McAllister
BigY3: MK11831, BigY2: MK11831MDKA Birth:
ScotlandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 MK11831 | BigY2 MK11831 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:22245793-C-A hg38:Y:20083907-C-A | DYZ19 | A+ | ||||||
| hg19:Y:8565786-A-AT hg38:Y:8697745-A-AT | 10×T | A* | ||||||
| hg19:Y:3682248-T-A hg38:Y:3814207-T-A | A3180 | A* | ||||||
| hg19:Y:5497651-G-A hg38:Y:5629610-G-A | A* | |||||||
| hg19:Y:3614532-A-G hg38:Y:3746491-A-G | A* | |||||||
| hg19:Y:17198383-C-T hg38:Y:15086503-C-T | BY191094 | Y | Y | + | + | |||
| hg19:Y:14255557-A-C hg38:Y:12134851-A-C | FT93168 | Y | + | |||||
| hg19:Y:6054884-T-C hg38:Y:6186843-T-C | * | |||||||
| hg38:Y:10691344-C-CTCCAT | * | |||||||
| hg19:Y:28809338-A-G hg38:Y:26663191-A-G | * | |||||||
| hg19:Y:19438507-C-A hg38:Y:17326627-C-A | ** | |||||||
| hg19:Y:58976682-CATTCTGCTGA-C hg38:Y:56830535-CATTCTGCTGA-C | ** | |||||||
| hg19:Y:14025608-A-AAGAG hg38:Y:11904902-A-AAGAG | ** | |||||||
| hg19:Y:8170496-G-A hg38:Y:8302455-G-A | Z25915 F14313 | ** | ||||||
| hg19:Y:15604354-CAAAAAA-C hg38:Y:13492474-CAAAAAA-C | 20×A | ** | ||||||
| hg19:Y:13469013-G-A hg38:Y:11313337-G-A | ** | |||||||
| hg19:Y:13488942-G-T hg38:Y:11333266-G-T | ** | |||||||
| hg19:Y:4908175-CAAA-C hg38:Y:5040134-CAAA-C | 17×A | ** | ||||||
| hg19:Y:23831457-C-G hg38:Y:21669571-C-G | ** | |||||||
| hg19:Y:13318027-C-A hg38:Y:11162351-C-A | ** | |||||||
| hg19:Y:7764453-A-AT hg38:Y:7896412-A-AT | 9×T | ** | ||||||
| hg19:Y:18425173-C-A hg38:Y:16313293-C-A | P6_Gap | ** | ||||||
| hg38:Y:10964803-A-T | ** | |||||||
| hg38:Y:10964823-A-T | ** | |||||||
| hg19:Y:14181347-G-T hg38:Y:12060641-G-T | FGC58573 | ** | ||||||
| hg19:Y:27883510-C-A hg38:Y:25737363-C-A | P1_Y2 | ** | ||||||
| hg19:Y:13465890-C-A hg38:Y:11310214-C-A | ** | |||||||
| hg19:Y:17079242-C-A hg38:Y:14967362-C-A | ** | |||||||
| hg19:Y:13489410-T-C hg38:Y:11333734-T-C | ** | |||||||
| hg19:Y:13489412-C-A hg38:Y:11333736-C-A | ** | |||||||
| hg19:Y:17036826-C-A hg38:Y:14924946-C-A | ** | |||||||
| hg19:Y:18923342-GTTTT-G hg38:Y:16811462-GTTTT-G | 18×T | ** | ||||||
| hg19:Y:13489416-G-T hg38:Y:11333740-G-T | ** | |||||||
| hg38:Y:11014476-C-G | ** | |||||||
| hg19:Y:22079822-C-A hg38:Y:19917936-C-A | ** | |||||||
| hg19:Y:13218662-C-A hg38:Y:11062986-C-A | ** | |||||||
| hg19:Y:18856249-C-A hg38:Y:16744369-C-A | ** | |||||||
| hg38:Y:10801647-G-T | ** | |||||||
| hg19:Y:13478400-A-T hg38:Y:11322724-A-T | ** | |||||||
| hg19:Y:13478405-C-G hg38:Y:11322729-C-G | ** | |||||||
| hg19:Y:20669306-C-T hg38:Y:18507420-C-T | P4_Prx | ** | ||||||
| hg19:Y:23272226-C-A hg38:Y:21110340-C-A | ** | |||||||
| hg19:Y:27497031-A-T hg38:Y:25350884-A-T | P1_Y2 | ** | ||||||
| hg19:Y:16354867-G-T hg38:Y:14242987-G-T | ** | |||||||
| hg38:Y:11014511-C-T | ** | |||||||
| hg19:Y:28640447-C-A hg38:Y:26494300-C-A | ** | |||||||
| hg19:Y:13469084-T-C hg38:Y:11313408-T-C | ** | |||||||
| hg38:Y:11015030-C-A | ** | |||||||
