Pieters
BigY2: MI20207MDKA Birth:
NetherlandsTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 MI20207 |
|---|---|---|---|---|---|---|---|
| hg19:Y:23887937-A-G hg38:Y:21726051-A-G | Y | A+ | |||||
| hg19:Y:19708019-G-A hg38:Y:17596139-G-A | P5_Prx | A* | |||||
| hg19:Y:22217493-G-C hg38:Y:20055607-G-C | DYZ19 | A* | |||||
| hg19:Y:22217494-T-C hg38:Y:20055608-T-C | DYZ19 | A* | |||||
| hg19:Y:22217495-T-C hg38:Y:20055609-T-C | DYZ19 | A* | |||||
| hg19:Y:25982817-T-A hg38:Y:23836670-T-A | P1_Y1 | A* | |||||
| hg19:Y:2875352-C-G hg38:Y:3007311-C-G | BY169043 | Y | Y | + | |||
| hg19:Y:2914547-C-T hg38:Y:3046506-C-T | BY169052 | Y | + | ||||
| hg19:Y:6120388-CGT-C hg38:Y:6252347-CGT-C | + | ||||||
| hg19:Y:6958715-C-A hg38:Y:7090674-C-A | BY178018 | Y | Y | + | |||
| hg19:Y:7728442-G-A hg38:Y:7860401-G-A | BY178144 | Y | Y | + | |||
| hg19:Y:8272124-T-A hg38:Y:8404083-T-A | BY169461 | Y | Y | + | |||
| hg19:Y:8404312-A-G hg38:Y:8536271-A-G | Y | Y | + | ||||
| hg19:Y:8486205-T-G hg38:Y:8618164-T-G | Y | Y | + | ||||
| hg19:Y:8498624-C-T hg38:Y:8630583-C-T | Y | Y | + | ||||
| hg19:Y:9170887-GA-G hg38:Y:9333278-GA-G | + | ||||||
| hg19:Y:9395273-C-G hg38:Y:9557664-C-G | BY169711 | Y | Y | + | |||
| hg19:Y:13219523-G-C hg38:Y:11063847-G-C | BY177787 | + | |||||
| hg19:Y:13231997-A-G hg38:Y:11076321-A-G | + | ||||||
| hg19:Y:14448937-A-G hg38:Y:12328210-A-G | Y | Y | + | ||||
| hg19:Y:14555418-T-C hg38:Y:12443619-T-C | BY169955 | Y | Y | + | |||
| hg19:Y:15509515-C-T hg38:Y:13397635-C-T | Y | Y | + | ||||
| hg19:Y:15766149-T-G hg38:Y:13654269-T-G | BY178876 | Y | Y | + | |||
| hg19:Y:17477227-C-T hg38:Y:15365347-C-T | BY179192 | Y | Y | + | |||
| hg19:Y:17579208-T-A hg38:Y:15467328-T-A | BY170578 | Y | Y | + | |||
| hg19:Y:18219562-C-G hg38:Y:16107682-C-G | BY170753 | Y | + | ||||
| hg19:Y:18728068-C-T hg38:Y:16616188-C-T | BY170831 | Y | Y | + | |||
| hg19:Y:19508633-A-G hg38:Y:17396753-A-G | Y | Y | + | ||||
| hg19:Y:21371907-C-T hg38:Y:19210021-C-T | Y | Y | + | ||||
| hg19:Y:21859982-A-C hg38:Y:19698096-A-C | Y | Y | + | ||||
| hg19:Y:21870866-T-C hg38:Y:19708980-T-C | BY179764 | Y | Y | + | |||
| hg19:Y:22356534-C-T hg38:Y:20194648-C-T | BY177817 | DYZ19 | + | ||||
| hg19:Y:22681297-A-G hg38:Y:20519411-A-G | Y | Y | + | ||||
| hg19:Y:23815631-C-G hg38:Y:21653745-C-G | BY171595 | Y | + | ||||
| hg19:Y:23839725-T-C hg38:Y:21677839-T-C | Y | + | |||||
| hg19:Y:23960861-A-T hg38:Y:21814714-A-T | BY180120 | Y | + | ||||
| hg19:Y:24484073-G-T hg38:Y:22337926-G-T | BY171654 | + | |||||
| hg19:Y:28745765-A-G hg38:Y:26599618-A-G | BY171681 | Y | + | ||||
| hg38:Y2:14533-G-C | + | ||||||
| hg19:Y:22345686-A-T hg38:Y:20183800-A-T | BY217596 | DYZ19 | * | ||||
| hg19:Y:22345657-C-T hg38:Y:20183771-C-T | DYZ19 | * | |||||
| hg19:Y:22345687-C-A,G hg38:Y:20183801-C-A,G | DYZ19 | * | |||||
| hg19:Y:22345675-C-A hg38:Y:20183789-C-A | DYZ19 | * | |||||
| hg19:Y:22345680-G-A hg38:Y:20183794-G-A | DYZ19 | * | |||||
| hg19:Y:28810557-G-C hg38:Y:26664410-G-C | * | ||||||
