Tree Position

R-M269 > L23 > L51 > Z2118 > ~18571755-G-A > S1161 > S1141 > A613 > BY11781 > BY38470

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
221412
19812024-T-G 17700144-T-G P5_Prx A*
24271457-G-A 22125310-G-A P3_b1 A*
26346318-C-T 24200171-C-T P1_Y1 A*
7591215-T-A 7723174-T-A YP1098 ZS1764 YY+
18610189-G-A 16498309-G-A BY122568 YY+
21980144-C-T 19818258-C-T BY136812 YY+
6912174-G-T 7044133-G-T BY62155 YY+
16288221-C-T 14176341-C-T BY106694 YY+
13907887-TTTTA-T 11787181-TTTTA-T +
14081752-T-G 11961046-T-G BY92848 YY+
14826118-A-T 12714185-A-T BY97812 YY12×T+
15514343-C-T 13402463-C-T BY102124 YY+
7474374-AAGAGAGAG-A 7606333-AAGAGAGAG-A IR1_L 21×AG*
14529116-C-T 12417317-C-T **
10935700-A-C **
10768951-T-C **
10778914-C-A **
10799440-C-CCCCAT **
10800892-C-A **
10802329-T-TC **
10840617-C-A **
10889251-G-GCCATTCCATTCCATT **
10892516-T-C **
10935689-G-C **
10943682-A-T **
10652171-G-A **
10947626-C-G **
10967675-C-G **
10971095-C-A **
14796031-A-C 12684102-A-C **
10983175-C-A **
14765171-G-T 12653240-G-T **
10992640-T-G **
10992649-T-C **
10992668-C-T FT409304 **
10992672-C-G **
10992681-TCACTA-T **
11000405-T-A **
10692729-C-T **
10072604-C-A 10234995-C-A **
10647701-G-T **
9474169-A-T 9636560-A-T **
8786696-G-T 8918655-G-T **
8799754-TCTCTCATAAGTGGGAGTTGAA-T 8931713-TCTCTCATAAGTGGGAGTTGAA-T **
8878805-G-T 9010764-G-T FT295590 **
8878818-G-T 9010777-G-T **
9056505-T-C **
9056565-T-A **
8983076-A-T 9145467-A-T **
9040926-ATATATATATATATATATATATATAT-A 9203317-ATATATATATATATATATATATATAT-A **
9063637-T-C 9226028-T-C **
9307532-G-T 9469923-G-T **
9429966-AAACTTTGAAAAAATTTTAGAAGAATGTATAACTAGAATAACC-A 9592357-AAACTTTGAAAAAATTTTAGAAGAATGTATAACTAGAATAACC-A **
9658024-T-TACAG 9820415-T-TACAG IR3_Prx **
11000480-T-TTCCACTCTCC **
9732215-C-A 9894606-C-A IR3_Prx **
9745905-CA-C 9908296-CA-C **
9765986-A-C 9928377-A-C **
9769099-C-G 9931490-C-G **
9939749-G-T 10102140-G-T **
9942889-T-C 10105280-T-C **
9968673-T-G 10131064-T-G **
9969665-C-A 10132056-C-A **
14796781-G-T 12684852-G-T **
9991146-G-A 10153537-G-A **
10031085-G-A 10193476-G-A **
10045204-G-C 10207595-G-C **
11000415-T-TTATAA **
11030180-T-G **
11026140-T-A **
14261578-T-A 12140872-T-A **
13987269-T-C 11866563-T-C **
13987270-G-A 11866564-G-A **
14067289-A-G 11946583-A-G **
14612927-C-G 12501125-C-G **
14093443-C-A 11972737-C-A **
14191620-A-G 12070914-A-G **
14195067-T-A 12074361-T-A **
14203555-G-A 12082849-G-A **
14227752-G-T 12107046-G-T **
14227762-G-T 12107056-G-T **
14250595-T-A 12129889-T-A **
14261597-GC-G 12140891-GC-G **
13937351-T-G 11816645-T-G **
14261605-G-A 12140899-G-A **
14261606-T-C 12140900-T-C **
14261607-G-C 12140901-G-C **
14261611-T-A 12140905-T-A **
14261614-T-C 12140908-T-C **
14584563-C-A 12472763-C-A **
14283440-T-A 12162734-T-A **
14384605-G-T 12263901-G-T **
14450110-A-T 12329383-A-T **
14451218-C-A 12330491-C-A **
14461249-T-C 12340522-T-C **
13960516-G-T 11839810-G-T **
14612939-C-A 12501137-C-A **
14529090-G-A 12417291-G-A **
13570860-C-A 11415184-C-A **
11031347-A-C 12027074-G-AFT344780 **
11034731-T-C **
13196690-C-A 11041014-C-A **
13197012-C-A 11041336-C-A **
8761634-G-A 8893593-G-A **
13322304-C-A 11166628-C-A **
13328655-C-A 11172979-C-A **
13385118-C-A 11229442-C-A **
13411234-C-A 11255558-C-A **
13411382-C-A 11255706-C-A **
13446050-G-T 11290374-G-T **
13601870-TGCTCACAGGTTTAAATCTATAGCAGGATATG-T 11446194-TGCTCACAGGTTTAAATCTATAGCAGGATATG-T **
