MacLennan
FGC: TLW6C, FTDNA: 227811MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | FGC TLW6C |
---|---|---|---|---|---|---|---|
hg19:Y:3231578-A-G hg38:Y:3363537-A-G | FGC29780 | + | |||||
hg19:Y:4788621-C-A hg38:Y:4920580-C-A | FGC29781 | + | |||||
hg19:Y:4883605-T-C hg38:Y:5015564-T-C | FGC29782 | + | |||||
hg19:Y:7711197-G-A hg38:Y:7843156-G-A | FGC29783 | FGC29783 | Y | + | |||
hg19:Y:7888717-G-A hg38:Y:8020676-G-A | FGC29784 | FGC29784 | Y | Y | + | ||
hg19:Y:8525332-C-A hg38:Y:8657291-C-A | FGC29784 | FGC29785 | Y | Y | + | ||
hg19:Y:15273298-C-A hg38:Y:13161387-C-A | FGC29784 | FGC29786 | Y | Y | + | ||
hg19:Y:16924423-G-A hg38:Y:14812543-G-A | FGC29784 | FGC29787 | Y | Y | + | ||
hg19:Y:18177659-A-G hg38:Y:16065779-A-G | FGC29783 | FGC29788 | Y | Y | + | ||
hg19:Y:18997844-C-T hg38:Y:16885964-C-T | FGC29784 | FGC29789 | Y | Y | + | ||
hg19:Y:24403714-A-G hg38:Y:22257567-A-G | FGC29783 | FGC29790 | + | ||||
hg19:Y:14720664-TA-T hg38:Y:12608732-TA-T | FGC29784 | FGC29792 | + | ||||
hg19:Y:27265007-T-C hg38:Y:25118860-T-C | FGC29791 | P1_g3 | * | ||||
hg19:Y:13659320-T-C hg38:Y:11503644-T-C | DYZ17 | ** | |||||
hg19:Y:13420035-C-A hg38:Y:11264359-C-A | ** | ||||||
hg19:Y:22491404-C-A hg38:Y:20329518-C-A | DYZ19 | ** | |||||
hg19:Y:13487638-T-G hg38:Y:11331962-T-G | ** | ||||||
hg19:Y:13407167-C-G hg38:Y:11251491-C-G | ** | ||||||
hg19:Y:22459177-T-A hg38:Y:20297291-T-A | BY38867 | DYZ19 | ** | ||||
hg19:Y:13616457-G-T hg38:Y:11460781-G-T | ** | ||||||
hg19:Y:13387250-A-G hg38:Y:11231574-A-G | ** | ||||||
hg19:Y:6918475-G-A hg38:Y:7050434-G-A | ** | ||||||
hg19:Y:10013443-C-T hg38:Y:10175834-C-T | FGC79027 | ** | |||||
hg19:Y:13203957-T-C hg38:Y:11048281-T-C | ** | ||||||
hg19:Y:13529382-G-A hg38:Y:11373706-G-A | ** | ||||||
hg19:Y:22332761-A-C hg38:Y:20170875-A-C | DYZ19 | ** | |||||
hg19:Y:22332762-G-T hg38:Y:20170876-G-T | DYZ19 | ** | |||||
hg19:Y:22332781-G-C hg38:Y:20170895-G-C | DYZ19 | ** | |||||
hg19:Y:22332810-T-G hg38:Y:20170924-T-G | DYZ19 | ** | |||||
hg19:Y:13561233-A-AT hg38:Y:11405557-A-AT | ** | ||||||
hg19:Y:7270276-C-CTTTTT hg38:Y:7402235-C-CTTTTT | 25×T | ** | |||||
hg19:Y:13222013-GGGAAAGAA-G hg38:Y:11066337-GGGAAAGAA-G | ** | ||||||
hg19:Y:20326007-C-CTTTTTTTTTTT hg38:Y:18164121-C-CTTTTTTTTTTT | P5_Dst | 29×T | ** | ||||
hg19:Y:26463097-C-CTTTTTT hg38:Y:24316950-C-CTTTTTT | P1_Y1 | 36×T | ** | ||||
hg19:Y:22295848-C-G hg38:Y:20133962-C-G | DYZ19 | *** | |||||
