Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > S5488 > Z16294 > BY11121 > Z16281 > A14023 > A3149

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
153101
13449882-C-A 11294206-C-A A*
2855287-G-T 2987246-G-T YYA*
25966126-T-C 23819979-T-C P1_Y1 A*
18883248-C-T 16771368-C-T YYA*
14429749-C-T 12309022-C-T YY+
28390801-G-A 26244654-G-A BY35804 P1_gr2 +
23429717-G-GA 21267831-G-GA 8×A+
14954773-TTTTG-T 12842848-TTTTG-T 5×TTTG+
9468168-GTT-G 9630559-GTT-G *
10847608-A-C **
10857236-A-C **
10753224-C-G **
10764653-G-A **
10777804-T-G **
10782442-T-A **
10789177-C-A **
10791575-C-A **
10857234-T-C **
10801122-G-T **
10833675-C-A **
10801927-A-C **
10811740-C-A **
10852285-A-C **
10753210-C-A **
10827765-C-A **
10851798-C-A **
10827820-C-A **
10828928-A-C **
10829685-T-C **
10832256-C-T **
10820250-A-G **
14031666-CT-C 11910960-CT-C 10×T**
10753195-CAT-C **
9973344-T-C 10135735-T-C **
9107851-T-C **
9108286-G-C **
9076674-G-T 9239065-G-T **
9398179-T-C 9560570-T-C **
9420360-T-A 9582751-T-A **
9424487-G-A 9586878-G-A **
9674073-T-G 9836464-T-G IR3_Prx **
9735647-G-T 9898038-G-T IR3_Prx **
9965048-G-A 10127439-G-A **
9965256-T-A 10127647-T-A **
10060891-T-A 10223282-T-A **
10857263-G-A **
10064720-A-G 10227111-A-G **
10648152-C-A **
10654068-C-T **
10667717-C-A **
10687097-C-A **
10691506-T-C **
10747675-G-T **
10751253-C-A **
10752636-C-A **
10753191-ATTC-A **
10857242-T-C **
10901482-C-T **
10868565-T-C **
11030916-G-T **
11011110-C-A **
11018444-C-T **
11020780-G-T **
11022237-A-T **
11022322-C-A **
11022336-C-A **
11022583-A-C **
11022678-T-G **
11022686-A-G **
11024605-T-C **
13214575-G-T 11058899-G-T **
11005260-C-G **
13296000-A-T 11140324-A-T **
13323216-A-G 11167540-A-G **
13385266-G-T 11229590-G-T **
13445046-C-A 11289370-C-A **
13485583-A-T 11329907-A-T **
13556838-A-T 11401162-A-T **
13579297-A-G 11423621-A-G **
13579304-G-T 11423628-G-T **
13579307-G-T 11423631-G-T **
13579312-C-CTT 11423636-C-CTT **
11006797-A-C **
11003395-T-C **
10879487-C-A **
10938274-C-A **
10879851-C-T **
10896229-C-A **
8824251-G-T 8956210-G-T **
10907343-C-A **
10907407-C-A **
10911765-C-T **
10923841-C-T **
10928076-T-C **
10929558-A-G **
10937241-T-C **
10947214-A-C **
10999512-T-C **
10950843-C-A **
10957869-A-C **
10970653-A-C **
10975485-C-A **
10985257-T-C **
10985584-C-A **
10989415-C-A **
10991855-C-A **
10994160-C-A **
10995599-A-C **
8827378-TATA-T 8959337-TATA-T **
8671351-A-G 8803310-A-G **
8785605-G-A 8917564-G-A **
5454578-A-G 5586537-A-G **
5171404-C-A 5303363-C-A **
5216349-C-A 5348308-C-A **
5219492-A-T 5351451-A-T **
5249243-C-A 5381202-C-A **
5305285-G-A 5437244-G-A **
5305305-G-T 5437264-G-T **
5406006-C-A 5537965-C-A **
5407229-C-A 5539188-C-A **
5440440-G-T 5572399-G-T **
5553269-G-A 5685228-G-A **
5100350-G-T 5232309-G-T **
5567855-C-A 5699814-C-A **
5576716-A-T 5708675-A-T **
5587375-T-G 5719334-T-G **
5603522-T-C 5735481-T-C **
5612799-C-A 5744758-C-A **
5668850-C-A 5800809-C-A **
