Mortkowicz
BigY2: 225659MDKA Birth:
PolandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 225659 |
|---|---|---|---|---|---|---|---|
| hg19:Y:9714296-C-T hg38:Y:9876687-C-T | IR3_Prx | A+ | |||||
| hg19:Y:28816532-C-T hg38:Y:26670385-C-T | A* | ||||||
| hg19:Y:28817243-G-T hg38:Y:26671096-G-T | A* | ||||||
| hg19:Y:6326441-G-A hg38:Y:6458400-G-A | IR3_Dst | A* | |||||
| hg19:Y:13687560-A-C hg38:Y:11531884-A-C | DYZ17 | A* | |||||
| hg19:Y:18367956-G-A hg38:Y:16256076-G-A | P6_Prx | A* | |||||
| hg19:Y:19688831-G-A hg38:Y:17576951-G-A | P5_Prx | A* | |||||
| hg19:Y:19732424-C-A hg38:Y:17620544-C-A | P5_Prx | A* | |||||
| hg19:Y:20034577-G-A hg38:Y:17922697-G-A | P5_Prx | A* | |||||
| hg19:Y:20659449-C-G hg38:Y:18497563-C-G | BY37846 | P4_Prx | A* | ||||
| hg19:Y:20754922-G-A hg38:Y:18593036-G-A | P4_Prx | A* | |||||
| hg19:Y:23715304-G-A hg38:Y:21553418-G-A | A* | ||||||
| hg19:Y:24256218-G-A hg38:Y:22110071-G-A | P3_b1 | A* | |||||
| hg19:Y:26017075-T-C hg38:Y:23870928-T-C | P1_Y1 | A* | |||||
| hg19:Y:28817114-G-A hg38:Y:26670967-G-A | A* | ||||||
| hg19:Y:9791753-G-A hg38:Y:9954144-G-A | Y89212 | Y | + | ||||
| hg19:Y:7881097-G-A hg38:Y:8013056-G-A | Y15226 | Y | Y | + | |||
| hg19:Y:13212764-C-A hg38:Y:11057088-C-A | BY209967 | + | |||||
| hg19:Y:2727213-T-C hg38:Y:2859172-T-C | Y | Y | + | ||||
| hg19:Y:6959588-T-G hg38:Y:7091547-T-G | Y | Y | + | ||||
| hg19:Y:7735562-C-T hg38:Y:7867521-C-T | Y | Y | + | ||||
| hg19:Y:8310498-G-A hg38:Y:8442457-G-A | Y | Y | + | ||||
| hg19:Y:8647050-C-T hg38:Y:8779009-C-T | Y | Y | + | ||||
| hg19:Y:9379574-C-A hg38:Y:9541965-C-A | Y | + | |||||
| hg19:Y:9507497-G-C hg38:Y:9669888-G-C | BY160195 | + | |||||
| hg19:Y:13459262-A-G hg38:Y:11303586-A-G | BY45942 | + | |||||
| hg19:Y:14101673-C-A hg38:Y:11980967-C-A | Y | Y | + | ||||
| hg19:Y:15181433-G-A hg38:Y:13069519-G-A | Y | Y | + | ||||
| hg19:Y:15288409-C-T hg38:Y:13176508-C-T | Y | + | |||||
| hg19:Y:15415071-A-G hg38:Y:13303191-A-G | BY159933 | Y | Y | + | |||
| hg19:Y:15483292-A-G hg38:Y:13371412-A-G | BY159918 | Y | Y | + | |||
| hg19:Y:16293384-C-A hg38:Y:14181504-C-A | Y | Y | + | ||||
| hg19:Y:16850977-T-C hg38:Y:14739097-T-C | BY159715 | Y | Y | + | |||
| hg19:Y:16893692-T-G hg38:Y:14781812-T-G | Y | Y | + | ||||
| hg19:Y:16904949-G-A hg38:Y:14793069-G-A | BY159703 | Y | Y | + | |||
| hg19:Y:16957632-A-G hg38:Y:14845752-A-G | Y | Y | + | ||||
| hg19:Y:17882576-A-G hg38:Y:15770696-A-G | BY159524 | Y | Y | + | |||
| hg19:Y:18117402-TA-T hg38:Y:16005522-TA-T | + | ||||||
| hg19:Y:18763149-G-A hg38:Y:16651269-G-A | Y | Y | + | ||||
| hg19:Y:18914834-T-C hg38:Y:16802954-T-C | Y | Y | + | ||||
| hg19:Y:19478155-C-T hg38:Y:17366275-C-T | Y | Y | + | ||||
| hg19:Y:21739940-AAAG-A hg38:Y:19578054-AAAG-A | + | ||||||
| hg19:Y:22053911-C-T hg38:Y:19892025-C-T | Y | Y | + | ||||
| hg19:Y:22256320-A-C hg38:Y:20094434-A-C | BY37903 | DYZ19 | + | ||||
| hg19:Y:22827182-CA-C hg38:Y:20665296-CA-C | 8×A | + | |||||
| hg19:Y:22862660-T-C hg38:Y:20700774-T-C | Y | Y | + | ||||
| hg19:Y:23167731-AT-A hg38:Y:21005845-AT-A | + | ||||||
| hg19:Y:23325710-G-A hg38:Y:21163824-G-A | Y | Y | + | ||||
| hg19:Y:23648021-T-C hg38:Y:21486135-T-C | BY147046 | Y | + | ||||
| hg19:Y:23655302-A-C hg38:Y:21493416-A-C | Y | + | |||||
| hg19:Y:23750687-G-T hg38:Y:21588801-G-T | Y | + | |||||
| hg19:Y:24392568-A-G hg38:Y:22246421-A-G | Y | + | |||||
| hg19:Y:8442571-CTT-C,CT hg38:Y:8574530-CTT-C,CT | 15×T | * | |||||
| hg19:Y:23981833-A-ATGTG hg38:Y:21835686-A-ATGTG | 17×TG | * | |||||
| hg19:Y:13711975-T-C hg38:Y:11556299-T-C | DYZ17 | * | |||||