hg19:Y:14991027-C-G hg38:Y:12879112-C-G | CTS3525 | *** | |||||
hg19:Y:28818242-A-G hg38:Y:26672095-A-G | *** | ||||||
hg19:Y:28818250-C-T hg38:Y:26672103-C-T | *** | ||||||
hg19:Y:13467063-G-T hg38:Y:11311387-G-T | *** | ||||||
hg19:Y:13129673-T-C hg38:Y:10619159-T-C | *** | ||||||
hg19:Y:13129675-A-T hg38:Y:10619161-A-T | *** | ||||||
hg19:Y:13129710-T-C hg38:Y:10619196-T-C | *** | ||||||
hg19:Y:22358856-G-A hg38:Y:20196970-G-A | DYZ19 | *** | |||||
hg19:Y:13203965-GA-G hg38:Y:11048289-GA-G | *** | ||||||
hg19:Y:13203955-CATCATT-GACAATA hg38:Y:11048279-CATCATT-GACAATA | *** | ||||||
hg19:Y:58981976-TTTCCAC-T hg38:Y:56835829-TTTCCAC-T | *** | ||||||
hg19:Y:22352949-C-A hg38:Y:20191063-C-A | DYZ19 | *** | |||||
hg19:Y:16340147-G-AA hg38:Y:14228267-G-AA | 22×A | *** | |||||
hg19:Y:22309415-A-C hg38:Y:20147529-A-C | DYZ19 | *** | |||||
hg19:Y:15171226-CTTTTTTT-C hg38:Y:13059312-CTTTTTTT-C | 19×T | *** | |||||
hg19:Y:13476008-G-A hg38:Y:11320332-G-A | *** | ||||||
hg19:Y:10029616-G-T hg38:Y:10192007-G-T | *** | ||||||
hg19:Y:22309239-C-T hg38:Y:20147353-C-T | DYZ19 | *** | |||||
hg19:Y:22365692-A-C hg38:Y:20203806-A-C | DYZ19 | *** | |||||
hg19:Y:22366768-C-T hg38:Y:20204882-C-T | DYZ19 | *** | |||||
hg19:Y:22366791-C-T hg38:Y:20204905-C-T | DYZ19 | *** | |||||
hg19:Y:22367193-C-T hg38:Y:20205307-C-T | DYZ19 | *** | |||||
hg19:Y:22367204-A-G hg38:Y:20205318-A-G | DYZ19 | *** | |||||
hg19:Y:22367227-T-G hg38:Y:20205341-T-G | DYZ19 | *** | |||||
hg19:Y:22367253-C-G hg38:Y:20205367-C-G | DYZ19 | *** | |||||
hg19:Y:58874495-C-A hg38:Y:56716376-G-T | *** | ||||||
hg19:Y:22480958-G-C hg38:Y:20319072-G-C | DYZ19 | *** | |||||
hg19:Y:22342970-T-G hg38:Y:20181084-T-G | DYZ19 | *** | |||||
hg19:Y:26370576-C-G hg38:Y:24224429-C-G | P1_Y1 | *** | |||||
hg19:Y:26370578-T-G hg38:Y:24224431-T-G | P1_Y1 | *** | |||||
hg19:Y:26370572-G-GAA hg38:Y:24224425-G-GAA | P1_Y1 | *** | |||||
hg19:Y:22342343-G-C hg38:Y:20180457-G-C | DYZ19 | *** | |||||
hg19:Y:22309320-T-A hg38:Y:20147434-T-A | DYZ19 | *** | |||||
hg19:Y:22365861-A-G hg38:Y:20203975-A-G | DYZ19 | *** | |||||
hg19:Y:17239290-T-TTATA hg38:Y:15127410-T-TTATA | 17×TA | *** | |||||
hg19:Y:9980884-GA-G hg38:Y:10143275-GA-G | *** | ||||||
hg19:Y:13203970-CCACCCCGCCTC-TAAT hg38:Y:11048294-CCACCCCGCCTC-TAAT | *** | ||||||
hg19:Y:58821131-GATTCTCT-CATTTTC hg38:Y:56769733-AGAGAATC-GAAAATG | *** | ||||||
hg19:Y:13616570-A-C hg38:Y:11460894-A-C | *** | ||||||
hg19:Y:58877158-G-T hg38:Y:56713713-C-A | *** | ||||||
