Skjoldal
BigY2: 649953MDKA Birth:
DenmarkTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 649953 |
|---|---|---|---|---|---|---|---|
| hg19:Y:19707674-G-C hg38:Y:17595794-G-C | P5_Prx | A* | |||||
| hg19:Y:22289577-T-A hg38:Y:20127691-T-A | DYZ19 | A* | |||||
| hg19:Y:28792201-C-T hg38:Y:26646054-C-T | A* | ||||||
| hg19:Y:13452359-T-G hg38:Y:11296683-T-G | A* | ||||||
| hg19:Y:13452362-C-A hg38:Y:11296686-C-A | A* | ||||||
| hg19:Y:13448685-A-T hg38:Y:11293009-A-T | A* | ||||||
| hg19:Y:28807382-A-G hg38:Y:26661235-A-G | A* | ||||||
| hg19:Y:24267992-T-A hg38:Y:22121845-T-A | P3_b1 | A* | |||||
| hg19:Y:28807368-C-G hg38:Y:26661221-C-G | A* | ||||||
| hg19:Y:22466030-A-G hg38:Y:20304144-A-G | A6484 | BY46147 | DYZ19 | + | |||
| hg19:Y:9384869-T-C hg38:Y:9547260-T-C | BY79036 | Y | + | ||||
| hg19:Y:9384870-G-C hg38:Y:9547261-G-C | BY79037 | Y | + | ||||
| hg19:Y:14520922-C-T hg38:Y:12409123-C-T | BY96284 | Y | Y | + | |||
| hg19:Y:14572805-G-T hg38:Y:12461005-G-T | BY96527 | Y | Y | + | |||
| hg19:Y:15260402-C-T hg38:Y:13148486-C-T | BY100501 | Y | Y | + | |||
| hg19:Y:16170670-C-T hg38:Y:14058790-C-T | BY211630 | Y | + | ||||
| hg19:Y:17010851-G-C hg38:Y:14898971-G-C | BY111713 | Y | Y | + | |||
| hg19:Y:18778179-C-T hg38:Y:16666299-C-T | BY123832 | Y | Y | + | |||
| hg19:Y:21945717-A-G hg38:Y:19783831-A-G | BY136598 | Y | Y | + | |||
| hg19:Y:22200573-A-T hg38:Y:20038687-A-T | BY138400 | Y | Y | + | |||
| hg19:Y:22801993-C-T hg38:Y:20640107-C-T | BY140851 | Y | Y | + | |||
| hg19:Y:23141716-C-A hg38:Y:20979830-C-A | BY143315 | Y | Y | + | |||
| hg19:Y:23336339-A-G hg38:Y:21174453-A-G | BY144676 | Y | Y | + | |||
| hg19:Y:22231287-G-A hg38:Y:20069401-G-A | DYZ19 | * | |||||
| hg19:Y:9810794-C-. hg38:Y:9973185-C-. | Z367 S255 | ** | |||||
| hg19:Y:21069792-C-A hg38:Y:18907906-C-A | ** | ||||||
| hg19:Y:14038103-C-A hg38:Y:11917397-C-A | ** | ||||||
| hg19:Y:3990395-G-A hg38:Y:4122354-G-A | FT319158 | ** | |||||
| hg19:Y:14736564-C-A hg38:Y:12624632-C-A | ** | ||||||
| hg19:Y:18853395-G-A hg38:Y:16741515-G-A | M6438 | ** | |||||
| hg19:Y:21095801-A-T hg38:Y:18933915-A-T | Y10396 Z23003 | ** | |||||
| hg19:Y:26205963-A-G hg38:Y:24059816-A-G | Z23051 | P1_Y1 | ** | ||||
| hg19:Y:28772907-C-T hg38:Y:26626760-C-T | FGC6806 | Y10981 FGC6813 | ** | ||||
| hg19:Y:19189592-C-T hg38:Y:17077712-C-T | ** | ||||||
| hg19:Y:19125591-G-A hg38:Y:17013711-G-A | ** | ||||||
| hg19:Y:16583309-C-T hg38:Y:14471429-C-T | AMM154 AM00344 | ** | |||||
| hg19:Y:27889362-A-C hg38:Y:25743215-A-C | P1_Y2 | ** | |||||
| hg19:Y:26421464-T-G hg38:Y:24275317-T-G | P1_Y1 | ** | |||||
| hg19:Y:10045425-C-A hg38:Y:10207816-C-A | ** | ||||||
| hg19:Y:13236660-C-A hg38:Y:11080984-C-A | ** | ||||||
| hg19:Y:9596500-TG-T hg38:Y:9758891-TG-T | IR3_Prx | ** | |||||
| hg19:Y:18743325-C-A hg38:Y:16631445-C-A | ** | ||||||
| hg38:Y:10834868-C-G | ** | ||||||
| hg38:Y:10834873-T-C | ** | ||||||
| hg38:Y:10834883-T-A | ** | ||||||
| hg38:Y:10834886-C-T | ** | ||||||
| hg38:Y:10834890-C-T | ** | ||||||
