Strange
BigY2: 298842MDKA Birth:
EnglandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 298842 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22311050-C-T hg38:Y:20149164-C-T | DYZ19 | A* | |||||
| hg19:Y:25947403-G-A hg38:Y:23801256-G-A | P1_Y1 | A* | |||||
| hg19:Y:21663576-G-A hg38:Y:19501690-G-A | BY134591 | Y | Y | + | |||
| hg19:Y:22457945-C-T hg38:Y:20296059-C-T | BY52730 | DYZ19 | + | ||||
| hg19:Y:23408627-T-C hg38:Y:21246741-T-C | BY145097 | Y | Y | + | |||
| hg19:Y:13983546-A-AGAAGGAAG hg38:Y:11862840-A-AGAAGGAAG | 11×GAAG | * | |||||
| hg19:Y:13838156-A-AGAATGGAATG hg38:Y:11717450-A-AGAATGGAATG | DYZ17 | 11×GAATG | * | ||||
| hg19:Y:24278183-C-CAAGAAAGAAGGA hg38:Y:22132036-C-CAAGAAAGAAGGA | P3_b1 | 22×AAGA | * | ||||
| hg19:Y:22257696-T-A hg38:Y:20095810-T-A | DYZ19 | * | |||||
| hg19:Y:22443168-G-A hg38:Y:20281282-G-A | DYZ19 | * | |||||
| hg19:Y:15076179-TC-T hg38:Y:12964269-TC-T | ** | ||||||
| hg19:Y:13487814-C-T hg38:Y:11332138-C-T | ** | ||||||
| hg19:Y:21412299-C-A hg38:Y:19250413-C-A | ** | ||||||
| hg19:Y:2909234-C-A hg38:Y:3041193-C-A | 16×A | ** | |||||
| hg19:Y:18390074-C-A hg38:Y:16278194-C-A | P6_Gap | ** | |||||
| hg19:Y:58971887-C-CAT hg38:Y:56825740-C-CAT | 12×AT | ** | |||||
| hg19:Y:20230152-TAA-T hg38:Y:18068266-TAA-T | P5_Dst | 16×A | ** | ||||
| hg19:Y:5241167-C-CCTTT hg38:Y:5373126-C-CCTTT | 11×CTTT | ** | |||||
| hg19:Y:18035768-T-C hg38:Y:15923888-T-C | Z25609 | ** | |||||
| hg19:Y:22258162-T-C hg38:Y:20096276-T-C | BY214565 | DYZ19 | ** | ||||
| hg19:Y:13487816-G-A hg38:Y:11332140-G-A | ** | ||||||
| hg19:Y:20746690-G-T hg38:Y:18584804-G-T | P4_Prx | ** | |||||
| hg19:Y:16292731-T-C hg38:Y:14180851-T-C | ** | ||||||
| hg19:Y:13488870-C-A hg38:Y:11333194-C-A | ** | ||||||
| hg19:Y:13809434-A-G hg38:Y:11688728-A-G | DYZ17 | ** | |||||
| hg19:Y:13487847-C-A hg38:Y:11332171-C-A | ** | ||||||
| hg19:Y:5869467-G-A hg38:Y:6001426-G-A | ** | ||||||
| hg38:Y:11014556-T-G | ** | ||||||
| hg19:Y:18361488-G-A hg38:Y:16249608-G-A | P6_Prx | ** | |||||
| hg19:Y:13478221-G-A hg38:Y:11322545-G-A | ** | ||||||
| hg19:Y:14562369-A-G hg38:Y:12450569-A-G | ** | ||||||
| hg19:Y:3374248-G-T hg38:Y:3506207-G-T | ** | ||||||
| hg19:Y:24421059-C-G hg38:Y:22274912-C-G | ** | ||||||
| hg19:Y:18185062-T-C hg38:Y:16073182-T-C | ** | ||||||
| hg19:Y:15049918-CAAAA-C hg38:Y:12938009-CAAAA-C | 18×A | ** | |||||
| hg38:Y:10821907-C-A | ** | ||||||
| hg38:Y2:18439-G-T | ** | ||||||
| hg38:Y:10845666-C-T | ** | ||||||
| hg19:Y:23415342-A-AT hg38:Y:21253456-A-AT | 21×T | ** | |||||
| hg19:Y:22505924-A-T hg38:Y:20344038-A-T | DYZ19 | ** | |||||
| hg38:Y:11037575-A-G | ** | ||||||
| hg38:Y:10659380-C-A | ** | ||||||
| hg38:Y:10845671-C-CGGTTA | ** | ||||||
| hg19:Y:18378959-CTTT-C hg38:Y:16267079-CTTT-C | P6_Prx | 28×T | ** | ||||
| hg19:Y:18825629-CAAAAAA-C hg38:Y:16713749-CAAAAAA-C | 20×A | ** | |||||
| hg38:Y:10787589-TTCCAC-T | ** | ||||||
| hg19:Y:16297369-G-T hg38:Y:14185489-G-T | ** | ||||||
| hg19:Y:6916357-C-A hg38:Y:7048316-C-A | ** | ||||||
| hg19:Y:8016968-C-T hg38:Y:8148927-C-T | ** | ||||||
| hg38:Y:10837808-A-C | ** | ||||||
| hg19:Y:21241758-A-ATT hg38:Y:19079872-A-ATT | 14×T | ** | |||||
| hg19:Y:15321358-T-A hg38:Y:13209476-T-A | ** | ||||||
| hg38:Y:11011400-G-T | ** | ||||||
| hg38:Y:10760024-C-A | ** | ||||||
| hg19:Y:16665500-C-A hg38:Y:14553620-C-A | ** | ||||||
| hg19:Y:21402214-TTAC-T hg38:Y:19240328-TTAC-T | ** | ||||||
| hg38:Y:10672003-C-A | ** | ||||||
| hg19:Y:14261431-C-A hg38:Y:12140725-C-A | ** | ||||||
| hg19:Y:21134920-A-C hg38:Y:18973034-A-C | ** | ||||||
| hg19:Y:3545619-G-T hg38:Y:3677578-G-T | ** | ||||||
| hg19:Y:7099937-C-A hg38:Y:7231896-C-A | ** | ||||||
| hg19:Y:18263856-C-CAA hg38:Y:16151976-C-CAA | 26×A | ** | |||||
| hg38:Y:10949505-A-T | ** | ||||||
