Tree Position

R-P312/S116 > Z46521 > Z46516 > ZZ11 > U152/S28 > L2/S139 > Z41150 > Z49 > Z142/S211 > Z150 > CTS9490 > S7404 > A8452

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY2
IN33860
BigY3
IN33860
hg38:Y:10804476-C-G A+
hg19:Y:7097256-G-T hg38:Y:7229215-G-T FTA51831 YYA+
hg19:Y:9654084-G-GA hg38:Y:9816475-G-GA IR3_Prx 14×AA*
hg19:Y:6298030-G-GT hg38:Y:6429989-G-GT IR3_Dst 8×TA*
hg19:Y:59017525-C-T hg38:Y:56871378-C-T A*
hg19:Y:13140543-C-T hg38:Y:10630029-C-T A*
hg19:Y:13449982-C-G hg38:Y:11294306-C-G A*
hg38:Y:10688012-T-A A*
hg38:Y:10794235-A-G A*
hg19:Y:13712773-G-A hg38:Y:11557097-G-A DYZ17 A*
hg19:Y:13811092-T-G hg38:Y:11690386-T-G DYZ17 A*
hg38:Y:10794234-C-A A*
hg19:Y:28811148-G-C hg38:Y:26665001-G-C A*
hg19:Y:6320301-T-C hg38:Y:6452260-T-C IR3_Dst A*A*
hg38:Y:10631255-C-G A*
hg38:Y:10631274-C-CCTCTCAAAAT A*
hg38:Y:10631281-A-C A*
hg19:Y:13687941-G-T hg38:Y:11532265-G-T DYZ17 A*
hg19:Y:13712771-A-G hg38:Y:11557095-A-G DYZ17 A*
hg19:Y:18367023-A-G hg38:Y:16255143-A-G P6_Prx A*A*
hg19:Y:19578450-A-G hg38:Y:17466570-A-G P5_Prx YA*A*
hg19:Y:20690184-T-G hg38:Y:18528298-T-G P4_Prx A*A*
hg19:Y:24283444-A-G hg38:Y:22137297-A-G P3_t1 A*A*
hg19:Y:25959232-C-T hg38:Y:23813085-C-T P1_Y1 A*A*
hg19:Y:28816780-T-C hg38:Y:26670633-T-C A*
hg19:Y:20129651-T-G hg38:Y:18017771-T-G P5_Dst A*
hg19:Y:20129655-T-A hg38:Y:18017775-T-A P5_Dst A*
hg19:Y:20129659-C-A hg38:Y:18017779-C-A P5_Dst A*
hg19:Y:5400894-G-T hg38:Y:5532853-G-T A*
hg19:Y:9550079-A-G hg38:Y:9712470-A-G IR3_Prx A*
hg19:Y:9703854-G-A hg38:Y:9866245-G-A IR3_Prx A*
hg19:Y:18442060-T-C hg38:Y:16330180-T-C P6_Dst A*
hg19:Y:20601323-T-C hg38:Y:18439437-T-C P5_Dst A*
hg19:Y:20964950-G-A hg38:Y:18803064-G-A P4_Dst A*
hg19:Y:24257064-T-C hg38:Y:22110917-T-C P3_b1 A*
hg19:Y:26409398-T-C hg38:Y:24263251-T-C P1_Y1 A*
hg19:Y:26465253-C-T hg38:Y:24319106-C-T P1_Y1 A*
hg19:Y:28817338-T-C hg38:Y:26671191-T-C A*
hg19:Y:7803654-A-T hg38:Y:7935613-A-T M10619 YY++
hg19:Y:19298344-C-T hg38:Y:17186464-C-T CTS10158 Y+
hg19:Y:8792872-TCTCC-T hg38:Y:8924831-TCTCC-T ++
hg19:Y:2800440-A-G hg38:Y:2932399-A-G BY181016 YY++
hg19:Y:2806907-C-A hg38:Y:2938866-C-A BY181018 YY+**
hg19:Y:6389882-G-A hg38:Y:6521841-G-A FT78653 *+
hg19:Y:7418834-T-C hg38:Y:7550793-T-C FT78819 YY**+
hg19:Y:7778285-T-G hg38:Y:7910244-T-G BY181182 YY++
hg19:Y:7937462-T-A hg38:Y:8069421-T-A BY181209 YY++
hg19:Y:8098560-G-T hg38:Y:8230519-G-T BY181223 YY++
hg19:Y:8148414-C-A hg38:Y:8280373-C-A BY181231 YY++
hg19:Y:8504983-T-C hg38:Y:8636942-T-C BY181295 YY++
hg19:Y:9455150-T-C hg38:Y:9617541-T-C BY181383 YY++
hg19:Y:14061905-C-T hg38:Y:11941199-C-T BY181455 YY++