5669824-C-A 5801783-C-A **
5691166-G-T 5823125-G-T **
5698542-G-T 5830501-G-T **
5769334-C-A 5901293-C-A **
5115837-T-A 5247796-T-A **
5084323-C-T 5216282-C-T **
5828906-C-G 5960865-C-G **
4222686-G-A 4354645-G-A **
3831092-T-A 3963051-T-A **
3937890-A-G 4069849-A-G **
3949734-C-A 4081693-C-A **
4092820-C-G 4224779-C-G **
4123325-T-A 4255284-T-A **
4141071-T-A 4273030-T-A **
4142113-G-T 4274072-G-T **
4142133-A-G 4274092-A-G **
4143362-A-T 4275321-A-T **
4222457-C-A 4354416-C-A **
4226272-G-T 4358231-G-T **
4998909-T-G 5130868-T-G **
4232551-G-T 4364510-G-T **
4282160-C-A 4414119-C-A **
4408829-G-A 4540788-G-A **
4452854-C-A 4584813-C-A **
4462067-G-T 4594026-G-T **
4509479-C-A 4641438-C-A **
4699877-G-A 4831836-G-A **
4713935-A-C 4845894-A-C **
4788968-C-A 4920927-C-A **
4802225-T-C 4934184-T-C **
5815363-G-T 5947322-G-T **
5854923-G-T 5986882-G-T **
8710038-C-T 8841997-C-T **
7331273-T-A 7463232-T-A **
7075075-C-A 7207034-C-A **
7090868-G-T 7222827-G-T **
7094544-C-A 7226503-C-A **
7111853-T-A 7243812-T-A **
7127731-G-T 7259690-G-T **
7150657-T-G 7282616-T-G **
7182130-C-A 7314089-C-A **
7186328-G-T 7318287-G-T **
7214399-C-A 7346358-C-A **
7252383-A-AG 7384342-A-AG **
7390735-G-T 7522694-G-T **
7042760-A-G 7174719-A-G **
7757204-A-G 7889163-A-G **
7784460-C-A 7916419-C-A **
7917048-G-T 8049007-G-T **
8016970-G-A 8148929-G-A **
8052511-C-T 8184470-C-T **
8058019-G-T 8189978-G-T **
8078891-A-C 8210850-A-C **
8333527-T-TCTTCTTCTC 8465486-T-TCTTCTTCTC **
11643643-G-T **
8674197-T-C 8806156-T-C **
7044901-C-A 7176860-C-A **
7042678-C-T 7174637-C-T **
5881602-C-A 6013561-C-A **
6356142-G-T 6488101-G-T **
5902464-C-A 6034423-C-A **
5902562-C-A 6034521-C-A **
5905343-G-C 6037302-G-C **
5918525-G-T 6050484-G-T **
5990531-G-A 6122490-G-A **
5990667-C-A 6122626-C-A **
6147402-C-G 6279361-C-G IR3_Dst **
6153218-G-A 6285177-G-A IR3_Dst **
6211515-G-T 6343474-G-T IR3_Dst **
6339129-A-ACG 6471088-A-ACG IR3_Dst **
6356155-A-T 6488114-A-T **
7031036-A-C 7162995-A-C **
6446579-G-T 6578538-G-T **
6446581-C-T 6578540-C-T **
6593234-C-A 6725193-C-A **
6727579-TC-T 6859538-TC-T **
6727605-G-T 6859564-G-T **
6727611-A-G 6859570-A-G **
6770334-A-C 6902293-A-C **
6780758-C-A 6912717-C-A **
6832325-T-C 6964284-T-C **
7000152-ATTGATTTGCATATG-A 7132111-ATTGATTTGCATATG-A **
13627833-A-G 11472157-A-G **
13872386-T-C 11751680-T-C **
11650026-G-T **
19551858-A-G 17439978-A-G **
19244810-G-A 17132930-G-A **
19246152-C-T 17134272-C-T **
19251527-A-G 17139647-A-G **
19253666-T-C 17141786-T-C **
19253667-C-T 17141787-C-T **
19253679-G-A 17141799-G-A **
19297520-G-T 17185640-G-T **
19310237-C-A 17198357-C-A **
19460626-C-G 17348746-C-G **
19720738-G-T 17608858-G-T P5_Prx **
19189623-T-G 17077743-T-G **
19948192-T-TCCC 17836312-T-TCCC P5_Prx **
19948193-T-TC 17836313-T-TC P5_Prx **
20685213-G-A 18523327-G-A P4_Prx **
20771917-G-T 18610031-G-T P4_Prx **
21002539-C-CCCTG 18840653-C-CCCTG P4_Dst **
21002550-T-TGC 18840664-T-TGC P4_Dst **