| hg19:Y:16719707-C-A hg38:Y:14607827-C-A | ** | ||||||
| hg19:Y:9980448-C-A hg38:Y:10142839-C-A | ** | ||||||
| hg38:Y:10826427-T-C | ** | ||||||
| hg38:Y:10826438-A-C | ** | ||||||
| hg38:Y:10826440-C-G | ** | ||||||
| hg38:Y:10973579-T-A | ** | ||||||
| hg19:Y:24016988-T-TA hg38:Y:21870841-T-TA | ** | ||||||
| hg19:Y:28747703-TC-T hg38:Y:26601556-TC-T | ** | ||||||
| hg38:Y:56841429-G-T | ** | ||||||
| hg38:Y:10949473-T-C | ** | ||||||
| hg19:Y:15281593-C-A hg38:Y:13169692-C-A | ** | ||||||
| hg19:Y:28529656-C-A hg38:Y:26383509-C-A | ** | ||||||
| hg19:Y:19586519-T-C hg38:Y:17474639-T-C | P5_Prx | ** | |||||
| hg19:Y:2772911-C-A hg38:Y:2904870-C-A | ** | ||||||
| hg19:Y:16292670-G-A hg38:Y:14180790-G-A | ** | ||||||
| hg19:Y:16336897-GTTTTTT-G hg38:Y:14225017-GTTTTTT-G | 23×T | ** | |||||
| hg38:Y:11031028-G-T | ** | ||||||
| hg19:Y:23041173-C-A hg38:Y:20879287-C-A | ** | ||||||
| hg38:Y:10672541-C-A | ** | ||||||
| hg38:Y:10992137-C-A | ** | ||||||
| hg19:Y:6392523-C-A hg38:Y:6524482-C-A | ** | ||||||
| hg19:Y:4123538-C-A hg38:Y:4255497-C-A | ** | ||||||
| hg38:Y:10824141-C-G | ** | ||||||
| hg38:Y:10775794-A-C | ** | ||||||
| hg38:Y:10769774-G-T | ** | ||||||
| hg19:Y:9437245-C-A hg38:Y:9599636-C-A | ** | ||||||
| hg38:Y:10848895-C-T | ** | ||||||
| hg38:Y:10889294-A-C | ** | ||||||
| hg38:Y:10889310-T-A | ** | ||||||
| hg19:Y:4212818-C-A hg38:Y:4344777-C-A | ** | ||||||
| hg19:Y:7063643-C-A hg38:Y:7195602-C-A | ** | ||||||
| hg38:Y:10760024-C-CCATTA | ** | ||||||
| hg19:Y:16044417-C-A hg38:Y:13932537-C-A | ** | ||||||
| hg19:Y:5887570-C-A hg38:Y:6019529-C-A | ** | ||||||
| hg19:Y:22356899-C-A hg38:Y:20195013-C-A | DYZ19 | ** | |||||
| hg38:Y:10990073-T-TTCCCC | ** | ||||||
| hg38:Y:10775772-T-A | ** | ||||||
| hg19:Y:21011658-T-TC hg38:Y:18849772-T-TC | P4_Dst | ** | |||||
| hg19:Y:3804711-C-G hg38:Y:3936670-C-G | ** | ||||||
| hg38:Y:10990114-T-A | ** | ||||||
| hg19:Y:19071517-C-A hg38:Y:16959637-C-A | ** | ||||||
| hg19:Y:5869605-C-A hg38:Y:6001564-C-A | ** | ||||||
| hg19:Y:5443937-C-A hg38:Y:5575896-C-A | ** | ||||||
| hg19:Y:8735584-C-A hg38:Y:8867543-C-A | ** | ||||||
| hg38:Y:10625714-C-A | ** | ||||||
| hg19:Y:24252250-A-AG hg38:Y:22106103-A-AG | P3_b1 | ** | |||||
| hg19:Y:22615353-C-A hg38:Y:20453467-C-A | ** | ||||||
| hg19:Y:2665537-C-A hg38:Y:2797496-C-A | ** | ||||||
| hg19:Y:18035739-G-A hg38:Y:15923859-G-A | ** | ||||||
| hg19:Y:14622807-C-T hg38:Y:12511005-C-T | ** | ||||||
| hg19:Y:16292701-C-T hg38:Y:14180821-C-T | ** | ||||||
| hg19:Y:16292726-G-A hg38:Y:14180846-G-A | ** | ||||||
| hg19:Y:16292743-AT-A hg38:Y:14180863-AT-A | ** | ||||||
| hg38:Y:10951699-C-A | ** | ||||||
| hg19:Y:14605342-C-A hg38:Y:12493544-C-A | ** | ||||||
| hg19:Y:6453865-C-A hg38:Y:6585824-C-A | ** | ||||||
| hg19:Y:13488911-C-A hg38:Y:11333235-C-A | ** | ||||||
| hg38:Y:10805654-GCATTC-G | ** | ||||||
| hg19:Y:28518925-C-A hg38:Y:26372778-C-A | ** | ||||||
| hg38:Y:10949480-A-T | ** | ||||||
| hg19:Y:14622835-G-GA hg38:Y:12511033-G-GA | ** | ||||||
| hg19:Y:18847895-C-T hg38:Y:16736015-C-T | ** | ||||||
| hg19:Y:15452223-C-A hg38:Y:13340343-C-A | ** | ||||||
| hg19:Y:17486050-C-A hg38:Y:15374170-C-A | ** | ||||||
| hg38:Y:11019040-C-T | ** | ||||||
| hg19:Y:15179202-C-A hg38:Y:13067288-C-A | ** | ||||||
| hg19:Y:6512145-C-A hg38:Y:6644104-C-A | ** | ||||||
| hg19:Y:14622833-A-G hg38:Y:12511031-A-G | ** | ||||||
| hg19:Y:16033441-C-A hg38:Y:13921561-C-A | ** | ||||||
| hg38:Y:10837848-T-C | ** | ||||||
| hg19:Y:28778852-CTTT-C hg38:Y:26632705-CTTT-C | 33×T | ** | |||||
| hg19:Y:14445064-C-T hg38:Y:12324337-C-T | ** | ||||||
| hg19:Y:14272871-C-A hg38:Y:12152165-C-A | ** | ||||||
| hg19:Y:25031178-C-A hg38:Y:22885031-C-A | g1 | ** | |||||
| hg19:Y:22868820-A-G hg38:Y:20706934-A-G | ** | ||||||
| hg19:Y:21863852-C-A hg38:Y:19701966-C-A | ** | ||||||
