Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > FGC11210 > FGC11163 > ZZ33 > BY23490

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
45547
19935366-C-A 17823486-C-A P5_Prx A*
19600620-A-G 17488740-A-G P5_Prx YA*
19737458-G-C 17625578-G-C P5_Prx A*
19657939-A-T 17546059-A-T P5_Prx A*
24255265-C-T 22109118-C-T P3_b1 A*
22277609-T-A 20115723-T-A DYZ19 A*
19938363-C-T 17826483-C-T P5_Prx A*
21113531-C-A 18951645-C-A YYA*
28817504-A-T 26671357-A-T A*
6280378-G-C 6412337-G-C IR3_Dst A*
28817674-G-T 26671527-G-T A*
13687308-A-C 11531632-A-C A*
8282859-C-T 8414818-C-T BY71388 YY+
13671809-C-T 11516133-C-T BY43163 +
8454757-G-A 8586716-G-A BY72919 YY+
19070793-T-C 16958913-T-C BY126024 YY+
23834019-C-T 21672133-C-T BY148169 Y+
14318591-AG-A 12197885-AG-A +
14318594-AGGTGCC-A 12197888-AGGTGCC-A +
15781279-G-T 13669399-G-T BY104060 YY+
23160682-A-G 20998796-A-G BY143505 Y+
15750502-CTTTTTTT-C 13638622-CTTTTTTT-C 18×T+
7054638-TG-T 7186597-TG-T +
13855471-T-G 11734765-T-G BY33739 +
6745234-G-A 6877193-G-A BY61048 YY+
22508858-C-A 20346972-C-A BY225513 DYZ19 +
22270752-T-C 20108866-T-C BY215059 DYZ19 +
18233837-A-G 16121957-A-G BY121053 Y+
22006445-A-C 19844559-A-C BY137029 YY+
21401851-T-C 19239965-T-C BY132650 YY+
27918387-C-A 25772240-C-A BY226966 P1_Y2 +
23969109-C-T 21822962-C-T Y+
18689185-T-C 16577305-T-C BY123132 YY+
9443936-A-C 9606327-A-C BY79427 YY+
13647342-G-A 11491666-G-A BY86932 +
9122062-G-A 9284453-G-A BY78297 Y+
18599451-C-A 16487571-C-A BY122472 YY+
18075557-T-C 15963677-T-C Z28432 YY+
28785380-C-T 26639233-C-T BY44281 +
18557797-G-A 16445917-G-A BY122170 YY+
13660258-GTGGAA-G 11504582-GTGGAA-G 5×TGGAA*
16908451-TAAAAAAAA-T,TA 14796571-TAAAAAAAA-T,TA 21×A*
22269331-C-G 20107445-C-G DYZ19 *
28786656-GTGGAA-G 26640509-GTGGAA-G *
15930851-TTCC-T 13818971-TTCC-T **
16016532-C-A 13904652-C-A **
16366220-CA-C 14254340-CA-C 8×A**
17739972-A-C 15628092-A-C **
16354305-G-T 14242425-G-T **
15821415-C-A 13709535-C-A **
16329024-A-C 14217144-A-C **
17749409-T-A 15637529-T-A **
16311875-A-T 14199995-A-T **
16235134-A-G 14123254-A-G **
16181191-T-A 14069311-T-A **
16181152-T-A 14069272-T-A **
16181148-T-A 14069268-T-A **
16180811-G-C 14068931-G-C FT128829 **
16170129-GA-G 14058249-GA-G **
15843965-C-A 13732085-C-A **
15861082-CT-C 13749202-CT-C **
15936329-A-T 13824449-A-T **
18047485-G-T 15935605-G-T **
16008233-C-A 13896353-C-A **
15998805-C-A 13886925-C-A **
15874170-C-A 13762290-C-A **
18032250-GTGTGTA-G 15920370-GTGTGTA-G **
17739764-C-A 15627884-C-A **
17915129-A-T 15803249-A-T **
15956510-C-A 13844630-C-A **
15952428-C-A 13840548-C-A **
15903446-T-G 13791566-T-G **
17782547-G-T 15670667-G-T **
15914698-A-C 13802818-A-C **
17813754-T-C 15701874-T-C **
17834277-G-T 15722397-G-T **
17287352-C-T 15175472-C-T **
16432133-C-T 14320253-C-T **
16409049-C-G 14297169-C-G **
17159045-T-C 15047165-T-C **
17145334-A-G 15033454-A-G **
17158444-T-C 15046564-T-C **
17159035-G-A 15047155-G-A **
17159037-C-T 15047157-C-T **
17159038-A-G 15047158-A-G **
17383708-G-T 15271828-G-T **
17159040-A-G 15047160-A-G **
