Williams
BigY3: B83524, BigY2: B83524MDKA Birth: United Kingdom
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 B83524 | BigY2 B83524 |
---|---|---|---|---|---|---|---|---|---|
22265260-C-T | 20103374-C-T | DYZ19 | A* | A* | |||||
3012228-G-T | 3144187-G-T | A* | |||||||
13687077-A-G | 11531401-A-G | DYZ17 | A* | A* | |||||
22234179-A-C | 20072293-A-C | DYZ19 | A* | A* | |||||
24294371-C-A | 22148224-C-A | P3_t1 | A* | A* | |||||
26004523-C-A | 23858376-C-A | P1_Y1 | A* | A* | |||||
26039444-T-C | 23893297-T-C | P1_Y1 | A* | A* | |||||
26186591-T-C | 24040444-T-C | P1_Y1 | A* | A* | |||||
28816785-A-G | 26670638-A-G | A* | A* | ||||||
13451032-A-T | 11295356-A-T | A* | |||||||
13451038-T-C | 11295362-T-C | A* | |||||||
13451045-C-A | 11295369-C-A | A* | |||||||
18374919-C-T | 16263039-C-T | P6_Prx | A* | ||||||
19650898-A-G | 17539018-A-G | P5_Prx | A* | ||||||
19790420-A-G | 17678540-A-G | P5_Prx | A* | ||||||
19865017-T-G | 17753137-T-G | P5_Prx | A* | ||||||
22468859-G-C | 20306973-G-C | BY177842 | DYZ19 | + | + | ||||
7252645-G-A | 7384604-G-A | Y | Y | + | + | ||||
7634391-A-G | 7766350-A-G | BY42722 | Y | Y | + | + | |||
7654855-G-A | 7786814-G-A | BY152664 | Y | Y | + | + | |||
7776707-G-A | 7908666-G-A | BY178154 | Y | Y | ** | + | |||
8189819-G-A | 8321778-G-A | BY178246 | Y | Y | + | + | |||
8194707-G-C | 8326666-G-C | BY42751 | Y | Y | + | + | |||
8352896-A-C | 8484855-A-C | BY42761 | Y | Y | + | + | |||
8410604-C-T | 8542563-C-T | BY178284 | Y | Y | + | + | |||
8478445-A-G | 8610404-A-G | BY178310 | Y | Y | + | + | |||
9091097-A-T | 9253488-A-T | BY178437 | Y | + | + | ||||
9166972-A-G | 9329363-A-G | BY178465 | Y | ** | + | ||||
9447180-A-G | 9609571-A-G | BY178483 | Y | Y | + | + | |||
9798235-T-C | 9960626-T-C | FT370024 | Y | Y | + | ** | |||
11037983-C-G | + | ** | |||||||
13678657-T-A | 11522981-T-A | BY210882 | DYZ17 | + | + | ||||
14702708-T-C | 12590774-T-C | BY178701 | Y | Y | + | + | |||
15441128-A-G | 13329248-A-G | BY178818 | Y | Y | + | + | |||
15578173-A-T | 13466293-A-T | FT370045 | Y | Y | + | ** | |||
15954124-T-G | 13842244-T-G | BY178904 | Y | Y | + | + | |||
16330410-C-T | 14218530-C-T | Y | Y | + | + | ||||
16433669-C-G | 14321789-C-G | BY178994 | Y | Y | + | + | |||
16483249-T-C | 14371369-T-C | BY179006 | Y | Y | + | + | |||
16521131-T-C | 14409251-T-C | BY179015 | Y | Y | + | + | |||
17312171-T-C | 15200291-T-C | BY179155 | Y | Y | + | + | |||
18991583-G-A | 16879703-G-A | BY179467 | Y | Y | + | + | |||
19187071-G-T | 17075191-G-T | FT370085 | Y | + | ** | ||||
19214038-C-A | 17102158-C-A | BY179524 | Y | Y | + | + | |||
19461818-A-T | 17349938-A-T | FT370089 | Y | Y | + | ** | |||
21150532-A-C | 18988646-A-C | Y | + | + | |||||