13856612-G-T 11735906-G-T **
13604252-G-T 11448576-G-T **
14727239-C-A 12615307-C-A **
13604257-C-G 11448581-C-G **
13632867-C-G 11477191-C-G **
13710929-A-C 11555253-A-C **
14715750-G-C 12603817-G-C **
13712647-T-G 11556971-T-G **
11665141-A-C **
11671376-G-A **
13801384-G-T 11680678-G-T FT451635 **
13828392-G-C 11707686-G-C **
13255852-T-C 11100176-T-C **
13710925-A-G 11555249-A-G **
8697835-T-G 8829794-T-G **
5306572-C-A 5438531-C-A **
5097865-C-A 5229824-C-A **
5100310-C-G 5232269-C-G **
5108049-C-A 5240008-C-A **
5127196-C-G 5259155-C-G **
5134091-A-G 5266050-A-G **
5185261-T-A 5317220-T-A **
5189561-G-T 5321520-G-T **
5205303-T-C 5337262-T-C **
5221181-T-C 5353140-T-C **
5236372-G-T 5368331-G-T **
5264192-T-C 5396151-T-C **
5306585-C-A 5438544-C-A FT278922 **
5060997-A-C 5192956-A-C **
5367635-A-C 5499594-A-C **
5367687-C-T 5499646-C-T **
5409886-C-A 5541845-C-A **
5421235-C-A 5553194-C-A **
5524099-T-C 5656058-T-C **
5562211-T-G 5694170-T-G **
5562248-C-A 5694207-C-A **
5682156-G-A 5814115-G-A **
5682689-G-T 5814648-G-T **
5687583-A-G 5819542-A-G **
5720937-A-C 5852896-A-C **
5818515-C-A 5950474-C-A **
5097800-C-A 5229759-C-A **
4961635-T-A 5093594-T-A **
6038031-A-T 6169990-A-T **
4226107-G-C 4358066-G-C **
3560416-C-A 3692375-C-A **
3560791-C-A 3692750-C-A **
3599879-C-A 3731838-C-A **
3648525-A-C 3780484-A-C **
3851846-G-T 3983805-G-T **
4016224-A-G 4148183-A-G **
4020899-C-A 4152858-C-A **
4080933-A-G 4212892-A-G **
4088495-G-C 4220454-G-C **
4107548-C-G 4239507-C-G **
4129995-C-A 4261954-C-A **
4179247-C-G 4311206-C-G **
4316015-G-T 4447974-G-T **
4921433-T-G 5053392-T-G **
4351263-C-A 4483222-C-A **
4397806-TTTTTG-T 4529765-TTTTTG-T **
4522116-A-C 4654075-A-C **
4522166-A-T 4654125-A-T **
4563376-G-T 4695335-G-T **
4572378-C-A 4704337-C-A **
4604255-C-A 4736214-C-A **
4665091-A-G 4797050-A-G **
4766049-A-T 4898008-A-T **
4788413-A-T 4920372-A-T **
4908231-C-A 5040190-C-A **
4921431-A-T 5053390-A-T **
5870173-A-T 6002132-A-T **
6039475-G-T 6171434-G-T **
8085710-G-T 8217669-G-T **
7613829-AT-A 7745788-AT-A **
7301492-C-T 7433451-C-T **
7301509-G-C 7433468-G-C **
7310458-T-TG 7442417-T-TG **
7310467-A-T 7442426-A-T **
7310470-A-T 7442429-A-T **
7335712-T-C 7467671-T-C **
7342148-A-T 7474107-A-T **
7347677-C-A 7479636-C-A **
7487270-C-A 7619229-C-A IR1_L **
7536445-G-T 7668404-G-T **
7572876-A-C 7704835-A-C **
7754964-C-A 7886923-C-A **
7301477-T-C 7433436-T-C **
7969636-G-T 8101595-G-T **
7970274-G-C 8102233-G-C **
7984432-G-T 8116391-G-T **
7984433-C-T 8116392-C-T **
8044592-C-A 8176551-C-A **
8044600-T-C 8176559-T-C **
8044608-C-T 8176567-C-T **
8044609-A-G 8176568-A-G **
8044614-G-T 8176573-G-T **
8061699-A-C 8193658-A-C **
8074000-T-C 8205959-T-C **
14867184-T-G 12755254-T-G **
7301487-A-G 7433446-A-G **
7301476-A-C 7433435-A-C **
6039711-A-T 6171670-A-T **
7039514-G-T 7171473-G-T **
6040264-C-T 6172223-C-T **
6331942-G-T 6463901-G-T IR3_Dst **
6401011-A-G 6532970-A-G **
6434510-C-A 6566469-C-A **
6444720-T-G 6576679-T-G **
6491788-A-T 6623747-A-T **
6523766-T-C 6655725-T-C **
6523763-CTCTGCT-C 6655722-CTCTGCT-C **
6582318-C-G 6714277-C-G **
6642791-G-A 6774750-G-A **
6644731-A-T 6776690-A-T **
6666066-A-T 6798025-A-T **
7084344-A-G 7216303-A-G **
7269747-C-A 7401706-C-A **
7098542-A-C 7230501-A-C **
7111586-C-A 7243545-C-A **
7132619-G-T 7264578-G-T **
7132829-C-T 7264788-C-T **
7140447-C-A 7272406-C-A **
7148283-A-G 7280242-A-G **
