13838524-A-G hg38:Y:11717818-A-G | DYZ17 | ** | |||||
| hg19:Y:13855021-G-C hg38:Y:11734315-G-C | DYZ17 | ** | |||||
| hg19:Y:14027164-A-C hg38:Y:11906458-A-C | ** | ||||||
| hg19:Y:14032771-C-A hg38:Y:11912065-C-A | ** | ||||||
| hg19:Y:14088678-C-A hg38:Y:11967972-C-A | ** | ||||||
| hg19:Y:14153198-C-G hg38:Y:12032492-C-G | ** | ||||||
| hg19:Y:14186866-T-TA hg38:Y:12066160-T-TA | ** | ||||||
| hg19:Y:14188131-T-G hg38:Y:12067425-T-G | ** | ||||||
| hg19:Y:14224375-C-A hg38:Y:12103669-C-A | ** | ||||||
| hg19:Y:14232938-C-A hg38:Y:12112232-C-A | ** | ||||||
| hg19:Y:14252124-C-A hg38:Y:12131418-C-A | ** | ||||||
| hg19:Y:14390658-A-C hg38:Y:12269954-A-C | ** | ||||||
| hg19:Y:14391953-A-C hg38:Y:12271249-A-C | ** | ||||||
| hg19:Y:14432446-A-G hg38:Y:12311719-A-G | ** | ||||||
| hg19:Y:14453736-A-T hg38:Y:12333009-A-T | ** | ||||||
| hg38:Y:12378476-G-T | ** | ||||||
| hg19:Y:14592074-C-A hg38:Y:12480274-C-A | ** | ||||||
| hg19:Y:14702158-C-A hg38:Y:12590224-C-A | ** | ||||||
| hg19:Y:14788190-A-G hg38:Y:12676261-A-G | ** | ||||||
| hg19:Y:14933755-AT-A hg38:Y:12821820-AT-A | ** | ||||||
| hg19:Y:15114917-A-T hg38:Y:13003004-A-T | ** | ||||||
| hg19:Y:15257277-G-AT hg38:Y:13145361-G-AT | ** | ||||||
| hg19:Y:15322520-C-A hg38:Y:13210638-C-A | ** | ||||||
| hg19:Y:15393871-C-A hg38:Y:13281991-C-A | ** | ||||||
| hg19:Y:15395297-C-A hg38:Y:13283417-C-A | ** | ||||||
| hg19:Y:15410595-C-T hg38:Y:13298715-C-T | ** | ||||||
| hg19:Y:15660199-C-A hg38:Y:13548319-C-A | ** | ||||||
| hg19:Y:15681314-T-G hg38:Y:13569434-T-G | ** | ||||||
| hg19:Y:15687176-C-A hg38:Y:13575296-C-A | ** | ||||||
| hg19:Y:15700381-A-T hg38:Y:13588501-A-T | ** | ||||||
| hg19:Y:15731345-A-C hg38:Y:13619465-A-C | ** | ||||||
| hg19:Y:15766989-C-A hg38:Y:13655109-C-A | ** | ||||||
| hg19:Y:15841838-A-G hg38:Y:13729958-A-G | ** | ||||||
| hg19:Y:15864312-C-A hg38:Y:13752432-C-A | ** | ||||||
| hg19:Y:16042020-G-A hg38:Y:13930140-G-A | ** | ||||||
| hg19:Y:16042107-C-A hg38:Y:13930227-C-A | ** | ||||||
| hg19:Y:16085281-C-A hg38:Y:13973401-C-A | ** | ||||||
| hg19:Y:16246302-C-A hg38:Y:14134422-C-A | ** | ||||||
| hg19:Y:16607850-A-T hg38:Y:14495970-A-T | ** | ||||||
| hg19:Y:16763739-C-A hg38:Y:14651859-C-A | ** | ||||||
| hg19:Y:16783547-A-C hg38:Y:14671667-A-C | ** | ||||||
| hg19:Y:16834580-T-A hg38:Y:14722700-T-A | ** | ||||||
| hg19:Y:17004688-C-A hg38:Y:14892808-C-A | ** | ||||||
| hg19:Y:17028772-A-G hg38:Y:14916892-A-G | ** | ||||||
| hg19:Y:17213442-C-G hg38:Y:15101562-C-G | ** | ||||||
| hg19:Y:17280042-C-A hg38:Y:15168162-C-A | ** | ||||||
| hg19:Y:17319819-C-A hg38:Y:15207939-C-A | ** | ||||||
| hg19:Y:17638386-T-G hg38:Y:15526506-T-G | ** | ||||||