| hg38:Y:56827512-C-A | ** | |||||||
| hg38:Y:10926560-T-TCATTC | ** | |||||||
| hg19:Y:24409376-G-T hg38:Y:22263229-G-T | ** | |||||||
| hg19:Y:27583278-G-T hg38:Y:25437131-G-T | P1_Y2 | ** | ||||||
| hg19:Y:7239697-C-A hg38:Y:7371656-C-A | ** | |||||||
| hg19:Y:7364397-C-A hg38:Y:7496356-C-A | ** | |||||||
| hg38:Y:10935573-A-T | ** | |||||||
| hg38:Y:10946708-C-A | ** | |||||||
| hg19:Y:14780876-ATT-A hg38:Y:12668946-ATT-A | 12×T | ** | ||||||
| hg19:Y:17752067-C-A hg38:Y:15640187-C-A | ** | |||||||
| hg19:Y:23831429-G-A hg38:Y:21669543-G-A | ** | |||||||
| hg19:Y:24637481-TG-T hg38:Y:22491334-TG-T | P3_t2 | ** | ||||||
| hg19:Y:15387903-C-A hg38:Y:13276023-C-A | ** | |||||||
| hg19:Y:18942300-C-A hg38:Y:16830420-C-A | ** | |||||||
| hg19:Y:16102018-T-G hg38:Y:13990138-T-G | P8_Prx | 6×TTTTG | ** | |||||
| hg19:Y:14506829-C-A hg38:Y:12395034-C-A | ** | |||||||
| hg38:Y:56830570-C-T | ** | |||||||
| hg19:Y:14985314-C-A hg38:Y:12873382-C-A | ** | |||||||
| hg19:Y:19853730-T-A hg38:Y:17741850-T-A | P5_Prx | ** | ||||||
| hg38:Y:56832132-C-A | ** | |||||||
| hg38:Y:10808616-C-CTTTCT | ** | |||||||
| hg19:Y:4568424-G-T hg38:Y:4700383-G-T | ** | |||||||
| hg19:Y:19130712-C-A hg38:Y:17018832-C-A | ** | |||||||
| hg38:Y:10807098-C-A | ** | |||||||
| hg19:Y:19129602-C-A hg38:Y:17017722-C-A | ** | |||||||
| hg19:Y:22703595-CAAAAAA-C hg38:Y:20541709-CAAAAAA-C | 30×A | ** | ||||||
| hg38:Y:10816582-G-T | ** | |||||||
| hg19:Y:21391671-C-A hg38:Y:19229785-C-A | ** | |||||||
| hg19:Y:24267255-AAT-A hg38:Y:22121108-AAT-A | P3_b1 | ** | ||||||
| hg19:Y:18090094-C-A hg38:Y:15978214-C-A | FT37366 | ** | ||||||
| hg19:Y:5870115-C-A hg38:Y:6002074-C-A | ** | |||||||
| hg19:Y:21709215-A-T hg38:Y:19547329-A-T | ** | |||||||
| hg19:Y:15433041-C-A hg38:Y:13321161-C-A | ** | |||||||
| hg19:Y:23045470-TC-T hg38:Y:20883584-TC-T | ** | |||||||
| hg19:Y:21464419-C-A hg38:Y:19302533-C-A | ** | |||||||
| hg19:Y:14071354-C-CTT hg38:Y:11950648-C-CTT | 25×T | ** | ||||||
| hg38:Y:10935523-T-G | ** | |||||||
| hg19:Y:22995884-C-A hg38:Y:20833998-C-A | ** | |||||||
| hg19:Y:14784872-A-T hg38:Y:12672942-A-T | 18×T | ** | ||||||
| hg19:Y:21200997-C-A hg38:Y:19039111-C-A | ** | |||||||
| hg19:Y:4898114-C-A hg38:Y:5030073-C-A | ** | |||||||
| hg19:Y:13489766-A-T hg38:Y:11334090-A-T | ** | |||||||
| hg38:Y:11014346-C-T | ** | |||||||
| hg19:Y:14464708-CT-C hg38:Y:12343981-CT-C | 9×T | ** | ||||||
| hg19:Y:14607658-G-T hg38:Y:12495860-G-T | ** | |||||||
| hg19:Y:23127979-C-A hg38:Y:20966093-C-A | ** | |||||||
| hg19:Y:8020240-AAAAG-A hg38:Y:8152199-AAAAG-A | ** | |||||||
| hg19:Y:17095253-C-A hg38:Y:14983373-C-A | ** | |||||||
| hg19:Y:28521214-C-A hg38:Y:26375067-C-A | ** | |||||||
| hg19:Y:6426941-C-A hg38:Y:6558900-C-A | ** | |||||||
| hg19:Y:13902215-C-A hg38:Y:11781509-C-A | ** | |||||||
| hg19:Y:16868752-T-C hg38:Y:14756872-T-C | ** | |||||||
| hg19:Y:13469071-A-G hg38:Y:11313395-A-G | ** | |||||||