| hg19:Y:25592855-C-T hg38:Y:23446708-C-T | P1_gr1 | * | |||||
| hg19:Y:7188368-C-A hg38:Y:7320327-C-A | ** | ||||||
| hg19:Y:22475820-T-A hg38:Y:20313934-T-A | BY39770 | BY42454 | DYZ19 | ** | |||
| hg19:Y:15761292-A-AT hg38:Y:13649412-A-AT | 8×T | ** | |||||
| hg19:Y:4841680-G-A hg38:Y:4973639-G-A | Z448 FGC3353 | ** | |||||
| hg19:Y:13712589-G-T hg38:Y:11556913-G-T | DYZ17 | ** | |||||
| hg19:Y:23415304-G-A hg38:Y:21253418-G-A | ** | ||||||
| hg19:Y:19927020-G-T hg38:Y:17815140-G-T | P5_Prx | ** | |||||
| hg19:Y:22443768-G-T hg38:Y:20281882-G-T | BY50644 | DYZ19 | ** | ||||
| hg19:Y:15011301-AAATAAT-A hg38:Y:12899386-AAATAATAAT-A | 15×AAT | ** | |||||
| hg19:Y:17318218-C-A hg38:Y:15206338-C-A | ** | ||||||
| hg19:Y:21946463-GAAAA-G hg38:Y:19784577-GAAAA-G | 15×A | ** | |||||
| hg38:Y:10922295-C-T | FT197483 | ** | |||||
| hg38:Y:10922313-C-A | FT436656 | ** | |||||
| hg38:Y:10759772-T-C | ** | ||||||
| hg38:Y:10938326-A-C | ** | ||||||
| hg38:Y:11030768-A-T | ** | ||||||
| hg38:Y:11030783-A-C | ** | ||||||
| hg38:Y:11030795-T-TCCA | ** | ||||||
| hg38:Y:11030797-T-TTC | ** | ||||||
| hg38:Y:11030803-A-T | ** | ||||||
| hg38:Y:11001593-C-A | ** | ||||||
| hg38:Y:10865432-C-A | ** | ||||||
| hg38:Y:10673939-ATTGC-A | ** | ||||||
| hg19:Y:26991367-G-T hg38:Y:24845220-G-T | P1_r4 | ** | |||||
| hg38:Y:10922321-C-T | ** | ||||||
| hg38:Y:10948468-A-T | ** | ||||||
| hg38:Y:56763553-A-G | ** | ||||||
| hg38:Y:10907776-T-A | ** | ||||||
| hg38:Y:10954323-T-TTACTC | ** | ||||||
| hg38:Y:10967542-C-T | ** | ||||||
| hg19:Y:22164547-C-A hg38:Y:20002661-C-A | 19×A | ** | |||||
| hg38:Y:10925556-A-T | ** | ||||||
| hg38:Y:10925591-CTCTGT-C | ** | ||||||
| hg38:Y:10934785-A-G | ** | ||||||
| hg38:Y:10997759-C-T | ** | ||||||
| hg38:Y:10997776-C-T | ** | ||||||
| hg38:Y:10659983-C-G | ** | ||||||
| hg38:Y:11033707-A-T | ** | ||||||
| hg38:Y:11007328-T-C | ** | ||||||
| hg19:Y:24267225-AC-A hg38:Y:22121078-AC-A | P3_b1 | ** | |||||
| hg38:Y:10967513-C-CAGTTG | ** | ||||||
| hg38:Y:10967518-C-CACTGA | ** | ||||||
| hg38:Y:10967529-A-T | ** | ||||||
| hg38:Y:10967530-T-A | ** | ||||||
| hg38:Y:10967535-T-A | ** | ||||||
| hg38:Y:10967573-C-A | ** | ||||||
| hg19:Y:27266308-G-T hg38:Y:25120161-G-T | P1_g3 | ** | |||||
| hg38:Y:10767893-A-T | ** | ||||||
| hg38:Y:10985668-C-A | ** | ||||||
| hg19:Y:13927506-C-A hg38:Y:11806800-C-A | ** | ||||||
| hg38:Y:10673934-AT-A | ** | ||||||
| hg38:Y:10655890-ATTCTG-A | ** | ||||||
| hg38:Y:10655918-C-T | ** | ||||||
| hg38:Y:10655941-T-G | ** | ||||||
| hg38:Y:10655948-A-C | ** | ||||||
| hg38:Y:10938340-C-A | ** | ||||||
| hg19:Y:13461014-G-C hg38:Y:11305338-G-C | A12992 | ** | |||||
| hg38:Y:10882065-C-T | ** | ||||||
| hg38:Y:10882078-C-CCTGCT | ** | ||||||
| hg38:Y:10882099-C-T | ** | ||||||
| hg38:Y:10787295-C-A | ** | ||||||
| hg19:Y:19552273-C-A hg38:Y:17440393-C-A | ** | ||||||
| hg19:Y:18253458-C-A hg38:Y:16141578-C-A | ** | ||||||
| hg38:Y:11013929-A-ACTCAT | ** | ||||||
| hg38:Y:11013977-G-C | ** | ||||||
| hg19:Y:19547346-T-C hg38:Y:17435466-T-C | ** | ||||||
| hg19:Y:19547409-C-G hg38:Y:17435529-C-G | ** | ||||||
| hg19:Y:13197050-C-A hg38:Y:11041374-C-A | ** | ||||||
| hg38:Y:10808007-A-T | ** | ||||||
| hg38:Y:10808043-A-G | ** | ||||||
| hg38:Y:10994255-C-T | ** | ||||||
| hg38:Y:10994314-C-A | ** | ||||||
| hg19:Y:19547317-A-G hg38:Y:17435437-A-G | ** | ||||||
| hg19:Y:2884227-G-T hg38:Y:3016186-G-T | ** | ||||||
| hg19:Y:7385469-C-A hg38:Y:7517428-C-A | ** | ||||||
| hg38:Y:10835528-A-ATTCTG | ** | ||||||
| hg38:Y:10866048-C-T | FT46931 | ** | |||||