| hg19:Y:21886981-G-T hg38:Y:19725095-G-T | ** | ||||||
| hg19:Y:4553044-G-T hg38:Y:4685003-G-T | ** | ||||||
| hg19:Y:15932440-C-A hg38:Y:13820560-C-A | ** | ||||||
| hg19:Y:7185264-C-G hg38:Y:7317223-C-G | ** | ||||||
| hg19:Y:13597332-C-A hg38:Y:11441656-C-A | ** | ||||||
| hg19:Y:9416809-A-T hg38:Y:9579200-A-T | ** | ||||||
| hg19:Y:16292677-C-A hg38:Y:14180797-C-A | ** | ||||||
| hg19:Y:15595161-A-C hg38:Y:13483281-A-C | ** | ||||||
| hg19:Y:24421086-T-C hg38:Y:22274939-T-C | ** | ||||||
| hg19:Y:8078530-G-T hg38:Y:8210489-G-T | FT204015 | ** | |||||
| hg19:Y:18728721-GAAA-G hg38:Y:16616841-GAAA-G | 16×A | ** | |||||
| hg19:Y:3111622-A-T hg38:Y:3243581-A-T | ** | ||||||
| hg19:Y:9652161-T-TAG hg38:Y:9814552-T-TAG | IR3_Prx | ** | |||||
| hg38:Y:10775776-C-A | ** | ||||||
| hg38:Y:10775788-G-A | ** | ||||||
| hg38:Y:10775822-G-C | ** | ||||||
| hg19:Y:7081337-C-T hg38:Y:7213296-C-T | ** | ||||||
| hg19:Y:28643657-C-A hg38:Y:26497510-C-A | ** | ||||||
| hg19:Y:7996855-C-A hg38:Y:8128814-C-A | ** | ||||||
| hg19:Y:22091132-TA-T hg38:Y:19929246-TA-T | 8×A | ** | |||||
| hg38:Y:10973951-T-C | ** | ||||||
| hg38:Y:10866491-C-A | ** | ||||||
| hg19:Y:14622804-T-A hg38:Y:12511002-T-A | ** | ||||||
| hg19:Y:15566808-C-A hg38:Y:13454928-C-A | ** | ||||||
| hg19:Y:23062330-C-A hg38:Y:20900444-C-A | ** | ||||||
| hg19:Y:28633054-A-T hg38:Y:26486907-A-T | ** | ||||||
| hg19:Y:18937363-C-A hg38:Y:16825483-C-A | ** | ||||||
| hg19:Y:24421069-G-A hg38:Y:22274922-G-A | ** | ||||||
| hg19:Y:6040381-C-A hg38:Y:6172340-C-A | ** | ||||||
| hg19:Y:13226847-C-A hg38:Y:11071171-C-A | ** | ||||||
| hg19:Y:26081760-C-CAG hg38:Y:23935613-C-CAG | P1_Y1 | ** | |||||
| hg38:Y:11031363-C-A | ** | ||||||
| hg38:Y:10840979-C-T | ** | ||||||
| hg19:Y:8735517-C-A hg38:Y:8867476-C-A | ** | ||||||
| hg38:Y:10822317-C-A | ** | ||||||
| hg19:Y:17318158-C-A hg38:Y:15206278-C-A | ** | ||||||
| hg19:Y:21162951-T-C hg38:Y:19001065-T-C | ** | ||||||
| hg38:Y:10949477-G-C | ** | ||||||
| hg38:Y:11676614-C-A | DYZ17 | ** | |||||
| hg19:Y:2980111-C-A hg38:Y:3112070-C-A | ** | ||||||
| hg19:Y:22079782-C-A hg38:Y:19917896-C-A | ** | ||||||
| hg19:Y:17722791-G-C hg38:Y:15610911-G-C | ** | ||||||
| hg19:Y:18174710-C-A hg38:Y:16062830-C-A | ** | ||||||
| hg19:Y:5691004-C-A hg38:Y:5822963-C-A | ** | ||||||
| hg38:Y:10663203-C-A | ** | ||||||
| hg19:Y:22356888-T-A hg38:Y:20195002-T-A | DYZ19 | ** | |||||
| hg38:Y:11654810-C-A | DYZ17 | ** | |||||
| hg19:Y:4959508-C-A hg38:Y:5091467-C-A | ** | ||||||
| hg19:Y:18966115-TC-T hg38:Y:16854235-TC-T | ** | ||||||
| hg38:Y:10804248-C-A | ** | ||||||
| hg19:Y:15793416-C-A hg38:Y:13681536-C-A | ** | ||||||
| hg19:Y:7199329-C-A hg38:Y:7331288-C-A | ** | ||||||
| hg19:Y:7970263-C-A hg38:Y:8102222-C-A | ** | ||||||
| hg38:Y:10775753-C-T | ** | ||||||
| hg19:Y:16292722-G-A hg38:Y:14180842-G-A | ** | ||||||
| hg38:Y:10949116-AATG-A | ** | ||||||
| hg19:Y:22765750-C-A hg38:Y:20603864-C-A | ** | ||||||
| hg19:Y:13907788-C-A hg38:Y:11787082-C-A | ** | ||||||
| hg19:Y:4302976-C-A hg38:Y:4434935-C-A | ** | ||||||
| hg19:Y:15109025-CTTT-C hg38:Y:12997112-CTTT-C | 11×T | ** | |||||
| hg19:Y:19356470-C-A hg38:Y:17244590-C-A | ** | ||||||
| hg38:Y:10889328-A-C | ** | ||||||
| hg19:Y:14635715-C-A hg38:Y:12523784-C-A | ** | ||||||
| hg19:Y:22615366-C-A hg38:Y:20453480-C-A | ** | ||||||
| hg38:Y:10963611-G-T | ** | ||||||
| hg19:Y:19472529-G-GTT hg38:Y:17360649-G-GTT | 13×T | ** | |||||
| hg19:Y:19155854-G-A hg38:Y:17043974-G-A | ** | ||||||
| hg19:Y:19429497-T-C hg38:Y:17317617-T-C | ** | ||||||
| hg19:Y:8977004-T-A hg38:Y:9139395-T-A | ** | ||||||
| hg38:Y:10677435-C-A | ** | ||||||
| hg38:Y:10847897-C-A | ** | ||||||
| hg19:Y:28742445-C-A hg38:Y:26596298-C-A | ** | ||||||
| hg19:Y:22590780-T-C hg38:Y:20428894-T-C | ** | ||||||