hg19:Y:15693034-C-A hg38:Y:13581154-C-A BY181613 YY++
hg19:Y:15764775-T-C hg38:Y:13652895-T-C BY181620 YY++
hg19:Y:15846887-G-A hg38:Y:13735007-G-A BY181627 YY++
hg19:Y:16983198-G-T hg38:Y:14871318-G-T BY181749 YY++
hg19:Y:17434999-C-T hg38:Y:15323119-C-T YY++
hg19:Y:17590579-G-T hg38:Y:15478699-G-T BY181826 YY++
hg19:Y:17711450-G-C hg38:Y:15599570-G-C BY181840 YY++
hg19:Y:17767588-G-A hg38:Y:15655708-G-A BY181843 YY++
hg19:Y:17780258-G-A hg38:Y:15668378-G-A BY181844 YY++
hg19:Y:17883065-G-A hg38:Y:15771185-G-A BY181849 YY++
hg19:Y:18045723-C-T hg38:Y:15933843-C-T BY181873 YY++
hg19:Y:18088677-A-G hg38:Y:15976797-A-G BY181877 Y++
hg19:Y:18155517-A-G hg38:Y:16043637-A-G YY**+
hg19:Y:19090258-G-T hg38:Y:16978378-G-T BY181973 YY++
hg19:Y:22087491-T-C hg38:Y:19925605-T-C BY182147 YY++
hg19:Y:22490426-C-A hg38:Y:20328540-C-A BY53339 DYZ19 +
hg19:Y:5997346-T-C hg38:Y:6129305-T-C FT78610 +
hg19:Y:13269684-G-C hg38:Y:11114008-G-C FT442132 +
hg19:Y:13497046-C-T hg38:Y:11341370-C-T +
hg19:Y:13890006-T-C hg38:Y:11769300-T-C FT79075 Y+
hg19:Y:16723510-G-A hg38:Y:14611630-G-A FT79467 Y+
hg19:Y:17221252-G-A hg38:Y:15109372-G-A FT79527 Y+
hg19:Y:16749740-TTG-T hg38:Y:14637860-TTG-T 12×TG*
hg19:Y:24620470-G-GACA hg38:Y:22474323-G-GACA P3_t2 **
hg38:Y:56842837-C-A *
hg19:Y:22299599-A-G hg38:Y:20137713-A-G DYZ19 *
hg19:Y:20989908-CT-C hg38:Y:18828022-CT-C P4_Dst 11×T**
hg19:Y:13463087-C-A hg38:Y:11307411-C-A **
hg19:Y:20893454-CA-C hg38:Y:18731568-CA-C P4_Dst 10×A**
hg19:Y:4902210-C-A hg38:Y:5034169-C-A **
hg19:Y:16656658-C-T hg38:Y:14544778-C-T 14×T**
hg19:Y:15411308-C-CAA hg38:Y:13299428-C-CAA 30×A**
hg19:Y:58912874-A-T hg38:Y:56677997-T-A **
hg19:Y:17056906-A-G hg38:Y:14945026-A-G **
hg19:Y:23475764-A-G hg38:Y:21313878-A-G **
hg19:Y:22227931-C-A hg38:Y:20066045-C-A DYZ19 **
hg19:Y:22361123-A-T hg38:Y:20199237-A-T DYZ19 **
hg19:Y:13839850-G-C hg38:Y:11719144-G-C DYZ17 **
hg19:Y:22427549-T-C hg38:Y:20265663-T-C DYZ19 **
hg19:Y:59013975-C-CTT hg38:Y:56867828-C-CTT 11×T**
hg19:Y:16431055-C-A hg38:Y:14319175-C-A **
hg19:Y:19622095-G-T hg38:Y:17510215-G-T P5_Prx **
hg19:Y:27497074-C-CTT hg38:Y:25350927-C-CTT P1_Y2 14×T**
hg38:Y:10683222-A-C **
hg38:Y:9056674-G-A **
hg19:Y:3252907-C-A hg38:Y:3384866-C-A **
hg19:Y:5426379-TTTC-T hg38:Y:5558338-TTTC-T **
hg38:Y:10809005-C-T **
hg19:Y:23886958-A-AT hg38:Y:21725072-A-AT 10×T**
hg38:Y:11028255-C-T **
hg19:Y:16221525-C-A hg38:Y:14109645-C-A **
hg38:Y:10809081-G-T **
hg19:Y:22962187-ATTT-A hg38:Y:20800301-ATTT-A 14×T**
hg19:Y:27456889-T-TA hg38:Y:25310742-T-TA P1_Y2 **
hg19:Y:22996012-C-CAA hg38:Y:20834126-C-CAA 18×A**
hg19:Y:26124460-G-C hg38:Y:23978313-G-C P1_Y1 **