hg19:Y:9952770-TG-CA hg38:Y:10115161-TG-CA | *** | ||||||
hg19:Y:13470168-AG-CC hg38:Y:11314492-AG-CC | *** | ||||||
hg19:Y:10090635-G-C hg38:Y:10253026-G-C | *** | ||||||
hg19:Y:22364523-T-A hg38:Y:20202637-T-A | DYZ19 | *** | |||||
hg19:Y:22366002-ACCAGAGG-TCCAGAGT hg38:Y:20204116-ACCAGAGG-TCCAGAGT | DYZ19 | *** | |||||
hg19:Y:22342748-A-C hg38:Y:20180862-A-C | DYZ19 | *** | |||||
hg19:Y:23901429-N-C hg38:Y:21739543-N-C | *** | ||||||
hg19:Y:22420848-A-G hg38:Y:20258962-A-G | DYZ19 | *** | |||||
hg19:Y:22420891-G-C hg38:Y:20259005-G-C | DYZ19 | *** | |||||
hg19:Y:22495918-G-A hg38:Y:20334032-G-A | DYZ19 | *** | |||||
hg19:Y:22502940-A-T hg38:Y:20341054-A-T | DYZ19 | *** | |||||
hg19:Y:22367107-C-A hg38:Y:20205221-C-A | DYZ19 | *** | |||||
hg19:Y:9952737-TT-GC hg38:Y:10115128-TT-GC | *** | ||||||
hg19:Y:13435360-ATA-GTC hg38:Y:11279684-ATA-GTC | *** | ||||||
hg19:Y:22367118-GA-AG hg38:Y:20205232-GA-AG | DYZ19 | *** | |||||
hg19:Y:22236364-T-C hg38:Y:20074478-T-C | DYZ19 | *** | |||||
hg19:Y:22366765-T-C hg38:Y:20204879-T-C | DYZ19 | *** | |||||
hg19:Y:22365977-GGTGG-TGTTA hg38:Y:20204091-GGTGG-TGTTA | DYZ19 | *** | |||||
hg19:Y:58903222-G-C hg38:Y:56687649-C-G | *** | ||||||
hg19:Y:13470158-AGG-GCC hg38:Y:11314482-AGG-GCC | *** | ||||||
hg19:Y:22309354-TAGAA-CAGAG hg38:Y:20147468-TAGAA-CAGAG | DYZ19 | *** | |||||
hg19:Y:24408991-ACCC-A hg38:Y:22262844-ACCC-A | 14×C | *** | |||||
hg19:Y:28819269-GGTA-TGGG hg38:Y:26673122-GGTA-TGGG | *** | ||||||
hg19:Y:22352931-A-T hg38:Y:20191045-A-T | DYZ19 | *** | |||||
hg19:Y:8972442-C-A hg38:Y:9134833-C-A | *** | ||||||
hg19:Y:22367126-G-C hg38:Y:20205240-G-C | DYZ19 | *** | |||||
hg19:Y:26508346-C-T hg38:Y:24362199-C-T | P1_Y1 | *** | |||||
hg19:Y:22337705-A-C hg38:Y:20175819-A-C | DYZ19 | *** | |||||
hg19:Y:58844956-G-C hg38:Y:56745915-C-G | *** | ||||||
hg19:Y:22245736-AG-A hg38:Y:20083850-AG-A | DYZ19 | *** | |||||
hg19:Y:22223603-A-C hg38:Y:20061717-A-C | DYZ19 | *** | |||||
hg19:Y:58844950-G-C hg38:Y:56745921-C-G | *** | ||||||
hg19:Y:58844970-T-C hg38:Y:56745901-A-G | *** | ||||||
hg19:Y:9939366-C-A hg38:Y:10101757-C-A | *** | ||||||
hg19:Y:7026596-C-G hg38:Y:7158555-C-G | *** | ||||||
hg19:Y:58908603-C-T hg38:Y:56682268-G-A | *** | ||||||
hg19:Y:13487111-C-GCCT hg38:Y:11331435-C-GCCT | *** | ||||||
hg19:Y:58877059-AGCGGA-C hg38:Y:56713807-TCCGCT-G | *** | ||||||
hg19:Y:58847217-G-T hg38:Y:56743654-C-A | *** | ||||||