| hg19:Y:2767758-C-A hg38:Y:2899717-C-A | ** | |||||||
| hg19:Y:17157522-C-A hg38:Y:15045642-C-A | ** | |||||||
| hg38:Y:10934791-G-C | ** | |||||||
| hg19:Y:18670179-T-C hg38:Y:16558299-T-C | ** | |||||||
| hg19:Y:28482976-G-A hg38:Y:26336829-G-A | ** | |||||||
| hg19:Y:21584165-G-A hg38:Y:19422279-G-A | ** | |||||||
| hg19:Y:15712365-C-A hg38:Y:13600485-C-A | ** | |||||||
| hg19:Y:24458693-C-A hg38:Y:22312546-C-A | ** | |||||||
| hg19:Y:22088884-C-A hg38:Y:19926998-C-A | ** | |||||||
| hg38:Y:10668360-C-T | ** | |||||||
| hg38:Y:11656418-C-A | DYZ17 | ** | ||||||
| hg19:Y:15280184-C-A hg38:Y:13168283-C-A | ** | |||||||
| hg19:Y:23465766-G-T hg38:Y:21303880-G-T | ** | |||||||
| hg19:Y:21990482-C-A hg38:Y:19828596-C-A | ** | |||||||
| hg19:Y:15683818-CA-C hg38:Y:13571938-CA-C | ** | |||||||
| hg19:Y:14294342-G-A hg38:Y:12173636-G-A | 13×A | ** | ||||||
| hg19:Y:9386159-C-A hg38:Y:9548550-C-A | ** | |||||||
| hg19:Y:21361845-C-A hg38:Y:19199959-C-A | ** | |||||||
| hg19:Y:23831405-C-A hg38:Y:21669519-C-A | ** | |||||||
| hg19:Y:15484269-C-A hg38:Y:13372389-C-A | ** | |||||||
| hg19:Y:28784418-A-C hg38:Y:26638271-A-C | ** | |||||||
| hg19:Y:18670187-T-C hg38:Y:16558307-T-C | ** | |||||||
| hg19:Y:18670200-T-G hg38:Y:16558320-T-G | ** | |||||||
| hg19:Y:6384640-C-A hg38:Y:6516599-C-A | ** | |||||||
| hg38:Y:10935571-C-A | ** | |||||||
| hg19:Y:20241133-T-G hg38:Y:18079247-T-G | P5_Dst | ** | ||||||
| hg19:Y:24874403-C-A hg38:Y:22728256-C-A | g1 | ** | ||||||
| hg19:Y:16736875-C-A hg38:Y:14624995-C-A | ** | |||||||
| hg38:Y:10807074-A-ACTCCC | ** | |||||||
| hg38:Y:10807091-T-G | ** | |||||||
| hg19:Y:13253903-C-A hg38:Y:11098227-C-A | ** | |||||||
| hg19:Y:22028828-C-A hg38:Y:19866942-C-A | ** | |||||||
| hg19:Y:7009224-C-A hg38:Y:7141183-C-A | ** | |||||||
| hg19:Y:16217389-AT-A hg38:Y:14105509-AT-A | 10×T | ** | ||||||
| hg19:Y:21408219-C-A hg38:Y:19246333-C-A | ** | |||||||
| hg19:Y:23831422-C-T hg38:Y:21669536-C-T | ** | |||||||
| hg19:Y:10022957-C-A hg38:Y:10185348-C-A | ** | |||||||
| hg38:Y:56829426-A-T | ** | |||||||
| hg19:Y:13489767-C-T hg38:Y:11334091-C-T | ** | |||||||
| hg19:Y:2701929-C-A hg38:Y:2833888-C-A | ** | |||||||
| hg19:Y:2702139-C-A hg38:Y:2834098-C-A | ** | |||||||
| hg19:Y:2717174-C-A hg38:Y:2849133-C-A | ** | |||||||
| hg19:Y:2740521-C-A hg38:Y:2872480-C-A | ** | |||||||
| hg19:Y:2818022-A-T hg38:Y:2949981-A-T | ** | |||||||
| hg19:Y:2912652-G-T hg38:Y:3044611-G-T | ** | |||||||
| hg19:Y:3048197-T-A hg38:Y:3180156-T-A | ** | |||||||
| hg19:Y:3990525-G-A hg38:Y:4122484-G-A | ** | |||||||
| hg19:Y:4567642-G-A hg38:Y:4699601-G-A | ** | |||||||
| hg19:Y:4568359-G-A hg38:Y:4700318-G-A | FT221128 | ** | ||||||
| hg19:Y:4687780-TA-T hg38:Y:4819739-TA-T | ** | |||||||
| hg19:Y:4929512-C-T hg38:Y:5061471-C-T | ** | |||||||
| hg19:Y:5459323-C-A hg38:Y:5591282-C-A | ** | |||||||
| hg19:Y:5861132-ACAATT-A hg38:Y:5993091-ACAATT-A | ** | |||||||