hg19:Y:17056895-A-G hg38:Y:14945015-A-G **
hg38:Y:10663108-C-G **
hg38:Y:10663120-A-G **
hg38:Y:10663123-G-C **
hg38:Y:10663128-C-A **
hg38:Y:10663148-T-C **
hg38:Y:10663154-G-C **
hg19:Y:16607951-C-A hg38:Y:14496071-C-A **
hg38:Y:10989090-T-A **
hg19:Y:6693506-C-A hg38:Y:6825465-C-A **
hg19:Y:20850618-GT-G hg38:Y:18688732-GT-G P4_Dst **
hg19:Y:6330229-CA-C hg38:Y:6462188-CA-C IR3_Dst **
hg38:Y:10889503-A-T **
hg38:Y:10889467-A-C **
hg19:Y:13457676-C-T hg38:Y:11302000-C-T **
hg19:Y:13457678-A-C hg38:Y:11302002-A-C **
hg38:Y:10961420-C-G **
hg38:Y:10980294-A-C **
hg38:Y:10989108-ACACCACT-A **
hg38:Y:10667891-A-G **
hg38:Y:10667893-A-G **
hg19:Y:21603939-A-C hg38:Y:19442053-A-C **
hg38:Y:10895897-ACTCAG-A **
hg38:Y:10666288-T-C FT428623 **
hg38:Y:10926153-G-T **
hg38:Y:10809092-G-C **
hg38:Y:10980250-C-A **
hg38:Y:10980285-C-A **
hg38:Y:10925331-C-T **
hg38:Y:10787932-C-A **
hg38:Y:11030409-C-A **
hg38:Y:10939674-C-T **
hg19:Y:24013841-C-A hg38:Y:21867694-C-A **
hg19:Y:19537901-CAAAAA-C hg38:Y:17426021-CAAAAA-C 17×A**
hg19:Y:13941635-C-A hg38:Y:11820929-C-A **
hg19:Y:20872239-T-TC hg38:Y:18710353-T-TC P4_Dst **
hg19:Y:16309042-G-A hg38:Y:14197162-G-A **
hg19:Y:16602623-C-A hg38:Y:14490743-C-A **
hg19:Y:20975743-A-AC hg38:Y:18813857-A-AC P4_Dst **
hg19:Y:7044388-C-A hg38:Y:7176347-C-A **
hg19:Y:19745021-A-C hg38:Y:17633141-A-C P5_Prx **
hg19:Y:28613187-C-A hg38:Y:26467040-C-A **
hg19:Y:13223501-G-GGGA hg38:Y:11067825-G-GGGA **
hg19:Y:5785430-C-A hg38:Y:5917389-C-A **
hg19:Y:22204379-C-A hg38:Y:20042493-C-A **
hg19:Y:4902477-G-T hg38:Y:5034436-G-T **
hg38:Y:10630880-C-A **
hg38:Y:10980242-A-T **
hg19:Y:6267620-A-T hg38:Y:6399579-A-T IR3_Dst **
hg19:Y:13554717-C-A hg38:Y:11399041-C-A **
hg19:Y:22164545-C-A hg38:Y:20002659-C-A **
hg38:Y:10809094-G-A **
hg38:Y:9112811-GA-G **
hg19:Y:13944583-C-A hg38:Y:11823877-C-A **
hg19:Y:15012296-C-CTT hg38:Y:12900384-C-CTT 17×T**
hg38:Y:10756203-A-T **
hg19:Y:25524739-C-A hg38:Y:23378592-C-A P1_gr1 **
hg19:Y:13491605-C-A hg38:Y:11335929-C-A **
hg19:Y:5189736-C-A hg38:Y:5321695-C-A **
hg19:Y:15733777-C-A hg38:Y:13621897-C-A **
hg19:Y:23475756-T-C hg38:Y:21313870-T-C **
hg19:Y:23475776-A-C hg38:Y:21313890-A-C **
hg19:Y:13460514-C-T hg38:Y:11304838-C-T **
hg19:Y:3116358-C-A hg38:Y:3248317-C-A **
hg38:Y:10961376-C-T **
hg19:Y:4951600-C-A hg38:Y:5083559-C-A **
hg38:Y:10765769-C-A **
hg38:Y:10851153-T-C **
hg19:Y:18631062-C-A hg38:Y:16519182-C-A **
hg19:Y:5172292-C-A hg38:Y:5304251-C-A **
hg19:Y:15011616-C-A hg38:Y:12899704-C-A **
hg38:Y:10769444-G-GCATGC **
hg38:Y:10889483-T-A **
hg38:Y:10889487-C-A **
hg38:Y:10889491-T-G **
hg38:Y:10889504-T-C **