21480632-T-A | 19318746-T-A | BY43615 | Y | Y | + | + | |||
21550951-T-A | 19389065-T-A | BY179694 | Y | Y | ** | + | |||
21620843-G-A | 19458957-G-A | BY179708 | Y | Y | + | + | |||
22294196-G-C | 20132310-G-C | FT455263 | DYZ19 | + | + | ||||
22440701-G-A | 20278815-G-A | BY177826 | DYZ19 | ** | + | ||||
22461770-A-G | 20299884-A-G | BY220742 | DYZ19 | + | + | ||||
22462331-C-G | 20300445-C-G | BY220871 | DYZ19 | + | + | ||||
22476600-A-C | 20314714-A-C | BY223616 | DYZ19 | ** | + | ||||
22591808-CT-C | 20429922-CT-C | + | + | ||||||
23164934-A-G | 21003048-A-G | BY179955 | Y | + | + | ||||
23349199-T-C | 21187313-T-C | BY179994 | Y | Y | + | + | |||
23729359-T-G | 21567473-T-G | BY180073 | + | + | |||||
23870715-A-C | 21708829-A-C | BY180114 | Y | + | + | ||||
28648919-A-G | 26502772-A-G | BY180165 | Y | + | + | ||||
10654-T-A | + | ||||||||
4548895-T-A | 4680854-T-A | 8×A | + | ||||||
5507559-T-C | 5639518-T-C | FT214957 | + | ||||||
6526936-A-C | 6658895-A-C | FT370470 | + | ||||||
7240774-C-T | 7372733-C-T | FT370009 | Y | + | |||||
7379283-G-T | 7511242-G-T | FT370011 | Y | + | |||||
10986085-G-T | FT419550 | + | |||||||
14017047-A-G | 11896341-A-G | Y | + | ||||||
18187031-C-T | 16075151-C-T | FT370074 | Y | + | |||||
22037664-C-G | 19875778-C-G | FT370098 | Y | Y | + | ||||
22283877-G-C | 20121991-G-C | DYZ19 | * | ||||||
13868384-TGGAAT-T,TGGAAC | 11747678-TGGAAT-T,TGGAAC | DYZ17 | * | ||||||
18365541-A-G | 16253661-A-G | BY55072 | P6_Prx | 20×TG | * | * | |||
13868370-CGAATG-C | 11747664-CGAATG-C | DYZ17 | 4×GAATG | * | |||||
18443542-T-C | 16331662-T-C | FT96918 | P6_Dst | * | |||||
22236999-C-A | 20075113-C-A | DYZ19 | ** | * | |||||
22253367-A-T | 20091481-A-T | FT453634 | DYZ19 | *** | * | ||||
22277053-C-G | 20115167-C-G | DYZ19 | *** | * | |||||
22306948-A-G | 20145062-A-G | DYZ19 | ** | * | |||||
18612803-A-G | 16500923-A-G | Y22986 | ZS5100 | ** | |||||
8130510-G-A | 8262469-G-A | L56 | Y728 M1075 | ** | |||||
18454801-TTC-T | 16342921-TTC-T | P6_Dst | ** | ||||||
19467008-C-A | 17355128-C-A | ** | |||||||
18454879-CCCTTTCTT-C | 16342999-CCCTTTCTT-C | P6_Dst | ** | ||||||
58991302-C-T | 56845155-C-T | ** | |||||||
58989931-A-G | 56843784-A-G | ** | |||||||
26514931-TCA-T | 24368784-TCA-T | P1_Y1 | 9×CA | ** | |||||
28457748-C-CA | 26311601-C-CA | 21×A | ** | ||||||
58990249-T-C | 56844102-T-C | ** | |||||||
15992284-A-G | 13880404-A-G | FGC67685 | ** | ||||||
13870386-A-G | 11749680-A-G | ** | |||||||
23807460-G-A | 21645574-G-A | ** | |||||||
27155028-A-T | 25008881-A-T | P1_g3 | ** | ||||||
15140655-G-GA | 13028742-G-GA | 9×A | ** | ||||||
22166529-C-A | 20004643-C-A | ** | |||||||
14159713-G-T | 12039007-G-T | ** | |||||||
10786388-C-A | ** | ||||||||
22263605-C-A | 20101719-C-A | DYZ19 | ** | ||||||