| hg19:Y:16030025-C-A hg38:Y:13918145-C-A | ** | ||||||
| hg38:Y:10759742-T-C | ** | ||||||
| hg38:Y:10764565-C-G | ** | ||||||
| hg38:Y:10892485-T-C | ** | ||||||
| hg38:Y:10997724-C-CAATAT | ** | ||||||
| hg19:Y:24240797-C-T hg38:Y:22094650-C-T | P3_b1 | ** | |||||
| hg19:Y:18628068-C-A hg38:Y:16516188-C-A | ** | ||||||
| hg38:Y:10759971-A-G | ** | ||||||
| hg38:Y:10987341-T-C | ** | ||||||
| hg19:Y:6434629-C-A hg38:Y:6566588-C-A | ** | ||||||
| hg19:Y:8281779-CAAA-C hg38:Y:8413738-CAAA-C | 15×A | ** | |||||
| hg19:Y:24205591-T-A hg38:Y:22059444-T-A | P3_b1 | ** | |||||
| hg38:Y:10688214-G-T | ** | ||||||
| hg38:Y:56763521-G-C | ** | ||||||
| hg19:Y:8658287-C-A hg38:Y:8790246-C-A | ** | ||||||
| hg38:Y:10768629-A-T | ** | ||||||
| hg19:Y:18382641-C-CA hg38:Y:16270761-C-CA | P6_Gap | 10×A | ** | ||||
| hg19:Y:21819029-A-C hg38:Y:19657143-A-C | ** | ||||||
| hg38:Y:10988662-T-A | ** | ||||||
| hg38:Y:10755380-T-A | ** | ||||||
| hg38:Y:10759831-A-AC | ** | ||||||
| hg19:Y:4862672-C-A hg38:Y:4994631-C-A | ** | ||||||
| hg19:Y:15413402-C-A hg38:Y:13301522-C-A | ** | ||||||
| hg38:Y:10767914-T-G | ** | ||||||
| hg38:Y:10878170-C-A | ** | ||||||
| hg19:Y:16462387-C-A hg38:Y:14350507-C-A | ** | ||||||
| hg19:Y:19671037-C-A hg38:Y:17559157-C-A | P5_Prx | ** | |||||
| hg19:Y:16344637-C-A hg38:Y:14232757-C-A | ** | ||||||
| hg19:Y:7579871-G-T hg38:Y:7711830-G-T | ** | ||||||
| hg38:Y:11033716-C-A | ** | ||||||
| hg19:Y:13229569-C-A hg38:Y:11073893-C-A | ** | ||||||
| hg19:Y:3815168-G-T hg38:Y:3947127-G-T | ** | ||||||
| hg19:Y:15106637-C-A hg38:Y:12994725-C-A | ** | ||||||
| hg38:Y:10779100-C-A | ** | ||||||
| hg19:Y:14592153-C-A hg38:Y:12480353-C-A | ** | ||||||
| hg19:Y:14502574-C-A hg38:Y:12390779-C-A | ** | ||||||
| hg38:Y:10655143-C-A | ** | ||||||
| hg19:Y:16015595-C-A hg38:Y:13903715-C-A | ** | ||||||
| hg38:Y:10654877-C-A | ** | ||||||
| hg38:Y:11033841-T-A | ** | ||||||
| hg38:Y:10659978-C-T | ** | ||||||
| hg19:Y:4503100-G-T hg38:Y:4635059-G-T | ** | ||||||
| hg38:Y:11025312-G-A | ** | ||||||
| hg38:Y:10845670-C-T | ** | ||||||
| hg38:Y:10759347-C-G | ** | ||||||
| hg19:Y:13226925-C-A hg38:Y:11071249-C-A | ** | ||||||
| hg38:Y:10796168-G-GTTCCA | ** | ||||||
| hg38:Y:10948481-C-A | ** | ||||||
| hg19:Y:19393081-G-T hg38:Y:17281201-G-T | ** | ||||||
| hg38:Y:10976293-C-A | ** | ||||||
| hg19:Y:22801905-C-A hg38:Y:20640019-C-A | ** | ||||||
| hg38:Y:56763499-A-T | ** | ||||||
| hg19:Y:18632298-C-A hg38:Y:16520418-C-A | ** | ||||||
| hg38:Y:10679451-C-A | ** | ||||||
| hg19:Y:15248943-C-A hg38:Y:13137029-C-A | ** | ||||||
| hg19:Y:6767784-G-GA hg38:Y:6899743-G-GA | 9×A | ** | |||||
| hg19:Y:14557593-T-C hg38:Y:12445794-T-C | Y23454 | ** | |||||
| hg19:Y:5880497-C-A hg38:Y:6012456-C-A | ** | ||||||
| hg19:Y:15468482-T-G hg38:Y:13356602-T-G | ** | ||||||
| hg38:Y:10844162-C-A | ** | ||||||
| hg38:Y:10994244-CCATTG-C | ** | ||||||
| hg19:Y:6780687-C-T hg38:Y:6912646-C-T | ** | ||||||
| hg19:Y:16848620-C-A hg38:Y:14736740-C-A | ** | ||||||
| hg19:Y:19932018-T-TG hg38:Y:17820138-T-TG | P5_Prx | ** | |||||
| hg19:Y:6429579-C-A hg38:Y:6561538-C-A | ** | ||||||
| hg19:Y:14753207-C-A hg38:Y:12641276-C-A | ** | ||||||
| hg19:Y:21340216-C-A hg38:Y:19178330-C-A | ** | ||||||
| hg19:Y:20276624-TAC-T hg38:Y:18114738-TAC-T | P5_Dst | ** | |||||
| hg38:Y:10839083-C-A | ** | ||||||
| hg19:Y:13993490-C-A hg38:Y:11872784-C-A | ** | ||||||
| hg38:Y:56734780-A-G | ** | ||||||
| hg38:Y:10862986-C-A | ** | ||||||
| hg38:Y:10995527-C-A | ** | ||||||
| hg19:Y:19547310-C-T hg38:Y:17435430-C-T | ** | ||||||
| hg38:Y:10833118-TATTCC-T | ** | ||||||