| hg19:Y:19351505-G-A hg38:Y:17239625-G-A | ** | ||||||
| hg19:Y:15074574-C-A hg38:Y:12962664-C-A | FTB6953 | ** | |||||
| hg19:Y:22356884-T-G hg38:Y:20194998-T-G | DYZ19 | ** | |||||
| hg19:Y:58977576-C-A hg38:Y:56831429-C-A | ** | ||||||
| hg19:Y:7239329-C-A hg38:Y:7371288-C-A | A7087 | ** | |||||
| hg19:Y:22356870-A-T hg38:Y:20194984-A-T | DYZ19 | ** | |||||
| hg19:Y:22427537-C-A hg38:Y:20265651-C-A | DYZ19 | ** | |||||
| hg19:Y:13488253-C-T hg38:Y:11332577-C-T | ** | ||||||
| hg38:Y:10987755-A-G | ** | ||||||
| hg38:Y:11643736-A-T | DYZ17 | ** | |||||
| hg19:Y:8988009-G-T hg38:Y:9150400-G-T | ** | ||||||
| hg38:Y:10657393-T-C | ** | ||||||
| hg38:Y:10826498-C-A | ** | ||||||
| hg38:Y:11643746-A-T | DYZ17 | ** | |||||
| hg19:Y:14696878-C-A hg38:Y:12584944-C-A | ** | ||||||
| hg19:Y:6793619-C-A hg38:Y:6925578-C-A | ** | ||||||
| hg19:Y:22788550-C-A hg38:Y:20626664-C-A | FT97203 | ** | |||||
| hg19:Y:14531234-C-A hg38:Y:12419435-C-A | ** | ||||||
| hg38:Y:56837404-G-A | ** | ||||||
| hg19:Y:20696832-A-T hg38:Y:18534946-A-T | P4_Prx | ** | |||||
| hg38:Y:11030095-AGTCAA-G | ** | ||||||
| hg19:Y:13705485-G-T hg38:Y:11549809-G-T | DYZ17 | ** | |||||
| hg19:Y:19600400-GT-G hg38:Y:17488520-GT-G | P5_Prx | ** | |||||
| hg19:Y:2746000-A-G hg38:Y:2877959-A-G | ** | ||||||
| hg19:Y:14427484-C-A hg38:Y:12306759-C-A | ** | ||||||
| hg38:Y:10940331-C-A | ** | ||||||
| hg38:Y:56823117-G-T | ** | ||||||
| hg19:Y:14570095-C-A hg38:Y:12458295-C-A | ** | ||||||
| hg38:Y:11643749-G-A | DYZ17 | ** | |||||
| hg38:Y:10955447-A-T | ** | ||||||
| hg19:Y:20696790-C-A hg38:Y:18534904-C-A | P4_Prx | ** | |||||
| hg38:Y:10776583-C-G | ** | ||||||
| hg38:Y:56830832-GTCCACTCCAT-G | ** | ||||||
| hg19:Y:6252047-C-A hg38:Y:6384006-C-A | IR3_Dst | ** | |||||
| hg19:Y:17864954-C-A hg38:Y:15753074-C-A | ** | ||||||
| hg38:Y:10800957-C-A | ** | ||||||
| hg19:Y:6475508-C-A hg38:Y:6607467-C-A | ** | ||||||
| hg38:Y:10864628-C-A | FT434599 | ** | |||||
| hg19:Y:15370813-C-A hg38:Y:13258933-C-A | ** | ||||||
| hg19:Y:9535174-G-GT hg38:Y:9697565-G-GT | IR3_Prx | ** | |||||
| hg38:Y:10941502-C-A | ** | ||||||
| hg19:Y:22314775-T-G hg38:Y:20152889-T-G | DYZ19 | ** | |||||
| hg38:Y:10682515-T-C | ** | ||||||
| hg19:Y:13217844-C-A hg38:Y:11062168-C-A | ** | ||||||
| hg19:Y:18368676-T-A hg38:Y:16256796-T-A | P6_Prx | ** | |||||
| hg38:Y:10781101-C-A | ** | ||||||
| hg19:Y:18059805-C-A hg38:Y:15947925-C-A | ** | ||||||
| hg38:Y:10800962-A-T | ** | ||||||
| hg19:Y:9773729-C-A hg38:Y:9936120-C-A | ** | ||||||
| hg19:Y:13941102-C-A hg38:Y:11820396-C-A | ** | ||||||
| hg19:Y:16887129-C-A hg38:Y:14775249-C-A | ** | ||||||
| hg19:Y:22732775-C-A hg38:Y:20570889-C-A | ** | ||||||
| hg19:Y:13471991-T-G hg38:Y:11316315-T-G | ** | ||||||
| hg38:Y:56834623-C-T | ** | ||||||
| hg19:Y:24283297-A-C hg38:Y:22137150-A-C | P3_t1 | ** | |||||
| hg38:Y:10832467-T-A | ** | ||||||
| hg38:Y:10832473-T-C | ** | ||||||
| hg19:Y:20438757-A-C hg38:Y:18276871-A-C | P5_Dst | ** | |||||