7157047-G-T 7289006-G-T **
7182232-A-G 7314191-A-G **
7186476-A-T 7318435-A-T **
7197263-A-G 7329222-A-G **
7231359-C-A 7363318-C-A **
7254924-C-A 7386883-C-A **
8079225-T-C 8211184-T-C **
15109244-T-G 12997331-T-G **
14867189-G-T 12755259-G-T **
22000741-C-G 19838855-C-G **
21247955-G-C 19086069-G-C **
21380607-A-C 19218721-A-C **
21408456-C-A 19246570-C-A **
21468082-T-C 19306196-T-C **
21500294-C-A 19338408-C-A **
21573962-C-T 19412076-C-T **
21708461-A-C 19546575-A-C **
21747948-T-G 19586062-T-G **
21796431-A-G 19634545-A-G **
21840899-T-G 19679013-T-G **
21963896-G-T 19802010-G-T **
22013253-G-T 19851367-G-T **
21151782-T-G 18989896-T-G **
22091256-T-G 19929370-T-G **
22091261-T-G 19929375-T-G **
22252473-T-A 20090587-T-A DYZ19 **
22263917-T-C 20102031-T-C DYZ19 **
22303528-C-G 20141642-C-G DYZ19 **
22446098-A-T 20284212-A-T DYZ19 **
22592399-GCTTT-G 20430513-GCTTT-G **
22594508-A-G 20432622-A-G **
22651487-G-T 20489601-G-T **
22651491-G-C 20489605-G-C **
22801579-C-T 20639693-C-T **
22854393-A-T 20692507-A-T **
21237238-A-T 19075352-A-T **
21127585-T-TTA 18965699-T-TTA **
22884052-A-C 20722166-A-C **
20726424-C-A 18564538-C-A P4_Prx **
20228315-T-TACAG 18066429-T-TACAG P5_Dst **
20230153-A-AT 18068267-A-AT P5_Dst **
20434202-A-AT 18272316-A-AT P5_Dst 11×T**
20434299-G-A 18272413-G-A P5_Dst **
20434303-C-CA 18272417-C-CA P5_Dst **
20629012-C-CTTCT 18467126-C-CTTCT P4_Prx **
20685083-T-C 18523197-T-C P4_Prx **
20698340-T-G 18536454-T-G P4_Prx **
20698348-G-T 18536462-G-T P4_Prx **
20698366-G-T 18536480-G-T P4_Prx **
20700684-C-CT 18538798-C-CT P4_Prx **
20726439-C-G 18564553-C-G P4_Prx **
21106914-C-A 18945028-C-A **
20726475-C-A 18564589-C-A P4_Prx **
20726491-C-A 18564605-C-A P4_Prx **
20756741-T-C 18594855-T-C P4_Prx **
20793450-T-A 18631564-T-A P4_Prx **
20793451-G-TAC 18631565-G-TAC P4_Prx **
20793486-GTA-G 18631600-GTA-G P4_Prx **
20795958-G-T 18634072-G-T P4_Prx **
20796083-C-A 18634197-C-A P4_Prx **
20796091-G-C 18634205-G-C P4_Prx **
20796092-GA-G 18634206-GA-G P4_Prx **
20803033-T-A 18641147-T-A P4_Gap **
21009173-T-TTACGTAAG 18847287-T-TTACGTAAG P4_Dst **
22857544-G-T 20695658-G-T **
22884077-C-A 20722191-C-A **
19841177-A-AGACAG 17729297-A-AGACAG P5_Prx **
28657793-A-G 26511646-A-G **
27647266-C-G 25501119-C-G P1_Y2 **
27647275-C-G 25501128-C-G P1_Y2 **
27870192-T-G 25724045-T-G P1_Y2 **
27935938-A-G 25789791-A-G P1_Y2 **
28159981-T-G 26013834-T-G P1_b4 **
28464962-C-A 26318815-C-A **
28464970-C-A 26318823-C-A **
28479233-A-G 26333086-A-G **
28497238-T-A 26351091-T-A **
28594223-T-A 26448076-T-A **
28655458-C-A 26509311-C-A **
28688319-C-A 26542172-C-A **
27647232-C-A 25501085-C-A P1_Y2 **
28727816-G-A 26581669-G-A **
28742104-G-C 26595957-G-C **
28775425-G-T 26629278-G-T **
28776753-G-T 26630606-G-T **
28796984-T-A 26650837-T-A **
28812135-G-T 26665988-G-T **
28818753-C-A 26672606-C-A **
56771126-A-T **
56771159-G-GAATGT **
56826507-C-T **
56835368-C-A **
56841840-G-A **
27647250-C-A 25501103-C-A P1_Y2 **
27647216-C-A 25501069-C-A P1_Y2 **
22991228-G-T 20829342-G-T FTB64853 **
25937315-T-C 23791168-T-C P1_Y1 **
23106332-C-G 20944446-C-G **
23188525-G-T 21026639-G-T **
23200733-G-A 21038847-G-A **
23204823-T-C 21042937-T-C **
23204912-G-A 21043026-G-A **
23401362-T-G 21239476-T-G **
23438954-C-A 21277068-C-A **
23440540-C-G 21278654-C-G **
24402099-T-G 22255952-T-G **
24406389-AG-A 22260242-AG-A **
24432780-G-T 22286633-G-T **
