Shea
BigY2: IN21410MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 IN21410 |
---|---|---|---|---|---|---|---|---|
26073559-C-T | 23927412-C-T | P1_Y1 | A* | |||||
20710044-C-T | 18548158-C-T | P4_Prx | A* | |||||
17458464-G-A | 15346584-G-A | BY184161 | Y | Y | + | |||
14243981-T-G | 12123275-T-G | BY184058 | Y | Y | + | |||
8572232-A-G | 8704191-A-G | BY184004 | Y | Y | + | |||
18566462-G-A | 16454582-G-A | BY184188 | Y | Y | + | |||
22651594-G-A | 20489708-G-A | BY184271 | Y | Y | + | |||
22473346-G-T | 20311460-G-T | BY53061 | DYZ19 | + | ||||
20825897-A-ATAAT | 18664011-A-ATAAT | P4_Gap | + | |||||
22255470-A-C | 20093584-A-C | DYZ19 | * | |||||
13323458-C-T | 11167782-C-T | ** | ||||||
13329312-G-T | 11173636-G-T | ** | ||||||
13456617-C-A | 11300941-C-A | ** | ||||||
13472665-T-C | 11316989-T-C | ** | ||||||
11665954-G-A | ** | |||||||
13288818-T-A | 11133142-T-A | ** | ||||||
13588390-T-A | 11432714-T-A | ** | ||||||
13653189-A-G | 11497513-A-G | ** | ||||||
13218678-C-A | 11063002-C-A | ** | ||||||
13700632-A-G | 11544956-A-G | ** | ||||||
11014388-A-G | ** | |||||||
10986769-G-T | ** | |||||||
11654404-G-T | ** | |||||||
11665860-A-G | ** | |||||||
5957089-TACAC-T | 6089048-TACAC-T | 12×AC | ** | |||||
11674952-G-A | ** | |||||||
14390091-T-C | 12269387-T-C | ** | ||||||
15116489-C-A | 13004576-C-A | ** | ||||||
15115154-C-A | 13003241-C-A | ** | ||||||
14919368-T-G | 12807433-T-G | ** | ||||||
14815880-C-A | 12703951-C-A | ** | ||||||
14764799-G-A | 12652868-G-A | ** | ||||||
14600584-C-A | 12488784-C-A | ** | ||||||
14464357-T-G | 12343630-T-G | ** | ||||||
14422374-A-T | 12301649-A-T | ** | ||||||
14345039-A-G | 12224334-A-G | ** | ||||||
13829220-A-G | 11708514-A-G | ** | ||||||
14241901-C-A | 12121195-C-A | ** | ||||||
14142476-C-A | 12021770-C-A | 5×ATT | ** | |||||
14128373-C-T | 12007667-C-T | ** | ||||||
13961684-A-G | 11840978-A-G | ** | ||||||
13935732-G-T | 11815026-G-T | ** | ||||||
13935688-C-A | 11814982-C-A | ** | ||||||
13922601-A-G | 11801895-A-G | ** | ||||||
13881452-C-A | 11760746-C-A | ** | ||||||
10964207-C-G | ** | |||||||
10964253-A-ACTCTT | ** | |||||||
10682507-C-CACATG | ** | |||||||
10835380-C-T | ** | |||||||
6930842-T-C | 7062801-T-C | ** | ||||||
7462634-A-T | 7594593-A-T | IR1_L | ** | |||||
7424299-A-G | 7556258-A-G | ** | ||||||
7409610-A-T | 7541569-A-T | ** | ||||||
7313533-G-A | 7445492-G-A | ** | ||||||
7185496-G-A | 7317455-G-A | ** | ||||||
7041532-AT-A | 7173491-AT-A | ** | ||||||
6978066-C-A | 7110025-C-A | ** | ||||||
6858595-T-TA | 6990554-T-TA | ** | ||||||
7713269-C-A | 7845228-C-A | ** | ||||||
6778993-C-A | 6910952-C-A | ** | ||||||
6767698-C-T | 6899657-C-T | ** | ||||||
2773548-G-T | 2905507-G-T | ** | ||||||
6637181-C-A | 6769140-C-A | ** | ||||||
6596015-A-T | 6727974-A-T | ** | ||||||
6540838-C-A | 6672797-C-A | ** | ||||||
6231594-A-G | 6363553-A-G | IR3_Dst | ** | |||||
7646643-G-T | 7778602-G-T | ** | ||||||
7753148-G-T | 7885107-G-T | ** | ||||||
10835343-C-T | ** | |||||||
9957895-G-T | 10120286-G-T | ** | ||||||
10835341-C-A | ** | |||||||