hg19:Y:19233028-T-C hg38:Y:17121148-T-C **
hg19:Y:16652152-T-C hg38:Y:14540272-T-C **
hg19:Y:7723948-C-CTTT hg38:Y:7855907-C-CTTT 25×T**
hg38:Y:10756207-C-T **
hg19:Y:15201601-C-A hg38:Y:13089687-C-A **
hg19:Y:23047508-C-A hg38:Y:20885622-C-A **
hg19:Y:14766597-C-CT hg38:Y:12654666-C-CT 8×T**
hg19:Y:23475766-G-A hg38:Y:21313880-G-A **
hg19:Y:23475775-A-G hg38:Y:21313889-A-G **
hg19:Y:23475780-A-G hg38:Y:21313894-A-G **
hg19:Y:23475786-C-G hg38:Y:21313900-C-G **
hg19:Y:21996184-G-T hg38:Y:19834298-G-T **
hg19:Y:23256001-C-A hg38:Y:21094115-C-A **
hg19:Y:20473622-A-T hg38:Y:18311736-A-T P5_Dst 9×GAT**
hg19:Y:16354637-C-A hg38:Y:14242757-C-A **
hg19:Y:15688968-C-A hg38:Y:13577088-C-A FT180436 **
hg19:Y:13457691-C-T hg38:Y:11302015-C-T **
hg19:Y:6267582-A-T hg38:Y:6399541-A-T IR3_Dst **
hg38:Y:10683221-C-T **
hg19:Y:9079456-G-T hg38:Y:9241847-G-T **
hg19:Y:17380638-C-A hg38:Y:15268758-C-A **
hg19:Y:24205612-C-A hg38:Y:22059465-C-A P3_b1 **
hg38:Y:10809149-A-G **
hg38:Y:10981906-G-T **
hg19:Y:3501238-C-A hg38:Y:3633197-C-A **
hg19:Y:14055039-C-A hg38:Y:11934333-C-A **
hg19:Y:16629372-C-A hg38:Y:14517492-C-A **
hg38:Y:10939665-T-G **
hg19:Y:8970837-T-A hg38:Y:9133228-T-A **
hg38:Y:10809097-T-C **
hg38:Y:10809109-G-T **
hg38:Y:10809122-C-T **
hg38:Y:10809127-C-T **
hg38:Y:10809132-C-T **
hg19:Y:6403623-G-A hg38:Y:6535582-G-A FTB20236 **
hg19:Y:5447132-C-A hg38:Y:5579091-C-A **
hg19:Y:7984380-C-A hg38:Y:8116339-C-A **
hg19:Y:8075785-C-A hg38:Y:8207744-C-A **
hg38:Y:10672226-T-C **
hg19:Y:18381295-A-C hg38:Y:16269415-A-C P6_Prx **
hg19:Y:21639064-C-A hg38:Y:19477178-C-A **
hg19:Y:16342181-C-A hg38:Y:14230301-C-A **
hg38:Y:10809079-A-T **
hg38:Y:10833649-C-A **
hg19:Y:21030989-GT-G hg38:Y:18869103-GT-G P4_Dst **
hg19:Y:13463091-G-A hg38:Y:11307415-G-A **
hg19:Y:19393037-C-A hg38:Y:17281157-C-A **
hg38:Y:10959123-C-A **
hg19:Y:23475802-G-A hg38:Y:21313916-G-A **
hg19:Y:23475807-T-C hg38:Y:21313921-T-C **
hg19:Y:17561453-C-A hg38:Y:15449573-C-A **
hg19:Y:13880175-C-A hg38:Y:11759469-C-A **
hg38:Y:11676582-C-A DYZ17 **
hg19:Y:7099323-C-T hg38:Y:7231282-C-T **
hg38:Y:10889462-C-T **
hg38:Y:10889481-G-C **
hg38:Y:10889499-T-G **
hg19:Y:22991213-C-A hg38:Y:20829327-C-A **
hg19:Y:13728473-T-A hg38:Y:11572797-T-A DYZ17 **
hg19:Y:14605196-C-A hg38:Y:12493398-C-A **
hg19:Y:8353117-G-A hg38:Y:8485076-G-A **
hg19:Y:14789438-C-G hg38:Y:12677509-C-G **
hg38:Y:10864667-T-C **
hg19:Y:19558393-C-A hg38:Y:17446513-C-A **
hg38:Y:10998691-C-A **
hg19:Y:21410230-C-A hg38:Y:19248344-C-A **
hg38:Y:10959105-G-C **
hg38:Y:10785042-C-T **
hg19:Y:16171090-C-A hg38:Y:14059210-C-A **