21118607-C-A 18956721-C-A **
21207045-C-A 19045159-C-A **
21268985-C-A 19107099-C-A **
21361942-C-T 19200056-C-T **
19189624-A-AT 17077744-A-AT **
19189612-TA-T 17077732-TA-T **
21388637-C-A 19226751-C-A **
18794084-A-C 16682204-A-C **
17963697-T-G 15851817-T-G **
18040456-C-A 15928576-C-A **
18050629-CT-C 15938749-CT-C **
18147540-GA-G 16035660-GA-G **
18152921-GT-G 16041041-GT-G 10×T**
18183725-C-A 16071845-C-A FT24143 **
18187932-G-A 16076052-G-A **
18187948-A-C 16076068-A-C **
18284755-G-T 16172875-G-T P6_Prx **
18749554-T-A 16637674-T-A **
18864299-G-A 16752419-G-A **
19189596-C-G 17077716-C-G **
18869605-C-A 16757725-C-A **
18965842-C-A 16853962-C-A **
18993322-C-A 16881442-C-A **
19041278-T-G 16929398-T-G **
19079115-C-A 16967235-C-A **
19085359-G-T 16973479-G-T **
19122050-G-T 17010170-G-T **
19189488-C-T 17077608-C-T **
19189510-C-A 17077630-C-A **
19189530-C-A 17077650-C-A **
21375699-C-A 19213813-C-A **
21388777-C-A 19226891-C-A **
17702635-T-C 15590755-T-C **
28654078-C-A 26507931-C-A **
24298897-A-ACG 22152750-A-ACG P3_t1 **
24585722-G-T 22439575-G-T P3_t2 **
24884119-C-A 22737972-C-A g1 **
27952101-ATAT-A 25805954-ATAT-A P1_Y2 **
28089304-T-C 25943157-T-C P1_Y2 **
28511021-T-C 26364874-T-C **
28532002-T-G 26385855-T-G **
28560747-C-A 26414600-C-A **
28609098-A-G 26462951-A-G **
28618383-G-A 26472236-G-A **
28718344-G-T 26572197-G-T **
23569909-C-A 21408023-C-A **
28727533-C-A 26581386-C-A **
28747561-C-A 26601414-C-A **
28755838-A-C 26609691-A-C **
28765504-G-A 26619357-G-A **
28776450-T-C 26630303-T-C **
56840770-C-A **
56846123-T-G **
56858420-G-A **
56860713-C-A **
56876132-A-ACAGAC **
23818948-C-A 21657062-C-A **
23204752-C-A 21042866-C-A **
21523417-C-A 19361531-C-A **
22168189-G-A 20006303-G-A **
21583716-G-A 19421830-G-A **
21600582-TC-T 19438696-TC-T **
21600594-G-T 19438708-G-T **
21697254-T-C 19535368-T-C **
21922080-C-T 19760194-C-T 23×A**
21984148-T-A 19822262-T-A **
22058558-C-A 19896672-C-A **
22088822-G-A 19926936-G-A **
22167323-G-A 20005437-G-A **
22167332-G-A 20005446-G-A **
22193859-A-C 20031973-A-C **
23202673-C-A 21040787-C-A **
22204960-G-T 20043074-G-T **
22245646-A-G 20083760-A-G DYZ19 **
22355147-C-G 20193261-C-G DYZ19 **
22355241-G-A 20193355-G-A DYZ19 **
22877841-G-T 20715955-G-T **
22995364-C-A 20833478-C-A **
23049374-C-A 20887488-C-A **
23091773-G-T 20929887-G-T **
23111590-G-T 20949704-G-T FGC27817 **
23127522-A-T 20965636-A-T **
17778258-G-T 15666378-G-T **
17502730-C-T 15390850-C-T **
11662313-A-C **
14742240-G-T 12630308-G-T **
14527029-C-A 12415230-C-A **
14533466-C-A 12421667-C-A **
14568178-C-A 12456378-C-A **
14592139-G-T 12480339-G-T **
14592146-G-C 12480346-G-C **
14670100-G-T 12558166-G-T **
14673304-G-T 12561370-G-T **
14677092-G-A 12565158-G-A **
14678014-C-A 12566080-C-A **
14717233-A-G 12605301-A-G **
14867115-A-G 12755185-A-G **
14479603-G-T 12358872-G-T **
14908319-A-C 12796386-A-C **
14910788-C-T 12798855-C-T **