24637972-A-AAGGAC 22491825-A-AAGGAC P3_t2 **
25988042-A-T 23841895-A-T P1_Y1 **
27647204-C-A 25501057-C-A P1_Y2 **
26045019-T-A 23898872-T-A P1_Y1 **
26055047-T-G 23908900-T-G P1_Y1 **
26055062-G-T 23908915-G-T P1_Y1 **
26055076-G-T 23908929-G-T P1_Y1 **
26055084-T-G 23908937-T-G P1_Y1 **
26182262-T-A 24036115-T-A P1_Y1 **
26273257-T-G 24127110-T-G P1_Y1 **
26284955-T-A 24138808-T-A P1_Y1 **
27397027-G-C 25250880-G-C P1_g3 **
27582210-C-A 25436063-C-A P1_Y2 **
27582232-C-A 25436085-C-A P1_Y2 **
27582247-C-A 25436100-C-A P1_Y2 **
20015548-C-G 17903668-C-G P5_Prx **
19834179-A-AACAG 17722299-A-AACAG P5_Prx **
14911029-C-A 12799096-C-A **
16228064-G-T 14116184-G-T **
16004299-T-C 13892419-T-C **
16034402-A-T 13922522-A-T **
16038982-G-C 13927102-G-C **
16063482-GC-G 13951602-GC-G **
16067068-C-A 13955188-C-A **
16067178-C-A 13955298-C-A **
16104368-CTT-C 13992488-CTT-C P8_Prx **
16146428-G-T 14034548-G-T P8_Dst **
16181265-T-C 14069385-T-C **
16216780-T-G 14104900-T-G **
16216785-G-T 14104905-G-T **
16228071-G-T 14116191-G-T **
15986419-G-A 13874539-G-A **
16297220-T-C 14185340-T-C **
16297417-A-C 14185537-A-C **
16345005-T-C 14233125-T-C **
16351825-C-A 14239945-C-A **
16355636-G-T 14243756-G-T **
16411297-T-A 14299417-T-A **
16427090-C-A 14315210-C-A **
16464836-A-G 14352956-A-G **
16478218-C-T 14366338-C-T **
16480793-C-T 14368913-C-T **
16492871-C-A 14380991-C-A **
16623210-C-T 14511330-C-T **
15987691-C-A 13875811-C-A **
15963827-C-A 13851947-C-A FTB60294 **
16816644-G-T 14704764-G-T **
15647801-G-T 13535921-G-T **
14916744-T-A 12804811-T-A **
14916759-C-TG 12804826-C-TG **
3382682-A-G 3514641-A-G **
15146996-C-A 13035083-C-A **
15423764-G-T 13311884-G-T **
15431993-A-C 13320113-A-C **
15605406-G-C 13493526-G-C **
15605446-A-C 13493566-A-C **
15605451-G-C 13493571-G-C **
15606549-C-A 13494669-C-A **
15631892-C-A 13520012-C-A **
15686003-C-A 13574123-C-A FT413626 **
15963608-T-C 13851728-T-C **
15687847-A-G 13575967-A-G **
15697015-A-G 13585135-A-G **
15730642-C-T 13618762-C-T **
15730647-A-G 13618767-A-G **
15732417-C-A 13620537-C-A **
15733536-T-C 13621656-T-C **
15735472-C-A 13623592-C-A **
15756568-A-T 13644688-A-T **
15792961-G-T 13681081-G-T **
15792973-G-T 13681093-G-T **
15881911-A-C 13770031-A-C **
15950526-T-C 13838646-T-C **
16704296-C-A 14592416-C-A **
16827533-C-A 14715653-C-A **
19775039-T-TCTGTC 17663159-T-TCTGTC P5_Prx **
19013871-G-T 16901991-G-T **
18316684-T-C 16204804-T-C P6_Prx **
18316700-G-C 16204820-G-C P6_Prx **
18539361-T-A 16427481-T-A **
18707986-C-G 16596106-C-G **
18738211-C-T 16626331-C-T FT163874 **
18753536-A-G 16641656-A-G **
18756231-G-T 16644351-G-T **
18869805-T-A 16757925-T-A **
18891234-G-C 16779354-G-C **
18924883-C-A 16813003-C-A **
18991009-T-C 16879129-T-C **
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17053229-T-TACAG 14941349-T-TACAG **
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18186113-G-T 16074233-G-T **
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17648436-C-A 15536556-C-A **
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18127917-A-T 16016037-A-T **
3550659-G-T 3682618-G-T **
4114786-G-C 4246745-G-C **
3345758-T-A 3477717-T-A **
3922798-C-A 4054757-C-A **
18361463-T-A 16249583-T-A P6_Prx **
13488852-G-T 11333176-G-T **
10785265-T-C **
56838985-A-T **
56838999-G-A **
10939692-T-C **
5221168-A-C 5353127-A-C **
20751847-T-C 18589961-T-C P4_Prx **
7310413-G-T 7442372-G-T **