hg19:Y:27596040-T-G hg38:Y:25449893-T-G P1_Y2 **
hg38:Y:10959106-T-C **
hg38:Y:10959116-A-C **
hg38:Y:10997537-C-A **
hg19:Y:15127808-C-A hg38:Y:13015895-C-A **
hg19:Y:17103324-G-T hg38:Y:14991444-G-T **
hg19:Y:16988807-C-A hg38:Y:14876927-C-A **
hg19:Y:20448941-C-CACAT hg38:Y:18287055-C-CACAT P5_Dst **
hg19:Y:20473593-A-G hg38:Y:18311707-A-G P5_Dst **
hg38:Y:10824306-C-A **
hg19:Y:26015325-C-CATAT hg38:Y:23869178-C-CATAT P1_Y1 **
hg19:Y:18374210-CT-C hg38:Y:16262330-CT-C P6_Prx **
hg19:Y:3042771-T-G hg38:Y:3174730-T-G **
hg19:Y:3228851-C-A hg38:Y:3360810-C-A **
hg19:Y:3413712-C-A hg38:Y:3545671-C-A **
hg19:Y:3505867-C-T hg38:Y:3637826-C-T **
hg19:Y:3648565-C-A hg38:Y:3780524-C-A **
hg19:Y:3660541-G-T hg38:Y:3792500-G-T **
hg19:Y:3698873-G-T hg38:Y:3830832-G-T **
hg19:Y:3918437-C-A hg38:Y:4050396-C-A **
hg19:Y:3949097-C-T hg38:Y:4081056-C-T **
hg19:Y:4003705-C-A hg38:Y:4135664-C-A **
hg19:Y:4077634-C-T hg38:Y:4209593-C-T **
hg19:Y:4100311-G-T hg38:Y:4232270-G-T **
hg19:Y:4442952-C-A hg38:Y:4574911-C-A **
hg19:Y:4671798-T-A hg38:Y:4803757-T-A **
hg19:Y:4985744-C-A hg38:Y:5117703-C-A **
hg19:Y:4996006-T-A hg38:Y:5127965-T-A **
hg19:Y:5442130-G-T hg38:Y:5574089-G-T **
hg19:Y:5538464-C-A hg38:Y:5670423-C-A **
hg19:Y:5682103-G-A hg38:Y:5814062-G-A **
hg19:Y:5859094-T-C hg38:Y:5991053-T-C **
hg19:Y:5900342-C-A hg38:Y:6032301-C-A **
hg19:Y:6010464-C-A hg38:Y:6142423-C-A **
hg19:Y:6019736-G-T hg38:Y:6151695-G-T **
hg19:Y:6070701-G-T hg38:Y:6202660-G-T **
hg19:Y:6352873-T-A hg38:Y:6484832-T-A **
hg19:Y:6478589-G-A hg38:Y:6610548-G-A **
hg19:Y:7021741-C-A hg38:Y:7153700-C-A **
hg19:Y:7029630-A-G hg38:Y:7161589-A-G **
hg19:Y:7099335-A-AC hg38:Y:7231294-A-AC **
hg19:Y:7110653-T-G hg38:Y:7242612-T-G **
hg19:Y:7138956-T-G hg38:Y:7270915-T-G **
hg19:Y:7314419-A-C hg38:Y:7446378-A-C **
hg19:Y:7323004-C-A hg38:Y:7454963-C-A **
hg19:Y:7418469-A-T hg38:Y:7550428-A-T **
hg19:Y:8002346-AT-A hg38:Y:8134305-AT-A **
hg19:Y:8003172-G-T hg38:Y:8135131-G-T **
hg19:Y:8712139-C-A hg38:Y:8844098-C-A **
hg19:Y:8786645-A-G hg38:Y:8918604-A-G **
hg19:Y:9456147-C-A hg38:Y:9618538-C-A **
hg19:Y:9618139-C-A hg38:Y:9780530-C-A IR3_Prx **
hg19:Y:9629368-T-C hg38:Y:9791759-T-C IR3_Prx **
hg19:Y:10011021-G-T hg38:Y:10173412-G-T **
hg19:Y:10035998-C-A hg38:Y:10198389-C-A **
hg38:Y:10666278-C-T **
hg38:Y:10690667-A-G **
hg38:Y:10756021-C-A **
hg38:Y:10790035-T-C **
hg38:Y:10793716-C-A **
hg38:Y:10793745-C-A **
hg38:Y:10808268-T-C **
hg38:Y:10809095-T-C **
hg38:Y:10809099-T-G **
hg38:Y:10809152-C-A **
hg38:Y:10822141-C-A **
hg38:Y:10837264-C-A **
hg38:Y:10843135-C-A **
hg38:Y:10875196-A-C **
hg38:Y:10875244-C-A **
hg38:Y:10882350-C-A **