hg19:Y:22421614-T-C hg38:Y:20259728-T-C | DYZ19 | *** | |||||
hg19:Y:22421634-A-T hg38:Y:20259748-A-T | DYZ19 | *** | |||||
hg19:Y:28405637-T-A hg38:Y:26259490-T-A | P1_gr2 | *** | |||||
hg19:Y:58830812-G-T hg38:Y:56760059-C-A | *** | ||||||
hg19:Y:58830841-G-T hg38:Y:56760030-C-A | *** | ||||||
hg19:Y:58874466-G-T hg38:Y:56716405-C-A | *** | ||||||
hg19:Y:58903546-T-C hg38:Y:56687325-A-G | *** | ||||||
hg19:Y:58904194-C-T hg38:Y:56686677-G-A | *** | ||||||
hg19:Y:58904203-G-A hg38:Y:56686668-C-T | *** | ||||||
hg19:Y:22292745-GT-CA hg38:Y:20130859-GT-CA | DYZ19 | *** | |||||
hg19:Y:10084308-TA-T hg38:Y:10246699-TA-T | *** | ||||||
hg19:Y:13864542-TATGTCATT-AATG hg38:Y:11743836-TATGTCATT-AATG | DYZ17 | *** | |||||
hg19:Y:22235087-A-AC hg38:Y:20073201-A-AC | DYZ19 | *** | |||||
hg19:Y:28784306-GGAAAA-G hg38:Y:26638159-GGAAAA-G | *** | ||||||
hg19:Y:58908589-TCAC-CCAT hg38:Y:56682279-GTGA-ATGG | *** | ||||||
hg19:Y:9956232-A-G hg38:Y:10118623-A-G | *** | ||||||
hg19:Y:9956228-G-A hg38:Y:10118619-G-A | FT262758 | *** | |||||
hg19:Y:9956214-T-C hg38:Y:10118605-T-C | *** | ||||||
hg19:Y:7573168-G-A hg38:Y:7705127-G-A | *** | ||||||
hg19:Y:7201588-T-C hg38:Y:7333547-T-C | *** | ||||||
hg19:Y:13472933-A-T hg38:Y:11317257-A-T | *** | ||||||
hg19:Y:13467068-T-A hg38:Y:11311392-T-A | *** | ||||||
hg19:Y:13472906-A-C hg38:Y:11317230-A-C | F18178 | *** | |||||
hg19:Y:13467057-T-G hg38:Y:11311381-T-G | *** | ||||||
hg19:Y:10104557-N-G hg38:Y:10266948-N-G | *** | ||||||
hg19:Y:13512468-T-A hg38:Y:11356792-T-A | *** | ||||||
hg19:Y:58912183-G-C hg38:Y:56678688-C-G | *** | ||||||
hg19:Y:10104560-N-C hg38:Y:10266951-N-C | *** | ||||||
hg19:Y:10104562-N-G hg38:Y:10266953-N-G | *** | ||||||
hg19:Y:10104559-N-T hg38:Y:10266950-N-T | *** | ||||||
hg19:Y:13932167-A-T hg38:Y:11811461-A-T | FT311449 | 11×AT | *** | ||||
hg19:Y:22267284-C-G hg38:Y:20105398-C-G | DYZ19 | *** | |||||
hg19:Y:13932166-T-A hg38:Y:11811460-T-A | *** | ||||||
hg19:Y:9781439-T-A hg38:Y:9943830-T-A | *** | ||||||
hg19:Y:22343623-C-A hg38:Y:20181737-C-A | DYZ19 | *** | |||||
hg19:Y:22343455-G-C hg38:Y:20181569-G-C | DYZ19 | *** | |||||
hg19:Y:3512063-G-C hg38:Y:3644022-G-C | *** | ||||||
hg19:Y:13467726-A-G hg38:Y:11312050-A-G | *** | ||||||
hg19:Y:22223563-C-A hg38:Y:20061677-C-A | DYZ19 | *** | |||||
hg19:Y:3930597-A-G hg38:Y:4062556-A-G | *** | ||||||
hg19:Y:4909906-A-G hg38:Y:5041865-A-G | *** | ||||||
hg19:Y:4910905-G-T hg38:Y:5042864-G-T | *** | ||||||