| hg19:Y:6148750-A-C hg38:Y:6280709-A-C | IR3_Dst | ** | ||||||
| hg19:Y:6281915-A-T hg38:Y:6413874-A-T | IR3_Dst | ** | ||||||
| hg19:Y:6576863-C-A hg38:Y:6708822-C-A | ** | |||||||
| hg19:Y:6825356-G-T hg38:Y:6957315-G-T | ** | |||||||
| hg19:Y:6848036-C-A hg38:Y:6979995-C-A | ** | |||||||
| hg19:Y:6891886-A-C hg38:Y:7023845-A-C | ** | |||||||
| hg19:Y:7209819-G-A hg38:Y:7341778-G-A | ** | |||||||
| hg19:Y:7288170-T-G hg38:Y:7420129-T-G | ** | |||||||
| hg19:Y:7590402-G-T hg38:Y:7722361-G-T | ** | |||||||
| hg19:Y:7663026-A-G hg38:Y:7794985-A-G | ** | |||||||
| hg19:Y:7825523-C-A hg38:Y:7957482-C-A | ** | |||||||
| hg19:Y:8073252-A-G hg38:Y:8205211-A-G | ** | |||||||
| hg19:Y:8720142-G-A hg38:Y:8852101-G-A | ** | |||||||
| hg19:Y:8751640-T-A hg38:Y:8883599-T-A | ** | |||||||
| hg19:Y:8852241-C-A hg38:Y:8984200-C-A | ** | |||||||
| hg38:Y:9057020-T-C | ** | |||||||
| hg19:Y:9094310-G-A hg38:Y:9256701-G-A | ** | |||||||
| hg19:Y:9434955-T-C hg38:Y:9597346-T-C | ** | |||||||
| hg19:Y:9511330-G-A hg38:Y:9673721-G-A | ** | |||||||
| hg19:Y:9591034-G-A hg38:Y:9753425-G-A | IR3_Prx | 12×A | ** | |||||
| hg19:Y:9764278-C-A hg38:Y:9926669-C-A | ** | |||||||
| hg38:Y:10776682-C-A | ** | |||||||
| hg38:Y:10801689-T-TCTGAC | ** | |||||||
| hg38:Y:10850784-C-A | ** | |||||||
| hg38:Y:10934763-T-CA | ** | |||||||
| hg38:Y:10934810-G-C | ** | |||||||
| hg38:Y:10935522-C-A | ** | |||||||
| hg38:Y:10935585-T-TACACA | ** | |||||||
| hg38:Y:10935622-C-T | ** | |||||||
| hg38:Y:11014463-A-AC | ** | |||||||
| hg38:Y:11014465-TC-T | ** | |||||||
| hg38:Y:11031046-T-G | ** | |||||||
| hg19:Y:13234095-A-C hg38:Y:11078419-A-C | ** | |||||||
| hg19:Y:13280192-A-G hg38:Y:11124516-A-G | ** | |||||||
| hg19:Y:13296129-C-A hg38:Y:11140453-C-A | ** | |||||||
| hg19:Y:13315720-C-T hg38:Y:11160044-C-T | ** | |||||||
| hg19:Y:13457786-GATTCC-G hg38:Y:11302110-GATTCC-G | 4×ATTCC | ** | ||||||
| hg19:Y:13475156-C-A hg38:Y:11319480-C-A | ** | |||||||
| hg19:Y:13662223-C-G hg38:Y:11506547-C-G | DYZ17 | ** | ||||||
| hg19:Y:13813590-T-C hg38:Y:11692884-T-C | DYZ17 | ** | ||||||
| hg19:Y:13845540-C-T hg38:Y:11724834-C-T | DYZ17 | ** | ||||||
| hg19:Y:13903050-C-A hg38:Y:11782344-C-A | ** | |||||||
| hg19:Y:13958754-T-C hg38:Y:11838048-T-C | ** | |||||||
| hg19:Y:14025426-C-A hg38:Y:11904720-C-A | ** | |||||||
| hg19:Y:14032666-T-C hg38:Y:11911960-T-C | ** | |||||||
| hg19:Y:14067308-C-A hg38:Y:11946602-C-A | ** | |||||||
| hg19:Y:14070340-C-A hg38:Y:11949634-C-A | ** | |||||||
| hg19:Y:14253161-A-G hg38:Y:12132455-A-G | ** | |||||||
| hg19:Y:14253176-A-T hg38:Y:12132470-A-T | ** | |||||||
| hg19:Y:14308369-A-C hg38:Y:12187663-A-C | ** | |||||||
| hg19:Y:14351472-A-G hg38:Y:12230767-A-G | ** | |||||||
| hg19:Y:14375959-C-A hg38:Y:12255255-C-A | ** | |||||||
| hg19:Y:14421987-A-C hg38:Y:12301262-A-C | ** | |||||||
| hg19:Y:14558018-A-T hg38:Y:12446219-A-T | ** | |||||||
| hg19:Y:14568448-C-A hg38:Y:12456648-C-A | ** | |||||||