17345588-A-T 15233708-A-T **
17039225-A-C 14927345-A-C **
17159051-A-G 15047171-A-G **
17159058-G-C 15047178-G-C **
17201847-G-T 15089967-G-T **
17212409-C-A 15100529-C-A **
17327423-C-A 15215543-C-A **
17287330-C-T 15175450-C-T FT169608 **
17287338-T-C 15175458-T-C **
17110984-C-A 14999104-C-A **
17023340-C-A 14911460-C-A **
17287345-A-T 15175465-A-T **
17548781-G-A 15436901-G-A **
16514118-C-A 14402238-C-A **
16593772-T-G 14481892-T-G **
16599026-T-G 14487146-T-G **
17711983-C-A 15600103-C-A **
17684538-T-G 15572658-T-G **
16618722-C-A 14506842-C-A **
16679259-C-A 14567379-C-A **
16698588-A-G 14586708-A-G BY109522 **
17003229-C-A 14891349-C-A **
16731745-C-A 14619865-C-A **
16737992-G-T 14626112-G-T **
16846325-T-G 14734445-T-G **
16874693-A-G 14762813-A-G **
17503251-G-T 15391371-G-T **
15794830-G-T 13682950-G-T **
17412332-T-C 15300452-T-C **
17390070-T-A 15278190-T-A **
17994873-AC-A 15882993-AC-A P7_Prx **
15359422-T-A 13247542-T-A **
15793015-G-C 13681135-G-C **
10977918-C-A **
10906241-T-G **
10912748-A-T **
10924866-C-A **
10935762-T-G **
10961415-C-CCTCTT **
10965372-T-G **
10972509-G-T **
11001624-C-A **
10903997-G-A **
11003203-C-A **
11005456-T-A **
11008161-G-T **
11011402-T-G **
13223520-A-C 11067844-A-C **
13231229-C-A 11075553-C-A **
13235098-C-A 11079422-C-A **
13236300-C-T 11080624-C-T FT219077 **
10904004-G-A **
10903986-G-A **
13350950-C-T 11195274-C-T **
10808551-C-A **
10772819-G-T **
10776269-C-T **
10780640-C-T **
10783854-C-A **
10787361-A-T **
10792613-C-A **
10794369-C-A **
10799344-A-G **
10815104-C-A **
10903982-G-C **
10828182-C-T **
10834240-G-T **
10836458-C-A **
10865052-C-A **
10865291-C-A **
10865670-T-C **
10882052-C-A **
10885234-TC-T **
13322463-T-A 11166787-T-A **
13350960-A-G 11195284-A-G **
15756200-C-T 13644320-C-T **
15352919-C-A 13241038-C-A **
15151366-G-T 13039453-G-T **
15177352-A-T 13065438-A-T **
15218654-C-A 13106740-C-A **
15231963-T-C 13120049-T-C **
15235020-C-A 13123106-C-A **
15235574-C-A 13123660-C-A **
15269523-C-A 13157612-C-A **
15323968-C-A 13212086-C-A **
15413322-C-A 13301442-C-A **
12877284-TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-T 46×A**
15449846-A-T 13337966-A-T **
15566664-A-T 13454784-A-T **
15584681-A-G 13472801-A-G **
15611953-C-T 13500073-C-T **
15721560-C-A 13609680-C-A **
15724264-A-T 13612384-A-T **
15724307-C-A 13612427-C-A **
15733359-C-A 13621479-C-A **
15064287-C-A 12952379-C-A **
14967124-T-G 12855199-T-G **
13734117-G-T 11578441-G-T **
14367565-G-T 12246861-G-T **
11665187-G-T **
13856223-A-T 11735517-A-T **
13885989-T-C 11765283-T-C **
14086080-T-G 11965374-T-G **
14184510-A-T 12063804-A-T **
14255998-G-T 12135292-G-T **
14286163-TG-T 12165457-TG-T **
14296430-G-T 12175724-G-T **
14369192-G-T 12248488-G-T **
14857183-C-A 12745249-C-A **
14448415-C-A 12327688-C-A **
14482966-C-A 12362235-C-A **
14540119-T-C 12428320-T-C **
14622250-C-A 12510448-C-A **
14701016-G-A 12589082-G-A **
14718883-T-G 12606951-T-G **
14723918-C-A 12611986-C-A **
14747367-C-CTA 12635436-C-CTA **
18071002-C-A 15959122-C-A **