| hg19:Y:17243721-C-A hg38:Y:15131841-C-A | ** | ||||||
| hg19:Y:14297972-A-T hg38:Y:12177266-A-T | ** | ||||||
| hg19:Y:17646777-C-A hg38:Y:15534897-C-A | ** | ||||||
| hg19:Y:6384576-G-T hg38:Y:6516535-G-T | ** | ||||||
| hg19:Y:5870106-C-A hg38:Y:6002065-C-A | ** | ||||||
| hg19:Y:4138474-G-T hg38:Y:4270433-G-T | ** | ||||||
| hg38:Y:10899946-C-G | ** | ||||||
| hg38:Y:10899955-C-T | ** | ||||||
| hg38:Y:10899961-C-G | ** | ||||||
| hg38:Y:10645865-C-A | ** | ||||||
| hg38:Y:10955428-C-T | ** | ||||||
| hg19:Y:14871353-C-A hg38:Y:12759423-C-A | ** | ||||||
| hg19:Y:14766704-C-A hg38:Y:12654773-C-A | ** | ||||||
| hg19:Y:20434819-G-T hg38:Y:18272933-G-T | P5_Dst | ** | |||||
| hg19:Y:14009372-T-G hg38:Y:11888666-T-G | ** | ||||||
| hg19:Y:13488574-C-A hg38:Y:11332898-C-A | ** | ||||||
| hg38:Y:10976977-T-G | ** | ||||||
| hg38:Y:10781103-G-A | ** | ||||||
| hg38:Y:10766645-C-T | ** | ||||||
| hg19:Y:19055530-G-T hg38:Y:16943650-G-T | ** | ||||||
| hg38:Y:10868310-T-A | FT434787 | ** | |||||
| hg19:Y:7242492-C-T hg38:Y:7374451-C-T | Y34392 | ** | |||||
| hg38:Y:11676872-C-A | DYZ17 | ** | |||||
| hg19:Y:6799068-C-A hg38:Y:6931027-C-A | ** | ||||||
| hg38:Y:10947742-C-A | ** | ||||||
| hg38:Y:11643766-A-ATCAAG | DYZ17 | ** | |||||
| hg38:Y:11643790-A-C | DYZ17 | ** | |||||
| hg19:Y:5557362-C-A hg38:Y:5689321-C-A | ** | ||||||
| hg19:Y:13705480-G-A hg38:Y:11549804-G-A | DYZ17 | ** | |||||
| hg38:Y:11026087-C-T | ** | ||||||
| hg19:Y:17277064-C-A hg38:Y:15165184-C-A | ** | ||||||
| hg38:Y:56834605-C-A | ** | ||||||
| hg38:Y:10656128-C-T | ** | ||||||
| hg38:Y:10938379-T-C | ** | ||||||
| hg38:Y:10781072-C-T | ** | ||||||
| hg38:Y:10999884-C-T | ** | ||||||
| hg19:Y:13865670-C-A hg38:Y:11744964-C-A | DYZ17 | ** | |||||
| hg19:Y:15370862-G-T hg38:Y:13258982-G-T | ** | ||||||
| hg38:Y:10783849-C-A | ** | ||||||
| hg19:Y:13290244-C-A hg38:Y:11134568-C-A | ** | ||||||
| hg19:Y:6776163-A-G hg38:Y:6908122-A-G | ** | ||||||
| hg19:Y:18577950-T-G hg38:Y:16466070-T-G | ** | ||||||
| hg38:Y:11026047-C-G | ** | ||||||
| hg38:Y:10900554-C-T | ** | ||||||
| hg38:Y:10900600-G-A | ** | ||||||
| hg19:Y:17884732-C-A hg38:Y:15772852-C-A | ** | ||||||
| hg38:Y:10993365-G-T | ** | ||||||
| hg19:Y:14027162-C-A hg38:Y:11906456-C-A | ** | ||||||
| hg38:Y:10868318-C-G | ** | ||||||
| hg38:Y:10868324-C-A | ** | ||||||
| hg38:Y:10813048-C-A | ** | ||||||
| hg38:Y2:30637-G-T | ** | ||||||
| hg19:Y:15744693-C-A hg38:Y:13632813-C-A | ** | ||||||
| hg38:Y:10785786-C-A | FT431120 | ** | |||||
| hg19:Y:17115073-C-A hg38:Y:15003193-C-A | ** | ||||||
| hg38:Y:10776088-T-A | ** | ||||||
| hg19:Y:9936292-T-C hg38:Y:10098683-T-C | ** | ||||||
| hg19:Y:13811084-G-GAATCC hg38:Y:11690378-G-GAATCC | DYZ17 | ** | |||||
| hg19:Y:13811091-A-ATCTAC hg38:Y:11690385-A-ATCTAC | DYZ17 | ** | |||||
| hg19:Y:13811099-G-T hg38:Y:11690393-G-T | DYZ17 | ** | |||||
| hg19:Y:7030686-C-A hg38:Y:7162645-C-A | ** | ||||||
| hg19:Y:5212074-C-A hg38:Y:5344033-C-A | ** | ||||||
| hg38:Y:10766638-T-A | ** | ||||||