| hg19:Y:14746446-C-A hg38:Y:12634515-C-A | ** | |||||||
| hg19:Y:14788631-C-A hg38:Y:12676702-C-A | ** | |||||||
| hg19:Y:15133200-C-A hg38:Y:13021287-C-A | ** | |||||||
| hg19:Y:15151496-C-A hg38:Y:13039583-C-A | ** | |||||||
| hg19:Y:15258282-C-A hg38:Y:13146366-C-A | ** | |||||||
| hg19:Y:15342343-G-A hg38:Y:13230462-G-A | ** | |||||||
| hg19:Y:15595095-C-A hg38:Y:13483215-C-A | ** | |||||||
| hg19:Y:15656673-G-A hg38:Y:13544793-G-A | ** | |||||||
| hg19:Y:15677807-T-G hg38:Y:13565927-T-G | ** | |||||||
| hg19:Y:15798284-C-A hg38:Y:13686404-C-A | ** | |||||||
| hg19:Y:15911690-C-A hg38:Y:13799810-C-A | ** | |||||||
| hg19:Y:15980054-A-T hg38:Y:13868174-A-T | ** | |||||||
| hg19:Y:16003004-C-A hg38:Y:13891124-C-A | ** | |||||||
| hg19:Y:16057362-C-A hg38:Y:13945482-C-A | ** | |||||||
| hg19:Y:16086033-C-A hg38:Y:13974153-C-A | ** | |||||||
| hg19:Y:16484108-TC-A hg38:Y:14372228-TC-A | ** | |||||||
| hg19:Y:16703299-G-T hg38:Y:14591419-G-T | ** | |||||||
| hg19:Y:16711340-C-A hg38:Y:14599460-C-A | ** | |||||||
| hg19:Y:17032326-G-C hg38:Y:14920446-G-C | ** | |||||||
| hg19:Y:17092649-C-A hg38:Y:14980769-C-A | ** | |||||||
| hg19:Y:17191356-G-A hg38:Y:15079476-G-A | ** | |||||||
| hg19:Y:17283073-A-T hg38:Y:15171193-A-T | ** | |||||||
| hg19:Y:17310993-A-G hg38:Y:15199113-A-G | ** | |||||||
| hg19:Y:17426244-G-T hg38:Y:15314364-G-T | ** | |||||||
| hg19:Y:17572270-C-A hg38:Y:15460390-C-A | ** | |||||||
| hg19:Y:17637084-G-A hg38:Y:15525204-G-A | ** | |||||||
| hg19:Y:17654148-CT-C hg38:Y:15542268-CT-C | ** | |||||||
| hg19:Y:17669646-C-A hg38:Y:15557766-C-A | ** | |||||||
| hg19:Y:17673336-C-A hg38:Y:15561456-C-A | ** | |||||||
| hg19:Y:17760453-A-G hg38:Y:15648573-A-G | ** | |||||||
| hg19:Y:17822135-C-A hg38:Y:15710255-C-A | ** | |||||||
| hg19:Y:17860227-C-A hg38:Y:15748347-C-A | ** | |||||||
| hg19:Y:17864362-G-A hg38:Y:15752482-G-A | ** | |||||||
| hg19:Y:17923706-AGAAAAG-A hg38:Y:15811826-AGAAAAG-A | ** | |||||||
| hg19:Y:18053401-G-A hg38:Y:15941521-G-A | ** | |||||||
| hg19:Y:18088890-G-A hg38:Y:15977010-G-A | ** | |||||||
| hg19:Y:18241740-T-C hg38:Y:16129860-T-C | ** | |||||||
| hg19:Y:18263549-A-G hg38:Y:16151669-A-G | ** | |||||||
| hg19:Y:18387210-T-C hg38:Y:16275330-T-C | P6_Gap | ** | ||||||
| hg19:Y:18663353-G-A hg38:Y:16551473-G-A | ** | |||||||
| hg19:Y:18694740-C-A hg38:Y:16582860-C-A | ** | |||||||
| hg19:Y:18873067-T-A hg38:Y:16761187-T-A | ** | |||||||
| hg19:Y:18898718-C-A hg38:Y:16786838-C-A | ** | |||||||
| hg19:Y:18980976-C-A hg38:Y:16869096-C-A | ** | |||||||
| hg19:Y:18989788-C-A hg38:Y:16877908-C-A | ** | |||||||
| hg19:Y:19260469-T-C hg38:Y:17148589-T-C | ** | |||||||
| hg19:Y:19389637-G-A hg38:Y:17277757-G-A | FGC7335 | ** | ||||||
| hg19:Y:19431624-C-A hg38:Y:17319744-C-A | ** | |||||||
| hg19:Y:19451833-A-T hg38:Y:17339953-A-T | ** | |||||||
| hg19:Y:19509294-C-A hg38:Y:17397414-C-A | ** | |||||||
| hg19:Y:19527976-C-A hg38:Y:17416096-C-A | ** | |||||||