| hg19:Y:18546941-C-A hg38:Y:16435061-C-A | ** | ||||||
| hg38:Y:11008778-C-A | ** | ||||||
| hg38:Y:11032298-C-A | ** | ||||||
| hg19:Y:9571870-GT-G hg38:Y:9734261-GT-G | IR3_Prx | ** | |||||
| hg19:Y:8694195-C-A hg38:Y:8826154-C-A | ** | ||||||
| hg38:Y:10766516-C-G | ** | ||||||
| hg38:Y:10766518-A-C | ** | ||||||
| hg38:Y:10766538-A-T | ** | ||||||
| hg38:Y:10784371-C-A | ** | ||||||
| hg38:Y:10834844-T-A | ** | ||||||
| hg38:Y:10834901-A-C | ** | ||||||
| hg38:Y:10834912-A-G | FT344828 | ** | |||||
| hg38:Y:10834913-TTGGAC-T | ** | ||||||
| hg38:Y:10834929-G-T | ** | ||||||
| hg38:Y:10834931-CA-C | ** | ||||||
| hg19:Y:14424932-C-A hg38:Y:12304207-C-A | ** | ||||||
| hg19:Y:14424906-C-A hg38:Y:12304181-C-A | ** | ||||||
| hg38:Y:10761025-T-C | ** | ||||||
| hg38:Y:10789686-C-A | FT431277 | ** | |||||
| hg19:Y:17739889-G-A hg38:Y:15628009-G-A | ** | ||||||
| hg38:Y:10771996-A-C | ** | ||||||
| hg19:Y:14698507-C-A hg38:Y:12586573-C-A | ** | ||||||
| hg38:Y:10756338-A-T | ** | ||||||
| hg19:Y:14421145-G-T hg38:Y:12300420-G-T | ** | ||||||
| hg19:Y:9731615-TG-T hg38:Y:9894006-TG-T | IR3_Prx | ** | |||||
| hg19:Y:28627209-C-A hg38:Y:26481062-C-A | ** | ||||||
| hg19:Y:19125506-T-C hg38:Y:17013626-T-C | ** | ||||||
| hg19:Y:19125511-C-T hg38:Y:17013631-C-T | ** | ||||||
| hg19:Y:6954865-C-A hg38:Y:7086824-C-A | ** | ||||||
| hg19:Y:16033603-C-A hg38:Y:13921723-C-A | ** | ||||||
| hg38:Y:56838993-C-T | ** | ||||||
| hg19:Y:9535174-G-GT hg38:Y:9697565-G-GT | IR3_Prx | ** | |||||
| hg38:Y:10771993-C-T | ** | ||||||
| hg38:Y:10772003-C-T | ** | ||||||
| hg38:Y:10772024-G-T | ** | ||||||
| hg19:Y:17702486-G-A hg38:Y:15590606-G-A | ** | ||||||
| hg38:Y:10660102-C-A | ** | ||||||
| hg38:Y:10861849-C-T | ** | ||||||
| hg19:Y:22893411-C-G hg38:Y:20731525-C-G | ** | ||||||
| hg19:Y:22893413-C-G hg38:Y:20731527-C-G | ** | ||||||
| hg19:Y:19125631-C-G hg38:Y:17013751-C-G | ** | ||||||
| hg19:Y:28811865-G-T hg38:Y:26665718-G-T | ** | ||||||
| hg38:Y:10859707-T-C | ** | ||||||
| hg19:Y:28438247-C-A hg38:Y:26292100-C-A | P1_gr2 | ** | |||||
| hg19:Y:26421466-G-T hg38:Y:24275319-G-T | P1_Y1 | ** | |||||
| hg19:Y:16868598-C-A hg38:Y:14756718-C-A | ** | ||||||
| hg38:Y:11037100-C-A | ** | ||||||
| hg38:Y:11037130-C-A | ** | ||||||
| hg19:Y:24624537-GT-G hg38:Y:22478390-GT-G | P3_t2 | ** | |||||
| hg19:Y:9511952-C-A hg38:Y:9674343-C-A | ** | ||||||
| hg38:Y:10923778-C-A | ** | ||||||
| hg19:Y:5235942-C-A hg38:Y:5367901-C-A | ** | ||||||
| hg38:Y:10803922-C-A | ** | ||||||
| hg38:Y:10824800-T-C | ** | ||||||
| hg38:Y:10824807-A-T | ** | ||||||
| hg38:Y:10824813-A-T | ** | ||||||
| hg38:Y:10824818-C-T | ** | ||||||
| hg38:Y:10824825-T-A | ** | ||||||
| hg19:Y:15565939-CAAAA-C hg38:Y:13454059-CAAAA-C | 16×A | ** | |||||
| hg19:Y:17633686-CAAAAA-C hg38:Y:15521806-CAAAAA-C | 17×A | ** | |||||
| hg38:Y:10773199-C-A | ** | ||||||
| hg19:Y:6359714-G-T hg38:Y:6491673-G-T | ** | ||||||
| hg38:Y:11030759-T-C | ** | ||||||
| hg19:Y:14452784-A-C hg38:Y:12332057-A-C | ** | ||||||
| hg19:Y:21187315-C-A hg38:Y:19025429-C-A | ** | ||||||