15104822-C-A 12992910-C-A **
15104825-T-C 12992913-T-C **
15104833-A-G 12992921-A-G **
15104840-G-A 12992928-G-A **
15209207-C-A 13097293-C-A **
15231525-A-T 13119611-A-T **
15320591-G-A 13208697-G-A **
15369209-T-C 13257329-T-C **
14492587-G-T 12380784-G-T **
14479589-G-C 12358858-G-C **
15423027-T-A 13311147-T-A **
14020224-C-A 11899518-C-A **
11667638-G-T **
11672807-G-C **
3760802-C-A 3892761-C-A **
13882561-A-C 11761855-A-C **
13896914-T-C 11776208-T-C **
13938589-G-T 11817883-G-T **
13940578-G-T 11819872-G-T **
13993900-C-A 11873194-C-A **
14009532-A-G 11888826-A-G **
14016590-G-T 11895884-G-T **
14059296-C-T 11938590-C-T **
14420302-G-C 12299577-G-C **
14075961-T-C 11955255-T-C **
14136122-T-C 12015416-T-C **
14160328-G-T 12039622-G-T **
14255113-C-A 12134407-C-A **
14295306-G-A 12174600-G-A **
14298024-GC-G 12177318-GC-G **
14302005-G-T 12181299-G-T **
14308101-G-T 12187395-G-T **
14324390-A-G 12203684-A-G **
14418126-T-TTA 12297423-T-TTA **
15392604-A-T 13280724-A-T **
15423076-T-A 13311196-T-A **
17501026-C-T 15389146-C-T **
16967425-C-A 14855545-C-A **
16493264-T-A 14381384-T-A **
16583414-T-A 14471534-T-A **
16583421-C-A 14471541-C-A **
16617549-G-T 14505669-G-T **
16617606-G-T 14505726-G-T **
16617941-G-A 14506061-G-A **
16624760-C-A 14512880-C-A **
16625530-A-T 14513650-A-T **
16704579-C-A 14592699-C-A **
16719645-G-A 14607765-G-A **
16981333-C-A 14869453-C-A **
16464630-C-A 14352750-C-A **
16987033-G-A 14875153-G-A **
16987061-A-G 14875181-A-G **
17000062-C-A 14888182-C-A **
17103456-C-A 14991576-C-A **
17124810-C-T 15012930-C-T **
17136898-T-C 15025018-T-C **
17175460-T-A 15063580-T-A **
17367854-C-A 15255974-C-A **
17372793-G-T 15260913-G-T **
17385388-T-A 15273508-T-A **
16467830-G-A 14355950-G-A **
16445855-C-A 14333975-C-A **
15536408-C-A 13424528-C-A **
15995485-C-A 13883605-C-A **
15732985-C-G 13621105-C-G **
15735358-C-A 13623478-C-A **
15735599-C-A 13623719-C-A **
15759796-G-T 13647916-G-T **
15788877-C-A 13676997-C-A **
15805227-A-G 13693347-A-G **
15941486-T-C 13829606-T-C **
15957720-G-T 13845840-G-T **
15957794-A-T 13845914-A-T **
15963726-A-T 13851846-A-T **
16005327-G-A 13893447-G-A **
16405292-C-T 14293412-C-T **
16012847-A-T 13900967-A-T **
16020860-T-C 13908980-T-C **
16021500-G-T 13909620-G-T **
16056920-G-A 13945040-G-A **
16120013-T-TTTCC 14008133-T-TTTCC P8_Prx **
16214227-A-T 14102347-A-T **
16321631-G-A 14209751-G-A **
16321634-T-A 14209754-T-A **
16352258-C-T 14240378-C-T **
16364107-T-G 14252227-T-G **
3777070-A-G 3909029-A-G **
4175032-A-T 4306991-A-T **
3727597-G-T 3859556-G-T **
10980222-C-A **
13881233-C-A 11760527-C-A **
28742050-C-A 26595903-C-A **
17676363-C-A 15564483-C-A **
13197042-C-A 11041366-C-A **
15685161-C-A 13573281-C-A **
11029412-A-C **
5191319-A-T 5323278-A-T **
22993472-C-A 20831586-C-A **
18925616-C-A 16813736-C-A **
22864943-C-A 20703057-C-A **
15882073-TCAAAA-T 13770193-TCAAAA-T **
21802820-C-A 19640934-C-A **
23476031-TG-T 21314145-TG-T **