10790521-C-A | ** | ||||||||
10629056-C-A | ** | ||||||||
23807442-A-T | 21645556-A-T | Y38170 | ** | ||||||
23807443-G-A | 21645557-G-A | ** | |||||||
10989866-C-T | ** | ||||||||
19079033-C-A | 16967153-C-A | ** | |||||||
21146274-CCT-C | 18984388-CCT-C | ** | |||||||
10983969-C-CCGCTT | ** | ||||||||
10983978-T-G | ** | ||||||||
10983979-C-G | ** | ||||||||
10983999-C-T | ** | ||||||||
10984000-C-CATTTA | ** | ||||||||
19226544-C-A | 17114664-C-A | ** | |||||||
11030671-C-T | ** | ||||||||
11030697-C-T | ** | ||||||||
10971269-C-A | ** | ||||||||
9125571-A-T | ** | ||||||||
18398192-CATATATATATAT-C | 16286312-CATATATATATAT-C | P6_Gap | 15×AT | ** | |||||
5249677-C-A | 5381636-C-A | ** | |||||||
7340302-C-A | 7472261-C-A | ** | |||||||
7131403-C-T | 7263362-C-T | ** | |||||||
22729245-GAAA-G | 20567359-GAAA-G | 13×A | ** | ||||||
22722468-T-C | 20560582-T-C | ** | |||||||
13705490-G-A | 11549814-G-A | DYZ17 | ** | ||||||
22722485-T-C | 20560599-T-C | ** | |||||||
11019354-C-A | ** | ||||||||
10930806-C-A | ** | ||||||||
17490335-C-A | 15378455-C-A | ** | |||||||
10803648-C-T | ** | ||||||||
6944038-C-T | 7075997-C-T | BY178017 | ** | ||||||
13935153-C-A | 11814447-C-A | ** | |||||||
10804501-T-C | ** | ||||||||
7381869-A-G | 7513828-A-G | ** | |||||||
10763012-A-G | ** | ||||||||
19701525-C-A | 17589645-C-A | P5_Prx | ** | ||||||
56845978-G-T | ** | ||||||||
4995923-C-A | 5127882-C-A | ** | |||||||
23807441-G-A | 21645555-G-A | ** | |||||||
14187372-C-A | 12066666-C-A | ** | |||||||
56756830-A-C | ** | ||||||||
56756850-A-C | ** | ||||||||
6734835-C-A | 6866794-C-A | ** | |||||||
7381846-T-C | 7513805-T-C | ** | |||||||
7409696-G-T | 7541655-G-T | ** | |||||||
14297256-C-T | 12176550-C-T | ** | |||||||
14297257-A-G | 12176551-A-G | ** | |||||||
23429905-G-A | 21268019-G-A | ** | |||||||
4244622-A-ATT | 4376581-A-ATT | 16×T | ** | ||||||
6903160-G-GA | 7035119-G-GA | 9×A | ** | ||||||
10935476-C-A | ** | ||||||||
10983962-T-TTTCAC | ** | ||||||||
19091560-C-A | 16979680-C-A | ** | |||||||
23825669-G-T | 21663783-G-T | ** | |||||||
9048062-G-T | 9210453-G-T | ** | |||||||
8428944-CAAAAAAAA-C | 8560903-CAAAAAAAA-C | 25×A | ** | ||||||
10799145-GTCCAT-G | ** | ||||||||
21262568-C-A | 19100682-C-A | FT348264 | ** | ||||||
10805269-G-T | ** | ||||||||
10938778-C-A | ** | ||||||||
20816923-TCA-T | 18655037-TCA-T | P4_Gap | ** | ||||||
6458285-C-A | 6590244-C-A | ** | |||||||
14819647-G-T | 12707714-G-T | ** | |||||||
23381918-G-A | 21220032-G-A | ** | |||||||
23837561-G-T | 21675675-G-T | FTA13611 | ** | ||||||
23807436-C-T | 21645550-C-T | ** | |||||||
14357806-C-A | 12237101-C-A | ** | |||||||
23807452-C-T | 21645566-C-T | ** | |||||||
23807472-C-T | 21645586-C-T | ** | |||||||