| hg19:Y:16277935-C-A hg38:Y:14166055-C-A | ** | ||||||
| hg19:Y:16847575-C-A hg38:Y:14735695-C-A | ** | ||||||
| hg19:Y:26275932-G-T hg38:Y:24129785-G-T | P1_Y1 | ** | |||||
| hg19:Y:21614799-C-A hg38:Y:19452913-C-A | ** | ||||||
| hg19:Y:21262279-C-A hg38:Y:19100393-C-A | ** | ||||||
| hg19:Y:22824914-C-A hg38:Y:20663028-C-A | ** | ||||||
| hg38:Y:10660001-T-C | ** | ||||||
| hg19:Y:16033594-C-A hg38:Y:13921714-C-A | ** | ||||||
| hg38:Y:10819066-G-C | ** | ||||||
| hg38:Y:10939486-G-T | ** | ||||||
| hg19:Y:19189551-C-G hg38:Y:17077671-C-G | ** | ||||||
| hg19:Y:22874563-TA-T hg38:Y:20712677-TA-T | 8×A | ** | |||||
| hg38:Y:10972976-C-A | ** | ||||||
| hg19:Y:19125609-G-C hg38:Y:17013729-G-C | ** | ||||||
| hg19:Y:19125612-G-T hg38:Y:17013732-G-T | ** | ||||||
| hg38:Y:10983783-C-A | ** | ||||||
| hg19:Y:3728662-G-T hg38:Y:3860621-G-T | ** | ||||||
| hg19:Y:4326583-C-A hg38:Y:4458542-C-A | ** | ||||||
| hg19:Y:8913101-C-A hg38:Y:9045060-C-A | ** | ||||||
| hg19:Y:13859599-C-A hg38:Y:11738893-C-A | DYZ17 | ** | |||||
| hg19:Y:20910068-GAATAT-G hg38:Y:18748182-GAATAT-G | P4_Dst | ** | |||||
| hg19:Y:14815898-C-A hg38:Y:12703969-C-A | ** | ||||||
| hg19:Y:20839465-C-A hg38:Y:18677579-C-A | P4_Gap | ** | |||||
| hg19:Y:7172608-C-A hg38:Y:7304567-C-A | FT40337 | ** | |||||
| hg38:Y:10935366-G-T | ** | ||||||
| hg38:Y:56728143-G-A | ** | ||||||
| hg38:Y:10836642-T-TC | ** | ||||||
| hg19:Y:18340490-AC-A hg38:Y:16228610-AC-A | P6_Prx | ** | |||||
| hg38:Y:10961235-C-G | ** | ||||||
| hg19:Y:16717311-C-A hg38:Y:14605431-C-A | ** | ||||||
| hg19:Y:19125619-C-T hg38:Y:17013739-C-T | Z34464 | ** | |||||
| hg19:Y:14441996-C-A hg38:Y:12321269-C-A | ** | ||||||
| hg19:Y:20473627-ATG-A hg38:Y:18311741-ATG-A | P5_Dst | ** | |||||
| hg19:Y:2812774-A-T hg38:Y:2944733-A-T | ** | ||||||
| hg19:Y:22078265-C-A hg38:Y:19916379-C-A | ** | ||||||
| hg19:Y:15498090-C-T hg38:Y:13386210-C-T | ** | ||||||
| hg38:Y:10993253-T-C | ** | ||||||
| hg19:Y:25870900-TG-T hg38:Y:23724753-TG-T | P1_Y1 | ** | |||||
| hg38:Y:56838348-C-A | ** | ||||||
| hg19:Y:5384801-C-A hg38:Y:5516760-C-A | ** | ||||||
| hg19:Y:25994233-T-G hg38:Y:23848086-T-G | P1_Y1 | ** | |||||
| hg19:Y:27963480-C-CAA hg38:Y:25817333-C-CAA | P1_Y2 | 11×A | ** | ||||
| hg38:Y:11020861-A-T | ** | ||||||
| hg19:Y:9964204-C-A hg38:Y:10126595-C-A | ** | ||||||
| hg19:Y:28715931-A-C hg38:Y:26569784-A-C | S2555 | S2617 | ** | ||||
| hg19:Y:16488084-C-A hg38:Y:14376204-C-A | ** | ||||||
| hg19:Y:19125551-C-T hg38:Y:17013671-C-T | ** | ||||||
| hg19:Y:19125556-A-G hg38:Y:17013676-A-G | ** | ||||||
| hg19:Y:19125561-A-G hg38:Y:17013681-A-G | ** | ||||||
| hg19:Y:19125567-C-T hg38:Y:17013687-C-T | ** | ||||||
| hg38:Y:11004902-G-T | ** | ||||||
| hg38:Y:10983798-C-A | ** | ||||||
| hg19:Y:21235182-C-A hg38:Y:19073296-C-A | ** | ||||||
| hg38:Y:10757542-C-A | ** | ||||||
| hg38:Y:10762412-C-A | ** | ||||||
| hg19:Y:14051934-C-A hg38:Y:11931228-C-A | ** | ||||||
| hg38:Y:10967305-C-A | ** | ||||||
| hg19:Y:16860768-AAAAAAG-A hg38:Y:14748888-AAAAAAG-A | ** | ||||||