15137932-T-C | 13026019-T-C | ** | ||||||
10682503-A-ATAATATTACG | ** | |||||||
10033912-G-A | 10196303-G-A | ** | ||||||
10019741-G-T | 10182132-G-T | ** | ||||||
10012920-C-T | 10175311-C-T | ** | ||||||
10008270-C-A | 10170661-C-A | ** | ||||||
9957864-G-A | 10120255-G-A | ** | ||||||
7964659-A-G | 8096618-A-G | ** | ||||||
9934669-GA-G | 10097060-GA-G | ** | ||||||
9139997-CT-C | 9302388-CT-C | ** | ||||||
8712009-C-A | 8843968-C-A | ** | ||||||
8216538-G-T | 8348497-G-T | ** | ||||||
8166759-G-T | 8298718-G-T | ** | ||||||
8158975-T-C | 8290934-T-C | ** | ||||||
8076119-T-A | 8208078-T-A | ** | ||||||
8030029-TTAAAA-T | 8161988-TTAAAA-T | ** | ||||||
15128140-AC-T | 13016227-AC-T | ** | ||||||
15653267-C-A | 13541387-C-A | ** | ||||||
15212415-G-A | 13100501-G-A | ** | ||||||
22783004-T-C | 20621118-T-C | ** | ||||||
23291268-G-C | 21129382-G-C | ** | ||||||
23097960-C-A | 20936074-C-A | ** | ||||||
23059617-C-A | 20897731-C-A | ** | ||||||
22984295-G-T | 20822409-G-T | ** | ||||||
22984118-T-A | 20822232-T-A | ** | ||||||
22984112-C-A | 20822226-C-A | ** | ||||||
22868596-C-A | 20706710-C-A | 10×A | ** | |||||
22277503-TTCAGATGTGTCCAGAGTTTCCTTCTTC-T | 20115617-TTCAGATGTGTCCAGAGTTTCCTTCTTC-T | DYZ19 | ** | |||||
23475479-C-T | 21313593-C-T | ** | ||||||
22135614-C-T | 19973728-C-T | ** | ||||||
21678735-A-T | 19516849-A-T | ** | ||||||
21328721-G-A | 19166835-G-A | ** | ||||||
21315186-C-A | 19153300-C-A | ** | ||||||
21239028-C-A | 19077142-C-A | ** | ||||||
21141236-T-TC | 18979350-T-TC | ** | ||||||
20666776-T-TC | 18504890-T-TC | P4_Prx | ** | |||||
23358966-A-G | 21197080-A-G | ** | ||||||
23790356-T-A | 21628470-T-A | ** | ||||||
20644694-G-A | 18482808-G-A | P4_Prx | ** | |||||
28608358-C-T | 26462211-C-T | FT62307 | ** | |||||
56833883-TC-T | ** | |||||||
28773539-G-A | 26627392-G-A | ** | ||||||
28720346-T-C | 26574199-T-C | ** | ||||||
28674598-G-A | 26528451-G-A | ** | ||||||
28621926-G-T | 26475779-G-T | ** | ||||||
28620715-T-C | 26474568-T-C | ** | ||||||
28618405-A-T | 26472258-A-T | ** | ||||||
28607810-A-T | 26461663-A-T | FT62306 | ** | |||||
23808658-G-T | 21646772-G-T | ** | ||||||
28605353-T-G | 26459206-T-G | ** | ||||||
28598821-A-T | 26452674-A-T | ** | ||||||
28516879-C-A | 26370732-C-A | ** | ||||||
27719827-A-T | 25573680-A-T | P1_Y2 | ** | |||||
26204651-GA-G | 24058504-GA-G | P1_Y1 | ** | |||||
25974434-G-A | 23828287-G-A | P1_Y1 | ** | |||||
21777119-T-C | ** | |||||||
20644712-G-C | 18482826-G-C | P4_Prx | ** | |||||
20644689-T-C | 18482803-T-C | P4_Prx | ** | |||||
15279310-G-C | 13167409-G-C | ** | ||||||
16245992-T-A | 14134112-T-A | ** | ||||||
17192996-C-A | 15081116-C-A | ** | ||||||
17135875-T-C | 15023995-T-C | ** | ||||||
17042991-T-C | 14931111-T-C | ** | ||||||
16827566-G-A | 14715686-G-A | ** | ||||||
16713002-A-C | 14601122-A-C | ** | ||||||
16656671-T-C | 14544791-T-C | ** | ||||||
16492623-T-C | 14380743-T-C | ** | ||||||
16093029-T-C | 13981149-T-C | ** | ||||||
17306322-T-C | 15194442-T-C | ** | ||||||
16046860-C-A | 13934980-C-A | ** | ||||||