hg38:Y:10890326-C-A **
hg38:Y:10896348-C-A **
hg38:Y:10926138-T-TTCCAC **
hg38:Y:10926356-C-A **
hg38:Y:10959158-T-C **
hg38:Y:10964557-C-A **
hg38:Y:11018405-C-A **
hg38:Y:11020257-C-A **
hg38:Y:11034897-G-T **
hg19:Y:13318964-A-C hg38:Y:11163288-A-C **
hg19:Y:13422188-G-T hg38:Y:11266512-G-T **
hg19:Y:13728485-G-T hg38:Y:11572809-G-T DYZ17 **
hg38:Y:11651408-A-G DYZ17 **
hg38:Y:11662435-C-T DYZ17 **
hg38:Y:11662439-T-C DYZ17 **
hg38:Y:11662443-A-G DYZ17 **
hg38:Y:11662452-T-A DYZ17 **
hg38:Y:11664404-C-A DYZ17 **
hg19:Y:13859184-G-T hg38:Y:11738478-G-T DYZ17 **
hg19:Y:13941025-G-A hg38:Y:11820319-G-A **
hg19:Y:13974075-G-T hg38:Y:11853369-G-T **
hg19:Y:14296444-C-A hg38:Y:12175738-C-A **
hg19:Y:14539327-C-A hg38:Y:12427528-C-A **
hg19:Y:14591790-C-A hg38:Y:12479990-C-A **
hg19:Y:14593689-C-A hg38:Y:12481889-C-A **
hg19:Y:14596122-C-A hg38:Y:12484322-C-A **
hg19:Y:14747454-G-A hg38:Y:12635523-G-A **
hg19:Y:14926397-A-G hg38:Y:12814462-A-G **
hg19:Y:15061712-A-G hg38:Y:12949804-A-G **
hg19:Y:15369162-T-C hg38:Y:13257282-T-C **
hg19:Y:16028685-C-A hg38:Y:13916805-C-A **
hg19:Y:16274161-G-A hg38:Y:14162281-G-A **
hg19:Y:16323763-G-T hg38:Y:14211883-G-T **
hg19:Y:16354608-C-A hg38:Y:14242728-C-A **
hg19:Y:16412332-C-T hg38:Y:14300452-C-T **
hg19:Y:16616726-C-A hg38:Y:14504846-C-A **
hg19:Y:16624905-C-A hg38:Y:14513025-C-A **
hg19:Y:17159674-G-T hg38:Y:15047794-G-T **
hg19:Y:17363100-C-A hg38:Y:15251220-C-A **
hg19:Y:17485221-C-A hg38:Y:15373341-C-A **
hg19:Y:17737578-A-G hg38:Y:15625698-A-G **
hg19:Y:18185979-A-G hg38:Y:16074099-A-G **
hg19:Y:18189442-C-A hg38:Y:16077562-C-A **
hg19:Y:19507222-C-A hg38:Y:17395342-C-A **
hg19:Y:19740661-A-G hg38:Y:17628781-A-G P5_Prx **
hg19:Y:19895439-C-A hg38:Y:17783559-C-A P5_Prx **
hg19:Y:20028145-T-G hg38:Y:17916265-T-G P5_Prx **
hg19:Y:20028156-T-G hg38:Y:17916276-T-G P5_Prx **
hg19:Y:20028184-T-G hg38:Y:17916304-T-G P5_Prx **
hg19:Y:20028188-T-G hg38:Y:17916308-T-G P5_Prx **
hg19:Y:20028191-C-G hg38:Y:17916311-C-G P5_Prx **
hg19:Y:20028194-T-G hg38:Y:17916314-T-G P5_Prx **
hg19:Y:20028206-T-G hg38:Y:17916326-T-G P5_Prx **
hg19:Y:20273574-TGAAAAAG-T hg38:Y:18111688-TGAAAAAG-T P5_Dst **
hg19:Y:20802670-T-C hg38:Y:18640784-T-C P4_Gap **
hg19:Y:20809848-A-C hg38:Y:18647962-A-C P4_Gap **
hg19:Y:21097203-C-A hg38:Y:18935317-C-A **
hg19:Y:21514103-C-A hg38:Y:19352217-C-A **
hg19:Y:21565972-C-A hg38:Y:19404086-C-A **
hg19:Y:22076224-A-G hg38:Y:19914338-A-G **
hg19:Y:22168726-G-T hg38:Y:20006840-G-T **
hg19:Y:22584314-T-G hg38:Y:20422428-T-G **
hg19:Y:22617226-C-A hg38:Y:20455340-C-A FTB83914 **
hg19:Y:23225484-G-A hg38:Y:21063598-G-A **