| hg19:Y:8856950-C-A hg38:Y:8988909-C-A | ** | ||||||
| hg38:Y:11033704-G-C | ** | ||||||
| hg19:Y:14308266-C-A hg38:Y:12187560-C-A | ** | ||||||
| hg38:Y:10926716-T-C | ** | ||||||
| hg38:Y:10840444-T-C | ** | ||||||
| hg38:Y:10752428-C-A | ** | ||||||
| hg19:Y:18966104-C-A hg38:Y:16854224-C-A | ** | ||||||
| hg38:Y:10689463-T-C | ** | ||||||
| hg38:Y:10689464-C-T | ** | ||||||
| hg38:Y:10689499-T-C | ** | ||||||
| hg38:Y:10689500-T-G | ** | ||||||
| hg38:Y:10689518-C-A | ** | ||||||
| hg19:Y:28006373-T-TAG hg38:Y:25860226-T-TAG | P1_Y2 | 16×AC | ** | ||||
| hg19:Y:13946824-C-A hg38:Y:11826118-C-A | ** | ||||||
| hg19:Y:3732710-C-A hg38:Y:3864669-C-A | ** | ||||||
| hg38:Y:56685639-T-G | ** | ||||||
| hg19:Y:21556806-C-A hg38:Y:19394920-C-A | ** | ||||||
| hg19:Y:16539802-G-T hg38:Y:14427922-G-T | ** | ||||||
| hg19:Y:14908507-A-T hg38:Y:12796574-A-T | ** | ||||||
| hg38:Y:11007314-C-A | ** | ||||||
| hg19:Y:17475176-C-A hg38:Y:15363296-C-A | ** | ||||||
| hg38:Y:10938329-G-A | ** | ||||||
| hg19:Y:3106693-G-T hg38:Y:3238652-G-T | ** | ||||||
| hg38:Y:10630700-A-T | ** | ||||||
| hg19:Y:14803134-C-A hg38:Y:12691205-C-A | ** | ||||||
| hg19:Y:5283252-G-T hg38:Y:5415211-G-T | ** | ||||||
| hg38:Y:10673497-C-A | ** | ||||||
| hg38:Y:10752018-C-A | ** | ||||||
| hg19:Y:19444278-C-A hg38:Y:17332398-C-A | ** | ||||||
| hg19:Y:3818045-C-A hg38:Y:3950004-C-A | ** | ||||||
| hg19:Y:5872017-C-T hg38:Y:6003976-C-T | ** | ||||||
| hg38:Y:56847340-G-A | ** | ||||||
| hg19:Y:18768281-G-A hg38:Y:16656401-G-A | Y15240 | ** | |||||
| hg38:Y:11033735-G-A | ** | ||||||
| hg19:Y:5200532-T-C hg38:Y:5332491-T-C | ** | ||||||
| hg19:Y:7012270-C-A hg38:Y:7144229-C-A | ** | ||||||
| hg19:Y:25997950-A-C hg38:Y:23851803-A-C | P1_Y1 | ** | |||||
| hg19:Y:6330186-G-T hg38:Y:6462145-G-T | IR3_Dst | ** | |||||
| hg38:Y:10763981-G-C | ** | ||||||
| hg38:Y:56850892-T-C | ** | ||||||
| hg19:Y:8816471-C-A hg38:Y:8948430-C-A | FTB51758 | ** | |||||
| hg19:Y:17735507-C-A hg38:Y:15623627-C-A | ** | ||||||
| hg19:Y:19547417-G-A hg38:Y:17435537-G-A | ** | ||||||
| hg19:Y:17923628-A-AAG hg38:Y:15811748-A-AAG | 8×AG | ** | |||||
| hg38:Y:10868995-G-A | ** | ||||||
| hg19:Y:19056328-C-A hg38:Y:16944448-C-A | ** | ||||||
| hg19:Y:7221387-C-A hg38:Y:7353346-C-A | ** | ||||||
| hg19:Y:15305675-C-A hg38:Y:13193774-C-A | ** | ||||||
| hg38:Y:11007043-CTCCAT-C | ** | ||||||
| hg38:Y:10825261-A-T | ** | ||||||
| hg19:Y:6934673-C-A hg38:Y:7066632-C-A | ** | ||||||
| hg38:Y:56763492-G-C | ** | ||||||
| hg38:Y:56763507-G-A | ** | ||||||
| hg38:Y:56763510-T-A | ** | ||||||
| hg19:Y:15323571-C-A hg38:Y:13211689-C-A | ** | ||||||
| hg38:Y:11663756-G-T | DYZ17 | ** | |||||
| hg19:Y:16933051-C-A hg38:Y:14821171-C-A | ** | ||||||
| hg38:Y:10767918-T-C | ** | ||||||
| hg19:Y:14933665-T-G hg38:Y:12821730-T-G | ** | ||||||
| hg38:Y:10992913-T-C | FT92191 | ** | |||||
| hg19:Y:20509907-A-C hg38:Y:18348021-A-C | P5_Dst | ** | |||||
| hg19:Y:18769446-C-A hg38:Y:16657566-C-A | ** | ||||||
| hg19:Y:21093426-CTAT-C hg38:Y:18931540-CTAT-C | ** | ||||||
| hg19:Y:16295065-C-A hg38:Y:14183185-C-A | ** | ||||||
| hg19:Y:22164533-G-T hg38:Y:20002647-G-T | ** | ||||||
| hg19:Y:4687553-C-A hg38:Y:4819512-C-A | ** | ||||||
| hg19:Y:15468507-A-T hg38:Y:13356627-A-T | ** | ||||||
| hg38:Y:10984370-CTCCAT-C | ** | ||||||
| hg19:Y:2673380-T-C hg38:Y:2805339-T-C | ** | ||||||
| hg19:Y:2683466-C-A hg38:Y:2815425-C-A | ** | ||||||
| hg19:Y:3040876-C-A hg38:Y:3172835-C-A | ** | ||||||
| hg19:Y:3109082-G-T hg38:Y:3241041-G-T | ** | ||||||
| hg19:Y:3116661-G-T hg38:Y:3248620-G-T | ** | ||||||