| hg19:Y:16426815-G-A hg38:Y:14314935-G-A | ** | ||||||
| hg19:Y:7590785-C-A hg38:Y:7722744-C-A | ** | ||||||
| hg38:Y:10792429-T-TGCAC | ** | ||||||
| hg19:Y:28544333-C-A hg38:Y:26398186-C-A | ** | ||||||
| hg19:Y:10022201-T-C hg38:Y:10184592-T-C | ** | ||||||
| hg19:Y:18743299-C-A hg38:Y:16631419-C-A | ** | ||||||
| hg38:Y:12308672-GACAAATTTTATATATATATATATATATAT-G | ** | ||||||
| hg19:Y:3279698-A-AAAATAAAT hg38:Y:3411657-A-AAAATAAAT | 9×AAAT | ** | |||||
| hg19:Y:17085914-C-A hg38:Y:14974034-C-A | ** | ||||||
| hg38:Y:11003116-G-T | ** | ||||||
| hg38:Y:11666208-G-T | DYZ17 | ** | |||||
| hg19:Y:15498147-AT-A hg38:Y:13386267-AT-A | ** | ||||||
| hg19:Y:13461747-C-A hg38:Y:11306071-C-A | ** | ||||||
| hg19:Y:5709980-A-G hg38:Y:5841939-A-G | ** | ||||||
| hg19:Y:2803609-C-A hg38:Y:2935568-C-A | ** | ||||||
| hg19:Y:3032200-T-C hg38:Y:3164159-T-C | ** | ||||||
| hg19:Y:3156680-G-T hg38:Y:3288639-G-T | ** | ||||||
| hg19:Y:3223002-G-T hg38:Y:3354961-G-T | ** | ||||||
| hg19:Y:3223094-G-T hg38:Y:3355053-G-T | ** | ||||||
| hg19:Y:3251851-A-T hg38:Y:3383810-A-T | ** | ||||||
| hg19:Y:3251852-C-G hg38:Y:3383811-C-G | ** | ||||||
| hg19:Y:3251853-A-T hg38:Y:3383812-A-T | ** | ||||||
| hg19:Y:3327021-G-T hg38:Y:3458980-G-T | ** | ||||||
| hg19:Y:3391529-C-T hg38:Y:3523488-C-T | ** | ||||||
| hg19:Y:3452280-C-T hg38:Y:3584239-C-T | FT27630 | ** | |||||
| hg19:Y:3591819-G-A hg38:Y:3723778-G-A | ** | ||||||
| hg19:Y:3600576-C-A hg38:Y:3732535-C-A | ** | ||||||
| hg19:Y:3684195-G-T hg38:Y:3816154-G-T | FTB13963 | ** | |||||
| hg19:Y:3910541-GA-G hg38:Y:4042500-GA-G | ** | ||||||
| hg19:Y:3919129-T-C hg38:Y:4051088-T-C | ** | ||||||
| hg19:Y:4154899-A-C hg38:Y:4286858-A-C | ** | ||||||
| hg19:Y:4215801-C-A hg38:Y:4347760-C-A | ** | ||||||
| hg19:Y:4257816-G-T hg38:Y:4389775-G-T | FGC18700 | ** | |||||
| hg19:Y:4301562-G-T hg38:Y:4433521-G-T | ** | ||||||
| hg19:Y:4394493-C-A hg38:Y:4526452-C-A | ** | ||||||
| hg19:Y:4471778-A-C hg38:Y:4603737-A-C | ** | ||||||
| hg19:Y:4471913-C-A hg38:Y:4603872-C-A | ** | ||||||
| hg19:Y:4521340-C-A hg38:Y:4653299-C-A | ** | ||||||
| hg19:Y:4557017-G-T hg38:Y:4688976-G-T | ** | ||||||
| hg19:Y:4722379-C-A hg38:Y:4854338-C-A | ** | ||||||
| hg19:Y:4908062-G-T hg38:Y:5040021-G-T | ** | ||||||
| hg19:Y:4964479-CGTGTGT-C hg38:Y:5096438-CGTGTGT-C | 19×GT | ** | |||||
| hg19:Y:4965647-C-A hg38:Y:5097606-C-A | ** | ||||||
| hg19:Y:5073395-C-A hg38:Y:5205354-C-A | ** | ||||||
| hg19:Y:5110449-C-A hg38:Y:5242408-C-A | ** | ||||||
| hg19:Y:5163531-C-A hg38:Y:5295490-C-A | ** | ||||||
| hg19:Y:5241894-C-A hg38:Y:5373853-C-A | ** | ||||||
| hg19:Y:5315767-C-A hg38:Y:5447726-C-A | ** | ||||||
| hg19:Y:5388471-G-T hg38:Y:5520430-G-T | ** | ||||||
| hg19:Y:5404272-T-C hg38:Y:5536231-T-C | ** | ||||||
| hg19:Y:5624377-G-T hg38:Y:5756336-G-T | ** | ||||||
| hg19:Y:5676520-A-C hg38:Y:5808479-A-C | ** | ||||||
| hg19:Y:5688634-C-A hg38:Y:5820593-C-A | ** | ||||||
| hg19:Y:5719279-G-T hg38:Y:5851238-G-T | ** | ||||||
| hg19:Y:5845187-C-A hg38:Y:5977146-C-A | ** | ||||||