hg19:Y:23311117-C-A hg38:Y:21149231-C-A **
hg19:Y:23881896-A-G hg38:Y:21720010-A-G **
hg19:Y:24303367-C-A hg38:Y:22157220-C-A P3_t1 **
hg19:Y:24450659-C-A hg38:Y:22304512-C-A **
hg19:Y:24595272-T-C hg38:Y:22449125-T-C P3_t2 ****
hg19:Y:25860997-ATT-A hg38:Y:23714850-ATT-A P1_Y1 **
hg19:Y:25872442-T-G hg38:Y:23726295-T-G P1_Y1 **
hg19:Y:25872450-A-G hg38:Y:23726303-A-G P1_Y1 **
hg19:Y:25872492-A-G hg38:Y:23726345-A-G P1_Y1 **
hg19:Y:25872497-A-G hg38:Y:23726350-A-G P1_Y1 **
hg19:Y:25934542-T-TG hg38:Y:23788395-T-TG P1_Y1 **
hg19:Y:26152065-TTCTTTCTTTCTC-T hg38:Y:24005918-TTCTTTCTTTCTC-T P1_Y1 **
hg19:Y:27232102-G-A hg38:Y:25085955-G-A P1_g3 **
hg19:Y:27947850-GAAACAAATT-G hg38:Y:25801703-GAAACAAATT-G P1_Y2 **
hg19:Y:28604550-C-A hg38:Y:26458403-C-A **
hg19:Y:28765003-A-C hg38:Y:26618856-A-C **
hg38:Y:56727794-G-C **
hg19:Y:20473642-A-G hg38:Y:18311756-A-G P5_Dst **
hg19:Y:28420682-A-AGT hg38:Y:26274535-A-AGT P1_gr2 **
hg19:Y:27901267-A-AT hg38:Y:25755120-A-AT P1_Y2 **
hg19:Y:6213675-C-G hg38:Y:6345634-C-G IR3_Dst **
hg19:Y:7217765-G-GT hg38:Y:7349724-G-GT **
hg19:Y:7373476-C-T hg38:Y:7505435-C-T **
hg19:Y:9657404-CAA-C hg38:Y:9819795-CAA-C IR3_Prx 12×A**
hg19:Y:9657531-CT-C hg38:Y:9819922-CT-C IR3_Prx 9×T**
hg38:Y:10785041-A-C **
hg19:Y:16101323-A-C hg38:Y:13989443-A-C P8_Prx **
hg19:Y:19765098-T-C hg38:Y:17653218-T-C P5_Prx **
hg19:Y:20473619-G-GCT hg38:Y:18311733-G-GCT P5_Dst **
hg19:Y:20473624-A-ATAG hg38:Y:18311738-A-ATAG P5_Dst **
hg19:Y:20473630-A-G hg38:Y:18311744-A-G P5_Dst **
hg19:Y:20473635-G-A hg38:Y:18311749-G-A P5_Dst **
hg19:Y:23391647-A-G hg38:Y:21229761-A-G **
hg19:Y:24611445-T-G hg38:Y:22465298-T-G P3_t2 **
hg19:Y:26398379-T-TC hg38:Y:24252232-T-TC P1_Y1 **
hg19:Y:28057423-T-C hg38:Y:25911276-T-C P1_Y2 **
hg19:Y:5163631-T-C hg38:Y:5295590-T-C ***
hg19:Y:13258558-C-CTT hg38:Y:11102882-C-CTT 20×T***
hg19:Y:13475803-T-G hg38:Y:11320127-T-G ***
hg19:Y:5403266-CTT-C hg38:Y:5535225-CTT-C 15×T***
hg38:Y:11026055-C-T ***
hg19:Y:58883633-G-A hg38:Y:56707238-C-T ***
hg38:Y:10772454-T-A ***
hg19:Y:21562947-GTTT-G hg38:Y:19401061-GTTT-G 16×T***
hg38:Y:10893947-ATTCTC-A,ATTCCATTCTC ***
hg38:Y:10750778-T-C FT91615 ***
hg38:Y:10663158-G-C ***
hg38:Y:10663166-C-A ***
hg38:Y:11004441-A-G ***
hg38:Y:10861258-C-A ***
hg19:Y:18997574-C-A hg38:Y:16885694-C-A ***
hg19:Y:9034655-C-CAA hg38:Y:9197046-C-CAA 12×A***
hg38:Y:10667018-C-G ***
hg19:Y:14940073-CA-C,CAA hg38:Y:12828147-CA-C,CAA 15×A***
hg19:Y:21084353-G-A hg38:Y:18922467-G-A F23866 ***
hg38:Y:56830301-TCCATTCCATG-T ***
hg19:Y:22849512-G-T hg38:Y:20687626-G-T ***
hg38:Y:10693929-CATTCA-C,CATTCC ***
hg19:Y:15180666-C-A hg38:Y:13068752-C-A ***