10935449-C-T | ** | ||||||||
19047938-C-A | 16936058-C-A | ** | |||||||
15871770-ATTT-A | 13759890-ATTT-A | 8×T | ** | ||||||
10911563-C-A | ** | ||||||||
13227358-C-A | 11071682-C-A | ** | |||||||
18973201-C-A | 16861321-C-A | ** | |||||||
17584287-C-T | 15472407-C-T | ** | |||||||
5585964-C-A | 5717923-C-A | ** | |||||||
56844075-A-G | ** | ||||||||
18443540-CAT-C | 16331660-CAT-C | P6_Dst | *** | ** | |||||
10935461-C-G | ** | ||||||||
56849671-C-A | ** | ||||||||
15816220-C-A | 13704340-C-A | ** | |||||||
10666918-C-G | ** | ||||||||
2850879-G-T | 2982838-G-T | ** | |||||||
3712297-T-C | 3844256-T-C | ** | |||||||
14339086-C-A | 12218381-C-A | ** | |||||||
14969189-G-A | 12857264-G-A | ** | |||||||
10935469-CTCCAA-C | ** | ||||||||
23429891-G-C | 21268005-G-C | ** | |||||||
28755115-C-A | 26608968-C-A | ** | |||||||
17714992-C-A | 15603112-C-A | ** | |||||||
6911184-C-A | 7043143-C-A | ** | |||||||
19303765-C-A | 17191885-C-A | ** | |||||||
15648784-C-A | 13536904-C-A | ** | |||||||
14509470-C-A | 12397675-C-A | ** | |||||||
18278111-C-A | 16166231-C-A | P6_Prx | ** | ||||||
28461102-C-A | 26314955-C-A | ** | |||||||
11665439-C-A | FT450889 | DYZ17 | ** | ||||||
10855897-G-T | ** | ||||||||
17394020-G-A | 15282140-G-A | ** | |||||||
15871764-T-C | 13759884-T-C | ** | |||||||
7028370-C-A | 7160329-C-A | ** | |||||||
2783632-C-A | 2915591-C-A | ** | |||||||
3436288-G-T | 3568247-G-T | FT91841 | FT77848 | ** | |||||
10859868-A-C | ** | ||||||||
14474972-C-A | 12354241-C-A | ** | |||||||
14981640-A-G | 12869716-A-G | ** | |||||||
13982893-C-A | 11862187-C-A | ** | |||||||
14969224-A-G | 12857299-A-G | ** | |||||||
14061519-C-A | 11940813-C-A | ** | |||||||
15336890-C-A | 13225008-C-A | ** | |||||||
14969192-T-C | 12857267-T-C | ** | |||||||
13202549-C-A | 11046873-C-A | ** | |||||||
14969188-T-C | 12857263-T-C | ** | |||||||
16757211-C-T | 14645331-C-T | BY109862 | ** | ||||||
11005543-A-C | ** | ||||||||
23248375-C-A | 21086489-C-A | ** | |||||||
21487367-C-A | 19325481-C-A | ** | |||||||
9048133-G-T | 9210524-G-T | ** | |||||||
13238358-G-A | 11082682-G-A | ** | |||||||
21299266-C-A | 19137380-C-A | ** | |||||||
15536442-C-CA | 13424562-C-CA | ** | |||||||
2696545-C-T | 2828504-C-T | ** | |||||||
2708786-G-A | 2840745-G-A | ** | |||||||
2917919-G-T | 3049878-G-T | ** | |||||||
2980762-C-A | 3112721-C-A | ** | |||||||
3347450-C-A | 3479409-C-A | ** | |||||||
3436514-G-T | 3568473-G-T | ** | |||||||
3539501-C-A | 3671460-C-A | ** | |||||||
3681431-T-A | 3813390-T-A | ** | |||||||
3712299-C-T | 3844258-C-T | ** | |||||||
4236056-T-C | 4368015-T-C | ** | |||||||
4353713-A-G | 4485672-A-G | FT401003 | ** | ||||||
4567748-C-A | 4699707-C-A | ** | |||||||
4616648-T-A | 4748607-T-A | ** | |||||||