| hg19:Y:3161200-C-G hg38:Y:3293159-C-G | FGC3351 | ** | |||||
| hg19:Y:3692471-C-A hg38:Y:3824430-C-A | ** | ||||||
| hg19:Y:3702972-C-A hg38:Y:3834931-C-A | ** | ||||||
| hg19:Y:3754523-G-A hg38:Y:3886482-G-A | ** | ||||||
| hg19:Y:3913743-G-A hg38:Y:4045702-G-A | ** | ||||||
| hg19:Y:4129332-G-C hg38:Y:4261291-G-C | ** | ||||||
| hg19:Y:4200718-C-A hg38:Y:4332677-C-A | ** | ||||||
| hg19:Y:4215328-G-T hg38:Y:4347287-G-T | FGC82156 | ** | |||||
| hg19:Y:4321926-C-A hg38:Y:4453885-C-A | ** | ||||||
| hg19:Y:4523851-G-T hg38:Y:4655810-G-T | ** | ||||||
| hg19:Y:4707437-C-A hg38:Y:4839396-C-A | ** | ||||||
| hg19:Y:4772165-C-A hg38:Y:4904124-C-A | ** | ||||||
| hg19:Y:5014126-G-T hg38:Y:5146085-G-T | ** | ||||||
| hg19:Y:5073103-G-T hg38:Y:5205062-G-T | ** | ||||||
| hg19:Y:5164374-G-A hg38:Y:5296333-G-A | ** | ||||||
| hg19:Y:5467853-G-C hg38:Y:5599812-G-C | ** | ||||||
| hg19:Y:5473795-G-T hg38:Y:5605754-G-T | ** | ||||||
| hg19:Y:5845000-C-A hg38:Y:5976959-C-A | ** | ||||||
| hg19:Y:5871995-C-G hg38:Y:6003954-C-G | ** | ||||||
| hg19:Y:6021644-C-A hg38:Y:6153603-C-A | ** | ||||||
| hg19:Y:6029082-C-G hg38:Y:6161041-C-G | ** | ||||||
| hg19:Y:6330222-A-T hg38:Y:6462181-A-T | IR3_Dst | ** | |||||
| hg19:Y:6356053-G-T hg38:Y:6488012-G-T | ** | ||||||
| hg19:Y:6513732-T-TTA hg38:Y:6645691-T-TTA | ** | ||||||
| hg19:Y:6514176-T-G hg38:Y:6646135-T-G | ** | ||||||
| hg19:Y:6623132-G-T hg38:Y:6755091-G-T | ** | ||||||
| hg19:Y:6664652-G-T hg38:Y:6796611-G-T | ** | ||||||
| hg19:Y:6709039-C-A hg38:Y:6840998-C-A | ** | ||||||
| hg19:Y:6934749-T-G hg38:Y:7066708-T-G | ** | ||||||
| hg19:Y:7158123-C-A hg38:Y:7290082-C-A | ** | ||||||
| hg19:Y:7409525-A-G hg38:Y:7541484-A-G | ** | ||||||
| hg19:Y:7868302-A-G hg38:Y:8000261-A-G | ** | ||||||
| hg19:Y:7984447-G-A hg38:Y:8116406-G-A | ** | ||||||
| hg19:Y:8343122-A-G hg38:Y:8475081-A-G | ** | ||||||
| hg19:Y:8692127-C-A hg38:Y:8824086-C-A | ** | ||||||
| hg19:Y:8697482-C-A hg38:Y:8829441-C-A | ** | ||||||
| hg19:Y:8699389-C-A hg38:Y:8831348-C-A | ** | ||||||
| hg19:Y:8761813-G-T hg38:Y:8893772-G-T | ** | ||||||
| hg19:Y:8967664-T-C hg38:Y:9130055-T-C | ** | ||||||
| hg19:Y:9063682-C-A hg38:Y:9226073-C-A | ** | ||||||
| hg19:Y:9377886-A-T hg38:Y:9540277-A-T | ** | ||||||
| hg19:Y:9631459-TAAAAATCC-T hg38:Y:9793850-TAAAAATCC-T | IR3_Prx | ** | |||||
| hg19:Y:9631484-T-G hg38:Y:9793875-T-G | IR3_Prx | ** | |||||
| hg19:Y:9631502-G-T hg38:Y:9793893-G-T | IR3_Prx | ** | |||||
| hg19:Y:9847413-C-A hg38:Y:10009804-C-A | ** | ||||||
| hg19:Y:9990004-C-A hg38:Y:10152395-C-A | ** | ||||||
| hg38:Y:10627723-A-T | ** | ||||||
| hg38:Y:10628506-T-TG | ** | ||||||
| hg38:Y:10645897-A-T | ** | ||||||
| hg38:Y:10664122-T-G | ** | ||||||
| hg38:Y:10669660-C-A | ** | ||||||
| hg38:Y:10691567-C-A | ** | ||||||
| hg38:Y:10759359-A-T | ** | ||||||
| hg38:Y:10767849-T-G | ** | ||||||
| hg38:Y:10767863-C-T | ** | ||||||
| hg38:Y:10767901-C-G | ** | ||||||
| hg38:Y:10767912-A-C | ** | ||||||
| hg38:Y:10775538-T-C | FT91676 | ** | |||||
| hg38:Y:10791456-C-T | ** | ||||||
| hg38:Y:10805785-C-A | FT432018 | ** | |||||
| hg38:Y:10812823-G-A | ** | ||||||
| hg38:Y:10834810-C-A | ** | ||||||
| hg38:Y:10840439-C-T | ** | ||||||
| hg38:Y:10866003-A-G | FT434675 | ** | |||||
| hg38:Y:10882369-C-A | ** | ||||||
| hg38:Y:10899799-G-T | ** | ||||||
| hg38:Y:10943410-C-A | ** | ||||||
| hg38:Y:10947223-C-A | ** | ||||||
| hg38:Y:10948471-T-C | ** | ||||||
| hg38:Y:10948472-A-T | ** | ||||||
| hg38:Y:10955844-G-A | FT92104 | ** | |||||
| hg38:Y:10961170-C-T | ** | ||||||