11014677-T-C **
4470510-C-A 4602469-C-A **
7331227-C-A 7463186-C-A **
7152943-C-A 7284902-C-A **
11029360-T-C **
6976332-T-G 7108291-T-G **
18810869-C-A 16698989-C-A **
28532183-C-A 26386036-C-A **
19187415-C-T 17075535-C-T **
6790159-C-A 6922118-C-A **
22171478-G-T 20009592-G-T FGC65244 **
15971222-G-C 13859342-G-C **
15635907-C-T 13524027-C-T **
21464535-TCA-T 19302649-TCA-T **
4244800-AT-A 4376759-AT-A 10×T**
4175042-A-T 4307001-A-T **
16279421-C-A 14167541-C-A **
28089262-T-TC 25943115-T-TC P1_Y2 **
17481226-C-A 15369346-C-A **
22171558-GA-G 20009672-GA-G **
5645082-C-A 5777041-C-A **
10959378-T-C **
9965118-C-A 10127509-C-A **
10979240-G-T **
21175745-G-T 19013859-G-T **
10959391-A-T **
15641689-C-A 13529809-C-A **
8738968-C-A 8870927-C-A **
9979197-C-A 10141588-C-A **
5981436-G-A 6113395-G-A **
15320588-G-A 13208694-G-A Y93508 **
7107606-T-C 7239565-T-C **
19604807-T-A 17492927-T-A P5_Prx **
7109346-C-A 7241305-C-A **
8079447-C-A 8211406-C-A **
9843184-C-CAA 10005575-C-CAA 15×A**
28469442-C-A 26323295-C-A **
14566696-C-A 12454896-C-A **
13227939-C-A 11072263-C-A **
13324768-C-A 11169092-C-A **
14356472-C-A 12235767-C-A **
3679662-A-AC 3811621-A-AC **
13846748-T-A 11726042-T-A **
19075278-C-A 16963398-C-A **
11029390-T-CGAATC **
15655457-C-A 13543577-C-A **
10821752-C-A **
4064047-C-A 4196006-C-A **
17343681-C-A 15231801-C-A **
23723631-C-T 21561745-C-T **
17367631-C-A 15255751-C-A **
16701820-G-T 14589940-G-T **
15995562-C-A 13883682-C-A **
15728769-C-A 13616889-C-A **
14867119-A-T 12755189-A-T **
15863117-C-A 13751237-C-A **
3696712-G-T 3828671-G-T **
15115574-C-A 13003661-C-A **
10983158-A-C **
7322843-C-A 7454802-C-A **
10818700-C-T **
3250714-G-T 3382673-G-T **
10777027-G-T **
19293749-C-G 17181869-C-G **
18422844-C-A 16310964-C-A P6_Gap **
16823890-C-A 14712010-C-A **
3648564-C-A 3780523-C-A **
13462302-G-C 11306626-G-C **
13462326-C-A 11306650-C-A **
20785-G-C FGC77958 **
17548623-C-A 15436743-C-A **
21464529-T-A 19302643-T-A **
10672113-C-A **
28596796-C-A 26450649-C-A **
15882071-T-A 13770191-T-A **
14041507-C-A 11920801-C-A **
14953575-C-A 12841649-C-A **
9107974-G-T **
9930125-G-T 10092516-G-T **
17654930-C-A 15543050-C-A **
10991303-G-T **
22277829-C-G 20115943-C-G DYZ19 **
17569224-C-A 15457344-C-A **
21115687-C-A 18953801-C-A **
13846728-T-A 11726022-T-A **
18147539-A-G 16035659-A-G **
14704365-C-A 12592431-C-A **
23831287-G-T 21669401-G-T **
26275944-A-T 24129797-A-T P1_Y1 **
10834047-T-C **
10834052-C-G **
10834056-A-C **
10834057-A-T **
10834063-T-TC **
13223658-A-G 11067982-A-G **
3340599-C-A 3472558-C-A **
3389195-C-A 3521154-C-A **
19931646-A-T 17819766-A-T P5_Prx **
13878557-T-A 11757851-T-A **
6648128-G-C 6780087-G-C **
8550841-C-A 8682800-C-A **
4416895-A-G 4548854-A-G **
18959287-G-A 16847407-G-A **
13462281-C-A 11306605-C-A **
22777099-C-A 20615213-C-A **
10994316-C-A **
22077290-C-A 19915404-C-A **
18154532-C-A 16042652-C-A **
24472454-A-G 22326307-A-G **