4930689-A-G | 5062648-A-G | ** | |||||||
6419051-T-TGC | 6551010-T-TGC | ** | |||||||
6424775-A-C | 6556734-A-C | ** | |||||||
6877926-A-C | 7009885-A-C | ** | |||||||
6955253-C-T | 7087212-C-T | ** | |||||||
6979650-C-A | 7111609-C-A | ** | |||||||
7221541-C-A | 7353500-C-A | ** | |||||||
7222957-C-T | 7354916-C-T | ** | |||||||
7303116-C-A | 7435075-C-A | ** | |||||||
7359104-ACTTTAT-A | 7491063-ACTTTAT-A | ** | |||||||
7381847-G-A | 7513806-G-A | ** | |||||||
7469830-T-C | 7601789-T-C | IR1_L | ** | ||||||
7562259-C-T | 7694218-C-T | ** | |||||||
7758117-A-C | 7890076-A-C | ** | |||||||
7758121-T-A | 7890080-T-A | ** | |||||||
7758125-A-T | 7890084-A-T | ** | |||||||
7777072-C-A | 7909031-C-A | ** | |||||||
8171814-C-A | 8303773-C-A | ** | |||||||
8720092-C-A | 8852051-C-A | ** | |||||||
8721320-C-A | 8853279-C-A | ** | |||||||
8721865-C-A | 8853824-C-A | ** | |||||||
9125559-G-A | ** | ||||||||
9211352-A-C | 9373743-A-C | 22×AC | ** | ||||||
9454003-C-A | 9616394-C-A | ** | |||||||
9938343-G-T | 10100734-G-T | ** | |||||||
10011793-T-G | 10174184-T-G | ** | |||||||
10629038-A-ACTGCG | ** | ||||||||
10629053-A-G | ** | ||||||||
10654103-C-CCCCAGGCCTCTCCTG | ** | ||||||||
10773056-C-A | ** | ||||||||
10778800-A-G | ** | ||||||||
10780013-C-A | ** | ||||||||
10788695-C-T | FT73635 | ** | |||||||
10822563-C-A | ** | ||||||||
10822705-C-A | ** | ||||||||
10831645-C-G | ** | ||||||||
10837452-T-G | ** | ||||||||
10844131-T-C | ** | ||||||||
10865351-C-A | ** | ||||||||
10884579-C-A | ** | ||||||||
10885991-C-A | ** | ||||||||
10951333-C-T | ** | ||||||||
10951334-A-G | ** | ||||||||
10951354-A-C | ** | ||||||||
10951358-A-C | ** | ||||||||
10951365-A-T | ** | ||||||||
10951370-C-T | ** | ||||||||
10963513-G-A | ** | ||||||||
10979441-T-A | ** | ||||||||
10983585-A-T | ** | ||||||||
10983618-C-CGTTCT | ** | ||||||||
11000883-C-A | ** | ||||||||
11005480-TTCCACTCCAC-T | ** | ||||||||
11005532-C-T | ** | ||||||||
11005551-C-G | ** | ||||||||
11005556-C-A | ** | ||||||||
11006147-C-A | ** | ||||||||
11025105-C-A | ** | ||||||||
13238357-T-C | 11082681-T-C | ** | |||||||
13495811-T-A | 11340135-T-A | ** | |||||||
13594304-C-A | 11438628-C-A | ** | |||||||
13720549-G-A | 11564873-G-A | DYZ17 | ** | ||||||
11673572-G-A | DYZ17 | ** | |||||||
13860702-T-G | 11739996-T-G | DYZ17 | ** | ||||||
13887483-G-A | 11766777-G-A | ** | |||||||
14003653-C-A | 11882947-C-A | ** | |||||||
14025719-A-G | 11905013-A-G | ** | |||||||
14144110-A-T | 12023404-A-T | ** | |||||||
14230240-A-G | 12109534-A-G | ** | |||||||
14371276-G-T | 12250572-G-T | ** | |||||||
14383736-T-C | 12263032-T-C | FT242708 | ** | ||||||
14768594-T-C | 12656663-T-C | ** | |||||||
14798769-A-G | 12686840-A-G | ** | |||||||