16897635-C-A 14785755-C-A **
10889986-G-T **
10977107-C-A **
56847029-C-A **
10692754-C-T **
28645907-C-A 26499760-C-A **
10935620-T-C **
7310492-T-A 7442451-T-A **
56840934-C-A **
7939295-C-A 8071254-C-A **
17503942-G-T 15392062-G-T **
56830290-TTCCAC-T **
16688405-C-A 14576525-C-A **
26100556-G-T 23954409-G-T P1_Y1 **
13489483-C-G 11333807-C-G **
10939615-C-T **
16720043-C-A 14608163-C-A **
15309732-C-A 13197836-C-A **
17125158-T-TA 15013278-T-TA 11×A**
10983520-G-A FT439164 **
7197264-C-T 7329223-C-T **
10744491-T-C **
22800921-C-CT 20639035-C-CT 10×T**
24336419-T-C 22190272-T-C P3_t1 **
10968293-C-A **
21911013-C-A 19749127-C-A **
7269855-C-A 7401814-C-A **
7996934-C-A 8128893-C-A **
13570873-C-A 11415197-C-A **
3284180-C-A 3416139-C-A **
56836123-C-G **
10663475-A-C **
10939619-T-C **
6756907-TCA-T 6888866-TCA-T **
16926218-C-A 14814338-C-A **
14529070-A-G 12417271-A-G **
14529071-A-G 12417272-A-G **
14529089-T-C 12417290-T-C **
15109216-T-G 12997303-T-G **
7487281-C-A 7619240-C-A IR1_L **
10785273-C-T **
10935623-A-G **
19250711-AT-A 17138831-AT-A **
2708291-C-A 2840250-C-A **
14819674-CTTT-C 12707741-CTTT-C 15×T**
10807050-T-A **
21234947-C-A 19073061-C-A **
10663474-A-C **
10663479-G-C **
5221164-C-A 5353123-C-A **
19537949-C-A 17426069-C-A **
27791806-G-T 25645659-G-T P1_Y2 **
10896353-C-T **
10896362-CCAT-C **
10896368-CCT-C **
10939624-T-C **
10992681-T-C **
10744503-C-CCTTTAT **
11034408-C-A **
14295230-C-A 12174524-C-A **
14960462-C-A 12848537-C-A **
15788162-C-A 13676282-C-A **
28707372-C-A 26561225-C-A **
7084474-C-A 7216433-C-A **
6453912-C-A 6585871-C-A **
14658268-C-A 12546333-C-A **
10023781-C-A 10186172-C-A **
7111523-C-A 7243482-C-A **
17770389-C-A 15658509-C-A **
17349241-G-A 15237361-G-A **
5562824-C-A 5694783-C-A **
7045738-C-A 7177697-C-A **
21220944-C-A 19059058-C-A **
21092219-C-A 18930333-C-A **
15427541-G-A 13315661-G-A **
24638022-A-AC 22491875-A-AC P3_t2 **
11668903-C-A **
14076759-C-A 11956053-C-A **
22078089-C-A 19916203-C-A **
16336897-G-GTT 14225017-G-GTT 23×T**
13461044-T-A 11305368-T-A **
5221086-C-A 5353045-C-A **
15070446-CAAA-C 12958537-CAAA-C 19×A**
22871469-C-A 20709583-C-A **
17349228-C-T 15237348-C-T **
3276248-G-T 3408207-G-T **
6776261-C-A 6908220-C-A **
17349205-T-C 15237325-T-C **
17349242-G-C 15237362-G-C **
17349216-CA-C 15237336-CA-C **
10778811-C-T **
11034726-A-C **
4920958-G-T 5052917-G-T **
11034734-CATTCA-C **
16629359-C-A 14517479-C-A **
22775161-A-G 20613275-A-G **
2790502-C-A 2922461-C-A **
15803566-C-A 13691686-C-A **
10748005-C-A **
3546643-C-A 3678602-C-A **
10831537-GTTCCA-G **
23415342-A-T 21253456-A-T S27761 21×T**
20434303-C-A 18272417-C-A P5_Dst **
27484492-TTG-T 25338345-TTG-T P1_Y2 14×TG**
22263906-A-T 20102020-A-T DYZ19 **
11021658-A-T **
10770668-C-G BY29332 **
10770695-C-T **
10770696-T-A **
10851030-C-A **
15940299-T-C 13828419-T-C **
7152738-C-A 7284697-C-A **
58985105-A-G 56838958-A-G **
10831642-C-A **
10821871-C-G **
10760980-G-C **
10851083-T-G **
10884982-CACTG-C **
10884989-C-T **
11031622-ATTCCG-A **
16929658-C-A 14817778-C-A **
21802863-C-A 19640977-C-A **
10939711-G-C **
16146483-G-GA 14034603-G-GA P8_Dst **
20755571-CTT-C 18593685-CTT-C P4_Prx 15×T**
13228247-C-A 11072571-C-A FT441377 **
10684555-G-GTCCAT **
13461519-G-C 11305843-G-C **
22263908-T-C 20102022-T-C DYZ19 **
8333575-C-T 8465534-C-T **
58972710-G-A 56826563-G-A **
26078847-C-CTTAT 23932700-C-CTTAT P1_Y1 10×TTAT**