18708168-C-A 16596288-C-A **
18085006-C-A 15973126-C-A **
23884656-G-T 21722770-G-T **
23438307-C-A 21276421-C-A **
23447368-C-A 21285482-C-A **
23454993-T-C 21293107-T-C **
23493387-C-A 21331501-C-A **
23596878-T-C 21434992-T-C **
23787545-C-A 21625659-C-A **
23824332-C-A 21662446-C-A **
23849836-A-C 21687950-A-C **
23884663-C-A 21722777-C-A **
23352442-A-C 21190556-A-C **
23884664-A-C 21722778-A-C **
23899356-C-A 21737470-C-A **
23899379-A-T 21737493-A-T **
23899396-G-T 21737510-G-T **
24404181-G-T 22258034-G-T **
24458082-G-T 22311935-G-T **
24503070-C-A 22356923-C-A **
24601390-T-G 22455243-T-G P3_t2 **
23433485-C-A 21271599-C-A **
23304520-T-C 21142634-T-C **
24910859-T-TAA 22764712-T-TAA g1 **
22800685-T-G 20638799-T-G FT129325 **
22231954-A-T 20070068-A-T DYZ19 **
22231969-A-T 20070083-A-T DYZ19 **
22426876-T-C 20264990-T-C DYZ19 **
22472293-C-A 20310407-C-A DYZ19 **
22529139-C-A 20367253-C-A **
22552367-C-A 20390481-C-A **
22773359-C-A 20611473-C-A **
22783177-G-T 20621291-G-T **
22854255-G-T 20692369-G-T **
23087752-C-A 20925866-C-A **
22875933-C-A 20714047-C-A **
22884687-G-T 20722801-G-T **
22903695-C-A 20741809-C-A **
22932576-T-A 20770690-T-A **
22932577-T-G 20770691-T-G **
22934046-T-A 20772160-T-A **
23029813-G-T 20867927-G-T **
23034387-T-G 20872501-T-G **
24601429-T-G 22455282-T-G P3_t2 **
25871799-G-T 23725652-G-T P1_Y1 **
22168882-G-T 20006996-G-T **
28596777-A-T 26450630-A-T **
28225276-G-T 26079129-G-T P1_b4 **
28360493-A-AAAG 26214346-A-AAAG P1_gr2 **
28521268-T-G 26375121-T-G **
28551772-C-A 26405625-C-A **
28577872-C-A 26431725-C-A FT27155 **
28596768-G-T 26450621-G-T **
28596773-C-T 26450626-C-T **
28596774-T-G 26450627-T-G **
28627654-C-A 26481507-C-A **
28019679-T-A 25873532-T-A P1_Y2 **
28761280-G-T 26615133-G-T **
28801851-A-C 26655704-A-C **
28814119-G-C 26667972-G-C **
56823243-T-A **
56843051-G-T **
56848335-C-A **
56880097-T-A **
18232-C-A **
28019695-T-A 25873548-T-A P1_Y2 **
28019668-T-A 25873521-T-A P1_Y2 **
26010640-A-T 23864493-A-T P1_Y1 **
26730392-A-T 24584245-A-T P1_g2 **
26010651-C-A 23864504-C-A P1_Y1 **
26010662-A-T 23864515-A-T P1_Y1 **
26010680-C-A 23864533-C-A P1_Y1 **
26222787-A-T 24076640-A-T P1_Y1 **
26222805-A-T 24076658-A-T P1_Y1 **
26222809-A-T 24076662-A-T P1_Y1 **
26392947-G-T 24246800-G-T P1_Y1 **
26514881-C-A 24368734-C-A P1_Y1 **
27189939-G-T 25043792-G-T P1_g3 **
28019660-T-A 25873513-T-A P1_Y2 **
27829236-T-A 25683089-T-A P1_Y2 **
27886643-G-T 25740496-G-T P1_Y2 **
27945446-G-C 25799299-G-C P1_Y2 **
27945447-G-C 25799300-G-C P1_Y2 **
27945454-T-A 25799307-T-A P1_Y2 **
27945455-T-A 25799308-T-A P1_Y2 **
27945491-T-A 25799344-T-A P1_Y2 **
28019654-T-A 25873507-T-A P1_Y2 **
22185550-G-A 20023664-G-A **
22115566-C-G 19953680-C-G **
18267136-G-A 16155256-G-A **
19202847-G-A 17090967-G-A **
19054135-C-A 16942255-C-A **
19054355-T-C 16942475-T-C **
19057888-AAG-A 16946008-AAG-A **
19060096-G-T 16948216-G-T **
19127738-G-T 17015858-G-T **
19144024-C-A 17032144-C-A **
19181651-G-T 17069771-G-T **
19202846-T-C 17090966-T-C **