14798789-A-G | 12686860-A-G | ** | |||||||
14926192-G-A | 12814257-G-A | ** | |||||||
14969177-A-G | 12857252-A-G | ** | |||||||
14969178-G-C | 12857253-G-C | ** | |||||||
14969207-T-G | 12857282-T-G | ** | |||||||
14969210-TTAA-T | 12857285-TTAA-T | ** | |||||||
14969216-GAGAC-G | 12857291-GAGAC-G | ** | |||||||
14981643-C-T | 12869719-C-T | ** | |||||||
14981644-A-C | 12869720-A-C | ** | |||||||
15156839-C-A | 13044926-C-A | ** | |||||||
15185119-A-C | 13073205-A-C | ** | |||||||
15209175-C-A | 13097261-C-A | ** | |||||||
15457970-T-C | 13346090-T-C | ** | |||||||
15572521-C-A | 13460641-C-A | ** | |||||||
15745488-C-A | 13633608-C-A | ** | |||||||
15808971-A-C | 13697091-A-C | ** | |||||||
15871765-G-A | 13759885-G-A | ** | |||||||
15905090-A-G | 13793210-A-G | ** | |||||||
16084138-C-A | 13972258-C-A | ** | |||||||
16085357-C-A | 13973477-C-A | ** | |||||||
16302699-C-A | 14190819-C-A | ** | |||||||
16437967-A-C | 14326087-A-C | ** | |||||||
16648340-G-A | 14536460-G-A | ** | |||||||
16704322-G-T | 14592442-G-T | ** | |||||||
16823821-G-A | 14711941-G-A | ** | |||||||
16863633-A-G | 14751753-A-G | ** | |||||||
16922205-T-G | 14810325-T-G | ** | |||||||
16930580-C-A | 14818700-C-A | ** | |||||||
17078705-G-T | 14966825-G-T | ** | |||||||
17101656-TC-T | 14989776-TC-T | ** | |||||||
17204191-A-G | 15092311-A-G | ** | |||||||
17222828-C-T | 15110948-C-T | ** | |||||||
17387463-A-G | 15275583-A-G | ** | |||||||
17387486-T-G | 15275606-T-G | ** | |||||||
17557898-C-A | 15446018-C-A | ** | |||||||
17584274-G-T | 15472394-G-T | ** | |||||||
17648689-C-A | 15536809-C-A | ** | |||||||
18223881-A-C | 16112001-A-C | ** | |||||||
18402420-T-C | 16290540-T-C | P6_Gap | ** | ||||||
18542882-C-A | 16431002-C-A | ** | |||||||
18554370-C-A | 16442490-C-A | ** | |||||||
18630910-A-T | 16519030-A-T | ** | |||||||
18836178-T-G | 16724298-T-G | ** | |||||||
18839032-C-A | 16727152-C-A | ** | |||||||
18926922-A-G | 16815042-A-G | ** | |||||||
20629111-T-G | 18467225-T-G | P4_Prx | ** | ||||||
20674805-T-C | 18512919-T-C | P4_Prx | ** | ||||||
20947767-T-A | 18785881-T-A | P4_Dst | ** | ||||||
21092738-G-C | 18930852-G-C | ** | |||||||
21167460-C-T | 19005574-C-T | ** | |||||||
21208910-C-A | 19047024-C-A | ** | |||||||
21334047-C-A | 19172161-C-A | ** | |||||||
21563146-A-G | 19401260-A-G | ** | |||||||
21563151-G-A | 19401265-G-A | ** | |||||||
21563161-G-A | 19401275-G-A | ** | |||||||
21617790-A-G | 19455904-A-G | ** | |||||||
21708294-T-C | 19546408-T-C | ** | |||||||
21923949-C-G | 19762063-C-G | ** | |||||||
21923954-T-C | 19762068-T-C | ** | |||||||
21923955-G-C | 19762069-G-C | ** | |||||||
21950101-AATT-A | 19788215-AATT-A | 5×ATT | ** | ||||||
22101925-T-C | 19940039-T-C | ** | |||||||