15946784-C-A | 13834904-C-A | ** | ||||||
15936699-T-A | 13824819-T-A | ** | ||||||
15776970-C-G | 13665090-C-G | ** | ||||||
6231559-G-T | 6363518-G-T | IR3_Dst | ** | |||||
15450152-T-A | 13338272-T-A | ** | ||||||
15323651-G-A | 13211769-G-A | ** | ||||||
17283444-C-A | 15171564-C-A | ** | ||||||
17379854-G-A | 15267974-G-A | ** | ||||||
20644675-A-T | 18482789-A-T | P4_Prx | ** | |||||
18825574-A-C | 16713694-A-C | ** | ||||||
20612207-G-T | 18450321-G-T | P4_Prx | ** | |||||
20137230-C-G | 18025350-C-G | P5_Dst | ** | |||||
20137229-T-C | 18025349-T-C | P5_Dst | ** | |||||
19415871-G-T | 17303991-G-T | ** | ||||||
19403966-C-A | 17292086-C-A | ** | ||||||
19324292-C-A | 17212412-C-A | ** | ||||||
19228793-C-A | 17116913-C-A | ** | ||||||
18767750-G-C | 16655870-G-C | ** | ||||||
17605578-GT-G | 15493698-GT-G | ** | ||||||
18701839-C-T | 16589959-C-T | ** | ||||||
18688263-C-A | 16576383-C-A | ** | ||||||
18687529-G-T | 16575649-G-T | ** | ||||||
18602139-G-A | 16490259-G-A | ** | ||||||
18280223-C-A | 16168343-C-A | P6_Prx | ** | |||||
18136202-G-A | 16024322-G-A | ** | ||||||
18085425-G-A | 15973545-G-A | ** | ||||||
17629350-C-A | 15517470-C-A | ** | ||||||
6231578-C-A | 6363537-C-A | IR3_Dst | ** | |||||
6648054-C-A | 6780013-C-A | ** | ||||||
6231543-G-T | 6363502-G-T | IR3_Dst | ** | |||||
6510263-C-A | 6642222-C-A | ** | ||||||
10992969-C-A | ** | |||||||
14021338-C-A | 11900632-C-A | ** | ||||||
10992957-A-T | ** | |||||||
10980739-C-A | ** | |||||||
10980738-C-A | ** | |||||||
28715880-C-A | 26569733-C-A | ** | ||||||
15320588-G-A | 13208694-G-A | Y93508 | ** | |||||
2817056-A-T | 2949015-A-T | 13×T | ** | |||||
13233453-C-A | 11077777-C-A | ** | ||||||
22040856-C-A | 19878970-C-A | ** | ||||||
7054073-C-A | 7186032-C-A | ** | ||||||
13866032-C-ATGGAA | 11745326-C-ATGGAA | ** | ||||||
26248129-T-C | 24101982-T-C | P1_Y1 | ** | |||||
9777506-T-A | 9939897-T-A | ** | ||||||
23097985-TTAA-T | 20936099-TTAA-T | 5×TAA | ** | |||||
24513582-C-A | 22367435-C-A | ** | ||||||
15753173-T-A | 13641293-T-A | ** | ||||||
17597888-C-A | 15486008-C-A | ** | ||||||
13482554-C-A | 11326878-C-A | ** | ||||||
13462271-C-A | 11306595-C-A | ** | ||||||
15495139-C-A | 13383259-C-A | ** | ||||||
9836916-A-T | 9999307-A-T | ** | ||||||
7613831-CAGAA-C | 7745790-CAGAA-C | ** | ||||||
5853911-C-T | 5985870-C-T | ** | ||||||
6114336-C-A | 6246295-C-A | ** | ||||||
14591813-CTTT-C | 12480013-CTTT-C | 12×T | ** | |||||
28497103-C-A | 26350956-C-A | ** | ||||||
5535109-C-A | 5667068-C-A | ** | ||||||
18328686-G-T | 16216806-G-T | P6_Prx | ** | |||||
14946273-G-A | 12834347-G-A | ** | ||||||
4230194-A-G | 4362153-A-G | ** | ||||||
14825843-G-T | 12713910-G-T | ** | ||||||
16897638-C-A | 14785758-C-A | ** | ||||||
7362070-T-A | 7494029-T-A | ** | ||||||
26167734-A-G | 24021587-A-G | P1_Y1 | ** | |||||
19847658-TTTTTG-T | 17735778-TTTTTG-T | P5_Prx | ** | |||||
13856361-T-G | 11735655-T-G | ** | ||||||
13856334-A-T | 11735628-A-T | ** | ||||||
19507216-C-A | 17395336-C-A | ** | ||||||
10682549-T-G | ** | |||||||