| hg19:Y:16180446-C-A hg38:Y:14068566-C-A | ** | ||||||
| hg19:Y:4932037-G-T hg38:Y:5063996-G-T | ** | ||||||
| hg19:Y:15823931-C-A hg38:Y:13712051-C-A | ** | ||||||
| hg38:Y:10776522-C-T | ** | ||||||
| hg38:Y:10999887-T-TCCGTA | ** | ||||||
| hg19:Y:15323529-C-A hg38:Y:13211647-C-A | ** | ||||||
| hg38:Y:10832490-A-C | ** | ||||||
| hg19:Y:9040315-C-A hg38:Y:9202706-C-A | ** | ||||||
| hg38:Y:10986902-C-T | ** | ||||||
| hg19:Y:8333522-C-CTTG hg38:Y:8465481-C-CTTG | ** | ||||||
| hg38:Y:10781067-C-T | ** | ||||||
| hg19:Y:14574576-C-A hg38:Y:12462776-C-A | ** | ||||||
| hg19:Y:14042628-G-GA hg38:Y:11921922-G-GA | ** | ||||||
| hg38:Y:10868336-T-C | ** | ||||||
| hg38:Y:10664812-T-A | ** | ||||||
| hg19:Y:19066250-C-A hg38:Y:16954370-C-A | ** | ||||||
| hg19:Y:18636721-C-T hg38:Y:16524841-C-T | ** | ||||||
| hg19:Y:14768496-C-A hg38:Y:12656565-C-A | ** | ||||||
| hg19:Y:15104906-C-A hg38:Y:12992994-C-A | ** | ||||||
| hg19:Y:21694797-C-A hg38:Y:19532911-C-A | ** | ||||||
| hg19:Y:16750093-C-A hg38:Y:14638213-C-A | ** | ||||||
| hg19:Y:13885842-C-A hg38:Y:11765136-C-A | ** | ||||||
| hg19:Y:4417656-C-A hg38:Y:4549615-C-A | ** | ||||||
| hg38:Y:10955424-T-C | ** | ||||||
| hg19:Y:15113460-C-A hg38:Y:13001547-C-A | ** | ||||||
| hg19:Y:15288611-C-A hg38:Y:13176710-C-A | ** | ||||||
| hg38:Y:10938357-C-G | ** | ||||||
| hg19:Y:17717163-C-A hg38:Y:15605283-C-A | ** | ||||||
| hg19:Y:14376574-C-A hg38:Y:12255870-C-A | ** | ||||||
| hg19:Y:28601659-C-A hg38:Y:26455512-C-A | ** | ||||||
| hg38:Y:11026107-C-G | ** | ||||||
| hg19:Y:18816974-C-A hg38:Y:16705094-C-A | ** | ||||||
| hg38:Y:10868328-G-A | ** | ||||||
| hg19:Y:14395259-C-A hg38:Y:12274555-C-A | ** | ||||||
| hg19:Y:21308789-C-A hg38:Y:19146903-C-A | ** | ||||||
| hg19:Y:14297990-A-G hg38:Y:12177284-A-G | ** | ||||||
| hg19:Y:13229639-C-A hg38:Y:11073963-C-A | ** | ||||||
| hg38:Y:10781094-C-G | ** | ||||||
| hg38:Y:10781096-C-G | ** | ||||||
| hg38:Y:10781099-C-T | ** | ||||||
| hg19:Y:2745998-C-G hg38:Y:2877957-C-G | ** | ||||||
| hg19:Y:2860017-T-G hg38:Y:2991976-T-G | ** | ||||||
| hg19:Y:2901369-C-A hg38:Y:3033328-C-A | ** | ||||||
| hg19:Y:2981417-C-A hg38:Y:3113376-C-A | ** | ||||||
| hg19:Y:3285175-T-C hg38:Y:3417134-T-C | ** | ||||||
| hg19:Y:3766350-G-T hg38:Y:3898309-G-T | ** | ||||||
| hg19:Y:4077840-C-A hg38:Y:4209799-C-A | ** | ||||||
| hg19:Y:4229988-C-G hg38:Y:4361947-C-G | ** | ||||||
| hg19:Y:4460619-C-A hg38:Y:4592578-C-A | ** | ||||||
| hg19:Y:4811437-C-A hg38:Y:4943396-C-A | ** | ||||||
| hg19:Y:4901752-C-A hg38:Y:5033711-C-A | ** | ||||||
| hg19:Y:5068299-G-T hg38:Y:5200258-G-T | ** | ||||||
| hg19:Y:5199717-T-C hg38:Y:5331676-T-C | ** | ||||||
| hg19:Y:5274949-A-G hg38:Y:5406908-A-G | ** | ||||||
| hg19:Y:5817421-T-C hg38:Y:5949380-T-C | ** | ||||||
| hg19:Y:5998401-C-T hg38:Y:6130360-C-T | ** | ||||||
| hg19:Y:6445372-C-A hg38:Y:6577331-C-A | ** | ||||||
| hg19:Y:6514061-C-A hg38:Y:6646020-C-A | ** | ||||||
| hg19:Y:6580513-G-A hg38:Y:6712472-G-A | ** | ||||||