28556294-T-G 26410147-T-G **
27546775-G-T 25400628-G-T P1_Y2 **
15882054-G-A 13770174-G-A **
13216567-C-A 11060891-C-A **
28596727-T-G 26450580-T-G **
7012613-C-A 7144572-C-A **
5981398-C-T 6113357-C-T **
6727577-A-T 6859536-A-T **
17279317-C-A 15167437-C-A **
28800722-A-G 26654575-A-G Z9881 **
58988977-C-A 56842830-C-A **
17946965-G-C 15835085-G-C **
28556305-A-G 26410158-A-G **
7167145-C-A 7299104-C-A **
13485574-A-G 11329898-A-G **
2730092-A-ATT 2862051-A-ATT 17×T**
58819734-A-G 56771137-T-C **
24458742-C-A 22312595-C-A **
19183871-C-A 17071991-C-A **
14562364-G-A 12450564-G-A **
8661765-C-A 8793724-C-A **
17310916-G-T 15199036-G-T **
19677906-C-CT 17566026-C-CT P5_Prx **
22277837-T-C 20115951-T-C DYZ19 **
10794026-C-A **
56842829-T-C **
21118736-C-A 18956850-C-A **
10794025-C-A **
18959294-G-T 16847414-G-T **
17310929-A-T 15199049-A-T **
19189489-T-C 17077609-T-C **
28800715-T-G 26654568-T-G **
10994391-G-A **
17616876-C-A 15504996-C-A **
17085721-CTTTT-C 14973841-CTTTT-C 20×T**
19938632-A-T 17826752-A-T P5_Prx **
10794023-C-A FT32889 **
17310925-G-T 15199045-G-T **
14446591-C-A 12325864-C-A **
10938044-C-A **
24472457-C-T 22326310-C-T **
8661756-C-A 8793715-C-A Y87651 **
14467638-C-A 12346907-C-A **
6226075-C-T 6358034-C-T IR3_Dst **
5842596-C-A 5974555-C-A **
15986666-C-A 13874786-C-A **
18895721-C-A 16783841-C-A **
7225700-C-A 7357659-C-A **
8289188-C-A 8421147-C-A **
10781676-AATTCCATTCC-A **
3625905-C-A 3757864-C-A **
56842837-C-A **
11004495-A-T **
56842853-C-T **
56842879-C-G **
10964778-A-ACCCCT **
13462317-T-A 11306641-T-A **
16053511-C-A 13941631-C-A **
10943702-A-C **
10943708-C-T **
10943712-G-A **
11004484-C-G **
11004487-C-G **
11034098-C-T **
23961295-GAA-G 21815148-GAA-G 12×A**
11004486-C-T **
7235865-A-T 7367824-A-T **
17038422-C-A 14926542-C-A **
10924626-G-T **
16478195-C-A 14366315-C-A **
13846737-C-A 11726031-C-A **
11031432-A-T **
13878565-T-A 11757859-T-A **
28556312-A-G 26410165-A-G **
21839987-C-T 19678101-C-T **
6816741-G-C 6948700-G-C **
13846744-G-A 11726038-G-A **
22713061-C-A 20551175-C-A **
13888600-G-T 11767894-G-T **
16462502-C-A 14350622-C-A **
6355667-T-C 6487626-T-C **
10843327-G-T **
15684412-C-A 13572532-C-A **
22055390-C-A 19893504-C-A **
14561408-C-A 12449609-C-A **
16583265-G-A 14471385-G-A **
10763873-C-A **
5205155-C-A 5337114-C-A **
21002545-C-G 18840659-C-G P4_Dst **
14727345-G-A 12615413-G-A **
18423915-T-A 16312035-T-A P6_Gap **
16305923-TCAAAAAAA-T 14194043-TCAAAAAAA-T **
3512525-G-T 3644484-G-T **
5189628-C-A 5321587-C-A **
13216579-C-A 11060903-C-A **
17500571-G-T 15388691-G-T **
10883366-G-T **
9116782-G-T 9279173-G-T **
13594439-C-A 11438763-C-A **
11026988-C-A **
6226079-C-T 6358038-C-T IR3_Dst **
17840391-C-A 15728511-C-A **
10658002-C-A **
7437458-C-A 7569417-C-A **
11022252-A-C **
18756146-C-A 16644266-C-A **
3961586-C-A 4093545-C-A **
16620398-C-A 14508518-C-A **
21048265-C-A 18886379-C-A **
11005257-C-A **
15218796-G-T 13106882-G-T **