20326054-C-A | 18164168-C-A | P5_Dst | ** | |||||
10835372-C-A | ** | |||||||
7310607-C-A | 7442566-C-A | ** | ||||||
21875920-C-A | 19714034-C-A | ** | ||||||
10688039-C-A | ** | |||||||
10987849-C-G | ** | |||||||
9702932-G-A | 9865323-G-A | IR3_Prx | ** | |||||
13449509-TTCCAC-T | 11293833-TTCCAC-T | ** | ||||||
5785650-T-A | 5917609-T-A | ** | ||||||
13488861-G-A | 11333185-G-A | ** | ||||||
18412317-C-A | 16300437-C-A | P6_Gap | ** | |||||
10987858-C-T | ** | |||||||
4582441-G-A | 4714400-G-A | ** | ||||||
13488901-C-T | 11333225-C-T | ** | ||||||
17950825-AATATATATATATATATATATATATATATAT-A | 15838945-AATATATATATATATATATATATATATATAT-A | 27×AT | ** | |||||
16354883-G-A | 14243003-G-A | 9×A | ** | |||||
13330361-C-A | 11174685-C-A | ** | ||||||
17039073-G-A | 14927193-G-A | FT301532 | ** | |||||
13446804-GCCATTCCATTCCATT-G | 11291128-GCCATTCCATTCCATT-G | 12×CCATT | ** | |||||
17597175-G-T | 15485295-G-T | ** | ||||||
10987827-T-A | ** | |||||||
17402425-C-A | 15290545-C-A | ** | ||||||
18980523-GT-G | 16868643-GT-G | 8×T | ** | |||||
10992946-C-G | ** | |||||||
14143025-C-A | 12022319-C-A | 16×A | ** | |||||
13871483-C-A | 11750777-C-A | ** | ||||||
14467812-C-A | 12347081-C-A | ** | ||||||
21515854-C-A | 19353968-C-A | ** | ||||||
15491889-CTATA-C | 13380009-CTATA-C | 9×TA | ** | |||||
13856353-G-C | 11735647-G-C | ** | ||||||
13700634-C-T | 11544958-C-T | ** | ||||||
16316754-C-A | 14204874-C-A | ** | ||||||
15410517-C-A | 13298637-C-A | ** | ||||||
21732699-G-T | 19570813-G-T | ** | ||||||
17885578-C-A | 15773698-C-A | ** | ||||||
17428291-C-A | 15316411-C-A | ** | ||||||
7615284-C-T | 7747243-C-T | ** | ||||||
16829274-G-GA | 14717394-G-GA | 10×A | ** | |||||
7613830-T-A | 7745789-T-A | ** | ||||||
2685668-G-TT | 2817627-G-TT | ** | ||||||
27966853-T-A | 25820706-T-A | P1_Y2 | ** | |||||
9437277-C-A | 9599668-C-A | ** | ||||||
6356271-T-C | 6488230-T-C | ** | ||||||
8987997-G-T | 9150388-G-T | ** | ||||||
16146482-AG-A | 14034602-AG-A | P8_Dst | ** | |||||
8735550-C-A | 8867509-C-A | ** | ||||||
14041672-C-A | 11920966-C-A | ** | ||||||
13394954-C-A | 11239278-C-A | ** | ||||||
7690022-C-A | 7821981-C-A | ** | ||||||
10992975-A-C | ** | |||||||
28613087-C-A | 26466940-C-A | ** | ||||||
14310325-C-A | 12189619-C-A | ** | ||||||
14529088-C-T | 12417289-C-T | ** | ||||||
18022400-G-T | 15910520-G-T | ** | ||||||
20108239-AATAT-A | 17996359-AATAT-A | P5_Dst | 15×AT | ** | ||||
13225914-C-A | 11070238-C-A | ** | ||||||
10786415-GCATTCCATTCCATTCCATTCCATTGCATTC-G | ** | |||||||
17042980-A-T | 14931100-A-T | ** | ||||||
13936967-C-A | 11816261-C-A | ** | ||||||
7391842-A-G | 7523801-A-G | ** | ||||||
14432372-C-A | 12311645-C-A | ** | ||||||
18703207-C-A | 16591327-C-A | ** | ||||||
16897637-C-T | 14785757-C-T | ** | ||||||
14724423-C-A | 12612491-C-A | ** | ||||||
19461235-C-A | 17349355-C-A | ** | ||||||
13463610-C-A | 11307934-C-A | ** | ||||||
4103945-T-C | 4235904-T-C | FT60680 | ** | |||||
5562385-T-G | 5694344-T-G | ** | ||||||
5524893-G-C | 5656852-G-C | ** | ||||||
5459190-T-A | 5591149-T-A | ** | ||||||