| hg19:Y:15931663-C-A hg38:Y:13819783-C-A | ** | ||||||
| hg19:Y:21107070-C-A hg38:Y:18945184-C-A | ** | ||||||
| hg19:Y:3389216-C-CAA hg38:Y:3521175-C-CAA | 10×A | ** | |||||
| hg38:Y:10973936-T-C | ** | ||||||
| hg38:Y:10840127-G-A | FT433587 | ** | |||||
| hg38:Y:10678583-C-A | ** | ||||||
| hg38:Y:56849642-G-T | ** | ||||||
| hg19:Y:2738804-C-A hg38:Y:2870763-C-A | ** | ||||||
| hg38:Y:10790597-C-A | ** | ||||||
| hg38:Y:11012197-C-A | ** | ||||||
| hg19:Y:17071155-G-T hg38:Y:14959275-G-T | ** | ||||||
| hg19:Y:2820045-C-A hg38:Y:2952004-C-A | ** | ||||||
| hg19:Y:2948190-A-G hg38:Y:3080149-A-G | ** | ||||||
| hg19:Y:3249637-G-T hg38:Y:3381596-G-T | ** | ||||||
| hg19:Y:3336899-G-A hg38:Y:3468858-G-A | ** | ||||||
| hg19:Y:3346503-C-A hg38:Y:3478462-C-A | ** | ||||||
| hg19:Y:3435726-T-C hg38:Y:3567685-T-C | ** | ||||||
| hg19:Y:3834529-G-A hg38:Y:3966488-G-A | ** | ||||||
| hg19:Y:3869916-G-A hg38:Y:4001875-G-A | ** | ||||||
| hg19:Y:3963018-C-A hg38:Y:4094977-C-A | ** | ||||||
| hg19:Y:4008973-T-G hg38:Y:4140932-T-G | ** | ||||||
| hg19:Y:4035750-T-C hg38:Y:4167709-T-C | ** | ||||||
| hg19:Y:4110464-G-T hg38:Y:4242423-G-T | ** | ||||||
| hg19:Y:4133861-T-C hg38:Y:4265820-T-C | ** | ||||||
| hg19:Y:4240417-A-G hg38:Y:4372376-A-G | ** | ||||||
| hg19:Y:4244461-T-A hg38:Y:4376420-T-A | ** | ||||||
| hg19:Y:4263267-C-A hg38:Y:4395226-C-A | ** | ||||||
| hg19:Y:4263288-C-A hg38:Y:4395247-C-A | ** | ||||||
| hg19:Y:4303196-C-A hg38:Y:4435155-C-A | ** | ||||||
| hg19:Y:4313718-C-A hg38:Y:4445677-C-A | ** | ||||||
| hg19:Y:4389545-A-G hg38:Y:4521504-A-G | ** | ||||||
| hg19:Y:4438775-C-A hg38:Y:4570734-C-A | ** | ||||||
| hg19:Y:4447287-A-G hg38:Y:4579246-A-G | ** | ||||||
| hg19:Y:4521641-A-C hg38:Y:4653600-A-C | ** | ||||||
| hg19:Y:4538772-C-A hg38:Y:4670731-C-A | ** | ||||||
| hg19:Y:4580456-C-T hg38:Y:4712415-C-T | ** | ||||||
| hg19:Y:4585330-C-A hg38:Y:4717289-C-A | ** | ||||||
| hg19:Y:4703782-A-G hg38:Y:4835741-A-G | ** | ||||||
| hg19:Y:4757189-T-A hg38:Y:4889148-T-A | ** | ||||||
| hg19:Y:4950829-C-G hg38:Y:5082788-C-G | ** | ||||||
| hg19:Y:4959586-T-A hg38:Y:5091545-T-A | ** | ||||||
| hg19:Y:4999610-C-A hg38:Y:5131569-C-A | ** | ||||||
| hg19:Y:5003155-C-G hg38:Y:5135114-C-G | ** | ||||||
| hg19:Y:5011051-C-A hg38:Y:5143010-C-A | ** | ||||||
| hg19:Y:5090376-G-T hg38:Y:5222335-G-T | ** | ||||||
| hg19:Y:5100451-G-A hg38:Y:5232410-G-A | ** | ||||||
| hg19:Y:5182752-G-T hg38:Y:5314711-G-T | ** | ||||||
| hg19:Y:5185050-C-A hg38:Y:5317009-C-A | ** | ||||||
| hg19:Y:5354472-A-G hg38:Y:5486431-A-G | ** | ||||||
| hg19:Y:5367013-A-G hg38:Y:5498972-A-G | ** | ||||||
| hg19:Y:5567707-GA-G hg38:Y:5699666-GA-G | 8×A | ** | |||||
| hg19:Y:5708372-C-G hg38:Y:5840331-C-G | ** | ||||||
| hg19:Y:5778756-CT-C hg38:Y:5910715-CT-C | ** | ||||||
| hg19:Y:5830395-C-A hg38:Y:5962354-C-A | ** | ||||||
| hg19:Y:5842677-C-T hg38:Y:5974636-C-T | ** | ||||||
| hg19:Y:5967504-C-A hg38:Y:6099463-C-A | ** | ||||||
| hg19:Y:5974024-C-A hg38:Y:6105983-C-A | ** | ||||||
| hg19:Y:6039440-C-A hg38:Y:6171399-C-A | ** | ||||||
| hg19:Y:6355832-G-T hg38:Y:6487791-G-T | ** | ||||||
| hg19:Y:6414374-C-A hg38:Y:6546333-C-A | ** | ||||||
| hg19:Y:6434552-C-A hg38:Y:6566511-C-A | ** | ||||||
| hg19:Y:6523817-G-A hg38:Y:6655776-G-A | ** | ||||||
| hg19:Y:6577171-C-A hg38:Y:6709130-C-A | ** | ||||||
| hg19:Y:6613270-T-C hg38:Y:6745229-T-C | ** | ||||||
| hg19:Y:6774129-C-A hg38:Y:6906088-C-A | ** | ||||||
| hg19:Y:7021629-C-A hg38:Y:7153588-C-A | ** | ||||||
| hg19:Y:7040583-C-A hg38:Y:7172542-C-A | ** | ||||||
| hg19:Y:7045649-C-A hg38:Y:7177608-C-A | ** | ||||||
| hg19:Y:7102191-C-A hg38:Y:7234150-C-A | ** | ||||||
| hg19:Y:7138446-TA-T hg38:Y:7270405-TA-T | ** | ||||||
| hg19:Y:7164355-C-A hg38:Y:7296314-C-A | ** | ||||||
| hg19:Y:7185181-G-T hg38:Y:7317140-G-T | ** | ||||||