| hg19:Y:19829503-C-A hg38:Y:17717623-C-A | P5_Prx | ** | ||||||
| hg19:Y:19910923-A-G hg38:Y:17799043-A-G | P5_Prx | ** | ||||||
| hg19:Y:20295855-G-T hg38:Y:18133969-G-T | P5_Dst | ** | ||||||
| hg19:Y:20295859-G-T hg38:Y:18133973-G-T | P5_Dst | ** | ||||||
| hg19:Y:20447469-T-G hg38:Y:18285583-T-G | P5_Dst | ** | ||||||
| hg19:Y:20809934-C-A hg38:Y:18648048-C-A | P4_Gap | ** | ||||||
| hg19:Y:20989112-C-CTAAG hg38:Y:18827226-C-CTAAG | P4_Dst | ** | ||||||
| hg19:Y:21084351-A-T hg38:Y:18922465-A-T | ** | |||||||
| hg19:Y:21189403-A-G hg38:Y:19027517-A-G | ** | |||||||
| hg19:Y:21317076-A-G hg38:Y:19155190-A-G | ** | |||||||
| hg19:Y:21382386-C-A hg38:Y:19220500-C-A | ** | |||||||
| hg19:Y:21400002-G-A hg38:Y:19238116-G-A | ** | |||||||
| hg19:Y:21462463-C-A hg38:Y:19300577-C-A | ** | |||||||
| hg19:Y:21532339-C-A hg38:Y:19370453-C-A | ** | |||||||
| hg19:Y:21799442-C-A hg38:Y:19637556-C-A | ** | |||||||
| hg19:Y:22020635-C-A hg38:Y:19858749-C-A | ** | |||||||
| hg19:Y:22122237-G-T hg38:Y:19960351-G-T | ** | |||||||
| hg19:Y:22204055-C-A hg38:Y:20042169-C-A | ** | |||||||
| hg19:Y:22617028-C-A hg38:Y:20455142-C-A | ** | |||||||
| hg19:Y:22634079-C-A hg38:Y:20472193-C-A | ** | |||||||
| hg19:Y:23044153-C-A hg38:Y:20882267-C-A | ** | |||||||
| hg19:Y:23121353-GT-G hg38:Y:20959467-GT-G | ** | |||||||
| hg19:Y:23350527-C-A hg38:Y:21188641-C-A | ** | |||||||
| hg19:Y:23419067-A-C hg38:Y:21257181-A-C | ** | |||||||
| hg19:Y:23420536-G-A hg38:Y:21258650-G-A | ** | |||||||
| hg19:Y:23537327-C-A hg38:Y:21375441-C-A | ** | |||||||
| hg19:Y:23623398-A-T hg38:Y:21461512-A-T | ** | |||||||
| hg19:Y:23623402-T-C hg38:Y:21461516-T-C | ** | |||||||
| hg19:Y:23745064-C-A hg38:Y:21583178-C-A | ** | |||||||
| hg19:Y:23792466-G-A hg38:Y:21630580-G-A | ** | |||||||
| hg19:Y:23831363-G-A hg38:Y:21669477-G-A | ** | |||||||
| hg19:Y:23831434-A-AC hg38:Y:21669548-A-AC | ** | |||||||
| hg19:Y:23831442-T-C hg38:Y:21669556-T-C | ** | |||||||
| hg19:Y:23831453-G-C hg38:Y:21669567-G-C | ** | |||||||
| hg19:Y:23831458-G-T hg38:Y:21669572-G-T | ** | |||||||
| hg19:Y:24666271-A-G hg38:Y:22520124-A-G | P3_b2 | ** | ||||||
| hg19:Y:24870808-A-C hg38:Y:22724661-A-C | IR1_R | ** | ||||||
| hg19:Y:25651673-C-T hg38:Y:23505526-C-T | P1_b3 | ** | ||||||
| hg19:Y:28095950-T-G hg38:Y:25949803-T-G | P1_Y2 | ** | ||||||
| hg19:Y:28492191-C-CAA hg38:Y:26346044-C-CAA | 10×A | ** | ||||||
| hg19:Y:28581763-C-A hg38:Y:26435616-C-A | ** | |||||||
| hg19:Y:28601002-GT-G hg38:Y:26454855-GT-G | ** | |||||||
| hg19:Y:28760940-G-T hg38:Y:26614793-G-T | ** | |||||||
| hg38:Y:56832350-C-A | ** | |||||||
| hg38:Y:56834563-C-T | ** | |||||||
| hg19:Y:6174002-T-G hg38:Y:6305961-T-G | IR3_Dst | ** | ||||||
| hg19:Y:13453238-C-A hg38:Y:11297562-C-A | ** | |||||||
| hg19:Y:13484105-A-C hg38:Y:11328429-A-C | ** | |||||||
| hg19:Y:17196643-A-C hg38:Y:15084763-A-C | ** | |||||||
| hg19:Y:22591371-T-C hg38:Y:20429485-T-C | ** | |||||||