5449960-T-A | 5581919-T-A | ** | ||||||
5247449-A-G | 5379408-A-G | ** | ||||||
5186768-G-C | 5318727-G-C | ** | ||||||
5059672-ACCCCCAC-A | 5191631-ACCCCCAC-A | ** | ||||||
3987168-T-A | 4119127-T-A | ** | ||||||
2729997-T-A | 2861956-T-A | ** | ||||||
3725618-G-A | 3857577-G-A | ** | ||||||
3492200-A-G | 3624159-A-G | ** | ||||||
3389778-C-A | 3521737-C-A | ** | ||||||
3251966-G-T | 3383925-G-T | ** | ||||||
3251935-T-C | 3383894-T-C | ** | ||||||
2948417-G-A | 3080376-G-A | ** | ||||||
2926512-T-C | 3058471-T-C | ** | ||||||
2778469-TG-T | 2910428-TG-T | ** | ||||||
16044740-C-A | 13932860-C-A | ** | ||||||
17014243-C-A | 14902363-C-A | ** | ||||||
10682529-T-G | ** | |||||||
15180166-G-T | 13068252-G-T | ** | ||||||
14611699-C-A | 12499905-C-A | ** | ||||||
7186783-C-A | 7318742-C-A | ** | ||||||
13935102-C-A | 11814396-C-A | ** | ||||||
21097254-C-A | 18935368-C-A | ** | ||||||
16896596-A-G | 14784716-A-G | FT76654 | ** | |||||
4103913-C-A | 4235872-C-A | ** | ||||||
7829678-C-A | 7961637-C-A | ** | ||||||
6318929-A-AG | 6450888-A-AG | IR3_Dst | ** | |||||
16598677-GAAA-G | 14486797-GAAA-G | 19×A | ** | |||||
21777091-A-T | ** | |||||||
23697499-C-A | 21535613-C-A | ** | ||||||
14467713-C-A | 12346982-C-A | ** | ||||||
21627034-T-C | 19465148-T-C | ** | ||||||
4374799-C-A | 4506758-C-A | ** | ||||||
4389667-C-A | 4521626-C-A | ** | ||||||
4960508-C-A | 5092467-C-A | FT386719 | ** | |||||
28687859-C-A | 26541712-C-A | ** | ||||||
10992942-C-T | ** | |||||||
18020772-C-A | 15908892-C-A | ** | ||||||
7163312-C-CTT | 7295271-C-CTT | 11×T | ** | |||||
2810399-C-A | 2942358-C-A | ** | ||||||
21490961-C-A | 19329075-C-A | ** | ||||||
56847392-G-T | ** | |||||||
10941459-C-A | ** | |||||||
23786342-C-T | 21624456-C-T | ** | ||||||
28725664-C-A | 26579517-C-A | ** | ||||||
5318378-C-A | 5450337-C-A | ** | ||||||
21732688-C-A | 19570802-C-A | ** | ||||||
14423206-C-A | 12302481-C-A | *** | ||||||
22881076-CTT-C,CT | 20719190-CTT-C,CT | 14×T | *** | |||||
22920825-C-A | 20758939-C-A | *** | ||||||
28777068-C-A | 26630921-C-A | *** | ||||||
17821825-GAA-G,GA | 15709945-GAA-G,GA | 17×A | *** | |||||
14802645-C-A | 12690716-C-A | *** | ||||||
15677505-CAAAA-C | 13565625-CAAAA-C | 16×A | *** | |||||
17950756-C-T | 15838876-C-T | *** | ||||||
21362541-AG-A | 19200655-AG-A | *** | ||||||
6751856-C-A | 6883815-C-A | *** | ||||||
14986693-A-T | 12874761-A-T | *** | ||||||
15250857-AT-A | 13138943-AT-A | *** | ||||||
13429978-C-A | 11274302-C-A | *** | ||||||
14463720-A-T | 12342993-A-T | *** | ||||||
13469955-C-T | 11314279-C-T | *** | ||||||
5200587-G-T | 5332546-G-T | *** | ||||||
10035428-G-A | 10197819-G-A | *** | ||||||
13470852-C-T | 11315176-C-T | *** | ||||||
10021795-G-A | 10184186-G-A | *** | ||||||
14227909-CT-C | 12107203-CT-C | *** | ||||||
13487943-C-A | 11332267-C-A | *** | ||||||
11017852-C-A | *** | |||||||
23061877-TCCAC-T | 20899991-TCCAC-T | *** | ||||||
56836955-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Haplotype Progression
The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.