| hg38:Y:10973279-C-A | ** | ||||||
| hg38:Y:10974874-C-A | ** | ||||||
| hg38:Y:10975119-G-A | ** | ||||||
| hg38:Y:10981237-C-A | ** | ||||||
| hg38:Y:10997400-T-G | ** | ||||||
| hg38:Y:11033722-A-G | ** | ||||||
| hg38:Y:11033727-A-T | ** | ||||||
| hg19:Y:13222620-A-T hg38:Y:11066944-A-T | ** | ||||||
| hg19:Y:13236268-C-CA hg38:Y:11080592-C-CA | 8×A | ** | |||||
| hg19:Y:13255680-T-C hg38:Y:11100004-T-C | FT441909 | ** | |||||
| hg19:Y:13264047-T-A hg38:Y:11108371-T-A | ** | ||||||
| hg19:Y:13466069-C-G hg38:Y:11310393-C-G | ** | ||||||
| hg19:Y:13474068-C-T hg38:Y:11318392-C-T | FT444093 | ** | |||||
| hg19:Y:13609747-G-T hg38:Y:11454071-G-T | ** | ||||||
| hg19:Y:13705526-G-T hg38:Y:11549850-G-T | DYZ17 | ** | |||||
| hg19:Y:13709094-C-T hg38:Y:11553418-C-T | DYZ17 | ** | |||||
| hg19:Y:13712584-C-G hg38:Y:11556908-C-G | DYZ17 | ** | |||||
| hg38:Y:11645996-T-A | FT449898 | DYZ17 | ** | ||||
| hg38:Y:11649930-A-G | DYZ17 | ** | |||||
| hg38:Y:11651525-C-A | FT92534 | DYZ17 | ** | ||||
| hg38:Y:11659816-G-T | DYZ17 | ** | |||||
| hg19:Y:13800773-G-T hg38:Y:11680067-G-T | DYZ17 | ** | |||||
| hg19:Y:13900466-G-T hg38:Y:11779760-G-T | ** | ||||||
| hg19:Y:13919360-T-G hg38:Y:11798654-T-G | ** | ||||||
| hg19:Y:13984075-T-G hg38:Y:11863369-T-G | ** | ||||||
| hg19:Y:14050352-T-G hg38:Y:11929646-T-G | ** | ||||||
| hg19:Y:14146124-G-T hg38:Y:12025418-G-T | ** | ||||||
| hg19:Y:14247482-G-T hg38:Y:12126776-G-T | ** | ||||||
| hg19:Y:14427052-C-A hg38:Y:12306327-C-A | ** | ||||||
| hg19:Y:14712602-G-T hg38:Y:12600669-G-T | ** | ||||||
| hg19:Y:14726380-C-A hg38:Y:12614448-C-A | ** | ||||||
| hg19:Y:14807323-G-A hg38:Y:12695394-G-A | ** | ||||||
| hg19:Y:14959623-A-G hg38:Y:12847698-A-G | ** | ||||||
| hg19:Y:15309773-A-AC hg38:Y:13197878-A-AC | ** | ||||||
| hg19:Y:15468501-AC-A hg38:Y:13356621-AC-A | ** | ||||||
| hg19:Y:15498801-T-G hg38:Y:13386921-T-G | ** | ||||||
| hg19:Y:15498803-T-G hg38:Y:13386923-T-G | ** | ||||||
| hg19:Y:15842612-G-T hg38:Y:13730732-G-T | ** | ||||||
| hg19:Y:16220868-A-C hg38:Y:14108988-A-C | ** | ||||||
| hg19:Y:16692117-CAAAAAAA-C hg38:Y:14580237-CAAAAAAA-C | 28×A | ** | |||||
| hg19:Y:16727149-G-T hg38:Y:14615269-G-T | ** | ||||||
| hg19:Y:16942076-C-A hg38:Y:14830196-C-A | ** | ||||||
| hg19:Y:16999565-T-A hg38:Y:14887685-T-A | ** | ||||||
| hg19:Y:17122546-T-C hg38:Y:15010666-T-C | ** | ||||||
| hg19:Y:17232561-G-A hg38:Y:15120681-G-A | ** | ||||||
| hg19:Y:17374289-G-T hg38:Y:15262409-G-T | ** | ||||||
| hg19:Y:17545814-T-C hg38:Y:15433934-T-C | ** | ||||||
| hg19:Y:17628400-A-T hg38:Y:15516520-A-T | ** | ||||||
| hg19:Y:17646889-A-G hg38:Y:15535009-A-G | FTB52757 | ** | |||||
| hg19:Y:18270272-A-C hg38:Y:16158392-A-C | ** | ||||||
| hg19:Y:18361518-G-T hg38:Y:16249638-G-T | P6_Prx | ** | |||||
| hg19:Y:18382070-A-C hg38:Y:16270190-A-C | P6_Gap | ** | |||||
| hg19:Y:18519289-G-T hg38:Y:16407409-G-T | P6_Dst | ** | |||||
| hg19:Y:18661626-G-T hg38:Y:16549746-G-T | ** | ||||||
| hg19:Y:18702250-G-T hg38:Y:16590370-G-T | ** | ||||||
| hg19:Y:18794958-C-A hg38:Y:16683078-C-A | ** | ||||||
| hg19:Y:18930433-C-A hg38:Y:16818553-C-A | ** | ||||||
| hg19:Y:19223041-A-C hg38:Y:17111161-A-C | ** | ||||||
| hg19:Y:19311092-T-G hg38:Y:17199212-T-G | ** | ||||||
| hg19:Y:19429450-TG-T hg38:Y:17317570-TG-T | ** | ||||||
| hg19:Y:19459331-G-T hg38:Y:17347451-G-T | ** | ||||||
| hg19:Y:19547305-T-C hg38:Y:17435425-T-C | ** | ||||||
| hg19:Y:19547328-C-T hg38:Y:17435448-C-T | ** | ||||||
| hg19:Y:19547351-G-T hg38:Y:17435471-G-T | ** | ||||||
| hg19:Y:19547354-T-C hg38:Y:17435474-T-C | ** | ||||||