| hg19:Y:7240961-A-T hg38:Y:7372920-A-T | ** | ||||||
| hg19:Y:7241996-C-A hg38:Y:7373955-C-A | ** | ||||||
| hg19:Y:7277519-C-A hg38:Y:7409478-C-A | ** | ||||||
| hg19:Y:7713179-A-G hg38:Y:7845138-A-G | ** | ||||||
| hg19:Y:7896657-G-T hg38:Y:8028616-G-T | ** | ||||||
| hg19:Y:8073229-T-G hg38:Y:8205188-T-G | ** | ||||||
| hg19:Y:8166639-C-A hg38:Y:8298598-C-A | ** | ||||||
| hg19:Y:8824254-C-A hg38:Y:8956213-C-A | ** | ||||||
| hg38:Y:9123227-A-G | ** | ||||||
| hg19:Y:8988516-A-G hg38:Y:9150907-A-G | ** | ||||||
| hg19:Y:9076259-C-A hg38:Y:9238650-C-A | ** | ||||||
| hg19:Y:9140034-C-A hg38:Y:9302425-C-A | ** | ||||||
| hg19:Y:9416783-C-T hg38:Y:9579174-C-T | ** | ||||||
| hg19:Y:9416797-T-C hg38:Y:9579188-T-C | ** | ||||||
| hg19:Y:9416799-T-A hg38:Y:9579190-T-A | ** | ||||||
| hg19:Y:9416800-G-A hg38:Y:9579191-G-A | ** | ||||||
| hg19:Y:9416810-C-G hg38:Y:9579201-C-G | ** | ||||||
| hg19:Y:9936429-G-C hg38:Y:10098820-G-C | ** | ||||||
| hg19:Y:9940965-C-A hg38:Y:10103356-C-A | ** | ||||||
| hg19:Y:9968397-T-G hg38:Y:10130788-T-G | ** | ||||||
| hg19:Y:10042001-G-T hg38:Y:10204392-G-T | ** | ||||||
| hg38:Y:10683247-C-CCGATACTTTCCATTACAA | ** | ||||||
| hg38:Y:10683250-C-CAGTACAT | ** | ||||||
| hg38:Y:10757347-C-A | ** | ||||||
| hg38:Y:10761277-T-A | ** | ||||||
| hg38:Y:10761279-C-A | ** | ||||||
| hg38:Y:10761287-T-C | ** | ||||||
| hg38:Y:10768852-C-A | ** | ||||||
| hg38:Y:10769750-CAGTCCA-C | ** | ||||||
| hg38:Y:10769776-C-T | ** | ||||||
| hg38:Y:10775132-A-G | ** | ||||||
| hg38:Y:10775203-C-A | ** | ||||||
| hg38:Y:10775275-C-A | ** | ||||||
| hg38:Y:10775752-A-G | ** | ||||||
| hg38:Y:10775754-A-G | ** | ||||||
| hg38:Y:10785062-C-A | ** | ||||||
| hg38:Y:10785158-C-A | ** | ||||||
| hg38:Y:10787240-G-GGC | ** | ||||||
| hg38:Y:10787243-GTC-G | ** | ||||||
| hg38:Y:10787254-T-C | ** | ||||||
| hg38:Y:10800170-A-T | ** | ||||||
| hg38:Y:10812777-C-T | ** | ||||||
| hg38:Y:10818424-CGTGAT-C | ** | ||||||
| hg38:Y:10818826-A-G | ** | ||||||
| hg38:Y:10821918-ATTC-A | ** | ||||||
| hg38:Y:10828307-C-T | ** | ||||||
| hg38:Y:10837771-T-C | ** | ||||||
| hg38:Y:10837781-A-C | ** | ||||||
| hg38:Y:10837797-ATTCCC-A | ** | ||||||
| hg38:Y:10837828-T-C | ** | ||||||
| hg38:Y:10840983-C-T | ** | ||||||
| hg38:Y:10843769-A-C | ** | ||||||
| hg38:Y:10844318-C-T | ** | ||||||
| hg38:Y:10847839-TTCCAC-T | ** | ||||||
| hg38:Y:10848908-T-G | ** | ||||||
| hg38:Y:10848913-A-T | ** | ||||||
| hg38:Y:10848914-C-T | ** | ||||||
| hg38:Y:10848923-A-G | ** | ||||||
| hg38:Y:10848934-C-CTCCACTCCAT | ** | ||||||
| hg38:Y:10866897-C-A | ** | ||||||
| hg38:Y:10877735-A-C | ** | ||||||
| hg38:Y:10879357-C-A | ** | ||||||
| hg38:Y:10883603-A-G | ** | ||||||
| hg38:Y:10888247-C-A | ** | ||||||
| hg38:Y:10889982-G-T | ** | ||||||
| hg38:Y:10901109-C-A | ** | ||||||
| hg38:Y:10901216-C-A | ** | ||||||
| hg38:Y:10924619-G-T | ** | ||||||
| hg38:Y:10933320-C-A | ** | ||||||
| hg38:Y:10949467-C-CCTTTACATTT | ** | ||||||
| hg38:Y:10949475-C-T | ** | ||||||
| hg38:Y:10958545-GCACTC-G | ** | ||||||
| hg38:Y:10968865-C-A | ** | ||||||
| hg38:Y:10973922-C-CCAATG | ** | ||||||
| hg38:Y:10982454-TA-T | ** | ||||||
| hg38:Y:10983081-C-A | FT439142 | ** | |||||
| hg38:Y:10983109-T-A | ** | ||||||
| hg38:Y:10986542-T-C | ** | ||||||
| hg38:Y:10988033-C-A | ** | ||||||
| hg38:Y:10996213-A-G | ** | ||||||
| hg38:Y:11005352-C-A | ** | ||||||
| hg38:Y:11007380-G-A | ** | ||||||
| hg38:Y:11031351-C-T | ** | ||||||
| hg19:Y:13214098-C-A hg38:Y:11058422-C-A | ** | ||||||
| hg19:Y:13242798-C-A hg38:Y:11087122-C-A | ** | ||||||
| hg19:Y:13255340-C-A hg38:Y:11099664-C-A | ** | ||||||
| hg19:Y:13433147-C-A hg38:Y:11277471-C-A | ** | ||||||
| hg19:Y:13488886-C-A hg38:Y:11333210-C-A | ** | ||||||
| hg19:Y:13535777-T-A hg38:Y:11380101-T-A | ** | ||||||