| hg19:Y:22950138-G-T hg38:Y:20788252-G-T | ** | |||||||
| hg19:Y:28370130-A-G hg38:Y:26223983-A-G | P1_gr2 | ** | ||||||
| hg38:Y:56849042-A-G | ** | |||||||
| hg19:Y:16051006-CTTTCTT-C hg38:Y:13939126-CTTTCTT-C | *** | |||||||
| hg19:Y:59027271-C-T hg38:Y:56881124-C-T | *** | |||||||
| hg19:Y:14088662-C-A hg38:Y:11967956-C-A | *** | |||||||
| hg19:Y:22783192-C-A hg38:Y:20621306-C-A | *** | |||||||
| hg19:Y:19449428-GAAAAAA-G hg38:Y:17337548-GAAAAAA-G | 23×A | *** | ||||||
| hg38:Y:56881154-A-AAAAAGC | 4×AAAAC | *** | ||||||
| hg19:Y:9880556-C-A hg38:Y:10042947-C-A | *** | |||||||
| hg19:Y:23311571-A-ATT hg38:Y:21149685-A-ATT | 15×T | *** | ||||||
| hg19:Y:7277809-C-A hg38:Y:7409768-C-A | *** | |||||||
| hg19:Y:16909178-C-CTT hg38:Y:14797298-C-CTT | 16×T | *** | ||||||
| hg19:Y:13253396-G-GTT,GTTT hg38:Y:11097720-G-GTT,GTTT | 12×T | *** | ||||||
| hg19:Y:24366716-T-TA hg38:Y:22220569-T-TA | 9×A | *** | ||||||
| hg19:Y:13869198-T-G hg38:Y:11748492-T-G | DYZ17 | *** | ||||||
| hg19:Y:16940889-C-A hg38:Y:14829009-C-A | *** | |||||||
| hg38:Y:56881223-A-C | *** | |||||||
| hg19:Y:13808750-G-T hg38:Y:11688044-G-T | DYZ17 | *** | ||||||
| hg19:Y:21238996-C-A hg38:Y:19077110-C-A | *** | |||||||
| hg19:Y:4049372-TAAA-T hg38:Y:4181331-TAAA-T | 16×A | *** | ||||||
| hg19:Y:9649472-C-A hg38:Y:9811863-C-A | IR3_Prx | *** | ||||||
| hg19:Y:18942922-C-A hg38:Y:16831042-C-A | *** | |||||||
| hg19:Y:22525954-A-AT hg38:Y:20364068-A-AT | Y87179 | 9×T | *** | |||||
| hg19:Y:15579637-C-A hg38:Y:13467757-C-A | *** | |||||||
| hg19:Y:3671925-A-G hg38:Y:3803884-A-G | *** | |||||||
| hg19:Y:16627458-C-A hg38:Y:14515578-C-A | *** | |||||||
| hg19:Y:2803364-C-A hg38:Y:2935323-C-A | *** | |||||||
| hg19:Y:13478422-C-T hg38:Y:11322746-C-T | FGC77978 | *** | ||||||
| hg19:Y:19408455-G-GT hg38:Y:17296575-G-GT | 9×T | *** | ||||||
| hg38:Y:12865784-CTTT-C,CT | 15×T | *** | ||||||
| hg38:Y:56829463-T-G | *** | |||||||
| hg19:Y:2804009-GA-G hg38:Y:2935968-GA-G | *** | |||||||
| hg19:Y:5274551-G-GA hg38:Y:5406510-G-GA | 9×A | *** | ||||||
| hg19:Y:6806660-C-A hg38:Y:6938619-C-A | *** | |||||||
| hg19:Y:6952417-C-A hg38:Y:7084376-C-A | *** | |||||||
| hg19:Y:7854389-C-A hg38:Y:7986348-C-A | *** | |||||||
| hg19:Y:9666654-G-T hg38:Y:9829045-G-T | IR3_Prx | *** | ||||||
| hg19:Y:9968339-GTT-G,GTTTT hg38:Y:10130730-GTT-G,GTTTT | 15×T | *** | ||||||
| hg19:Y:10015808-G-A hg38:Y:10178199-G-A | *** | |||||||
| hg19:Y:13585425-C-A hg38:Y:11429749-C-A | *** | |||||||
| hg19:Y:14342587-C-A hg38:Y:12221882-C-A | *** | |||||||
| hg19:Y:14357450-C-A hg38:Y:12236745-C-A | *** | |||||||
| hg19:Y:14702300-C-A hg38:Y:12590366-C-A | *** | |||||||
| hg19:Y:14731258-A-G hg38:Y:12619326-A-G | *** | |||||||
| hg19:Y:14807559-C-A hg38:Y:12695630-C-A | *** | |||||||
| hg19:Y:14836800-C-A hg38:Y:12724867-C-A | *** | |||||||
| hg19:Y:14846626-C-A hg38:Y:12734692-C-A | *** | |||||||
| hg19:Y:14981520-C-A hg38:Y:12869596-C-A | *** | |||||||