19205748-T-A 17093868-T-A **
19034190-C-A 16922310-C-A **
19206603-G-T 17094723-G-T **
19302570-C-A 17190690-C-A **
19333229-ATTTTTTT-A 17221349-ATTTTTTT-A 21×T**
19338194-T-G 17226314-T-G **
19532336-C-A 17420456-C-A **
19643587-C-A 17531707-C-A P5_Prx **
19721436-C-A 17609556-C-A P5_Prx **
19791552-A-G 17679672-A-G P5_Prx **
19047366-G-T 16935486-G-T **
19005149-T-G 16893269-T-G **
19797921-G-T 17686041-G-T P5_Prx **
18670162-C-A 16558282-C-A **
18302876-C-A 16190996-C-A P6_Prx **
18302889-T-A 16191009-T-A P6_Prx **
18302890-C-A 16191010-C-A P6_Prx **
18302905-C-A 16191025-C-A P6_Prx **
18302924-T-A 16191044-T-A P6_Prx **
18353302-A-T 16241422-A-T P6_Prx **
18621543-C-A 16509663-C-A **
18628015-A-G 16516135-A-G **
18692791-A-G 16580911-A-G FT129075 **
19005129-TA-T 16893249-TA-T **
10751414-C-A **
18753462-G-T 16641582-G-T **
18757992-C-A 16646112-C-A **
18783906-C-A 16672026-C-A **
18829919-C-A 16718039-C-A **
18927543-C-A 16815663-C-A **
18930048-T-C 16818168-T-C **
18978622-C-A 16866742-C-A **
19797877-G-T 17685997-G-T P5_Prx **
19797932-A-T 17686052-A-T P5_Prx **
22092274-C-A 19930388-C-A **
21666765-C-T 19504879-C-T **
21235745-C-A 19073859-C-A **
21235793-A-G 19073907-A-G **
21255162-C-A 19093276-C-A FT188707 **
21371770-A-C 19209884-A-C **
21443129-A-T 19281243-A-T **
21468942-C-A 19307056-C-A **
21473662-C-A 19311776-C-A **
21545422-G-T 19383536-G-T **
21666779-T-C 19504893-T-C **
21107236-G-T 18945350-G-T **
21666780-C-A 19504894-C-A **
21666795-G-A 19504909-G-A **
21953669-A-C 19791783-A-C **
21972102-C-A 19810216-C-A **
21988068-T-C 19826182-T-C **
22023419-T-C 19861533-T-C **
22068170-C-A 19906284-C-A **
22085648-C-A 19923762-C-A **
21214093-C-A 19052207-C-A **
21091512-A-G 18929626-A-G FGC71667 **
19827613-A-T 17715733-A-T P5_Prx **
19839659-A-C 17727779-A-C P5_Prx **
19827627-G-T 17715747-G-T P5_Prx **
19827634-A-T 17715754-A-T P5_Prx **
19827635-A-T 17715755-A-T P5_Prx **
19827642-C-A 17715762-C-A P5_Prx **
19837106-A-T 17725226-A-T P5_Prx **
19837117-A-T 17725237-A-T P5_Prx **
19837126-A-T 17725246-A-T P5_Prx **
19839656-A-C 17727776-A-C P5_Prx **
19950209-T-A 17838329-T-A P5_Prx **
21033877-C-A 18871991-C-A **
20469733-G-C 18307847-G-C P5_Dst **
20669296-G-T 18507410-G-T P4_Prx **
20747178-G-T 18585292-G-T P4_Prx **
20747185-C-A 18585299-C-A P4_Prx **
20747194-C-A 18585308-C-A P4_Prx **
20747208-G-T 18585322-G-T P4_Prx **
20747217-C-A 18585331-C-A P4_Prx **
20825672-C-A 18663786-C-A P4_Gap **
10755282-C-A **
10927135-C-T **
10660513-C-T **
2798566-A-G 2930525-A-G **
9992261-C-A 10154652-C-A **
14812489-C-A 12700560-C-A **
14844567-C-A 12732633-C-A **
22602577-C-A 20440691-C-A **
22662442-G-T 20500556-G-T **
10912405-C-A **
15611946-C-T 13500066-C-T **
21162274-C-A 19000388-C-A **
15611952-T-C 13500072-T-C **
15611957-T-C 13500077-T-C **
14747363-G-T 12635432-G-T **
20469727-A-C 18307841-A-C P5_Dst **
10633222-A-T **
10633226-C-T **
28596767-T-C 26450620-T-C **
10924136-G-T **
10747965-C-A **
10632584-C-A **
21281783-G-A 19119897-G-A FT188717 **
10809554-TATTCCATTCCATTCC-T **