| hg19:Y:5860225-C-A hg38:Y:5992184-C-A | ** | ||||||
| hg19:Y:5912658-G-T hg38:Y:6044617-G-T | ** | ||||||
| hg19:Y:6053968-G-T hg38:Y:6185927-G-T | ** | ||||||
| hg19:Y:6339114-AAC-A hg38:Y:6471073-AAC-A | IR3_Dst | ** | |||||
| hg19:Y:6359678-G-T hg38:Y:6491637-G-T | ** | ||||||
| hg19:Y:6403542-C-T hg38:Y:6535501-C-T | ** | ||||||
| hg19:Y:6403551-A-G hg38:Y:6535510-A-G | ** | ||||||
| hg19:Y:6435088-C-A hg38:Y:6567047-C-A | ** | ||||||
| hg19:Y:6505298-A-G hg38:Y:6637257-A-G | ** | ||||||
| hg19:Y:6541390-A-G hg38:Y:6673349-A-G | ** | ||||||
| hg19:Y:6765661-T-G hg38:Y:6897620-T-G | ** | ||||||
| hg19:Y:6833327-A-T hg38:Y:6965286-A-T | ** | ||||||
| hg19:Y:7021557-G-T hg38:Y:7153516-G-T | ** | ||||||
| hg19:Y:7030620-A-T hg38:Y:7162579-A-T | ** | ||||||
| hg19:Y:7100413-C-A hg38:Y:7232372-C-A | ** | ||||||
| hg19:Y:7108910-T-CCC hg38:Y:7240869-T-CCC | ** | ||||||
| hg19:Y:7113751-C-T hg38:Y:7245710-C-T | ** | ||||||
| hg19:Y:7113752-A-G hg38:Y:7245711-A-G | ** | ||||||
| hg19:Y:7113760-G-A hg38:Y:7245719-G-A | ** | ||||||
| hg19:Y:7113766-G-A hg38:Y:7245725-G-A | ** | ||||||
| hg19:Y:7340330-C-A hg38:Y:7472289-C-A | ** | ||||||
| hg19:Y:8692706-C-A hg38:Y:8824665-C-A | ** | ||||||
| hg19:Y:8901365-A-T hg38:Y:9033324-A-T | ** | ||||||
| hg38:Y:9120337-G-T | ** | ||||||
| hg19:Y:9034682-G-T hg38:Y:9197073-G-T | ** | ||||||
| hg19:Y:9482388-T-A hg38:Y:9644779-T-A | ** | ||||||
| hg19:Y:9885450-G-T hg38:Y:10047841-G-T | ** | ||||||
| hg38:Y:10646117-C-A | ** | ||||||
| hg38:Y:10653324-C-T | ** | ||||||
| hg38:Y:10654265-C-G | ** | ||||||
| hg38:Y:10654810-C-G | ** | ||||||
| hg38:Y:10654826-T-A | ** | ||||||
| hg38:Y:10665090-T-G | ** | ||||||
| hg38:Y:10691954-G-T | ** | ||||||
| hg38:Y:10692357-A-T | ** | ||||||
| hg38:Y:10692916-C-A | ** | ||||||
| hg38:Y:10768538-T-C | ** | ||||||
| hg38:Y:10772727-T-C | ** | ||||||
| hg38:Y:10792147-G-A | ** | ||||||
| hg38:Y:10800400-C-T | ** | ||||||
| hg38:Y:10848228-A-G | ** | ||||||
| hg38:Y:10855976-C-G | ** | ||||||
| hg38:Y:10861856-A-T | ** | ||||||
| hg38:Y:10877203-C-A | ** | ||||||
| hg38:Y:10886610-C-A | ** | ||||||
| hg38:Y:10901315-C-A | ** | ||||||
| hg38:Y:10902041-C-T | ** | ||||||
| hg38:Y:10909693-A-G | ** | ||||||
| hg38:Y:10921853-C-A | ** | ||||||
| hg38:Y:10924914-C-T | ** | ||||||
| hg38:Y:10925616-T-C | ** | ||||||
| hg38:Y:10926193-C-A | ** | ||||||
| hg38:Y:10930609-T-C | ** | ||||||
| hg38:Y:10932176-C-A | ** | ||||||
| hg38:Y:10932412-T-G | ** | ||||||
| hg38:Y:10938341-C-CAATG | ** | ||||||
| hg38:Y:10941659-C-A | ** | ||||||
| hg38:Y:10942107-C-A | ** | ||||||
| hg38:Y:10956209-G-C | ** | ||||||
| hg38:Y:10973442-A-G | ** | ||||||
| hg38:Y:10989363-T-C | ** | ||||||
| hg38:Y:10993199-ACAGCA-C | ** | ||||||
| hg38:Y:10993212-C-T | ** | ||||||
| hg38:Y:11000004-C-A | ** | ||||||
| hg38:Y:11000041-T-G | ** | ||||||
| hg38:Y:11002252-T-G | ** | ||||||
| hg38:Y:11007780-T-C | ** | ||||||
| hg38:Y:11012087-C-T | ** | ||||||
| hg38:Y:11020822-C-G | ** | ||||||
| hg38:Y:11020826-A-T | ** | ||||||
| hg38:Y:11020862-C-T | ** | ||||||