| hg19:Y:13597357-C-A hg38:Y:11441681-C-A | ** | ||||||
| hg19:Y:13643356-C-T hg38:Y:11487680-C-T | ** | ||||||
| hg38:Y:11669768-G-T | DYZ17 | ** | |||||
| hg38:Y:11674255-T-G | DYZ17 | ** | |||||
| hg19:Y:13809423-A-T hg38:Y:11688717-A-T | DYZ17 | ** | |||||
| hg19:Y:13809433-G-T hg38:Y:11688727-G-T | DYZ17 | ** | |||||
| hg19:Y:13870576-C-A hg38:Y:11749870-C-A | ** | ||||||
| hg19:Y:13884452-T-C hg38:Y:11763746-T-C | ** | ||||||
| hg19:Y:13884454-C-T hg38:Y:11763748-C-T | ** | ||||||
| hg19:Y:13902932-G-A hg38:Y:11782226-G-A | ** | ||||||
| hg19:Y:13919207-TCA-T hg38:Y:11798501-TCA-T | ** | ||||||
| hg19:Y:13929911-T-C hg38:Y:11809205-T-C | ** | ||||||
| hg19:Y:13935815-C-A hg38:Y:11815109-C-A | ** | ||||||
| hg19:Y:13995736-T-A hg38:Y:11875030-T-A | ** | ||||||
| hg19:Y:14019641-C-T hg38:Y:11898935-C-T | ** | ||||||
| hg19:Y:14047823-G-A hg38:Y:11927117-G-A | ** | ||||||
| hg19:Y:14089632-C-A hg38:Y:11968926-C-A | ** | ||||||
| hg19:Y:14118247-T-C hg38:Y:11997541-T-C | ** | ||||||
| hg19:Y:14155644-C-G hg38:Y:12034938-C-G | ** | ||||||
| hg19:Y:14180478-A-T hg38:Y:12059772-A-T | ** | ||||||
| hg19:Y:14425056-G-A hg38:Y:12304331-G-A | FTA39159 | ** | |||||
| hg19:Y:14549257-C-A hg38:Y:12437458-C-A | ** | ||||||
| hg19:Y:14562366-TAG-T hg38:Y:12450566-TAG-T | ** | ||||||
| hg19:Y:14570754-AC-A hg38:Y:12458954-AC-A | ** | ||||||
| hg19:Y:14622808-T-G hg38:Y:12511006-T-G | ** | ||||||
| hg19:Y:14648814-A-T hg38:Y:12536879-A-T | ** | ||||||
| hg19:Y:14685814-G-C hg38:Y:12573880-G-C | ** | ||||||
| hg19:Y:14757248-C-A hg38:Y:12645317-C-A | ** | ||||||
| hg19:Y:14757437-A-G hg38:Y:12645506-A-G | ** | ||||||
| hg19:Y:14858840-T-A hg38:Y:12746906-T-A | ** | ||||||
| hg19:Y:14911072-T-C hg38:Y:12799139-T-C | ** | ||||||
| hg19:Y:15131703-C-T hg38:Y:13019790-C-T | ** | ||||||
| hg19:Y:15397575-C-A hg38:Y:13285695-C-A | ** | ||||||
| hg19:Y:15575015-C-A hg38:Y:13463135-C-A | ** | ||||||
| hg19:Y:15595162-T-C hg38:Y:13483282-T-C | ** | ||||||
| hg19:Y:15655139-T-C hg38:Y:13543259-T-C | ** | ||||||
| hg19:Y:15684355-C-A hg38:Y:13572475-C-A | ** | ||||||
| hg19:Y:15775444-T-G hg38:Y:13663564-T-G | ** | ||||||
| hg19:Y:15842714-A-G hg38:Y:13730834-A-G | ** | ||||||
| hg19:Y:15842843-C-G hg38:Y:13730963-C-G | ** | ||||||
| hg19:Y:16039064-T-C hg38:Y:13927184-T-C | FT260912 | ** | |||||
| hg19:Y:16056911-C-T hg38:Y:13945031-C-T | ** | ||||||
| hg19:Y:16092815-C-A hg38:Y:13980935-C-A | ** | ||||||
| hg19:Y:16292680-C-A hg38:Y:14180800-C-A | ** | ||||||
| hg19:Y:16292702-A-C hg38:Y:14180822-A-C | ** | ||||||
| hg19:Y:16292733-C-G hg38:Y:14180853-C-G | ** | ||||||
| hg19:Y:16292734-G-C hg38:Y:14180854-G-C | ** | ||||||
| hg19:Y:16292770-G-C hg38:Y:14180890-G-C | ** | ||||||
| hg19:Y:16425666-C-A hg38:Y:14313786-C-A | ** | ||||||
| hg19:Y:16490805-G-T hg38:Y:14378925-G-T | ** | ||||||
| hg19:Y:16516233-T-G hg38:Y:14404353-T-G | ** | ||||||
| hg19:Y:16516236-T-G hg38:Y:14404356-T-G | ** | ||||||
| hg19:Y:16666126-G-C hg38:Y:14554246-G-C | ** | ||||||
| hg19:Y:16679358-G-A hg38:Y:14567478-G-A | ** | ||||||
| hg19:Y:16682857-T-A hg38:Y:14570977-T-A | ** | ||||||
| hg19:Y:16701956-G-T hg38:Y:14590076-G-T | ** | ||||||
| hg19:Y:16702946-A-G hg38:Y:14591066-A-G | ** | ||||||
| hg19:Y:17083254-A-C hg38:Y:14971374-A-C | ** | ||||||
| hg19:Y:17183200-C-A hg38:Y:15071320-C-A | ** | ||||||
| hg19:Y:17215867-A-G hg38:Y:15103987-A-G | ** | ||||||
| hg19:Y:17453126-T-C hg38:Y:15341246-T-C | ** | ||||||
| hg19:Y:17481447-T-A hg38:Y:15369567-T-A | ** | ||||||
| hg19:Y:17503904-A-C hg38:Y:15392024-A-C | ** | ||||||
| hg19:Y:17699506-G-A hg38:Y:15587626-G-A | ** | ||||||
| hg19:Y:17926595-A-T hg38:Y:15814715-A-T | ** | ||||||
| hg19:Y:17929746-G-T hg38:Y:15817866-G-T | ** | ||||||
| hg19:Y:17953937-G-C hg38:Y:15842057-G-C | ** | ||||||
| hg19:Y:17968902-T-G hg38:Y:15857022-T-G | ** | ||||||