| hg19:Y:6730346-C-A hg38:Y:6862305-C-A | ** | ||||||
| hg19:Y:6773706-G-A hg38:Y:6905665-G-A | ** | ||||||
| hg19:Y:7011531-G-A hg38:Y:7143490-G-A | ** | ||||||
| hg19:Y:7011538-C-CTGTTT hg38:Y:7143497-C-CTGTTT | ** | ||||||
| hg19:Y:7011540-ACCTTG-A hg38:Y:7143499-ACCTTG-A | ** | ||||||
| hg19:Y:7100993-G-A hg38:Y:7232952-G-A | FTA30024 | ** | |||||
| hg19:Y:7203815-T-C hg38:Y:7335774-T-C | ** | ||||||
| hg19:Y:7208426-G-A hg38:Y:7340385-G-A | ** | ||||||
| hg19:Y:7286942-A-C hg38:Y:7418901-A-C | ** | ||||||
| hg19:Y:7384697-C-A hg38:Y:7516656-C-A | ** | ||||||
| hg19:Y:7489110-G-A hg38:Y:7621069-G-A | IR1_L | ** | |||||
| hg19:Y:7705470-C-A hg38:Y:7837429-C-A | ** | ||||||
| hg19:Y:8080427-CT-C hg38:Y:8212386-CT-C | ** | ||||||
| hg19:Y:8170328-C-T hg38:Y:8302287-C-T | ** | ||||||
| hg19:Y:8282430-A-C hg38:Y:8414389-A-C | ** | ||||||
| hg19:Y:8911815-T-C hg38:Y:9043774-T-C | ** | ||||||
| hg38:Y:9110046-G-T | ** | ||||||
| hg19:Y:9030391-A-C hg38:Y:9192782-A-C | ** | ||||||
| hg19:Y:9700766-G-T hg38:Y:9863157-G-T | IR3_Prx | ** | |||||
| hg19:Y:9735658-T-C hg38:Y:9898049-T-C | IR3_Prx | ** | |||||
| hg19:Y:9986213-T-G hg38:Y:10148604-T-G | ** | ||||||
| hg38:Y:10631006-T-A | ** | ||||||
| hg38:Y:10669515-ATTCCATT-A | ** | ||||||
| hg38:Y:10679523-C-A | ** | ||||||
| hg38:Y:10679570-A-C | ** | ||||||
| hg38:Y:10689161-C-A | ** | ||||||
| hg38:Y:10748260-T-C | ** | ||||||
| hg38:Y:10752529-C-A | ** | ||||||
| hg38:Y:10763109-T-A | ** | ||||||
| hg38:Y:10766637-T-G | ** | ||||||
| hg38:Y:10766639-A-G | ** | ||||||
| hg38:Y:10776510-T-C | ** | ||||||
| hg38:Y:10776530-T-C | ** | ||||||
| hg38:Y:10776535-T-C | ** | ||||||
| hg38:Y:10776540-T-C | ** | ||||||
| hg38:Y:10776601-C-A | ** | ||||||
| hg38:Y:10784992-A-T | ** | ||||||
| hg38:Y:10800968-T-C | ** | ||||||
| hg38:Y:10832407-G-C | FT91816 | ** | |||||
| hg38:Y:10832492-T-A | ** | ||||||
| hg38:Y:10832498-T-C | ** | ||||||
| hg38:Y:10836227-C-A | ** | ||||||
| hg38:Y:10893274-GCATTC-G | ** | ||||||
| hg38:Y:10900004-T-A | ** | ||||||
| hg38:Y:10912613-C-T | ** | ||||||
| hg38:Y:10938372-C-T | ** | ||||||
| hg38:Y:10938379-T-TTTCGA | ** | ||||||
| hg38:Y:10940273-C-T | ** | ||||||
| hg38:Y:10940284-T-C | ** | ||||||
| hg38:Y:10946381-T-A | ** | ||||||
| hg38:Y:10980254-C-A | ** | ||||||
| hg38:Y:10986881-C-T | ** | ||||||
| hg38:Y:10999875-A-AATTCTTTCCT | ** | ||||||
| hg38:Y:11000032-T-A | ** | ||||||
| hg38:Y:11035969-T-A | ** | ||||||
| hg19:Y:13200573-C-A hg38:Y:11044897-C-A | ** | ||||||
| hg19:Y:13217254-T-G hg38:Y:11061578-T-G | ** | ||||||
| hg19:Y:13315966-T-G hg38:Y:11160290-T-G | ** | ||||||
| hg19:Y:13324076-C-A hg38:Y:11168400-C-A | ** | ||||||
| hg19:Y:13468780-C-A hg38:Y:11313104-C-A | ** | ||||||
| hg19:Y:13487342-C-T hg38:Y:11331666-C-T | ** | ||||||
| hg19:Y:13488263-C-CT hg38:Y:11332587-C-CT | ** | ||||||
| hg19:Y:13488266-GA-G hg38:Y:11332590-GA-G | ** | ||||||
| hg19:Y:13575753-T-G hg38:Y:11420077-T-G | ** | ||||||
| hg19:Y:13633996-T-A hg38:Y:11478320-T-A | ** | ||||||