DYS393 | DYS390 | DYS19 | DYS391 | DYS385 | DYS426 | DYS388 | DYS439 | DYS389i | DYS392 | DYS389ii | DYS458 | DYS459 | DYS455 | DYS454 | DYS447 | DYS437 | DYS448 | DYS449 | DYS464 | DYS460 | Y-GATA-H4 | YCAII | DYS456 | DYS607 | DYS576 | DYS570 | CDY | DYS442 | DYS438 | DYS531 | DYS578 | DYF395S1 | DYS590 | DYS537 | DYS641 | DYS472 | DYF406S1 | DYS511 | DYS425 | DYS413 | DYS557 | DYS594 | DYS436 | DYS490 | DYS534 | DYS450 | DYS444 | DYS481 | DYS520 | DYS446 | DYS617 | DYS568 | DYS487 | DYS572 | DYS640 | DYS492 | DYS565 | DYS710 | DYS485 | DYS632 | DYS495 | DYS540 | DYS714 | DYS716 | DYS717 | DYS505 | DYS556 | DYS549 | DYS589 | DYS522 | DYS494 | DYS533 | DYS636 | DYS575 | DYS638 | DYS462 | DYS452 | DYS445 | Y-GATA-A10 | DYS463 | DYS441 | Y-GGAAT-1B07 | DYS525 | DYS712 | DYS593 | DYS650 | DYS532 | DYS715 | DYS504 | DYS513 | DYS561 | DYS552 | DYS726 | DYS635 | DYS587 | DYS643 | DYS497 | DYS510 | DYS434 | DYS461 | DYS435 | FTY371 | FTY303 | FTY10 | FTY284 | FTY219 | FTY324 | FTY327 | FTY394 | DYS538 | FTY220 | FTY254 | FTY19 | FTY4 | DYS577 | FTY24 | FTY346 | FTY160 | FTY62 | FTY400 | FTY114 | FTY246 | FTY26 | FTY368 | FTY173 | FTY209 | FTY337 | FTY81 | FTY387 | FTY361 | FTY330 | FTY65 | FTY168 | FTY171 | FTY136 | FTY53 | FTY40 | FTY386 | FTY100 | FTY152 | FTY55 | FTY297 | FTY370 | FTY103 | FTY64 | FTY174 | FTY313 | FTY362 | FTY342 | FTY161 | FTY374 | FTY316 | FTY101 | FTY204 | DYS477 | FTY192 | DYS502 | FTY341 | DYS493 | FTY1 | FTY227 | DYS499 | FTY391 | FTY353 | FTY332 | FTY163 | DYS483 | FTY172 | FTY180 | DYS581 | FTY179 | FTY188 | FTY369 | FTY70 | FTY63 | DYS508 | FTY347 | FTY83 | FTY277 | FTY276 | FTY195 | FTY109 | FTY356 | FTY215 | FTY105 | FTY123 | FTY242 | FTY214 | FTY132 | FTY262 | FTY333 | FTY208 | DYF398B | FTY43 | FTY166 | FTY13 | FTY11 | DYS584 | DYS608 | FTY95 | FTY151 | FTY388 | FTY256 | DYS580 | FTY234 | FTY268 | FTY139 | FTY27 | FTY75 | DYS512 | FTY329 | FTY320 | FTY7 | FTY247 | FTY211 | DYS474 | FTY39 | FTY376 | FTY37 | FTY373 | DYS475 | FTY138 | FTY288 | FTY264 | FTY93 | FTY380 | FTY18 | FTY115 | DYS569 | FTY390 | FTY46 | FTY243 | FTY322 | FTY281 | FTY153 | FTY181 | FTY184 | FTY359 | FTY121 | FTY74 | FTY279 | DYS530 | FTY45 | DYS573 | DYS542 | FTY36 | FTY304 | FTY203 | FTY291 | FTY142 | FTY191 | FTY183 | FTY141 | FTY299 | FTY193 | FTY124 | FTY16 | FTY236 | FTY185 | FTY378 | FTY225 | FTY397 | FTY3 | FTY67 | FTY182 | FTY334 | DYS623 | FTY348 | FTY357 | FTY275 | FTY306 | FTY383 | FTY253 | FTY285 | DYS645 | FTY17 | FTY85 | DYS598 | FTY375 | FTY325 | FTY12 | FTY365 | FTY35 | FTY237 | FTY238 | FTY305 | FTY56 | FTY129 | FTY352 | FTY292 | FTY154 | DYS539 | FTY301 | FTY366 | FTY231 | DYS618 | FTY216 | FTY82 | FTY393 | FTY155 | FTY68 | FTY32 | FTY265 | FTY300 | FTY143 | FTY201 | FTY199 | FTY86 | FTY98 | FTY144 | DYS541 | DYS507 | FTY20 | FTY116 | FTY308 | FTY177 | FTY89 | FTY158 | FTY22 | FTY84 | FTY186 | FTY396 | FTY91 | FTY29 | FTY78 | FTY229 | FTY260 | FTY250 | FTY364 | DYS476 | FTY221 | FTY57 | FTY377 | FTY384 | DYS466 | FTY363 | FTY137 | FTY69 | FTY72 | FTY251 | FTY2 | FTY217 | FTY257 | FTY120 | FTY25 | FTY252 | FTY33 | FTY42 | FTY54 | FTY372 | DYS480 | FTY176 | FTY76 | FTY66 | FTY197 | FTY385 | FTY270 | FTY298 | FTY198 | FTY117 | DYS544 | FTY159 | FTY232 | FTY156 | FTY343 | FTY296 | FTY311 | FTY344 | FTY178 | FTY367 | FTY73 | FTY112 | FTY295 | DYS616 | FTY338 | FTY196 | FTY157 | FTY162 | DYS551 | FTY148 | FTY94 | FTY52 | FTY131 | FTY9 | FTY194 | FTY8 | FTY318 | FTY317 | FTY99 | FTY289 | FTY169 | FTY51 | FTY345 | FTY398 | FTY111 | FTY273 | FTY382 | FTY47 | FTY30 | FTY147 | DYS615 | FTY302 | FTY354 | FTY326 | FTY88 | FTY248 | FTY267 | FTY170 | FTY60 | DYS453 | FTY249 | FTY167 | DYS624 | FTY134 | FTY235 | FTY145 | FTY14 | FTY80 | FTY50 | DYS514 | FTY340 | DYS585 | DYS516 | FTY293 | FTY207 | FTY278 | FTY210 | DYS523 | FTY269 | FTY530 | FTY1156 | FTY1070 | FTY906 | FTY1004 | FTY331 | FTY31 | FTY226 | FTY335 | DYS583 | FTY339 | FTY113 | FTY280 | FTY255 | FTY59 | DYS620 | FTY349 | FTY130 | FTY119 | DYF398A | FTY58 | FTY127 | FTY321 | FTY92 | FTY392 | DYF392 | FTY290 | FTY312 | FTY135 | FTY150 | FTY294 | FTY244 | FTY48 | FTY282 | DYS489 | FTY272 | FTY239 | FTY258 | FTY49 | DYS574 | FTY41 | FTY905 | FTY1103 | FTY502 | FTY743 | FTY443 | FTY670 | FTY883 | DYS631 | FTY1042 | FTY510 | DYS389B | FTY512 | FTY837 | DYS642 | FTY407 | FTY935 | FTY563 | FTY1016 | FTY1091 | FTY1049 | FTY1155 | DYS602 | FTY587 | FTY635 | FTY904 | DYS543 | FTY1148 | FTY861 | FTY742 | FTY433 | FTY1039 | FTY71 | FTY259 | FTY108 | FTY336 | FTY44 | FTY233 | FTY274 | FTY34 | FTY942 | FTY1068 | FTY945 | FTY1051 | FTY658 | FTY625 | FTY800 | FTY818 | FTY971 | FTY509 | FTY1025 | FTY835 | FTY984 | DYS637 | FTY832 | FTY689 | FTY998 | FTY520 | FTY445 | FTY809 | FTY428 | FTY562 | FTY897 | FTY1064 | FTY1088 | FTY1052 | DYF405 | FTY310 | FTY189 | DYS488 | FTY283 | FTY28 | FTY578 | DYS484 | FTY858 | FTY596 | FTY915 | FTY446 | FTY452 | FTY1006 | FTY612 | FTY507 | FTY614 | FTY824 | FTY1055 | FTY690 | FTY2318 | FTY981 | FTY946 | FTY1040 | DYS718 | FTY15 | FTY2025 | DYS685u1 | DYS596u5 | FTY1511 | FTY769 | FTY923 | FTY1167 | FTY415 | FTY505 | FTY241 | FTY2263 | FTY517 | FTY2180 | FTY775 | DYS567 | FTY444 | FTY691 | FTY1120 | FTY223 | DYF393u3 | FTY1850 | FTY645 | FTY696 | FTY1166 | FTY991 | FTY912 | DYS551u4 | FTY447 | DYS518u3 | FTY875 | DYS536u1 | FTY585 | FTY896 | FTY731 | FTY401 | FTY2011 | FTY665 | FTY814 | FTY2050 | DYS626u3 | FTY750 | FTY471 | FTY985 | FTY589 | FTY420 | FTY921 | FTY457 | FTY657 | FTY1110 | FTY485 | FTY315 | FTY1852 | FTY1107 | FTY489 | FTY522 | FTY654 | FTY110 | FTY881 | DYS470 | FTY534 | FTY1101 | FTY1933 | FTY936 | FTY772 | FTY1047 | FTY2351 | FTY680 | FTY2254 | FTY1030 | FTY2083 | FTY287 | FTY797 | FTY2366 | FTY951 | FTY774 | FTY1116 | DYS621 | FTY885 | FTY1012 | DYF394u1 | FTY888 | FTY648 | FTY725 | FTY643 | FTY927 | FTY1022 | DYS559 | FTY933 | FTY633 | FTY900 | FTY1848 | FTY478 | FTY533 | FTY467 | FTY1900 | FTY421 | DYS612u5 | DYS595 | FTY668 | FTY1028 | DYS579 | FTY646 | FTY1026 | FTY801 | FTY432 | FTY2301 | FTY466 | FTY531 | FTY1083 | FTY997 | FTY1114 | FTY830 | FTY655 | FTY910 | FTY1143 | FTY572 | DYS506 | DYS558u2 | FTY1127 | FTY712 | FTY634 | FTY499 | FTY1094 | FTY724 | FTY535 | FTY552 | FTY430 | FTY588 | DYS609 | FTY961 | FTY813 | FTY656 | FTY839 | FTY882 | FTY789 | FTY459 | FTY1037 | FTY435 | FTY1157 | FTY1546 | FTY2242 | FTY720 | DYS614u10 | FTY887 | FTY473 | FTY816 | FTY1060 | FTY472 | FTY943 | FTY1482 | FTY565 | DYS629 | FTY891 | FTY438 | DYS582 | FTY468 | FTY649 | FTY606 | FTY792 | FTY1087 | FTY895 | DYS614u3 | FTY574 | FTY1556 | FTY560 | FTY694 | FTY1097 | DYS518u6 | FTY876 | FTY2443 | FTY990 | FTY934 | FTY465 | FTY1046 | FTY1312 | FTY751 | FTY1915 | FTY678 | FTY419 | FTY958 | FTY456 | DYS592u1 | FTY1172 | FTY416 | FTY650 | FTY808 | FTY1542 | DYS721u1 | FTY746 | FTY2233 | FTY892 | FTY845 | FTY1034 | FTY498 | DYF382u1 | FTY637 | DYS588 | FTY947 | DYS543u3 | FTY644 | DYS703 | DYS649 | FTY212 | FTY781 | FTY1106 | FTY592 | FTY848 | FTY940 | FTY903 | FTY1081 | FTY952 | DYS706u2 | FTY1084 | FTY700 | FTY482 | DYS625u7 | FTY960 | FTY586 | FTY1330 | FTY1119 | FTY1762 | FTY1010 | FTY417 | FTY716 | DYS627u3 | FTY1942 | FTY1067 | FTY841 | FTY1031 | FTY1082 | FTY1023 | FTY475 | FTY222 | FTY962 | FTY423 | FTY664 | DYS517u1 | FTY1076 | FTY1557 | FTY1154 | DYS681 | FTY1002 | DYS706u1 | FTY1174 | FTY986 | FTY651 | FTY886 | FTY1078 | DYS546u4 | FTY1092 | FTY2471 | FTY1111 | FTY461 | FTY323 | FTY1013 | FTY506 | FTY550 | FTY767 | FTY721 | DYS548 | FTY559 | DYS705 | FTY640 | FTY613 | FTY402 | FTY2426 | FTY755 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P312/S116 | 13 | 24 | 14 | 11 | 11-14 | 12 | 12 | 12 | 13 | 13 | 29 | 17 | 9-10 | 11 | 11 | 25 | 15 | 19 | 29 | 15-15-17-17 | 11 | 11 | 19-23 | 16 | 15 | 18 | 17 | 36-38 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 10 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 15 | 8 | 12 | 22 | 20 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 33 | 15 | 9 | 16 | 12 | 26 | 26 | 19 | 12 | 11 | 13 | 12 | 10 | 9 | 12 | 12 | 10 | 11 | 11 | 30 | 12 | 13 | 24 | 13 | 10 | 10 | 20 | 15 | 19 | 13 | 24 | 17 | 12 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
L21/S145 | 13 | 24 | 14 | 11 | 11-14 | 12 | 12 | 12 | 13 | 13 | 29 | 17 | 9-10 | 11 | 11 | 25 | 15 | 19 | 29 | 15-15-17-17 | 11 | 11 | 19-23 | 16 | 15 | 18 | 17 | 36-38 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 10 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 15 | 8 | 12 | 22 | 20 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 35 | 15 | 9 | 16 | 12 | 25 | 26 | 19 | 12 | 11 | 13 | 12 | 11 | 9 | 12 | 12 | 10 | 11 | 11 | 30 | 12 | 13 | 24 | 13 | 10 | 10 | 20 | 15 | 19 | 13 | 24 | 17 | 12 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Shea | 13 | 24 | 14 | 10 | 12-15 | 13 | 12 | 12 | 13 | 12 | 29 | 18 | 9-10 | 11 | 11 | 26 | 15 | 19 | 29 | 15-15-16-17 | 10 | 10 | 19-23 | 15 | 15 | 17 | 17 | 37-39 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 11 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 15 | 8 | 13 | 21 | 21 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 35 | 15 | 9 | 16 | 12 | 25 | 26 | 19 | 12 | 11 | 13 | 12 | 10 | 9 | 14 | 11 | 10 | 11 | 11 | 31 | 12 | 13 | 23 | 13 | 10 | 10 | 21 | 15 | 19 | 14 | 24 | 16 | 12 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 |
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: IN21410 | 9582168 | 7889230 | 7830607 |
Used in age calculations | 9582168 | 7889230 | 7830607 |
Counts of SNPs | 5 | 5 |
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