| hg19:Y:18035759-G-C hg38:Y:15923879-G-C | ** | ||||||
| hg19:Y:18035778-C-A hg38:Y:15923898-C-A | ** | ||||||
| hg19:Y:18119881-A-G hg38:Y:16008001-A-G | ** | ||||||
| hg19:Y:18159374-A-G hg38:Y:16047494-A-G | ** | ||||||
| hg19:Y:18189453-A-G hg38:Y:16077573-A-G | ** | ||||||
| hg19:Y:18190814-C-A hg38:Y:16078934-C-A | FT405931 | ** | |||||
| hg19:Y:18230684-G-A hg38:Y:16118804-G-A | ** | ||||||
| hg19:Y:18382005-C-A hg38:Y:16270125-C-A | P6_Gap | ** | |||||
| hg19:Y:18653391-C-A hg38:Y:16541511-C-A | ** | ||||||
| hg19:Y:18849332-T-G hg38:Y:16737452-T-G | ** | ||||||
| hg19:Y:18874223-A-G hg38:Y:16762343-A-G | ** | ||||||
| hg19:Y:18976591-CACATGGACA-C hg38:Y:16864711-CACATGGACA-C | ** | ||||||
| hg19:Y:19014406-G-C hg38:Y:16902526-G-C | ** | ||||||
| hg19:Y:19042274-G-A hg38:Y:16930394-G-A | ** | ||||||
| hg19:Y:19112538-C-A hg38:Y:17000658-C-A | 7×CCTT | ** | |||||
| hg19:Y:19129317-C-A hg38:Y:17017437-C-A | ** | ||||||
| hg19:Y:19235647-A-G hg38:Y:17123767-A-G | ** | ||||||
| hg19:Y:19377351-A-C hg38:Y:17265471-A-C | ** | ||||||
| hg19:Y:19416459-A-C hg38:Y:17304579-A-C | ** | ||||||
| hg19:Y:19505360-GT-G hg38:Y:17393480-GT-G | ** | ||||||
| hg19:Y:19544082-A-T hg38:Y:17432202-A-T | ** | ||||||
| hg19:Y:20024370-T-C hg38:Y:17912490-T-C | P5_Prx | ** | |||||
| hg19:Y:20470208-A-G hg38:Y:18308322-A-G | P5_Dst | ** | |||||
| hg19:Y:20746690-G-GTT hg38:Y:18584804-G-GTT | P4_Prx | ** | |||||
| hg19:Y:21048383-G-A hg38:Y:18886497-G-A | ** | ||||||
| hg19:Y:21241706-C-A hg38:Y:19079820-C-A | ** | ||||||
| hg19:Y:21241741-A-C hg38:Y:19079855-A-C | ** | ||||||
| hg19:Y:21371388-C-A hg38:Y:19209502-C-A | ** | ||||||
| hg19:Y:21394483-C-A hg38:Y:19232597-C-A | ** | ||||||
| hg19:Y:21488920-C-A hg38:Y:19327034-C-A | ** | ||||||
| hg19:Y:21828555-C-A hg38:Y:19666669-C-A | ** | ||||||
| hg19:Y:21922036-G-T hg38:Y:19760150-G-T | ** | ||||||
| hg19:Y:22080762-C-T hg38:Y:19918876-C-T | ** | ||||||
| hg19:Y:22084841-AC-A hg38:Y:19922955-AC-A | ** | ||||||
| hg19:Y:22146597-A-G hg38:Y:19984711-A-G | ** | ||||||
| hg19:Y:22150171-T-A hg38:Y:19988285-T-A | ** | ||||||
| hg19:Y:22316382-T-G hg38:Y:20154496-T-G | DYZ19 | ** | |||||
| hg19:Y:22356892-G-C hg38:Y:20195006-G-C | DYZ19 | ** | |||||
| hg19:Y:22356895-G-A hg38:Y:20195009-G-A | DYZ19 | ** | |||||
| hg19:Y:22356900-C-T hg38:Y:20195014-C-T | DYZ19 | ** | |||||
| hg19:Y:22356909-C-T hg38:Y:20195023-C-T | DYZ19 | ** | |||||
| hg19:Y:22356911-T-C hg38:Y:20195025-T-C | DYZ19 | ** | |||||
| hg19:Y:22483897-T-A hg38:Y:20322011-T-A | DYZ19 | ** | |||||
| hg19:Y:22624579-A-T hg38:Y:20462693-A-T | ** | ||||||
| hg19:Y:22713044-G-A hg38:Y:20551158-G-A | ** | ||||||
| hg19:Y:22765551-A-G hg38:Y:20603665-A-G | ** | ||||||
| hg19:Y:22777042-C-T hg38:Y:20615156-C-T | ** | ||||||
| hg19:Y:22842184-C-A hg38:Y:20680298-C-A | ** | ||||||
| hg19:Y:22874219-G-C hg38:Y:20712333-G-C | ** | ||||||
| hg19:Y:22874220-A-C hg38:Y:20712334-A-C | ** | ||||||
| hg19:Y:22874230-A-G hg38:Y:20712344-A-G | ** | ||||||
| hg19:Y:22874232-C-T hg38:Y:20712346-C-T | FT257798 | ** | |||||
| hg19:Y:22874256-G-A hg38:Y:20712370-G-A | ** | ||||||
| hg19:Y:22874259-A-T hg38:Y:20712373-A-T | ** | ||||||
| hg19:Y:22874260-A-T hg38:Y:20712374-A-T | ** | ||||||
| hg19:Y:22874268-T-G hg38:Y:20712382-T-G | ** | ||||||
| hg19:Y:22874271-AGCC-A hg38:Y:20712385-AGCC-A | ** | ||||||
| hg19:Y:22874277-C-T hg38:Y:20712391-C-T | ** | ||||||
| hg19:Y:22874280-C-CCTT hg38:Y:20712394-C-CCTT | ** | ||||||
| hg19:Y:22874284-G-A hg38:Y:20712398-G-A | ** | ||||||
| hg19:Y:22874295-G-A hg38:Y:20712409-G-A | ** | ||||||
| hg19:Y:22874299-G-A hg38:Y:20712413-G-A | ** | ||||||
| hg19:Y:22874305-C-A hg38:Y:20712419-C-A | ** | ||||||
| hg19:Y:23045494-C-CA hg38:Y:20883608-C-CA | ** | ||||||
| hg19:Y:23065270-C-A hg38:Y:20903384-C-A | ** | ||||||