hg38:Y:10781325-G-T ***
hg19:Y:13839793-A-G hg38:Y:11719087-A-G DYZ17 ***
hg19:Y:22768348-TAAA-T hg38:Y:20606462-TAAA-T 17×A***
hg19:Y:14310448-G-T hg38:Y:12189742-G-T ***
hg19:Y:28736219-C-A hg38:Y:26590072-C-A ***
hg19:Y:13459474-C-A hg38:Y:11303798-C-A ***
hg38:Y:10869896-G-T ***
hg38:Y:11676876-C-A DYZ17 ***
hg38:Y:11666040-C-A DYZ17 ***
hg38:Y:10866632-C-A ***
hg19:Y:58855985-T-A hg38:Y:56734886-A-T ***
hg38:Y:56850092-C-A ***
hg19:Y:20063941-TAAAA-T hg38:Y:17952061-TAAAA-T P5_Gap 18×A***
hg38:Y:10780992-G-T ***
hg38:Y:10841983-C-T FT91843 ***
hg19:Y:7131830-C-A hg38:Y:7263789-C-A ***
hg38:Y:10858937-C-A ***
hg19:Y:15477291-CAAA-C,CAA hg38:Y:13365411-CAAA-C,CAA 18×A***
hg19:Y:18425123-C-A hg38:Y:16313243-C-A P6_Gap ***
hg38:Y:56839216-C-T ***
hg38:Y:11004431-A-G ***
hg38:Y:10656309-C-CGG,CGGCTC ***
hg19:Y:13457964-TC-T hg38:Y:11302288-TC-T ***
hg38:Y:10799508-AC-A,GC ***
hg38:Y:10927765-G-T ***
hg38:Y:10938424-C-A ***
hg19:Y:14385243-G-T hg38:Y:12264539-G-T ***
hg38:Y:10982465-C-A ***
hg38:Y:10856717-C-A ***
hg19:Y:13449042-GCA-G hg38:Y:11293366-GCA-G ***
hg19:Y:8321435-C-CTTT hg38:Y:8453394-C-CTTT 15×T***
hg19:Y:3815196-G-T hg38:Y:3947155-G-T ***
hg19:Y:7199581-C-T hg38:Y:7331540-C-T ***
hg19:Y:9936187-C-A hg38:Y:10098578-C-A ***
hg38:Y:10869207-C-A ***
hg38:Y:10888034-TTCCAT-T,TTCCAG ***
hg38:Y:10927238-C-A,T ***
hg38:Y:10992840-T-C ***
hg38:Y:11014888-C-A ***
hg19:Y:13475804-A-T hg38:Y:11320128-A-T ***
hg19:Y:13671350-G-A hg38:Y:11515674-G-A DYZ17 ***
hg19:Y:13735401-G-C hg38:Y:11579725-G-C DYZ17 ***
hg38:Y:11656389-G-T DYZ17 ***
hg19:Y:14925764-C-A hg38:Y:12813829-C-A ***
hg19:Y:15057738-AT-A,ATTT hg38:Y:12945830-AT-A,ATTT 18×T***
hg19:Y:15740563-C-A hg38:Y:13628683-C-A ***
hg19:Y:16592532-C-A hg38:Y:14480652-C-A ***
hg19:Y:16703315-G-T hg38:Y:14591435-G-T ***
hg19:Y:17285034-C-A hg38:Y:15173154-C-A ***
hg19:Y:19218409-A-G hg38:Y:17106529-A-G ***
hg19:Y:22542483-C-A hg38:Y:20380597-C-A ***
hg19:Y:23294364-A-G hg38:Y:21132478-A-G ***
hg19:Y:23294374-T-C hg38:Y:21132488-T-C ***
hg19:Y:23352228-T-A hg38:Y:21190342-T-A ***
hg19:Y:5388261-TAA-T,TA hg38:Y:5520220-TAA-T,TA 18×A***
hg19:Y:22537275-CAA-C,CA hg38:Y:20375389-CAA-C,CA 15×A***
hg19:Y:7510235-T-G hg38:Y:7642194-T-G ***
hg19:Y:7989472-T-G hg38:Y:8121431-T-G ***
hg38:Y:11014343-A-C ***
hg19:Y:23952613-A-G hg38:Y:21806466-A-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: IN33860956969877695137687793
Kit: IN338601419428789655748038906
Used in age calculations1419428789655748038906
Counts of SNPs3226
Variant counts last updated 2025-01-26 03:42:18.



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