8874988-G-T 9006947-G-T **
8650096-GAAAA-G 8782055-GAAAA-G FGC13495 **
15323680-G-A 13211798-G-A **
5289090-TACAC-T 5421049-TACAC-T 19×AC**
7310428-C-T 7442387-C-T FT362653 **
5393362-CGGA-C 5525321-CGGA-C 10×GGA**
5937238-CTCTCTATA-C 6069197-CTCTCTATA-C **
13461534-C-A 11305858-C-A **
17782705-TTTA-T 15670825-TTTA-T 5×TTA**
13461554-G-T 11305878-G-T **
19377209-AGAGG-A 17265329-AGAGG-A 4×GAGG**
25995464-GTA-G 23849317-GTA-G P1_Y1 10×TA**
22775162-C-T 20613276-C-T **
27791892-T-C 25645745-T-C A6209 A6168 P1_Y2 **
13940857-AAGAGAG-A 11820151-AAGAGAG-A 18×AG**
5969194-C-A 6101153-C-A **
6918327-T-A 7050286-T-A **
7759142-TTC-T 7891101-TTC-T **
10023499-CTGT-C 10185890-CTGT-C 5×TGT**
17070852-TATA-T 14958972-TATA-T 5×ATA**
16305903-C-G 14194023-C-G **
10673825-C-T **
14036012-T-C 11915306-T-C **
13866765-G-T 11746059-G-T **
10789515-T-C **
10939649-G-T **
6910435-CTTTT-C 7042394-CTTTT-C 16×T**
15791012-C-A 13679132-C-A **
28345694-C-CAT 26199547-C-CAT P1_gr2 **
5021998-G-A 5153957-G-A **
28234468-TGC-T 26088321-TGC-T P1_b4 **
14986055-C-A 12874123-C-A **
28727791-C-A 26581644-C-A FT227723 **
8389599-C-A 8521558-C-A **
56771128-G-T **
10885246-C-A **
10889847-C-A **
7111528-C-A 7243487-C-A **
19732413-C-CA 17620533-C-CA P5_Prx **
15109719-G-T 12997806-G-T **
25954345-T-C 23808198-T-C P1_Y1 **
10888023-A-C **
13705495-G-T 11549819-G-T **
10785278-CA-C **
10939596-T-C **
10992819-C-A **
13710934-T-C 11555258-T-C **
27466735-C-CA 25320588-C-CA P1_Y2 **
26391628-C-A 24245481-C-A P1_Y1 **
18361467-C-A 16249587-C-A P6_Prx **
8398840-C-CAA 8530799-C-CAA 17×A**
3706834-C-A 3838793-C-A **
10785295-T-C **
10949919-C-CCATTG **
23801726-T-C 21639840-T-C **
23098808-C-A 20936922-C-A **
10845695-C-A **
10845696-C-T **
13993463-C-A 11872757-C-A **
14529081-A-T 12417282-A-T **
15497534-C-A 13385654-C-A **
10925591-CTCTGT-C **
10868838-A-C **
22775140-T-C 20613254-T-C **
10868843-C-T **
28463872-C-A 26317725-C-A **
7534643-CAAA-C 7666602-CAAA-C 17×A**
10956524-C-A **
10956551-C-T **
10956559-C-T **
10956563-C-T **
10956572-T-A **
10956578-C-T **
10956586-T-G **
10956598-C-A **
14285952-C-A 12165246-C-A **
16351933-G-T 14240053-G-T **
13976453-C-A 11855747-C-A **
14598460-C-A 12486660-C-A **
9963356-C-A 10125747-C-A **
19286434-T-G 17174554-T-G **
21935065-C-A 19773179-C-A **
14456140-C-A 12335413-C-A **
16184257-C-A 14072377-C-A **
6096988-C-A 6228947-C-A **
11035304-C-A **
28547364-C-A 26401217-C-A **
14088298-GAT-G 11967592-GAT-G **
11031580-C-A FT59723 **
10939628-A-T **
15399918-C-A 13288038-C-A **
18190605-C-A 16078725-C-A **
2683368-C-A 2815327-C-A **
56860632-G-T **
11015744-C-T FT189804 **
5870010-C-A 6001969-C-A **
3467237-C-A 3599196-C-A **
13521457-C-A 11365781-C-A **
14384630-C-A 12263926-C-A **
14949176-C-A 12837250-C-A **
17380021-G-T 15268141-G-T **
8142876-A-G 8274835-A-G **
10776722-C-A **
5888304-C-A 6020263-C-A **
10807879-C-A **
22091402-A-T 19929516-A-T **
11034729-C-A **
9678337-G-T 9840728-G-T IR3_Prx **
9032057-T-C 9194448-T-C **
16044797-C-A 13932917-C-A **
13943112-C-A 11822406-C-A **
2959972-C-A 3091931-C-A **
10940403-T-C **
56836128-C-CTGCAT **
10662380-C-A **
10781097-C-A **
9334117-C-A 9496508-C-A **
26275953-C-CTT 24129806-C-CTT P1_Y1 16×T**
21141402-C-A 18979516-C-A **
28574369-C-A 26428222-C-A **
16277872-C-A 14165992-C-A **
4370978-C-A 4502937-C-A **
7348793-C-A 7480752-C-A **
28623558-C-A 26477411-C-A **