| hg19:Y:17648507-T-G hg38:Y:15536627-T-G | ** | ||||||
| hg19:Y:17813239-C-A hg38:Y:15701359-C-A | ** | ||||||
| hg19:Y:17883928-G-T hg38:Y:15772048-G-T | ** | ||||||
| hg19:Y:17978432-C-A hg38:Y:15866552-C-A | ** | ||||||
| hg19:Y:18241736-C-A hg38:Y:16129856-C-A | ** | ||||||
| hg19:Y:18280205-AT-A hg38:Y:16168325-AT-A | P6_Prx | ** | |||||
| hg19:Y:18627895-T-A hg38:Y:16516015-T-A | ** | ||||||
| hg19:Y:18636840-C-G hg38:Y:16524960-C-G | ** | ||||||
| hg19:Y:18636848-CAG-C hg38:Y:16524968-CAG-C | ** | ||||||
| hg19:Y:18648687-AT-A hg38:Y:16536807-AT-A | 8×T | ** | |||||
| hg19:Y:18724719-A-C hg38:Y:16612839-A-C | ** | ||||||
| hg19:Y:18737894-C-A hg38:Y:16626014-C-A | ** | ||||||
| hg19:Y:19007743-T-C hg38:Y:16895863-T-C | ** | ||||||
| hg19:Y:19042635-A-C hg38:Y:16930755-A-C | ** | ||||||
| hg19:Y:19081184-TA-T hg38:Y:16969304-TA-T | ** | ||||||
| hg19:Y:19226263-C-A hg38:Y:17114383-C-A | ** | ||||||
| hg19:Y:19532938-A-G hg38:Y:17421058-A-G | ** | ||||||
| hg19:Y:19536772-C-A hg38:Y:17424892-C-A | ** | ||||||
| hg19:Y:19676123-C-G hg38:Y:17564243-C-G | P5_Prx | ** | |||||
| hg19:Y:20252914-G-T hg38:Y:18091028-G-T | P5_Dst | ** | |||||
| hg19:Y:20712322-G-A hg38:Y:18550436-G-A | P4_Prx | ** | |||||
| hg19:Y:21136702-C-A hg38:Y:18974816-C-A | ** | ||||||
| hg19:Y:21190374-G-A hg38:Y:19028488-G-A | ** | ||||||
| hg19:Y:21207648-T-G hg38:Y:19045762-T-G | ** | ||||||
| hg19:Y:21207681-T-G hg38:Y:19045795-T-G | ** | ||||||
| hg19:Y:21220401-C-A hg38:Y:19058515-C-A | ** | ||||||
| hg19:Y:21279134-G-C hg38:Y:19117248-G-C | ** | ||||||
| hg19:Y:21443861-T-C hg38:Y:19281975-T-C | ** | ||||||
| hg19:Y:21855920-A-C hg38:Y:19694034-A-C | ** | ||||||
| hg19:Y:22001854-G-A hg38:Y:19839968-G-A | ** | ||||||
| hg19:Y:22077079-T-C hg38:Y:19915193-T-C | ** | ||||||
| hg19:Y:22078167-T-C hg38:Y:19916281-T-C | ** | ||||||
| hg19:Y:22125630-C-A hg38:Y:19963744-C-A | ** | ||||||
| hg19:Y:22155434-C-A hg38:Y:19993548-C-A | ** | ||||||
| hg19:Y:22212140-C-A hg38:Y:20050254-C-A | ** | ||||||
| hg19:Y:22333434-AG-A hg38:Y:20171548-AG-A | DYZ19 | ** | |||||
| hg19:Y:22527214-G-T hg38:Y:20365328-G-T | ** | ||||||
| hg19:Y:22527222-T-C hg38:Y:20365336-T-C | ** | ||||||
| hg19:Y:22614118-G-A hg38:Y:20452232-G-A | ** | ||||||
| hg19:Y:22793616-C-A hg38:Y:20631730-C-A | ** | ||||||
| hg19:Y:22808993-A-C hg38:Y:20647107-A-C | ** | ||||||
| hg19:Y:22875290-C-A hg38:Y:20713404-C-A | ** | ||||||
| hg19:Y:23052556-G-C hg38:Y:20890670-G-C | ** | ||||||
| hg19:Y:23100000-C-A hg38:Y:20938114-C-A | ** | ||||||
| hg19:Y:23264333-C-T hg38:Y:21102447-C-T | ** | ||||||
| hg19:Y:23277847-T-A hg38:Y:21115961-T-A | ** | ||||||
| hg19:Y:23371504-A-G hg38:Y:21209618-A-G | ** | ||||||