| hg38:Y:11032294-C-G | ** | ||||||
| hg38:Y:11037135-C-CCGCAATCCATTCCAT | ** | ||||||
| hg19:Y:13278462-G-T hg38:Y:11122786-G-T | ** | ||||||
| hg19:Y:13513554-A-C hg38:Y:11357878-A-C | ** | ||||||
| hg19:Y:13564336-C-A hg38:Y:11408660-C-A | ** | ||||||
| hg19:Y:13710381-G-A hg38:Y:11554705-G-A | DYZ17 | ** | |||||
| hg19:Y:13958009-G-T hg38:Y:11837303-G-T | ** | ||||||
| hg19:Y:13974732-G-T hg38:Y:11854026-G-T | ** | ||||||
| hg19:Y:13981144-C-A hg38:Y:11860438-C-A | ** | ||||||
| hg19:Y:14146951-A-AT hg38:Y:12026245-A-AT | ** | ||||||
| hg19:Y:14181506-CT-C hg38:Y:12060800-CT-C | ** | ||||||
| hg19:Y:14286154-A-G hg38:Y:12165448-A-G | ** | ||||||
| hg19:Y:14565952-G-T hg38:Y:12454152-G-T | ** | ||||||
| hg19:Y:14591813-CTTTTT-C hg38:Y:12480013-CTTTTT-C | 12×T | ** | |||||
| hg19:Y:14671346-C-A hg38:Y:12559412-C-A | ** | ||||||
| hg19:Y:15070403-G-A hg38:Y:12958494-G-A | ** | ||||||
| hg19:Y:15149948-G-T hg38:Y:13038035-G-T | ** | ||||||
| hg19:Y:15402847-G-A hg38:Y:13290967-G-A | ** | ||||||
| hg19:Y:15423160-A-G hg38:Y:13311280-A-G | ** | ||||||
| hg19:Y:15469284-T-A hg38:Y:13357404-T-A | ** | ||||||
| hg19:Y:15498068-C-T hg38:Y:13386188-C-T | ** | ||||||
| hg19:Y:15498119-T-C hg38:Y:13386239-T-C | ** | ||||||
| hg19:Y:15498130-G-C hg38:Y:13386250-G-C | ** | ||||||
| hg19:Y:15498147-A-C hg38:Y:13386267-A-C | ** | ||||||
| hg19:Y:15842727-T-C hg38:Y:13730847-T-C | ** | ||||||
| hg19:Y:15957452-C-A hg38:Y:13845572-C-A | FTA36404 | ** | |||||
| hg19:Y:15971542-T-C hg38:Y:13859662-T-C | ** | ||||||
| hg19:Y:16030942-G-A hg38:Y:13919062-G-A | ** | ||||||
| hg19:Y:16411192-A-C hg38:Y:14299312-A-C | ** | ||||||
| hg19:Y:16467502-G-A hg38:Y:14355622-G-A | ** | ||||||
| hg19:Y:16621295-T-C hg38:Y:14509415-T-C | ** | ||||||
| hg19:Y:16818995-A-G hg38:Y:14707115-A-G | ** | ||||||
| hg19:Y:16967433-C-A hg38:Y:14855553-C-A | ** | ||||||
| hg19:Y:17098342-C-T hg38:Y:14986462-C-T | ** | ||||||
| hg19:Y:17122539-TC-T hg38:Y:15010659-TC-T | ** | ||||||
| hg19:Y:17155845-C-A hg38:Y:15043965-C-A | ** | ||||||
| hg19:Y:17317792-C-A hg38:Y:15205912-C-A | ** | ||||||
| hg19:Y:17380665-G-T hg38:Y:15268785-G-T | ** | ||||||
| hg19:Y:17440366-C-A hg38:Y:15328486-C-A | ** | ||||||
| hg19:Y:17638288-C-A hg38:Y:15526408-C-A | ** | ||||||
| hg19:Y:17683120-G-T hg38:Y:15571240-G-T | ** | ||||||
| hg19:Y:17822140-C-A hg38:Y:15710260-C-A | ** | ||||||
| hg19:Y:17822152-G-T hg38:Y:15710272-G-T | ** | ||||||
| hg19:Y:17822174-G-T hg38:Y:15710294-G-T | ** | ||||||
| hg19:Y:17850218-G-T hg38:Y:15738338-G-T | ** | ||||||
| hg19:Y:18215843-GCTAATTT-G hg38:Y:16103963-GCTAATTT-G | ** | ||||||
| hg19:Y:18263750-G-T hg38:Y:16151870-G-T | ** | ||||||
| hg19:Y:18321299-T-C hg38:Y:16209419-T-C | P6_Prx | ** | |||||
| hg19:Y:18464534-G-T hg38:Y:16352654-G-T | P6_Dst | ** | |||||
| hg19:Y:18528839-C-A hg38:Y:16416959-C-A | P6_Dst | ** | |||||
| hg19:Y:18687702-AC-A hg38:Y:16575822-AC-A | ** | ||||||
| hg19:Y:18730470-G-A hg38:Y:16618590-G-A | ** | ||||||
| hg19:Y:18905359-A-G hg38:Y:16793479-A-G | ** | ||||||