14533459-C-A 12421660-C-A **
18232126-C-A 16120246-C-A **
56836176-C-A **
28484730-C-A 26338583-C-A **
6592453-C-A 6724412-C-A **
13958772-C-A 11838066-C-A **
8142883-A-G 8274842-A-G **
17070874-TA-T 14958994-TA-T 9×A**
10950868-C-A **
14529131-C-G 12417332-C-G **
10974133-C-A **
11037890-C-A **
17349264-C-G 15237384-C-G **
14501839-C-A 12390044-C-A **
11002230-C-A **
3345737-C-A 3477696-C-A **
13975817-C-A 11855111-C-A **
21361927-C-A 19200041-C-A **
3146672-A-AGTGT 3278631-A-AGTGT 21×GT**
7590471-G-T 7722430-G-T **
18522307-G-T 16410427-G-T P6_Dst **
3640802-T-C 3772761-T-C **
13466026-C-A 11310350-C-A **
2670828-G-T 2802787-G-T **
2670831-G-T 2802790-G-T **
2948978-T-C 3080937-T-C FT172257 **
2949023-T-C 3080982-T-C **
2978947-C-A 3110906-C-A **
3218290-C-A 3350249-C-A FT125500 **
3259802-G-T 3391761-G-T **
3273011-G-A 3404970-G-A **
3273107-C-G 3405066-C-G **
3273116-A-G 3405075-A-G **
11031861-C-A **
18682862-G-A 16570982-G-A **
18990387-C-A 16878507-C-A **
56771134-G-C **
34305-C-A **
4700358-C-A 4832317-C-A **
17840391-C-A 15728511-C-A **
7984457-T-C 8116416-T-C **
7984466-A-G 8116425-A-G **
10792873-C-A **
7264852-C-A 7396811-C-A **
10964114-C-A **
10800949-C-A **
9765980-C-A 9928371-C-A **
5221167-C-T 5353126-C-T **
24406286-G-T 22260139-G-T **
4433473-C-A 4565432-C-A **
5420430-C-A 5552389-C-A **
18928845-C-A 16816965-C-A **
4114776-A-G 4246735-A-G FT129763 **
17735583-C-G 15623703-C-G **
10851588-T-C **
14585780-G-T 12473980-G-T **
14539241-C-A 12427442-C-A **
15858351-C-A 13746471-C-A **
3218190-C-A 3350149-C-A **
3273036-C-A 3404995-C-A **
7182240-T-G 7314199-T-G **
18932659-T-C 16820779-T-C **
56860643-C-A **
10939608-A-T **
21714710-C-A 19552824-C-A **
14858652-C-T 12746718-C-T **
18578023-C-A 16466143-C-A **
4063142-C-A 4195101-C-A **
11015968-C-A **
16468418-C-A 14356538-C-A **
19055626-G-T 16943746-G-T **
11017776-A-C **
10864355-G-T **
7310430-GCTA-G 7442389-GCTA-G **
10842740-C-T **
7310453-A-T 7442412-A-T **
3218368-C-A 3350327-C-A **
10899224-C-A **
13488776-C-G 11333100-C-G **
23476234-C-A 21314348-C-A **
13488758-TC-T 11333082-TC-T **
3012877-C-A 3144836-C-A **
5708993-C-A 5840952-C-A **
6582370-C-A 6714329-C-A **
14174758-C-A 12054052-C-A **
23009922-G-T 20848036-G-T **
28510367-C-A 26364220-C-A **
15687869-C-A 13575989-C-A **
4700373-AG-A 4832332-AG-A **
11034746-C-T **
19847678-G-C 17735798-G-C P5_Prx **
28784589-C-A 26638442-C-A **
18756331-C-A 16644451-C-A **
23036678-CAAAA-C 20874792-CAAAA-C 21×A**
7705624-C-A 7837583-C-A **
10900126-C-T **
18190565-C-A 16078685-C-A **
13899341-G-T 11778635-G-T **
10876338-G-T **
16765498-C-A 14653618-C-A **
3093239-C-A 3225198-C-A **
20796097-AC-A 18634211-AC-A P4_Prx **
28707615-C-A 26561468-C-A **
10655221-G-T **
10980819-C-A **
3229857-C-A 3361816-C-A **
5755998-G-T 5887957-G-T **
17313708-A-G 15201828-A-G FT5674 **
13488765-C-AG 11333089-C-AG **
11026151-C-T **
8044595-C-T 8176554-C-T **
20802711-C-A 18640825-C-A P4_Gap **
10940181-C-A **
24600411-CCTCT-C 22454264-CCTCT-C P3_t2 8×CT**
7417561-CTTTT-C 7549520-CTTTT-C 14×T**
20700676-A-C 18538790-A-C P4_Prx **
9328991-C-A 9491382-C-A **
15106633-C-A 12994721-C-A **
18206678-C-A 16094798-C-A **
7757152-C-A 7889111-C-A **
7643040-C-A 7774999-C-A **
19544345-C-A 17432465-C-A **
8044573-T-G 8176532-T-G **
7310482-A-C 7442441-A-C **
10947517-C-A **
22775163-G-C 20613277-G-C **
15468631-C-A 13356751-C-A **
7310400-T-C 7442359-T-C **