| hg38:Y:11664221-G-T | Z23518 | FT225519 | DYZ17 | ** | |||
| hg19:Y:13821788-G-T hg38:Y:11701082-G-T | DYZ17 | ** | |||||
| hg19:Y:13855418-A-G hg38:Y:11734712-A-G | DYZ17 | ** | |||||
| hg19:Y:13881223-T-G hg38:Y:11760517-T-G | ** | ||||||
| hg19:Y:13927912-T-G hg38:Y:11807206-T-G | ** | ||||||
| hg19:Y:13940618-C-T hg38:Y:11819912-C-T | ** | ||||||
| hg19:Y:14010797-A-G hg38:Y:11890091-A-G | ** | ||||||
| hg19:Y:14069029-C-A hg38:Y:11948323-C-A | ** | ||||||
| hg19:Y:14097903-C-A hg38:Y:11977197-C-A | ** | ||||||
| hg19:Y:14100075-G-T hg38:Y:11979369-G-T | ** | ||||||
| hg19:Y:14297977-G-T hg38:Y:12177271-G-T | ** | ||||||
| hg19:Y:14297993-C-T hg38:Y:12177287-C-T | ** | ||||||
| hg19:Y:14307739-C-T hg38:Y:12187033-C-T | ** | ||||||
| hg19:Y:14379267-C-T hg38:Y:12258563-C-T | ** | ||||||
| hg19:Y:14432532-C-A hg38:Y:12311805-C-A | ** | ||||||
| hg19:Y:14451871-G-T hg38:Y:12331144-G-T | ** | ||||||
| hg19:Y:14785606-T-G hg38:Y:12673676-T-G | ** | ||||||
| hg19:Y:14786670-C-T hg38:Y:12674740-C-T | ** | ||||||
| hg19:Y:15070511-T-C hg38:Y:12958602-T-C | ** | ||||||
| hg19:Y:15122278-G-A hg38:Y:13010365-G-A | ** | ||||||
| hg19:Y:15156162-A-C hg38:Y:13044249-A-C | ** | ||||||
| hg19:Y:15169265-C-A hg38:Y:13057351-C-A | ** | ||||||
| hg19:Y:15183935-A-C hg38:Y:13072021-A-C | ** | ||||||
| hg19:Y:15183937-A-C hg38:Y:13072023-A-C | ** | ||||||
| hg19:Y:15209213-T-G hg38:Y:13097299-T-G | ** | ||||||
| hg19:Y:15320537-A-T hg38:Y:13208643-A-T | ** | ||||||
| hg19:Y:15323509-G-A hg38:Y:13211627-G-A | ** | ||||||
| hg19:Y:15323511-G-C hg38:Y:13211629-G-C | ** | ||||||
| hg19:Y:15323520-C-T hg38:Y:13211638-C-T | ** | ||||||
| hg19:Y:15323521-A-G hg38:Y:13211639-A-G | FTB48474 | ** | |||||
| hg19:Y:15405356-T-A hg38:Y:13293476-T-A | ** | ||||||
| hg19:Y:15405365-A-AT hg38:Y:13293485-A-AT | ** | ||||||
| hg19:Y:15734350-C-A hg38:Y:13622470-C-A | ** | ||||||
| hg19:Y:15744677-C-A hg38:Y:13632797-C-A | ** | ||||||
| hg19:Y:16324048-A-C hg38:Y:14212168-A-C | ** | ||||||
| hg19:Y:16625820-T-G hg38:Y:14513940-T-G | ** | ||||||
| hg19:Y:16727126-G-T hg38:Y:14615246-G-T | ** | ||||||
| hg19:Y:16786112-A-G hg38:Y:14674232-A-G | ** | ||||||
| hg19:Y:16842687-C-T hg38:Y:14730807-C-T | FTA23991 | ** | |||||
| hg19:Y:16970439-A-C hg38:Y:14858559-A-C | ** | ||||||
| hg19:Y:16990171-C-A hg38:Y:14878291-C-A | ** | ||||||
| hg19:Y:16990188-C-T hg38:Y:14878308-C-T | ** | ||||||
| hg19:Y:16990193-C-T hg38:Y:14878313-C-T | ** | ||||||
| hg19:Y:17129933-C-A hg38:Y:15018053-C-A | ** | ||||||
| hg19:Y:17157512-C-A hg38:Y:15045632-C-A | ** | ||||||
| hg19:Y:17254837-T-C hg38:Y:15142957-T-C | ** | ||||||
| hg19:Y:17277034-C-A hg38:Y:15165154-C-A | ** | ||||||
| hg19:Y:17630977-C-A hg38:Y:15519097-C-A | FGC18988 | ** | |||||
| hg19:Y:18220016-A-T hg38:Y:16108136-A-T | BY170754 | ** | |||||
| hg19:Y:18235558-G-C hg38:Y:16123678-G-C | BY170756 | ** | |||||
| hg19:Y:18301219-A-T hg38:Y:16189339-A-T | P6_Prx | ** | |||||
| hg19:Y:18301241-A-T hg38:Y:16189361-A-T | P6_Prx | ** | |||||