17402273-C-A 15290393-C-A **
16054265-C-A 13942385-C-A **
10757892-C-A FGC78839 **
13735365-T-A 11579689-T-A **
23734347-G-T 21572461-G-T 5×GCA**
28772297-C-A 26626150-C-A **
14649637-A-G 12537702-A-G **
21334630-C-T 19172744-C-T **
14324659-C-A 12203953-C-A **
10983959-C-G **
10656693-A-G **
16412550-C-A 14300670-C-A **
8718255-A-C 8850214-A-C **
10659115-C-A **
19373867-C-A 17261987-C-A **
10866444-G-A FT178505 **
10995769-C-A **
14380686-C-A 12259982-C-A **
22122840-G-T 19960954-G-T **
23098129-A-T 20936243-A-T **
23098132-A-T 20936246-A-T **
9234281-C-A 9396672-C-A **
23098148-T-C 20936262-T-C **
17501453-G-T 15389573-G-T **
9025029-C-A 9187420-C-A **
2960098-A-T 3092057-A-T **
6982831-C-A 7114790-C-A **
10780611-T-A **
10633241-C-A **
2665789-T-G 2797748-T-G **
20469715-CAAA-C 18307829-CAAA-C P5_Dst **
9942237-T-A 10104628-T-A **
5888331-C-A 6020290-C-A **
7626030-C-A 7757989-C-A **
17843180-C-A 15731300-C-A **
22074117-C-A 19912231-C-A **
7619178-C-A 7751137-C-A **
10760340-C-A **
10629636-C-G **
22904359-C-A 20742473-C-A **
17844264-C-A 15732384-C-A **
11003745-C-A **
9732749-T-G 9895140-T-G IR3_Prx **
14085909-C-A 11965203-C-A **
56848362-C-A **
10923656-A-G **
11037068-C-A **
14310360-C-A 12189654-C-A **
19187421-C-A 17075541-C-A **
22115569-C-G 19953683-C-G **
19263477-A-G 17151597-A-G **
10866304-T-G **
15332804-C-A 13220922-C-A **
8649542-C-A 8781501-C-A **
20434785-G-T 18272899-G-T P5_Dst **
16240164-C-A 14128284-C-A **
11673076-C-A **
19235824-C-A 17123944-C-A **
11664756-G-T **
10631442-C-A **
21656826-G-T 19494940-G-T **
14696439-C-A 12584505-C-A **
17065019-G-T 14953139-G-T **
28768906-C-A 26622759-C-A **
20943519-TG-T 18781633-TG-T P4_Dst **
6865329-T-C 6997288-T-C **
5957018-C-A 6088977-C-A **
22919325-G-GTT 20757439-G-GTT 20×T**
16763871-C-A 14651991-C-A **
10799323-A-T **
4438411-A-T 4570370-A-T **
23252635-G-T 21090749-G-T **
23824942-C-A 21663056-C-A **
10669540-ATTCCG-A **
5910788-C-A 6042747-C-A **
24904652-C-A 22758505-C-A g1 **
6403659-C-A 6535618-C-A **
10666659-C-A **
23115122-C-A 20953236-C-A **
18328823-G-C 16216943-G-C P6_Prx **
23257941-C-A 21096055-C-A **
10888301-C-A **
10931073-T-C **
10838940-G-T **
17158440-T-C 15046560-T-C **
10023018-C-A 10185409-C-A **
16176510-C-A 14064630-C-A **
10888288-T-A **
10019701-C-A 10182092-C-A **
10799325-CTTCAT-C **
14272826-C-A 12152120-C-A **
10901532-C-A **
20669311-G-T 18507425-G-T P4_Prx **
4093863-C-A 4225822-C-A **
6403673-G-T 6535632-G-T **
6130201-T-A 6262160-T-A **
28742651-C-A 26596504-C-A **
19202839-A-G 17090959-A-G **
2730000-C-A 2861959-C-A **
14220996-C-A 12100290-C-A **
19340659-C-A 17228779-C-A **
16653273-C-A 14541393-C-A **
13872301-C-A 11751595-C-A **
11014648-C-A **
6971728-A-G 7103687-A-G **
23098145-T-C 20936259-T-C **
10861632-C-A **
18913590-C-A 16801710-C-A **
10859084-C-A **
11005495-C-T **
11003216-C-A **
16922196-C-A 14810316-C-A **
15988187-C-A 13876307-C-A **
4740566-G-A 4872525-G-A 9×A**
16519311-C-A 14407431-C-A **
11006559-G-T **
17994918-T-C 15883038-T-C P7_Prx **
15586247-C-A 13474367-C-A **