| hg19:Y:23377426-CAGGG-C hg38:Y:21215540-CAGGG-C | ** | ||||||
| hg19:Y:23422845-C-A hg38:Y:21260959-C-A | ** | ||||||
| hg19:Y:26161174-A-C hg38:Y:24015027-A-C | P1_Y1 | ** | |||||
| hg19:Y:27819777-T-G hg38:Y:25673630-T-G | P1_Y2 | ** | |||||
| hg19:Y:28469409-T-C hg38:Y:26323262-T-C | ** | ||||||
| hg19:Y:28686372-C-A hg38:Y:26540225-C-A | ** | ||||||
| hg19:Y:28714456-T-C hg38:Y:26568309-T-C | ** | ||||||
| hg19:Y:28744902-G-A hg38:Y:26598755-G-A | ** | ||||||
| hg19:Y:28802561-A-C hg38:Y:26656414-A-C | ** | ||||||
| hg19:Y:21049870-GGA-G hg38:Y:18887984-GGA-G | 12×GA | *** | |||||
| hg19:Y:14168426-AT-A hg38:Y:12047720-AT-A | A848 | BY11750 | 9×T | *** | |||
| hg19:Y:17223343-G-GT hg38:Y:15111463-G-GT | 9×T | *** | |||||
| hg19:Y:5393374-A-G hg38:Y:5525333-A-G | *** | ||||||
| hg19:Y:9424598-GAAAAA-G hg38:Y:9586989-GAAAAA-G | 16×A | *** | |||||
| hg19:Y:13466423-A-T hg38:Y:11310747-A-T | *** | ||||||
| hg19:Y:13808699-G-GGAAGC hg38:Y:11687993-G-GGAAGC | DYZ17 | *** | |||||
| hg19:Y:13808714-G-T hg38:Y:11688008-G-T | DYZ17 | *** | |||||
| hg19:Y:13808759-G-T hg38:Y:11688053-G-T | DYZ17 | *** | |||||
| hg38:Y:10808578-T-C | *** | ||||||
| hg19:Y:21146275-CTT-C,CT hg38:Y:18984389-CTT-C,CT | 17×T | *** | |||||
| hg38:Y:10807241-T-C | *** | ||||||
| hg19:Y:23416511-CTTTT-C hg38:Y:21254625-CTTTT-C | 16×T | *** | |||||
| hg38:Y:10986796-C-G | *** | ||||||
| hg19:Y:25592896-CTCTC-C,CTA hg38:Y:23446749-CTCTC-C,CTA | P1_gr1 | *** | |||||
| hg19:Y:5393441-C-A hg38:Y:5525400-C-A | *** | ||||||
| hg19:Y:2860022-CTTT-C hg38:Y:2991981-CTTT-C | 14×T | *** | |||||
| hg19:Y:13447335-TCCACTCCACTCCACT-T,TCCACTCCACTCCACA hg38:Y:11291659-TCCACTCCACTCCACT-T,TCCACTCCACTCCACA | *** | ||||||
| hg19:Y:15656898-C-A hg38:Y:13545018-C-A | *** | ||||||
| hg19:Y:17409041-C-A hg38:Y:15297161-C-A | *** | ||||||
| hg19:Y:7991069-C-A hg38:Y:8123028-C-A | FT123829 | *** | |||||
| hg19:Y:13457968-CTCCACTCCGT-C hg38:Y:11302292-CTCCACTCCGT-C | *** | ||||||
| hg19:Y:5644889-C-A hg38:Y:5776848-C-A | *** | ||||||
| hg38:Y:10808581-C-T | *** | ||||||
| hg19:Y:8702849-C-A hg38:Y:8834808-C-A | *** | ||||||
| hg19:Y:13466426-C-A,T hg38:Y:11310750-C-A,T | *** | ||||||
| hg19:Y:5393383-A-C hg38:Y:5525342-A-C | *** | ||||||
| hg19:Y:14539525-G-T hg38:Y:12427726-G-T | *** | ||||||
| hg19:Y:21167076-GAAA-G hg38:Y:19005190-GAAA-G | 14×A | *** | |||||
| hg19:Y:15502036-G-GT hg38:Y:13390156-G-GT | 9×T | *** | |||||
| hg19:Y:5782130-C-A hg38:Y:5914089-C-A | *** | ||||||
| hg38:Y:10803766-C-A | *** | ||||||
| hg19:Y:23446217-C-A hg38:Y:21284331-C-A | *** | ||||||
| hg19:Y:5189797-C-A hg38:Y:5321756-C-A | *** | ||||||
| hg19:Y:5294143-T-C hg38:Y:5426102-T-C | *** | ||||||