| hg19:Y:18753147-G-A hg38:Y:16641267-G-A | ** | ||||||
| hg19:Y:18872031-T-G hg38:Y:16760151-T-G | 12×TTCC | ** | |||||
| hg19:Y:19007649-C-A hg38:Y:16895769-C-A | ** | ||||||
| hg19:Y:19009309-A-G hg38:Y:16897429-A-G | ** | ||||||
| hg19:Y:19107354-G-A hg38:Y:16995474-G-A | ** | ||||||
| hg19:Y:19244949-A-C hg38:Y:17133069-A-C | ** | ||||||
| hg19:Y:19479965-C-A hg38:Y:17368085-C-A | ** | ||||||
| hg19:Y:19527279-G-A hg38:Y:17415399-G-A | ** | ||||||
| hg19:Y:19948013-A-G hg38:Y:17836133-A-G | P5_Prx | ** | |||||
| hg19:Y:20297869-TTTTTTTTC-T hg38:Y:18135983-TTTTTTTTC-T | P5_Dst | ** | |||||
| hg19:Y:20815683-C-A hg38:Y:18653797-C-A | P4_Gap | ** | |||||
| hg19:Y:20989159-A-ATT hg38:Y:18827273-A-ATT | P4_Dst | ** | |||||
| hg19:Y:21253857-C-A hg38:Y:19091971-C-A | ** | ||||||
| hg19:Y:21382178-C-A hg38:Y:19220292-C-A | ** | ||||||
| hg19:Y:21458271-G-A hg38:Y:19296385-G-A | ** | ||||||
| hg19:Y:21543133-T-C hg38:Y:19381247-T-C | ** | ||||||
| hg19:Y:21681765-C-A hg38:Y:19519879-C-A | ** | ||||||
| hg19:Y:22026392-A-AT hg38:Y:19864506-A-AT | 8×T | ** | |||||
| hg19:Y:22040826-G-A hg38:Y:19878940-G-A | ** | ||||||
| hg19:Y:22427505-G-T hg38:Y:20265619-G-T | DYZ19 | ** | |||||
| hg19:Y:22427542-T-C hg38:Y:20265656-T-C | DYZ19 | ** | |||||
| hg19:Y:22436968-T-G hg38:Y:20275082-T-G | DYZ19 | ** | |||||
| hg19:Y:22520840-G-T hg38:Y:20358954-G-T | ** | ||||||
| hg19:Y:22590765-CA-C hg38:Y:20428879-CA-C | ** | ||||||
| hg19:Y:22770885-T-C hg38:Y:20608999-T-C | ** | ||||||
| hg19:Y:22783060-TTCATTTCAG-T hg38:Y:20621174-TTCATTTCAG-T | ** | ||||||
| hg19:Y:22810106-T-C hg38:Y:20648220-T-C | ** | ||||||
| hg19:Y:23098078-G-A hg38:Y:20936192-G-A | ** | ||||||
| hg19:Y:23290993-C-T hg38:Y:21129107-C-T | ** | ||||||
| hg19:Y:23306443-C-A hg38:Y:21144557-C-A | ** | ||||||
| hg19:Y:23395658-A-C hg38:Y:21233772-A-C | ** | ||||||
| hg19:Y:23421071-G-A hg38:Y:21259185-G-A | ** | ||||||
| hg19:Y:23511668-T-G hg38:Y:21349782-T-G | ** | ||||||
| hg19:Y:23609409-G-A hg38:Y:21447523-G-A | ** | ||||||
| hg19:Y:23623356-G-T hg38:Y:21461470-G-T | ** | ||||||
| hg19:Y:24407229-A-C hg38:Y:22261082-A-C | ** | ||||||
| hg19:Y:24420880-T-G hg38:Y:22274733-T-G | ** | ||||||
| hg19:Y:24446936-C-A hg38:Y:22300789-C-A | ** | ||||||
| hg19:Y:24513678-A-C hg38:Y:22367531-A-C | ** | ||||||
| hg19:Y:25256346-A-T hg38:Y:23110199-A-T | P2_r1 | ** | |||||
| hg19:Y:25256387-A-T hg38:Y:23110240-A-T | P2_r1 | ** | |||||
| hg19:Y:25954141-T-C hg38:Y:23807994-T-C | P1_Y1 | ** | |||||
| hg19:Y:26167819-C-A hg38:Y:24021672-C-A | P1_Y1 | ** | |||||
| hg19:Y:26228651-T-C hg38:Y:24082504-T-C | P1_Y1 | ** | |||||
| hg19:Y:28534721-T-G hg38:Y:26388574-T-G | ** | ||||||
| hg19:Y:28583135-C-A hg38:Y:26436988-C-A | ** | ||||||
| hg19:Y:28635732-A-T hg38:Y:26489585-A-T | ** | ||||||
| hg19:Y:28791227-G-A hg38:Y:26645080-G-A | ** | ||||||
| hg19:Y:28791233-G-T hg38:Y:26645086-G-T | ** | ||||||
| hg19:Y:28791263-C-T hg38:Y:26645116-C-T | ** | ||||||
| hg38:Y:56733830-T-C | ** | ||||||