| hg19:Y:19053354-A-C hg38:Y:16941474-A-C | ** | ||||||
| hg19:Y:19062134-C-A hg38:Y:16950254-C-A | ** | ||||||
| hg19:Y:19125515-G-A hg38:Y:17013635-G-A | ** | ||||||
| hg19:Y:19125530-C-T hg38:Y:17013650-C-T | ** | ||||||
| hg19:Y:19125538-A-T hg38:Y:17013658-A-T | ** | ||||||
| hg19:Y:19125540-A-AG hg38:Y:17013660-A-AG | ** | ||||||
| hg19:Y:19125577-C-T hg38:Y:17013697-C-T | ** | ||||||
| hg19:Y:19125586-T-C hg38:Y:17013706-T-C | ** | ||||||
| hg19:Y:19125587-C-T hg38:Y:17013707-C-T | ** | ||||||
| hg19:Y:19125621-G-T hg38:Y:17013741-G-T | ** | ||||||
| hg19:Y:19189479-G-A hg38:Y:17077599-G-A | ** | ||||||
| hg19:Y:19189503-A-C hg38:Y:17077623-A-C | ** | ||||||
| hg19:Y:19189576-TA-T hg38:Y:17077696-TA-T | ** | ||||||
| hg19:Y:19464005-T-G hg38:Y:17352125-T-G | ** | ||||||
| hg19:Y:19552353-T-A hg38:Y:17440473-T-A | ** | ||||||
| hg19:Y:19678803-A-C hg38:Y:17566923-A-C | P5_Prx | ** | |||||
| hg19:Y:19868054-G-T hg38:Y:17756174-G-T | P5_Prx | ** | |||||
| hg19:Y:20248125-CTCTTTTTTTCG-C hg38:Y:18086239-CTCTTTTTTTCG-C | P5_Dst | ** | |||||
| hg19:Y:20312716-T-C hg38:Y:18150830-T-C | P5_Dst | ** | |||||
| hg19:Y:20713362-A-C hg38:Y:18551476-A-C | P4_Prx | ** | |||||
| hg19:Y:20910076-T-G hg38:Y:18748190-T-G | P4_Dst | ** | |||||
| hg19:Y:20910105-C-A hg38:Y:18748219-C-A | P4_Dst | ** | |||||
| hg19:Y:20910109-C-A hg38:Y:18748223-C-A | P4_Dst | ** | |||||
| hg19:Y:20910110-C-A hg38:Y:18748224-C-A | P4_Dst | ** | |||||
| hg19:Y:21118561-A-C hg38:Y:18956675-A-C | ** | ||||||
| hg19:Y:21464774-C-G hg38:Y:19302888-C-G | ** | ||||||
| hg19:Y:21604144-C-A hg38:Y:19442258-C-A | ** | ||||||
| hg19:Y:21874964-C-A hg38:Y:19713078-C-A | ** | ||||||
| hg19:Y:22169288-G-T hg38:Y:20007402-G-T | FT337 | ** | |||||
| hg19:Y:22304380-T-A hg38:Y:20142494-T-A | DYZ19 | ** | |||||
| hg19:Y:22304394-T-A hg38:Y:20142508-T-A | DYZ19 | ** | |||||
| hg19:Y:22304396-C-G hg38:Y:20142510-C-G | DYZ19 | ** | |||||
| hg19:Y:23226199-A-C hg38:Y:21064313-A-C | ** | ||||||
| hg19:Y:23276562-CA-C hg38:Y:21114676-CA-C | ** | ||||||
| hg19:Y:23387559-C-A hg38:Y:21225673-C-A | ** | ||||||
| hg19:Y:23442702-G-T hg38:Y:21280816-G-T | ** | ||||||
| hg19:Y:23808042-C-A hg38:Y:21646156-C-A | ** | ||||||
| hg19:Y:23997408-C-A hg38:Y:21851261-C-A | ** | ||||||
| hg19:Y:24069740-A-C hg38:Y:21923593-A-C | P3_b1 | ** | |||||
| hg19:Y:24240649-T-G hg38:Y:22094502-T-G | P3_b1 | ** | |||||
| hg19:Y:24265005-T-G hg38:Y:22118858-T-G | P3_b1 | ** | |||||
| hg19:Y:24363857-C-G hg38:Y:22217710-C-G | ** | ||||||
| hg19:Y:24518514-T-A hg38:Y:22372367-T-A | ** | ||||||
| hg19:Y:25930292-A-T hg38:Y:23784145-A-T | P1_Y1 | ** | |||||
| hg19:Y:26140300-T-A hg38:Y:23994153-T-A | P1_Y1 | ** | |||||
| hg19:Y:26421469-GT-G hg38:Y:24275322-GT-G | P1_Y1 | ** | |||||
| hg19:Y:27739939-T-G hg38:Y:25593792-T-G | P1_Y2 | ** | |||||
| hg19:Y:28575050-GT-G hg38:Y:26428903-GT-G | ** | ||||||
| hg19:Y:28614060-C-A hg38:Y:26467913-C-A | ** | ||||||
| hg19:Y:28616827-T-C hg38:Y:26470680-T-C | ** | ||||||
| hg19:Y:28651966-C-A hg38:Y:26505819-C-A | ** | ||||||