23899378-G-T 21737492-G-T **
9541580-G-T 9703971-G-T IR3_Prx **
15080121-G-A 12968211-G-A **
14749137-C-A 12637206-C-A **
21961673-C-A 19799787-C-A **
19950241-G-T 17838361-G-T P5_Prx **
23189607-C-A 21027721-C-A **
14401936-G-T 12281233-G-T **
8907525-C-A 9039484-C-A **
7136245-CAAA-C 7268204-CAAA-C 14×A**
6347612-A-C 6479571-A-C **
2702682-C-A 2834641-C-A **
7534718-C-T 7666677-C-T **
7382589-C-A 7514548-C-A **
7400129-A-C 7532088-A-C **
23262591-T-C 21100705-T-C **
7412863-G-T 7544822-G-T **
10983952-T-A **
20829826-C-A 18667940-C-A P4_Gap **
7629747-C-A 7761706-C-A **
7340993-T-A 7472952-T-A **
2767708-C-A 2899667-C-A **
7699122-T-C 7831081-T-C **
17287343-G-C 15175463-G-C **
18596095-T-C 16484215-T-C BY38575 **
7756718-T-G 7888677-T-G **
7829609-C-A 7961568-C-A **
7994372-C-A 8126331-C-A **
23262593-T-C 21100707-T-C **
7318731-T-A 7450690-T-A **
8022828-C-A 8154787-C-A **
22829590-A-C 20667704-A-C **
14103251-ATATG-A 11982545-ATATG-A 6×TATG**
7690054-C-A 7822013-C-A **
7029961-C-A 7161920-C-A FT110857 **
7078222-T-C 7210181-T-C **
7098440-A-T 7230399-A-T **
16427385-C-A 14315505-C-A **
17170189-G-TT 15058309-G-TT **
7287372-A-G 7419331-A-G **
7137340-C-A 7269299-C-A **
7180123-T-A 7312082-T-A **
19600452-G-T 17488572-G-T P5_Prx **
7189575-G-T 7321534-G-T **
7223439-C-A 7355398-C-A **
7237818-A-T 7369777-A-T **
7275371-G-T 7407330-G-T **
17122399-C-A 15010519-C-A **
8024395-A-C 8156354-A-C **
6971731-C-A 7103690-C-A **
9928982-G-T 10091373-G-T **
9666568-G-T 9828959-G-T IR3_Prx **
9732741-C-CA 9895132-C-CA IR3_Prx **
9785103-T-G 9947494-T-G FT128540 **
22231993-A-T 20070107-A-T DYZ19 **
9515468-C-CT 9677859-C-CT 10×T**
9852932-A-C 10015323-A-C **
9929707-G-T 10092098-G-T **
9482404-C-A 9644795-C-A **
9950532-G-T 10112923-G-T **
9974386-A-G 10136777-A-G **
9979260-C-A 10141651-C-A **
10022976-A-G 10185367-A-G **
10633221-C-T **
10652342-C-A **
10654948-C-A **
10022971-C-A 10185362-C-A **
9465831-A-G 9628222-A-G **
7904858-C-A 8036817-C-A **
8832318-G-T 8964277-G-T **
8140568-G-T 8272527-G-T FT65015 **
23470036-C-A 21308150-C-A **
21614764-C-A 19452878-C-A Z15516 **
8748321-T-C 8880280-T-C **
9966073-C-A 10128464-C-A **
8762149-T-C 8894108-T-C **
8776758-G-T 8908717-G-T **
9109687-G-T **
9398003-C-A 9560394-C-A **
9020564-A-T 9182955-A-T **
9059966-T-C 9222357-T-C **
16236233-A-AAAAC 14124353-A-AAAAC 8×AAAC**
9062041-A-C 9224432-A-C **
14498990-C-T 12387195-C-T PAGES00007 Page7 **
9178521-G-T 9340912-G-T **
9341016-C-A 9503407-C-A **
6971783-A-C 7103742-A-C **
7107291-C-A 7239250-C-A **
13958841-C-A 11838135-C-A **
3990785-C-A 4122744-C-A **
5935513-TATATAACAATCTGGAAAATAATAAAC-T 6067472-TATATAACAATCTGGAAAATAATAAAC-T **
5888249-A-T 6020208-A-T **
5861269-C-A 5993228-C-A **
9453931-G-A 9616322-G-A **
5145868-G-T 5277827-G-T **
23381150-C-A 21219264-C-A **
6741298-C-A 6873257-C-A **
10865271-T-C **
15038247-G-T 12926337-G-T **
4929490-A-T 5061449-A-T **
19202829-A-G 17090949-A-G **
4442939-T-A 4574898-T-A **
4299409-G-T 4431368-G-T **
19686890-G-GT 17575010-G-GT P5_Prx **
3876439-C-T 4008398-C-T **