| hg19:Y:23065308-A-G hg38:Y:20903422-A-G | ** | ||||||
| hg19:Y:23087453-C-A hg38:Y:20925567-C-A | ** | ||||||
| hg19:Y:23144211-C-A hg38:Y:20982325-C-A | ** | ||||||
| hg19:Y:23332282-TG-T hg38:Y:21170396-TG-T | ** | ||||||
| hg19:Y:23401281-T-G hg38:Y:21239395-T-G | ** | ||||||
| hg19:Y:23623301-C-A hg38:Y:21461415-C-A | ** | ||||||
| hg19:Y:23787171-A-G hg38:Y:21625285-A-G | ** | ||||||
| hg19:Y:23848226-T-A hg38:Y:21686340-T-A | ** | ||||||
| hg38:Y:21750948-T-C | ** | ||||||
| hg19:Y:23997461-C-A hg38:Y:21851314-C-A | ** | ||||||
| hg19:Y:24070287-C-A hg38:Y:21924140-C-A | P3_b1 | ** | |||||
| hg19:Y:24244717-A-G hg38:Y:22098570-A-G | P3_b1 | ** | |||||
| hg19:Y:24276360-A-ACAG hg38:Y:22130213-A-ACAG | P3_b1 | ** | |||||
| hg19:Y:24373242-C-A hg38:Y:22227095-C-A | ** | ||||||
| hg19:Y:24446852-AATATATATAT-A hg38:Y:22300705-AATATATATAT-A | 15×AT | ** | |||||
| hg19:Y:24472462-T-C hg38:Y:22326315-T-C | ** | ||||||
| hg19:Y:26320966-A-G hg38:Y:24174819-A-G | P1_Y1 | ** | |||||
| hg19:Y:26358740-T-C hg38:Y:24212593-T-C | P1_Y1 | ** | |||||
| hg19:Y:27815614-T-G hg38:Y:25669467-T-G | P1_Y2 | ** | |||||
| hg19:Y:28478272-A-G hg38:Y:26332125-A-G | ** | ||||||
| hg19:Y:28480781-C-T hg38:Y:26334634-C-T | ** | ||||||
| hg19:Y:28484538-C-T hg38:Y:26338391-C-T | ** | ||||||
| hg19:Y:28538958-G-T hg38:Y:26392811-G-T | ** | ||||||
| hg19:Y:28605375-A-G hg38:Y:26459228-A-G | ** | ||||||
| hg38:Y:56825800-C-A | ** | ||||||
| hg19:Y:13488547-G-A hg38:Y:11332871-G-A | *** | ||||||
| hg19:Y:13488550-C-T hg38:Y:11332874-C-T | *** | ||||||
| hg19:Y:17196748-GTAGA-G hg38:Y:15084868-GTAGA-G | *** | ||||||
| hg38:Y:10661257-C-G,T | *** | ||||||
| hg19:Y:14777014-G-C hg38:Y:12665083-G-C | *** | ||||||
| hg19:Y:14777018-T-G hg38:Y:12665087-T-G | *** | ||||||
| hg19:Y:17419439-ATTTTTTTT-A hg38:Y:15307559-ATTTTTTTT-A | 25×T | *** | |||||
| hg19:Y:13488563-T-A hg38:Y:11332887-T-A | *** | ||||||
| hg19:Y:17038319-CTT-C,CT hg38:Y:14926439-CTT-C,CT | 13×T | *** | |||||
| hg38:Y:10849622-A-C | *** | ||||||
| hg19:Y:9524019-GTATATATA-G,GTATATA hg38:Y:9686410-GTATATATA-G,GTATATA | 21×TA | *** | |||||
| hg38:Y:10892535-C-A | *** | ||||||
| hg19:Y:21827606-CAAAA-C,CAAA hg38:Y:19665720-CAAAA-C,CAAA | 21×A | *** | |||||
| hg38:Y:10892528-C-T | *** | ||||||
| hg19:Y:18627914-C-A hg38:Y:16516034-C-A | *** | ||||||
| hg38:Y:10892514-A-ATGCCACTGCT | *** | ||||||
| hg19:Y:8270001-G-T hg38:Y:8401960-G-T | *** | ||||||
| hg19:Y:19412561-C-A hg38:Y:17300681-C-A | *** | ||||||
| hg19:Y:13488577-C-T hg38:Y:11332901-C-T | *** | ||||||
| hg19:Y:13488508-C-A hg38:Y:11332832-C-A | *** | ||||||
| hg19:Y:3991968-ACTCT-A,ACT hg38:Y:4123927-ACTCT-A,ACT | 9×CT | *** | |||||
| hg19:Y:6134523-A-G hg38:Y:6266482-A-G | *** | ||||||
| hg19:Y:8002104-C-A hg38:Y:8134063-C-A | *** | ||||||
| hg19:Y:9461960-G-A hg38:Y:9624351-G-A | *** | ||||||
| hg19:Y:9907487-C-A hg38:Y:10069878-C-A | *** | ||||||
| hg38:Y:10678612-C-A | *** | ||||||
| hg38:Y:10750807-T-C | *** | ||||||
| hg19:Y:13236471-CATAT-C hg38:Y:11080795-CATAT-C | *** | ||||||
| hg19:Y:13488507-C-G hg38:Y:11332831-C-G | *** | ||||||
| hg19:Y:13488522-C-T hg38:Y:11332846-C-T | *** | ||||||
| hg19:Y:13488526-G-A hg38:Y:11332850-G-A | *** | ||||||
| hg38:Y:11655695-G-T | DYZ17 | *** | |||||
| hg19:Y:13958620-AGAAG-A hg38:Y:11837914-AGAAG-A | *** | ||||||
| hg19:Y:14385214-C-T hg38:Y:12264510-C-T | *** | ||||||
| hg19:Y:15936597-AG-A hg38:Y:13824717-AG-A | *** | ||||||
| hg19:Y:19055378-G-T hg38:Y:16943498-G-T | *** | ||||||
| hg19:Y:28537056-T-C hg38:Y:26390909-T-C | *** | ||||||
| hg38:Y:56836610-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 298842 | 10115101 | 8237852 | 8096499 |
| Used in age calculations | 10115101 | 8237852 | 8096499 |
| Counts of SNPs | 2 | 2 |
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