7156724-C-A 7288683-C-A **
9936607-G-T 10098998-G-T **
10994304-C-T **
27810128-C-A 25663981-C-A P1_Y2 **
10994391-G-GCATTCCCTTC **
10994403-A-T **
18249870-C-A 16137990-C-A **
14661478-C-A 12549543-C-A **
13490405-C-A 11334729-C-A **
14468194-C-A 12347463-C-A **
23819090-C-A 21657204-C-A **
17591735-C-A 15479855-C-A **
16471548-C-A 14359668-C-A **
7042665-G-A 7174624-G-A **
6684146-G-A 6816105-G-A **
15424662-A-G 13312782-A-G **
28765388-C-A 26619241-C-A **
3289371-G-T 3421330-G-T **
3077856-T-C 3209815-T-C **
3080986-TA-T 3212945-TA-T 10×A**
3114519-T-C 3246478-T-C **
3165039-C-T 3296998-C-T **
3202791-G-C 3334750-G-C **
3202835-C-A 3334794-C-A **
3271486-T-C 3403445-T-C **
3283249-T-C 3415208-T-C **
3287724-C-A 3419683-C-A **
3296089-A-G 3428048-A-G **
2960102-A-G 3092061-A-G **
3384745-G-T 3516704-G-T **
3389997-C-A 3521956-C-A **
3445707-G-T 3577666-G-T **
3587316-A-G 3719275-A-G **
3587912-G-T 3719871-G-T **
3654211-C-G 3786170-C-G **
3654265-G-T 3786224-G-T **
3659707-G-T 3791666-G-T **
3678706-G-T 3810665-G-T **
3679660-A-AATT 3811619-A-AATT **
2993973-C-G 3125932-C-G **
2899191-C-A 3031150-C-A **
11026906-C-A **
10939479-C-G **
17940736-C-A 15828856-C-A **
22092665-C-A 19930779-C-A **
11022612-C-A **
10975981-G-C **
5873743-C-A 6005702-C-A **
10804187-C-A **
22085433-C-A 19923547-C-A **
5084307-A-T 5216266-A-T **
13488733-G-C 11333057-G-C **
16583258-G-A 14471378-G-A **
2771850-G-T 2903809-G-T **
19300792-C-A 17188912-C-A **
13579302-A-G 11423626-A-G **
11002199-C-A **
8912975-T-C 9044934-T-C **
15536326-C-A 13424446-C-A **
28504454-C-A 26358307-C-A **
4871950-C-A 5003909-C-A **
15728753-C-A 13616873-C-A **
19864081-T-TC 17752201-T-TC P5_Prx **
2682847-T-C 2814806-T-C **
21141100-C-A 18979214-C-A **
56887017-G-T **
19189516-C-T 17077636-C-T **
4951560-C-A 5083519-C-A **
5191317-C-T 5323276-C-T **
7183893-C-A 7315852-C-A **
14253141-G-C 12132435-G-C Y32359 **
5310231-C-A 5442190-C-A **
28605944-C-A 26459797-C-A **
15104834-A-G 12992922-A-G **
6355664-G-T 6487623-G-T **
26140245-C-A 23994098-C-A P1_Y1 **
10939486-G-T **
13234470-C-A 11078794-C-A **
14867116-G-T 12755186-G-T **
14036024-C-A 11915318-C-A **
15396606-C-A 13284726-C-A **
19415453-C-A 17303573-C-A **
13213664-G-T 11057988-G-T **
4805243-C-A 4937202-C-A **
22132813-C-A 19970927-C-A **
15104843-A-G 12992931-A-G **
10003491-C-A 10165882-C-A **
15104857-A-G 12992945-A-G **
20771927-A-AC 18610041-A-AC P4_Prx **
8043287-G-T 8175246-G-T **
3640725-C-T 3772684-C-T **
3622190-C-A 3754149-C-A **
13223592-A-C 11067916-A-C **
15866088-T-A 13754208-T-A **
13223607-GAACA-G 11067931-GAACA-G **
19189573-G-C 17077693-G-C **
4179184-C-A 4311143-C-A **
28632820-C-A 26486673-C-A **
14711923-C-A 12599990-C-A **
10660067-G-T **
22936321-A-T 20774435-A-T **
14785424-C-T 12673494-C-T **
10924392-T-TCC **
9836916-A-T 9999307-A-T **
11029348-T-C **
11026531-C-A **
13585195-C-A 11429519-C-A **
18121713-C-A 16009833-C-A **
6727587-G-A 6859546-G-A **