| hg38:Y:56834619-A-C | ** | ||||||
| hg38:Y:56834633-C-G | ** | ||||||
| hg38:Y:56834648-C-T | ** | ||||||
| hg38:Y:56836255-C-A | ** | ||||||
| hg38:Y:56846315-A-C | ** | ||||||
| hg38:Y2:7696-G-A | ** | ||||||
| hg38:Y2:30643-T-A | ** | ||||||
| hg19:Y:22345808-C-A hg38:Y:20183922-C-A | DYZ19 | *** | |||||
| hg19:Y:14866140-C-CGTGTGT hg38:Y:12754206-C-CGT | 11×GT | *** | |||||
| hg19:Y:3865855-C-A hg38:Y:3997814-C-A | *** | ||||||
| hg19:Y:13513082-C-A hg38:Y:11357406-C-A | *** | ||||||
| hg19:Y:16018345-C-A hg38:Y:13906465-C-A | *** | ||||||
| hg19:Y:17419439-ATT-A,AT hg38:Y:15307559-ATT-A,AT | 25×T | *** | |||||
| hg19:Y:8706675-CAG-C,CAGAG hg38:Y:8838634-CAG-C,CAGAG | 15×AG | *** | |||||
| hg19:Y:23792029-CTTTT-C hg38:Y:21630143-CTTTT-C | 15×T | *** | |||||
| hg19:Y:14106917-C-A hg38:Y:11986211-C-A | *** | ||||||
| hg38:Y:10958365-A-G | *** | ||||||
| hg19:Y:22527307-C-A hg38:Y:20365421-C-A | *** | ||||||
| hg19:Y:15076180-CTT-C,CTTT hg38:Y:12964270-CTT-C,CTTT | 16×T | *** | |||||
| hg19:Y:14862021-A-AT,ATT hg38:Y:12750087-A-AT,ATT | 12×T | *** | |||||
| hg19:Y:14005941-C-A hg38:Y:11885235-C-A | *** | ||||||
| hg19:Y:21556532-C-A hg38:Y:19394646-C-A | *** | ||||||
| hg19:Y:15219729-C-CT hg38:Y:13107815-C-CT | 9×T | *** | |||||
| hg19:Y:13798872-G-T hg38:Y:11678166-G-T | DYZ17 | *** | |||||
| hg19:Y:4665540-C-A hg38:Y:4797499-C-A | *** | ||||||
| hg19:Y:6492338-C-A hg38:Y:6624297-C-A | *** | ||||||
| hg19:Y:7222536-C-T hg38:Y:7354495-C-T | *** | ||||||
| hg19:Y:8720794-C-A hg38:Y:8852753-C-A | *** | ||||||
| hg19:Y:8806465-C-A hg38:Y:8938424-C-A | *** | ||||||
| hg38:Y:10817730-C-A | *** | ||||||
| hg19:Y:13453639-A-T hg38:Y:11297963-A-T | *** | ||||||
| hg19:Y:13453644-A-T hg38:Y:11297968-A-T | *** | ||||||
| hg19:Y:13880605-C-A hg38:Y:11759899-C-A | *** | ||||||
| hg19:Y:13887881-C-A hg38:Y:11767175-C-A | *** | ||||||
| hg19:Y:14266583-T-C hg38:Y:12145877-T-C | *** | ||||||
| hg19:Y:14392038-C-A hg38:Y:12271334-C-A | *** | ||||||
| hg19:Y:14393851-G-T hg38:Y:12273147-G-T | *** | ||||||
| hg19:Y:15274768-C-A hg38:Y:13162857-C-A | *** | ||||||
| hg19:Y:15654743-C-A hg38:Y:13542863-C-A | *** | ||||||
| hg19:Y:16007520-GA-G hg38:Y:13895640-GA-G | *** | ||||||
| hg19:Y:16084119-C-T hg38:Y:13972239-C-T | *** | ||||||
| hg19:Y:16593241-G-A hg38:Y:14481361-G-A | *** | ||||||
| hg19:Y:17844253-G-A hg38:Y:15732373-G-A | *** | ||||||
| hg19:Y:19383123-C-A hg38:Y:17271243-C-A | *** | ||||||
| hg19:Y:21163275-C-A hg38:Y:19001389-C-A | *** | ||||||
| hg19:Y:21407738-C-A hg38:Y:19245852-C-A | *** | ||||||
| hg19:Y:22201841-C-A hg38:Y:20039955-C-A | *** | ||||||
| hg19:Y:23452196-A-G hg38:Y:21290310-A-G | *** | ||||||
| hg19:Y:23761654-A-AAGC hg38:Y:21599768-A-AAGC | *** | ||||||
| hg38:Y:56831858-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: MI20207 | 9292435 | 7669844 | 7628646 |
| Used in age calculations | 9292435 | 7669844 | 7628646 |
| Counts of SNPs | 21 | 26 |
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