| hg19:Y:28793041-G-A hg38:Y:26646894-G-A | ** | ||||||
| hg19:Y:28818009-GTGGAA-G hg38:Y:26671862-GTGGAA-G | ** | ||||||
| hg38:Y:56728161-T-C | ** | ||||||
| hg38:Y:56752201-G-A | ** | ||||||
| hg38:Y:56840720-C-A | ** | ||||||
| hg38:Y:56883088-T-C | ** | ||||||
| hg19:Y:17723066-C-A hg38:Y:15611186-C-A | *** | ||||||
| hg38:Y:10945344-C-A | *** | ||||||
| hg38:Y:11019212-C-A | *** | ||||||
| hg19:Y:21732663-CTTTT-C hg38:Y:19570777-CTTTT-C | 14×T | *** | |||||
| hg38:Y:10760980-G-A | *** | ||||||
| hg19:Y:18733194-C-A hg38:Y:16621314-C-A | *** | ||||||
| hg38:Y:10816690-T-C | *** | ||||||
| hg19:Y:5895149-G-GTA hg38:Y:6027108-G-GTA | *** | ||||||
| hg38:Y:10766726-C-T | *** | ||||||
| hg38:Y:10773172-C-A | *** | ||||||
| hg38:Y:10689583-A-C | FGC79228 | *** | |||||
| hg38:Y:10689627-T-G | *** | ||||||
| hg38:Y:10690306-T-C | *** | ||||||
| hg19:Y:2767983-G-T hg38:Y:2899942-G-T | *** | ||||||
| hg38:Y:10773176-C-T | *** | ||||||
| hg38:Y:10761005-T-A | *** | ||||||
| hg38:Y:10760963-C-G | *** | ||||||
| hg38:Y:10760983-C-A | *** | ||||||
| hg38:Y:10761009-A-T | *** | ||||||
| hg19:Y:14825125-CTTTTT-C hg38:Y:12713192-CTTTTT-C | 20×T | *** | |||||
| hg19:Y:13449755-AC-A hg38:Y:11294079-AC-A | *** | ||||||
| hg19:Y:15863237-C-A hg38:Y:13751357-C-A | *** | ||||||
| hg38:Y:11028132-C-A | *** | ||||||
| hg19:Y:6744539-C-A hg38:Y:6876498-C-A | *** | ||||||
| hg19:Y:16505952-C-A hg38:Y:14394072-C-A | *** | ||||||
| hg38:Y:10796088-A-G | *** | ||||||
| hg19:Y:18389128-C-A hg38:Y:16277248-C-A | P6_Gap | *** | |||||
| hg38:Y:10963077-C-A | *** | ||||||
| hg19:Y:21413720-C-A hg38:Y:19251834-C-A | *** | ||||||
| hg19:Y:14370790-C-A hg38:Y:12250086-C-A | *** | ||||||
| hg19:Y:3079385-C-T hg38:Y:3211344-C-T | FTA34423 | *** | |||||
| hg19:Y:3531989-G-T hg38:Y:3663948-G-T | *** | ||||||
| hg19:Y:6403556-A-T hg38:Y:6535515-A-T | *** | ||||||
| hg19:Y:6403560-A-T hg38:Y:6535519-A-T | *** | ||||||
| hg19:Y:7091352-C-T hg38:Y:7223311-C-T | *** | ||||||
| hg19:Y:7861435-C-A hg38:Y:7993394-C-A | *** | ||||||
| hg38:Y:10682844-C-A | *** | ||||||
| hg38:Y:10752538-C-A | FT429665 | *** | |||||
| hg38:Y:10836357-C-A | *** | ||||||
| hg38:Y:10898944-C-CGACTT,TGACTT | *** | ||||||
| hg38:Y:11019228-C-A | *** | ||||||
| hg19:Y:15285854-T-C hg38:Y:13173953-T-C | *** | ||||||
| hg19:Y:15285994-T-C hg38:Y:13174093-T-C | *** | ||||||
| hg19:Y:15918356-G-A hg38:Y:13806476-G-A | *** | ||||||
| hg19:Y:16045084-A-G hg38:Y:13933204-A-G | *** | ||||||
| hg19:Y:16065130-A-G hg38:Y:13953250-A-G | *** | ||||||
| hg19:Y:17199575-G-A hg38:Y:15087695-G-A | *** | ||||||
| hg19:Y:18654684-C-A hg38:Y:16542804-C-A | *** | ||||||
| hg19:Y:21153142-G-A hg38:Y:18991256-G-A | *** | ||||||
| hg19:Y:21443373-C-A hg38:Y:19281487-C-A | *** | ||||||
| hg19:Y:23196578-T-C hg38:Y:21034692-T-C | *** | ||||||
| hg38:Y:56837230-G-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 649953 | 9665627 | 7794505 | 7673625 |
| Used in age calculations | 9665627 | 7794505 | 7673625 |
| Counts of SNPs | 13 | 10 |
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