14272820-C-A 12152114-C-A **
2798844-AT-A 2930803-AT-A **
2706830-C-A 2838789-C-A **
2781068-C-A 2913027-C-A **
2798573-T-C 2930532-T-C **
2798583-A-C 2930542-A-C **
2798586-G-A 2930545-G-A **
3640813-T-G 3772772-T-G **
2810361-T-G 2942320-T-G **
3758922-C-A 3890881-C-A **
2836517-A-C 2968476-A-C **
3276590-T-G 3408549-T-G **
3436445-A-T 3568404-A-T **
3436515-T-A 3568474-T-A **
3608764-C-T 3740723-C-T **
3659986-G-T 3791945-G-T **
6010423-C-A 6142382-C-A **
5115113-A-G 5247072-A-G **
16171300-C-A 14059420-C-A **
10799613-T-G **
6919716-C-A 7051675-C-A **
6919332-C-A 7051291-C-A **
10880725-T-C **
13976035-C-A 11855329-C-A **
6769440-C-A 6901399-C-A **
6769034-C-A 6900993-C-A **
6764047-C-A 6896006-C-A **
7200093-C-T 7332052-C-T **
17714033-C-T 15602153-C-T **
6491941-A-T 6623900-A-T **
6332367-G-C 6464326-G-C IR3_Dst **
6312233-C-A 6444192-C-A IR3_Dst **
6245511-C-A 6377470-C-A IR3_Dst **
9482503-C-A 9644894-C-A **
10799642-C-G **
6130200-T-A 6262159-T-A **
17684537-T-G 15572657-T-G **
21443934-C-A 19282048-C-A **
6074683-T-G 6206642-T-G **
10903836-A-T **
22212250-C-A 20050364-C-A ***
23597137-C-A 21435251-C-A ***
17597154-CT-C,CTT 15485274-CT-C,CTT 20×T***
23805471-C-A 21643585-C-A ***
22699103-C-A 20537217-C-A ***
14774253-CTTTT-C 12662322-CTTTT-C 28×T***
23265606-CTT-C,CT 21103720-CTT-C,CT 15×T***
21140854-CTT-C,CT 18978968-CTT-C,CT 15×T***
22917754-C-T 20755868-C-T FT60353 ***
3865901-C-A 3997860-C-A ***
23732232-CA-C,CAA 21570346-CA-C,CAA 17×A***
58972889-C-A 56826742-C-A ***
6757346-C-A 6889305-C-A ***
7142790-C-A 7274749-C-A ***
11643720-AATTG-A ***
6085558-C-A 6217517-C-A ***
6956695-CA-C 7088654-CA-C 9×A***
10666970-G-T ***
22834573-A-G 20672687-A-G ***
4930160-G-T 5062119-G-T ***
23393030-C-A 21231144-C-A ***
23485351-C-A 21323465-C-A ***
19034756-CAA-C,CA 16922876-CAA-C,CA 15×A***
7750737-G-A 7882696-G-A Y9619 Z8801 ***
23022864-C-A 20860978-C-A ***
24363080-C-A 22216933-C-A ***
23337809-C-A 21175923-C-A ***
6458000-C-A 6589959-C-A ***
23979561-C-A 21833414-C-A ***
28766105-C-A 26619958-C-A ***
22684496-C-A 20522610-C-A ***
10796683-A-C ***
23597062-C-A 21435176-C-A ***
23977114-CA-C,CAA 21830967-CA-C,CAA 13×A***
13466369-C-A 11310693-C-A ***
11018837-C-A ***
23597066-C-A 21435180-C-A ***
14574176-C-A 12462376-C-A ***
22792529-C-A 20630643-C-A ***
10958268-C-A ***
21961261-C-A 19799375-C-A ***
15565903-A-G 13454023-A-G ***
14820414-C-A 12708481-C-A ***
6922820-T-A 7054779-T-A ***
6778883-C-A 6910842-C-A ***
15200158-C-A 13088244-C-A ***
6734680-C-A 6866639-C-A 21×T***
6733807-C-A 6865766-C-A ***
6658608-C-A 6790567-C-A ***
15472288-G-T 13360408-G-T ***
15479429-C-A 13367549-C-A ***
15512615-C-A 13400735-C-A ***
15559438-T-A 13447558-T-A ***
6117901-C-A 6249860-C-A ***
7126524-CTTTT-C,CTT 7258483-CTTTT-C,CTT 23×T***
15616162-C-A 13504282-C-A ***
15681939-A-G 13570059-A-G ***
6063972-C-A 6195931-C-A ***
15725069-C-A 13613189-C-A ***
5620983-T-A 5752942-T-A ***
5125952-C-A 5257911-C-A ***
5107567-G-T 5239526-G-T ***
4930172-G-T 5062131-G-T ***
15870361-C-A 13758481-C-A ***