7033442-G-A 7165401-G-A **
4874291-G-T 5006250-G-T **
11021392-C-A **
10930898-C-A **
8153597-C-A 8285556-C-A **
14143024-C-A 12022318-C-A **
9116790-G-T 9279181-G-T **
21244103-C-A 19082217-C-A **
10843001-A-G **
21262574-C-A 19100688-C-A **
10843022-T-C **
15775772-C-A 13663892-C-A **
10844154-A-C **
24403893-C-A 22257746-C-A **
19622162-C-A 17510282-C-A P5_Prx **
10924403-A-C **
10924408-A-G **
10948356-TATTCC-T **
13846749-G-T 11726043-G-T **
16886786-C-A 14774906-C-A **
23825629-G-T 21663743-G-T **
2795598-C-A 2927557-C-A **
13898835-C-T 11778129-C-T **
7093228-C-A 7225187-C-A **
10753235-C-A **
10825290-C-GGGTTA ***
19436734-AAGAA-A,AAG 17324854-AAGAA-A,AAG ***
22173981-C-A 20012095-C-A ***
5965878-C-A 6097837-C-A ***
9028893-TAAAA-T 9191284-TAAAA-T 18×A***
10825285-C-T ***
56837268-G-T ***
14099267-CA-C 11978561-CA-C 10×A***
6867699-C-T 6999658-C-T ***
56840266-G-T ***
56839081-C-A ***
15641924-A-G 13530044-A-G CTS4432 ***
11028004-C-A ***
28719306-G-A 26573159-G-A ***
19369221-T-TA 17257341-T-TA 11×A***
8486934-CA-C,CAA 8618893-CA-C,CAA 12×A***
3836708-CT-C 3968667-CT-C 10×T***
13485596-G-A 11329920-G-A ***
21092185-C-T 18930299-C-T ***
13462260-C-T 11306584-C-T ***
19375351-T-C 17263471-T-C ***
13860474-C-A 11739768-C-A ***
4113116-TAAA-T 4245075-TAAA-T 16×A***
10942354-C-A ***
56848822-C-A ***
10843595-T-C ***
10887437-C-A ***
22857864-C-A 20695978-C-A ***
15364058-T-A,C 13252178-T-A,C ***
28062596-C-T 25916449-C-T P1_Y2 ***
10793983-C-A ***
17895194-TTTG-T,TTTT 15783314-TTTG-T,TTTT ***
10793997-T-C ***
10793998-C-T ***
15126702-C-A 13014789-C-A ***
11030271-G-C ***
6132086-C-A 6264045-C-A ***
10028858-C-A 10191249-C-A ***
13485619-C-A,T 11329943-C-A,T ***
10818683-A-G ***
10818671-C-T ***
9900368-A-C 10062759-A-C ***
16620119-T-C 14508239-T-C ***
17054915-G-GTATA 14943035-G-GTATA 10×TA***
8689316-C-A 8821275-C-A ***
16045079-A-G 13933199-A-G ***
8819241-G-A 8951200-G-A ***
15650560-C-A 13538680-C-A ***
8974365-C-A 9136756-C-A ***
8773877-C-A 8905836-C-A ***
8760505-A-C 8892464-A-C ***
16344400-C-CCTT,CCTTCTT 14232520-C-CCTT,CCTTCTT 5×CTT***
9108593-A-T ***
21616367-C-A 19454481-C-A ***
10873235-T-C ***
21584319-C-A 19422433-C-A ***
10860523-G-T ***
10860476-CT-C ***
23793293-C-A 21631407-C-A ***
3834820-G-A 3966779-G-A ***
15964623-G-T 13852743-G-T ***
15364055-G-C 13252175-G-C ***
13466422-G-A 11310746-G-A ***
16909202-A-T 14797322-A-T ***
18902946-T-A 16791066-T-A ***
28548572-CTT-C 26402425-CTT-C 10×T***
10842368-C-A ***
10831868-C-A ***
10829058-C-T ***
14768087-C-CAA 12656156-C-CAA 12×A***
10845803-C-A ***
6434918-A-C 6566877-A-C ***
6510348-A-G 6642307-A-G ***
7221663-C-A 7353622-C-A ***
22056233-C-A 19894347-C-A ***
56837271-G-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 153101981963279482177821304
Used in age calculations981963279482177821304
Counts of SNPs33
Variant counts last updated 2019-10-11 02:45:35.



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