22173931-C-A | 20012045-C-A | ** | |||||||
22234795-C-A | 20072909-C-A | DYZ19 | ** | ||||||
22722472-C-T | 20560586-C-T | FT182480 | ** | ||||||
22847881-A-C | 20685995-A-C | ** | |||||||
23253225-T-G | 21091339-T-G | ** | |||||||
23253265-G-A | 21091379-G-A | ** | |||||||
23277638-G-A | 21115752-G-A | ** | |||||||
23331146-G-A | 21169260-G-A | ** | |||||||
23425182-A-T | 21263296-A-T | ** | |||||||
23429919-AAA-T | 21268033-AAA-T | ** | |||||||
23429926-T-C | 21268040-T-C | ** | |||||||
23523773-G-A | 21361887-G-A | ** | |||||||
23523773-G-GA | 21361887-G-GA | ** | |||||||
24416965-C-G | 22270818-C-G | ** | |||||||
26154079-C-A | 24007932-C-A | P1_Y1 | ** | ||||||
26154117-G-T | 24007970-G-T | P1_Y1 | ** | ||||||
26229970-C-A | 24083823-C-A | P1_Y1 | ** | ||||||
27398533-A-C | 25252386-A-C | P1_g3 | ** | ||||||
27603584-A-C | 25457437-A-C | P1_Y2 | ** | ||||||
27714419-A-G | 25568272-A-G | P1_Y2 | ** | ||||||
27714431-C-T | 25568284-C-T | P1_Y2 | ** | ||||||
27859537-CATGG-C | 25713390-CATGG-C | P1_Y2 | ** | ||||||
28469214-T-C | 26323067-T-C | ** | |||||||
28558436-T-C | 26412289-T-C | ** | |||||||
28719897-T-C | 26573750-T-C | ** | |||||||
56844078-G-A | ** | ||||||||
56844092-C-A | ** | ||||||||
56844111-C-A | ** | ||||||||
3458362-T-C | 3590321-T-C | ** | |||||||
4203963-A-G | 4335922-A-G | ** | |||||||
6008670-C-T | 6140629-C-T | ** | |||||||
7014553-T-A | 7146512-T-A | ** | |||||||
7577686-T-C | 7709645-T-C | ** | |||||||
9410381-G-A | 9572772-G-A | ** | |||||||
9627137-G-T | 9789528-G-T | IR3_Prx | ** | ||||||
17407635-C-A | 15295755-C-A | FT419545 | ** | ||||||
17779417-A-G | 15667537-A-G | FT419546 | ** | ||||||
18101271-T-G | 15989391-T-G | FT419547 | ** | ||||||
22778421-G-A | 20616535-G-A | FT419549 | ** | ||||||
24267224-C-A | 22121077-C-A | P3_b1 | ** | ||||||
28525908-A-G | 26379761-A-G | FT218653 | ** | ||||||
28543620-G-A | 26397473-G-A | FT419544 | ** | ||||||
13805225-T-G | 11684519-T-G | DYZ17 | *** | ||||||
22996969-G-GAT | 20835083-G-GAT | 21×AT | *** | ||||||
17004369-T-C | 14892489-T-C | *** | |||||||
10676833-C-T | *** | ||||||||
10884561-C-A | *** | ||||||||
14151642-C-A | 12030936-C-A | *** | |||||||
22085440-C-A | 19923554-C-A | *** | |||||||
13922430-C-A | 11801724-C-A | *** | |||||||
10995850-ACTTCC-A,ACTCCA | *** | ||||||||
18253562-C-A | 16141682-C-A | *** | |||||||
10937435-AATT-A | *** | ||||||||
3790887-TA-T | 3922846-TA-T | *** | |||||||
19391119-G-T | 17279239-G-T | *** | |||||||
21584463-T-C | 19422577-T-C | *** | |||||||
13194312-T-G | 11038636-T-G | *** | |||||||
23475536-G-T | 21313650-G-T | *** | |||||||
10666935-A-T | *** | ||||||||
2955378-CATAT-C | 3087337-CATAT-C | 9×AT | *** | ||||||
14395322-C-A | 12274618-C-A | *** | |||||||