| hg19:Y:19547380-G-A hg38:Y:17435500-G-A | ** | ||||||
| hg19:Y:19547399-A-C hg38:Y:17435519-A-C | ** | ||||||
| hg19:Y:19547402-C-G hg38:Y:17435522-C-G | ** | ||||||
| hg19:Y:19621453-G-C hg38:Y:17509573-G-C | P5_Prx | ** | |||||
| hg19:Y:20341880-A-C hg38:Y:18179994-A-C | P5_Dst | ** | |||||
| hg19:Y:20341883-CTAAATTTTCTAA-C hg38:Y:18179997-CTAAATTTTCTAA-C | P5_Dst | ** | |||||
| hg19:Y:20473317-G-T hg38:Y:18311431-G-T | P5_Dst | ** | |||||
| hg19:Y:20646692-G-T hg38:Y:18484806-G-T | P4_Prx | ** | |||||
| hg19:Y:20646753-A-T hg38:Y:18484867-A-T | P4_Prx | ** | |||||
| hg19:Y:20654981-AATATATATAT-A hg38:Y:18493095-AATATATATAT-A | P4_Prx | 21×AT | ** | ||||
| hg19:Y:20870507-T-G hg38:Y:18708621-T-G | P4_Dst | ** | |||||
| hg19:Y:20870500-GTTTATTT-G hg38:Y:18708614-GTTTATTT-G | P4_Dst | ** | |||||
| hg19:Y:21029292-C-T hg38:Y:18867406-C-T | P4_Dst | ** | |||||
| hg19:Y:21029293-A-G hg38:Y:18867407-A-G | P4_Dst | ** | |||||
| hg19:Y:21029299-C-T hg38:Y:18867413-C-T | P4_Dst | ** | |||||
| hg19:Y:21043012-G-T hg38:Y:18881126-G-T | ** | ||||||
| hg19:Y:21153425-G-T hg38:Y:18991539-G-T | ** | ||||||
| hg19:Y:21172178-GA-G hg38:Y:19010292-GA-G | 8×A | ** | |||||
| hg19:Y:21308163-G-A hg38:Y:19146277-G-A | ** | ||||||
| hg19:Y:21308789-C-A hg38:Y:19146903-C-A | ** | ||||||
| hg19:Y:21489074-G-T hg38:Y:19327188-G-T | ** | ||||||
| hg19:Y:21491178-G-T hg38:Y:19329292-G-T | ** | ||||||
| hg19:Y:21493493-A-T hg38:Y:19331607-A-T | ** | ||||||
| hg19:Y:21494242-G-C hg38:Y:19332356-G-C | ** | ||||||
| hg19:Y:21583339-G-A hg38:Y:19421453-G-A | ** | ||||||
| hg19:Y:21625311-A-C hg38:Y:19463425-A-C | ** | ||||||
| hg19:Y:21961541-G-T hg38:Y:19799655-G-T | ** | ||||||
| hg19:Y:22274972-G-A hg38:Y:20113086-G-A | DYZ19 | ** | |||||
| hg19:Y:22319272-T-G hg38:Y:20157386-T-G | DYZ19 | ** | |||||
| hg19:Y:22428278-A-G hg38:Y:20266392-A-G | DYZ19 | ** | |||||
| hg19:Y:22428283-T-C hg38:Y:20266397-T-C | DYZ19 | ** | |||||
| hg19:Y:22437873-T-A hg38:Y:20275987-T-A | DYZ19 | ** | |||||
| hg19:Y:22443750-C-T hg38:Y:20281864-C-T | DYZ19 | ** | |||||
| hg19:Y:22460855-G-T hg38:Y:20298969-G-T | DYZ19 | ** | |||||
| hg19:Y:22487117-T-G hg38:Y:20325231-T-G | BY224897 | DYZ19 | ** | ||||
| hg19:Y:22537737-TTAATA-T hg38:Y:20375851-TTAATA-T | ** | ||||||
| hg19:Y:22714264-T-A hg38:Y:20552378-T-A | ** | ||||||
| hg19:Y:23184973-A-G hg38:Y:21023087-A-G | ** | ||||||
| hg19:Y:23321589-T-G hg38:Y:21159703-T-G | ** | ||||||
| hg19:Y:23386254-C-A hg38:Y:21224368-C-A | ** | ||||||
| hg19:Y:23460561-C-A hg38:Y:21298675-C-A | ** | ||||||
| hg19:Y:23579364-G-A hg38:Y:21417478-G-A | ** | ||||||
| hg38:Y:21751813-C-T | ** | ||||||
| hg19:Y:24407170-G-T hg38:Y:22261023-G-T | ** | ||||||
| hg19:Y:24600440-TTCTCTTTC-T hg38:Y:22454293-TTCTCTTTC-T | P3_t2 | ** | |||||
| hg19:Y:25956891-A-C hg38:Y:23810744-A-C | P1_Y1 | ** | |||||
| hg19:Y:27791888-C-A hg38:Y:25645741-C-A | P1_Y2 | ** | |||||
| hg19:Y:27971611-G-T hg38:Y:25825464-G-T | P1_Y2 | ** | |||||
| hg19:Y:28370054-G-A hg38:Y:26223907-G-A | FT461359 | P1_gr2 | ** | ||||
| hg19:Y:28515447-C-T hg38:Y:26369300-C-T | ** | ||||||
| hg19:Y:28555295-C-A hg38:Y:26409148-C-A | ** | ||||||
| hg19:Y:28555622-G-A hg38:Y:26409475-G-A | ** | ||||||
| hg19:Y:28656881-T-G hg38:Y:26510734-T-G | ** | ||||||
| hg19:Y:28657570-G-A hg38:Y:26511423-G-A | ** | ||||||
| hg19:Y:28718169-C-A hg38:Y:26572022-C-A | ** | ||||||
| hg38:Y:56734769-A-G | ** | ||||||
| hg38:Y:56872370-G-T | ** | ||||||
| hg38:Y:56883985-C-A | ** | ||||||
| hg38:Y2:29718-T-A | ** | ||||||
| hg38:Y2:29720-C-T | ** | ||||||