4889568-C-A 5021527-C-A ***
15931189-C-A 13819309-C-A ***
4229644-C-A 4361603-C-A ***
14777630-C-A 12665699-C-A ***
14614225-G-A 12502423-G-A ***
15981233-C-A 13869353-C-A ***
8346762-G-T 8478721-G-T ***
10629653-A-C ***
9995088-C-A 10157479-C-A ***
9849892-C-A 10012283-C-A ***
9812047-C-A 9974438-C-A ***
9493711-C-A 9656102-C-A ***
10880321-C-A,T ***
9090727-C-A 9253118-C-A ***
10912544-G-A ***
8783528-C-A 8915487-C-A ***
8756890-C-A 8888849-C-A ***
8723507-C-A 8855466-C-A ***
8440701-G-T 8572660-G-T ***
8033863-G-T 8165822-G-T ***
14467568-C-A 12346837-C-A ***
7998862-G-T 8130821-G-T ***
13474104-C-A 11318428-C-A ***
13482956-C-A 11327280-C-A ***
13489011-CAT-C,CTT 11333335-CAT-C,CTT ***
13489018-CT-C,T 11333342-CT-C,T ***
7730638-C-A 7862597-C-A ***
11643321-A-G ***
7471526-C-A 7603485-C-A IR1_L ***
14059920-C-A 11939214-C-A ***
14152477-C-A 12031771-C-A ***
14281723-C-A 12161017-C-A ***
14316117-G-T 12195411-G-T ***
15969929-C-A 13858049-C-A ***
16186132-C-A 14074252-C-A ***
14827200-C-A 12715267-C-A ***
15787885-C-A 13676005-C-A ***
18805140-C-T 16693260-C-T ***
18892854-GAAA-G,GAA 16780974-GAAA-G,GAA 13×A***
21799584-C-A 19637698-C-A ***
11664330-C-A ***
19088647-C-A 16976767-C-A ***
10946659-C-A ***
19263066-C-A 17151186-C-A ***
19266272-C-A 17154392-C-A ***
10924392-TATTCC-T,TTTTTC ***
19367375-C-A 17255495-C-A ***
19395212-C-A 17283332-C-A ***
22537779-C-A 20375893-C-A ***
21148113-C-A 18986227-C-A ***
18679925-CAAAA-C,CAAA 16568045-CAAAA-C,CAAA 25×A***
13465959-C-T 11310283-C-T ***
21934980-A-ATT 19773094-A-ATT 17×T***
21306837-G-T 19144951-G-T ***
21429866-CA-C 19267980-CA-C ***
21447644-C-A 19285758-C-A ***
21471545-C-A 19309659-C-A ***
21473532-C-A 19311646-C-A ***
10916089-G-T ***
15129782-G-T 13017869-G-T ***
8217042-C-A 8349001-C-A ***
21690909-CAA-C,CAAAA 19529023-CAA-C,CAAAA 14×A***
21771761-G-T 19609875-G-T ***
3626037-C-A 3757996-C-A ***
15191363-C-A 13079449-C-A ***
16280874-C-A 14168994-C-A ***
9730693-C-A 9893084-C-A IR3_Prx ***
16425147-A-G 14313267-A-G BY107698 ***
16441173-C-A 14329293-C-A ***
16506515-C-A 14394635-C-A ***
2701721-C-A 2833680-C-A ***
16519449-C-A 14407569-C-A ***
2668071-T-A 2800030-T-A ***
16679099-A-ATT 14567219-A-ATT 25×T***
23351487-AT-A 21189601-AT-A 9×T***
16828185-C-A 14716305-C-A ***
16850949-G-T 14739069-G-T ***
16854756-C-A 14742876-C-A ***
13575730-C-A 11420054-C-A ***
14701743-C-A 12589809-C-A ***
15354919-C-A 13243038-C-A ***
17179104-C-A 15067224-C-A ***
3407230-C-A 3539189-C-A ***
9073219-CT-C,CTT 9235610-CT-C,CTT 15×T***
17412340-C-A 15300460-C-A ***
10937374-C-G ***
17923894-T-TA 15812014-T-TA ***
17978562-C-A 15866682-C-A ***
9520175-C-A 9682566-C-A ***
18193906-C-A 16082026-C-A ***
27699842-A-G 25553695-A-G P1_Y2 ***
10016838-C-A 10179229-C-A ***
16604865-C-A 14492985-C-A ***
24316-A-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 45547838791368681996820348
Used in age calculations838791368681996820348
Counts of SNPs1517
Variant counts last updated 2020-03-02 03:20:28.



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