10666958-C-CCATTG | *** | ||||||||
18235683-CA-C,CAA | 16123803-CA-C,CAA | 12×A | *** | ||||||
10952587-C-A | *** | ||||||||
15412771-CTTT-C,CTT | 13300891-CTTT-C,CTT | 15×T | *** | ||||||
23350708-C-A | 21188822-C-A | *** | |||||||
16094066-C-A | 13982186-C-A | *** | |||||||
15786363-C-A | 13674483-C-A | *** | |||||||
28608727-C-A | 26462580-C-A | *** | |||||||
2730125-T-C | 2862084-T-C | *** | |||||||
6000622-G-T | 6132581-G-T | BY44845 | *** | ||||||
9426941-A-T | 9589332-A-T | *** | |||||||
10746619-A-T | *** | ||||||||
10778078-C-A | *** | ||||||||
13642476-C-A | 11486800-C-A | *** | |||||||
15180536-C-A | 13068622-C-A | *** | |||||||
15341884-T-C | 13230003-T-C | *** | |||||||
15654814-C-A | 13542934-C-A | *** | |||||||
15992169-C-A | 13880289-C-A | *** | |||||||
16532848-C-A | 14420968-C-A | *** | |||||||
16603134-C-A | 14491254-C-A | *** | |||||||
17004372-A-G | 14892492-A-G | *** | |||||||
18204150-C-A | 16092270-C-A | *** | |||||||
18768717-C-A | 16656837-C-A | *** | |||||||
18778757-C-A | 16666877-C-A | *** | |||||||
18858358-CT-C | 16746478-CT-C | *** | |||||||
18858380-A-G | 16746500-A-G | *** | |||||||
19223527-A-G | 17111647-A-G | *** | |||||||
21438926-C-A | 19277040-C-A | *** | |||||||
21845818-C-A | 19683932-C-A | *** | |||||||
21976368-C-A | 19814482-C-A | *** | |||||||
22188726-CAC-C,CA | 20026840-CAC-C,CA | *** | |||||||
22888392-C-A | 20726506-C-A | *** | |||||||
23315864-T-C | 21153978-T-C | *** | |||||||
23382008-C-A | 21220122-C-A | *** | |||||||
23414017-A-G | 21252131-A-G | *** | |||||||
23475969-C-A | 21314083-C-A | *** | |||||||
23484452-G-A | 21322566-G-A | *** | |||||||
23742149-T-C | 21580263-T-C | *** | |||||||
56707213-G-A | *** | ||||||||
56835305-CAA-CAG,G | *** | ||||||||
2806030-ATTTT-A,ATTTTT | 2937989-ATTTT-A,ATTTTT | 16×T | *** | ||||||
7363157-TA-T,TAA | 7495116-TA-T,TAA | 18×A | *** | ||||||
3603491-ATTT-A,AT | 3735450-ATTT-A,AT | 24×T | *** | ||||||
19720709-ATTT-A,ATT | 17608829-ATTT-A,ATT | P5_Prx | 23×T | *** | |||||
5887228-CAAA-C,CA | 6019187-CAAA-C,CA | 18×A | *** | ||||||
16051046-CTT-C | 13939166-CTT-C | *** | |||||||
3146302-G-A | 3278261-G-A | *** | |||||||
3411718-AAAG-A | 3543677-AAAG-A | *** | |||||||
3854247-C-T | 3986206-C-T | *** | |||||||
4102682-C-T | 4234641-C-T | *** | |||||||
4978571-C-T | 5110530-C-T | *** | |||||||
5816783-T-C | 5948742-T-C | *** | |||||||
8055286-A-T | 8187245-A-T | *** | |||||||
13409325-G-A | 11253649-G-A | *** | |||||||
13977254-G-A | 11856548-G-A | *** | |||||||
18762053-A-G | 16650173-A-G | *** | |||||||
21270855-G-A | 19108969-G-A | *** | |||||||
21443968-T-C | 19282082-T-C | *** | |||||||
21633081-T-C | 19471195-T-C | *** | |||||||
21653082-T-C | 19491196-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.