| hg19:Y:14538542-CTTTA-C hg38:Y:12426743-CTTTA-C | 5×TTTA | *** | |||||
| hg38:Y:10899064-C-A | *** | ||||||
| hg38:Y:10899068-T-A | *** | ||||||
| hg38:Y:10899082-CTCCAT-C | *** | ||||||
| hg38:Y:11003743-C-G | *** | ||||||
| hg38:Y:10987222-C-G,T | *** | ||||||
| hg19:Y:17637638-AACACAC-A,AAC hg38:Y:15525758-AACACAC-A,AAC | 21×AC | *** | |||||
| hg19:Y:13521039-GAT-G,GATAT hg38:Y:11365363-GAT-G,GATAT | 10×AT | *** | |||||
| hg38:Y:11003759-A-T | *** | ||||||
| hg38:Y:10884700-C-A | *** | ||||||
| hg38:Y:56826694-TTTGCATCCATTCAA-T,TTCCAGTCCATTCTA | *** | ||||||
| hg19:Y:13704344-GAATGGAATGA-G hg38:Y:11548668-GAATGGAATGA-G | DYZ17 | *** | |||||
| hg38:Y:10664809-C-CCTTGT | *** | ||||||
| hg19:Y:7409901-TAA-T,TA hg38:Y:7541860-TAA-T,TA | 19×A | *** | |||||
| hg38:Y:10663673-G-A,T | *** | ||||||
| hg19:Y:16271842-C-A hg38:Y:14159962-C-A | *** | ||||||
| hg19:Y:6359640-TAA-T,TAAA hg38:Y:6491599-TAA-T,TAAA | 22×A | *** | |||||
| hg38:Y:10782726-C-A | *** | ||||||
| hg19:Y:24124499-C-A hg38:Y:21978352-C-A | P3_b1 | *** | |||||
| hg19:Y:9798063-GTTTT-G,GTTT hg38:Y:9960454-GTTTT-G,GTTT | 17×T | *** | |||||
| hg38:Y:10970809-C-A | *** | ||||||
| hg19:Y:15401997-C-A hg38:Y:13290117-C-A | *** | ||||||
| hg19:Y:13291788-C-A hg38:Y:11136112-C-A | *** | ||||||
| hg19:Y:8351412-C-A hg38:Y:8483371-C-A | *** | ||||||
| hg19:Y:7981639-C-A hg38:Y:8113598-C-A | *** | ||||||
| hg19:Y:13489335-A-T hg38:Y:11333659-A-T | *** | ||||||
| hg19:Y:18570027-C-A hg38:Y:16458147-C-A | *** | ||||||
| hg19:Y:28765548-C-CAA hg38:Y:26619401-C-CAA | 12×A | *** | |||||
| hg38:Y:11027251-C-A | *** | ||||||
| hg19:Y:3999624-C-A hg38:Y:4131583-C-A | *** | ||||||
| hg19:Y:5845694-G-T hg38:Y:5977653-G-T | *** | ||||||
| hg19:Y:7434908-C-A hg38:Y:7566867-C-A | *** | ||||||
| hg19:Y:8428944-CAAA-C,CAA hg38:Y:8560903-CAAA-C,CAA | 25×A | *** | |||||
| hg38:Y:10819403-C-A | *** | ||||||
| hg38:Y:10899067-T-C,G | *** | ||||||
| hg38:Y:10936256-C-A | FT92052 | *** | |||||
| hg38:Y:10960067-C-A | *** | ||||||
| hg19:Y:13455076-ATTCCATTCCATTCCATTCCATTCCATTCCACCCTGTTTGTTTCCT-A,ATTCCATTCCATTCCATTCCATTCCATTCCATTCCA hg38:Y:11299400-ATTCCATTCCATTCCATTCCATTCCATTCCACCCTGTTTGTTTCCT-A,ATTCCATTCCATTCCATTCCATTCCATTCCATTCCA | *** | ||||||
| hg19:Y:13706081-ATGGTATGGCG-A,ATGTATGGCG hg38:Y:11550405-ATGGTATGGCG-A,ATGTATGGCG | DYZ17 | *** | |||||
| hg19:Y:13862133-A-G hg38:Y:11741427-A-G | DYZ17 | *** | |||||
| hg19:Y:14918168-T-C hg38:Y:12806235-T-C | *** | ||||||
| hg19:Y:15347134-G-A hg38:Y:13235253-G-A | *** | ||||||
| hg19:Y:17192866-G-GT hg38:Y:15080986-G-GT | *** | ||||||
| hg19:Y:18188551-A-C hg38:Y:16076671-A-C | *** | ||||||
| hg19:Y:18737368-TG-T hg38:Y:16625488-TG-T | *** | ||||||
| hg19:Y:19166009-A-G hg38:Y:17054129-A-G | *** | ||||||
| hg19:Y:20778709-C-A hg38:Y:18616823-C-A | P4_Prx | *** | |||||
| hg19:Y:20984729-G-C hg38:Y:18822843-G-C | P4_Dst | *** | |||||
| hg19:Y:22166300-C-A hg38:Y:20004414-C-A | *** | ||||||
| hg19:Y:22181025-T-C hg38:Y:20019139-T-C | *** | ||||||
| hg19:Y:22238017-G-A hg38:Y:20076131-G-A | DYZ19 | *** | |||||
| hg19:Y:22476143-G-A hg38:Y:20314257-G-A | DYZ19 | *** | |||||
| hg19:Y:22507747-T-G hg38:Y:20345861-T-G | BY49553 | DYZ19 | *** | ||||
| hg19:Y:23856895-GAA-G hg38:Y:21695009-GAA-G | 10×A | *** | |||||
| hg19:Y:26084859-C-A hg38:Y:23938712-C-A | P1_Y1 | *** | |||||
| hg19:Y:27958530-T-C hg38:Y:25812383-T-C | P1_Y2 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 225659 | 9370406 | 7689916 | 7600276 |
| Used in age calculations | 9370406 | 7689916 | 7600276 |
| Counts of SNPs | 27 | 24 |
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