| hg19:Y:5644863-C-A hg38:Y:5776822-C-A | *** | ||||||
| hg19:Y:6817101-T-A hg38:Y:6949060-T-A | *** | ||||||
| hg19:Y:6926009-C-A hg38:Y:7057968-C-A | *** | ||||||
| hg19:Y:7053163-CT-C hg38:Y:7185122-CT-C | *** | ||||||
| hg19:Y:7236789-CA-C,CAA hg38:Y:7368748-CA-C,CAA | 13×A | *** | |||||
| hg19:Y:7312172-C-A hg38:Y:7444131-C-A | *** | ||||||
| hg19:Y:7991087-C-A hg38:Y:8123046-C-A | *** | ||||||
| hg19:Y:8650031-AG-A hg38:Y:8781990-AG-A | *** | ||||||
| hg19:Y:8650043-AG-A hg38:Y:8782002-AG-A | *** | ||||||
| hg19:Y:9437419-A-C hg38:Y:9599810-A-C | *** | ||||||
| hg19:Y:9510006-A-G hg38:Y:9672397-A-G | *** | ||||||
| hg38:Y:11014476-C-A | *** | ||||||
| hg19:Y:13264567-T-G hg38:Y:11108891-T-G | *** | ||||||
| hg19:Y:13458022-A-G hg38:Y:11302346-A-G | *** | ||||||
| hg19:Y:14099468-C-A hg38:Y:11978762-C-A | *** | ||||||
| hg19:Y:14236026-CAAAA-C,CA hg38:Y:12115320-CAAAA-C,CA | 16×A | *** | |||||
| hg19:Y:14294342-G-GA,GAA hg38:Y:12173636-G-GA,GAA | 13×A | *** | |||||
| hg19:Y:14517897-C-A hg38:Y:12406098-C-A | *** | ||||||
| hg19:Y:14548757-C-A hg38:Y:12436958-C-A | *** | ||||||
| hg19:Y:15579981-C-A hg38:Y:13468101-C-A | *** | ||||||
| hg19:Y:15951756-C-A hg38:Y:13839876-C-A | *** | ||||||
| hg19:Y:16044024-C-A hg38:Y:13932144-C-A | *** | ||||||
| hg19:Y:16292832-T-C hg38:Y:14180952-T-C | *** | ||||||
| hg19:Y:16759913-C-A hg38:Y:14648033-C-A | *** | ||||||
| hg19:Y:16786249-C-A hg38:Y:14674369-C-A | *** | ||||||
| hg19:Y:16969400-C-A hg38:Y:14857520-C-A | 11×T | *** | |||||
| hg19:Y:17349455-C-A hg38:Y:15237575-C-A | *** | ||||||
| hg19:Y:17394670-G-A hg38:Y:15282790-G-A | *** | ||||||
| hg19:Y:18254815-G-A hg38:Y:16142935-G-A | *** | ||||||
| hg19:Y:18581904-C-CAA hg38:Y:16470024-C-CAA | 10×A | *** | |||||
| hg19:Y:21151493-T-TA hg38:Y:18989607-T-TA | 8×A | *** | |||||
| hg19:Y:21561275-C-A hg38:Y:19399389-C-A | *** | ||||||
| hg19:Y:21963557-C-A hg38:Y:19801671-C-A | *** | ||||||
| hg19:Y:22019213-A-AT hg38:Y:19857327-A-AT | 9×T | *** | |||||
| hg19:Y:22023537-C-A hg38:Y:19861651-C-A | *** | ||||||
| hg19:Y:22035930-T-C hg38:Y:19874044-T-C | *** | ||||||
| hg19:Y:23272412-C-T hg38:Y:21110526-C-T | *** | ||||||
| hg19:Y:23272490-C-A hg38:Y:21110604-C-A | *** | ||||||
| hg19:Y:23380229-G-T hg38:Y:21218343-G-T | *** | ||||||
| hg19:Y:23452468-C-T hg38:Y:21290582-C-T | *** | ||||||
| hg19:Y:24876029-A-G hg38:Y:22729882-A-G | g1 | *** | |||||
| hg19:Y:28792962-G-T hg38:Y:26646815-G-T | *** | ||||||
| hg38:Y:56832784-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: IN23640 | 9106489 | 7528382 | 7497808 |
| Used in age calculations | 9106489 | 7528382 | 7497808 |
| Counts of SNPs | 1 | 1 |
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