21283396-C-A 19121510-C-A **
15201601-C-A 13089687-C-A **
2885498-G-T 3017457-G-T **
11672532-C-A **
15126370-C-A 13014457-C-A **
5084937-C-A 5216896-C-A **
7310401-G-A 7442360-G-A **
18329059-T-C 16217179-T-C P6_Prx **
22252480-C-A 20090594-C-A DYZ19 **
8333587-C-T 8465546-C-T ***
7730430-T-TGATAGATA 7862389-T-TGATAGATA 11×GATA***
5426408-G-T 5558367-G-T ***
56836497-G-T ***
13476666-C-A 11320990-C-A ***
13194223-C-A 11038547-C-A ***
10887976-C-T ***
6225989-CTTCTTTCT-C 6357948-CTTCTTTCT-C IR3_Dst 13×TTCT***
10887960-T-G ***
56834745-C-A ***
27967276-GTATA-G 25821129-GTATA-G P1_Y2 9×TA***
20028012-GTA-G 17916132-GTA-G P5_Prx 16×TA***
14880241-ATTTT-A 12768311-ATTTT-A 17×T***
28581630-G-GATAT 26435483-G-GATAT 19×AT***
11653787-G-A FT252868 ***
9945863-G-A 10108254-G-A 16×A***
13489606-C-T 11333930-C-T ***
7029415-ATC-A 7161374-ATC-A 8×TC***
11677468-G-T ***
7084233-TCA-T 7216192-TCA-T 9×CA***
14517297-G-T 12405498-G-T ***
9730488-A-G 9892879-A-G FGC53935 IR3_Prx ***
13482005-CAG-C 11326329-CAG-C ***
14742130-G-A 12630198-G-A ***
58982491-C-CA,G 56836344-C-CA,G ***
58974427-A-T 56828280-A-T ***
22698929-CTT-C 20537043-CTT-C 13×T***
14253254-CAAA-C,CAA 12132548-CAAA-C,CAA 14×A***
13813387-C-A 11692681-C-A ***
7532276-GTATATATATATATATATATATATATATATA-G 7664235-GTATATATATATATATATATATATATATATA-G 28×TA***
13450358-CT-C 11294682-CT-C ***
27791886-T-C 25645739-T-C P1_Y2 ***
13447147-CATTCCATTCT-C 11291471-CATTCCATTCT-C ***
13467743-C-G 11312067-C-G ***
28801612-G-A 26655465-G-A FT462191 ***
17895175-ATTTTTTT-A 15783295-ATTTTTTT-A 21×T***
8501522-T-C 8633481-T-C ***
10663543-G-T ***
10887966-C-A ***
10682571-C-A ***
21207454-C-A 19045568-C-A 4×ATGG***
8078615-G-T 8210574-G-T FTA1740 ***
19318373-C-A 17206493-C-A ***
9313668-C-T 9476059-C-T ***
16478272-A-T 14366392-A-T ***
56826968-T-TTGGCATTCCA ***
13488883-C-G 11333207-C-G ***
10682486-C-A ***
7436324-C-A 7568283-C-A ***
10751004-T-C ***
18838666-C-T 16726786-C-T ***
10888005-C-CCTGCT ***
10024212-TTC-T 10186603-TTC-T ***
10888011-C-G ***
10744322-C-A ***
18951836-C-A 16839956-C-A ***
10916175-G-T ***
10807273-T-C ***
17997344-A-G 15885464-A-G P7_Gap ***
56839605-G-T ***
18191812-G-T 16079932-G-T ***
10682485-T-G ***
8501559-C-T 8633518-C-T ***
8501547-C-T 8633506-C-T ***
23981833-ATGTG-A,ATG 21835686-ATGTG-A,ATG 17×TG***
8501532-C-T 8633491-C-T ***
10682547-C-T ***
10794650-C-A ***
56832856-C-T ***
10868870-T-C ***
24503106-CAA-C,CA 22356959-CAA-C,CA 16×A***
11014409-C-T ***
26908683-C-A 24762536-C-A P1_r3 ***
5687758-C-A 5819717-C-A ***
10757434-G-T ***
8501523-C-T 8633482-C-T ***
10776488-T-A ***
13258771-C-A 11103095-C-A ***
15717136-AT-A 13605256-AT-A 10×T***
10786422-A-T ***
10925602-A-T ***
14009566-C-A 11888860-C-A ***
10868865-T-A ***
10868875-T-A ***
15743841-C-A 13631961-C-A ***
15741862-G-T 13629982-G-T ***
5409728-TTTTCTTTCTTTCTTTC-T,TTTTCTTTC 5541687-TTTTCTTTCTTTCTTTC-T,TTTTCTTTC 18×TTTC***
10663501-T-A ***
10663496-T-A ***
10663492-C-T ***
19021026-CTTT-C 16909146-CTTT-C 15×T***
7000568-T-C 7132527-T-C ***
56844048-G-T ***
10999885-A-G ***
13464422-TC-T 11308746-TC-T ***
11643729-G-A BY89852 ***
10807315-G-A ***
10888017-C-T ***
17004633-G-A 14892753-G-A 9×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 221412988286580485537925202
Used in age calculations988286580485537925202
Counts of SNPs88
Variant counts last updated 2022-07-13 03:00:32.



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