| hg19:Y:15592686-C-A hg38:Y:13480806-C-A | *** | |||||||
| hg19:Y:15899239-C-A hg38:Y:13787359-C-A | *** | |||||||
| hg19:Y:15945679-C-A hg38:Y:13833799-C-A | *** | |||||||
| hg19:Y:16076219-C-CA hg38:Y:13964339-C-CA | 8×A | *** | ||||||
| hg19:Y:16240068-T-C hg38:Y:14128188-T-C | *** | |||||||
| hg19:Y:16283441-T-C hg38:Y:14171561-T-C | *** | |||||||
| hg19:Y:16710763-GTA-G,GTATA hg38:Y:14598883-GTA-G,GTATA | 14×TA | *** | ||||||
| hg19:Y:17318651-C-A hg38:Y:15206771-C-A | *** | |||||||
| hg19:Y:17969221-C-A hg38:Y:15857341-C-A | *** | |||||||
| hg19:Y:18195394-C-A hg38:Y:16083514-C-A | *** | |||||||
| hg19:Y:18195399-C-A hg38:Y:16083519-C-A | *** | |||||||
| hg19:Y:18713681-C-A hg38:Y:16601801-C-A | *** | |||||||
| hg19:Y:19066460-CT-C hg38:Y:16954580-CT-C | *** | |||||||
| hg19:Y:19200081-C-A hg38:Y:17088201-C-A | *** | |||||||
| hg19:Y:19256503-C-A hg38:Y:17144623-C-A | *** | |||||||
| hg19:Y:19565351-C-A hg38:Y:17453471-C-A | *** | |||||||
| hg19:Y:20959285-G-GT hg38:Y:18797399-G-GT | P4_Dst | *** | ||||||
| hg19:Y:21360185-C-A hg38:Y:19198299-C-A | *** | |||||||
| hg19:Y:21639801-T-C hg38:Y:19477915-T-C | *** | |||||||
| hg19:Y:21858590-C-A hg38:Y:19696704-C-A | *** | |||||||
| hg19:Y:21883658-C-A hg38:Y:19721772-C-A | *** | |||||||
| hg19:Y:22082915-C-A hg38:Y:19921029-C-A | *** | |||||||
| hg19:Y:22104037-T-C hg38:Y:19942151-T-C | *** | |||||||
| hg19:Y:22562230-C-A hg38:Y:20400344-C-A | *** | |||||||
| hg19:Y:22661493-ATGTGTGTGTGTG-A,ATGTGTGTGTG hg38:Y:20499607-ATGTGTGTGTGTG-A,ATGTGTGTGTG | 26×TG | *** | ||||||
| hg19:Y:22819287-C-A hg38:Y:20657401-C-A | *** | |||||||
| hg19:Y:22820731-C-A hg38:Y:20658845-C-A | *** | |||||||
| hg19:Y:23010489-G-A hg38:Y:20848603-G-A | *** | |||||||
| hg19:Y:23059214-C-A hg38:Y:20897328-C-A | *** | |||||||
| hg19:Y:23386703-C-A hg38:Y:21224817-C-A | *** | |||||||
| hg19:Y:23651240-C-A hg38:Y:21489354-C-A | *** | |||||||
| hg19:Y:23732232-CAAA-C,CAA hg38:Y:21570346-CAAA-C,CAA | 17×A | *** | ||||||
| hg19:Y:23992692-C-A hg38:Y:21846545-C-A | *** | |||||||
| hg19:Y:24381937-A-AG hg38:Y:22235790-A-AG | *** | |||||||
| hg19:Y:24435807-T-C hg38:Y:22289660-T-C | *** | |||||||
| hg19:Y:28761108-G-T hg38:Y:26614961-G-T | *** | |||||||
| hg19:Y:3481522-A-AC hg38:Y:3613481-A-AC | *** | |||||||
| hg19:Y:13470945-C-A hg38:Y:11315269-C-A | *** | |||||||
| hg19:Y:18740841-T-A hg38:Y:16628961-T-A | FTB31505 | *** | ||||||
| hg19:Y:18058759-G-T hg38:Y:15946879-G-T | *** | |||||||
| hg19:Y:21589258-C-G hg38:Y:19427372-C-G | *** | |||||||
| hg19:Y:22548098-A-C hg38:Y:20386212-A-C | *** | |||||||
| hg19:Y:23346042-A-T hg38:Y:21184156-A-T | *** | |||||||
| hg19:Y:26730209-G-GA hg38:Y:24584062-G-GA | P1_g2 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: MK11831 | 8571628 | 7085672 | 7076694 |
| Kit: MK11831 | 14969522 | 9365011 | 8318111 |
| Used in age calculations | 14969522 | 9365011 | 8318111 |
| Counts of SNPs | 2 | 1 |
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