hg19:Y:6300157-G-T hg38:Y:6432116-G-T | IR3_Dst | *** | |||||
hg19:Y:6300158-C-T hg38:Y:6432117-C-T | IR3_Dst | *** | |||||
hg19:Y:6300159-A-G hg38:Y:6432118-A-G | IR3_Dst | *** | |||||
hg19:Y:9559492-T-G hg38:Y:9721883-T-G | IR3_Prx | 17×TG | *** | ||||
hg19:Y:9559510-G-A hg38:Y:9721901-G-A | IR3_Prx | *** | |||||
hg19:Y:9559520-G-A hg38:Y:9721911-G-A | IR3_Prx | *** | |||||
hg19:Y:9570176-G-A hg38:Y:9732567-G-A | IR3_Prx | *** | |||||
hg19:Y:9625114-T-A hg38:Y:9787505-T-A | IR3_Prx | *** | |||||
hg19:Y:9687636-C-T hg38:Y:9850027-C-T | IR3_Prx | *** | |||||
hg19:Y:9891067-T-C hg38:Y:10053458-T-C | *** | ||||||
hg19:Y:10084383-A-T hg38:Y:10246774-A-T | *** | ||||||
hg19:Y:10090758-G-T hg38:Y:10253149-G-T | *** | ||||||
hg19:Y:10092414-T-A hg38:Y:10254805-T-A | *** | ||||||
hg19:Y:10104558-N-A hg38:Y:10266949-N-A | *** | ||||||
hg19:Y:13407200-G-A hg38:Y:11251524-G-A | *** | ||||||
hg19:Y:13419968-T-A hg38:Y:11264292-T-A | *** | ||||||
hg19:Y:13463597-G-A hg38:Y:11307921-G-A | *** | ||||||
hg19:Y:13472916-T-A hg38:Y:11317240-T-A | *** | ||||||
hg19:Y:13485345-G-C hg38:Y:11329669-G-C | *** | ||||||
hg19:Y:13487885-C-T hg38:Y:11332209-C-T | *** | ||||||
hg19:Y:13701985-A-C hg38:Y:11546309-A-C | DYZ17 | *** | |||||
hg19:Y:13728333-A-T hg38:Y:11572657-A-T | DYZ17 | *** | |||||
hg19:Y:15296073-T-C hg38:Y:13184172-T-C | *** | ||||||
hg19:Y:16140962-C-T hg38:Y:14029082-C-T | P8_Dst | *** | |||||
hg19:Y:16996806-T-C hg38:Y:14884926-T-C | *** | ||||||
hg19:Y:18330808-G-A hg38:Y:16218928-G-A | P6_Prx | *** | |||||
hg19:Y:18363390-T-C hg38:Y:16251510-T-C | P6_Prx | *** | |||||
hg19:Y:18363398-T-C hg38:Y:16251518-T-C | P6_Prx | *** | |||||
hg19:Y:18363399-C-T hg38:Y:16251519-C-T | P6_Prx | *** | |||||
hg19:Y:18463312-C-T hg38:Y:16351432-C-T | P6_Dst | *** | |||||
hg19:Y:19600272-C-T hg38:Y:17488392-C-T | P5_Prx | *** | |||||
hg19:Y:19646378-C-G hg38:Y:17534498-C-G | P5_Prx | *** | |||||
hg19:Y:19662172-T-A hg38:Y:17550292-T-A | P5_Prx | *** | |||||
hg19:Y:19662177-A-G hg38:Y:17550297-A-G | P5_Prx | *** | |||||
hg19:Y:19663063-T-G hg38:Y:17551183-T-G | P5_Prx | *** | |||||
hg19:Y:19769640-A-C hg38:Y:17657760-A-C | P5_Prx | *** | |||||
hg19:Y:19769643-C-T hg38:Y:17657763-C-T | P5_Prx | *** | |||||
hg19:Y:19769645-A-C hg38:Y:17657765-A-C | P5_Prx | *** | |||||
hg19:Y:19774427-A-T hg38:Y:17662547-A-T | P5_Prx | *** | |||||
hg19:Y:19803210-A-T hg38:Y:17691330-A-T | P5_Prx | *** | |||||
hg19:Y:19803235-C-T hg38:Y:17691355-C-T | P5_Prx | *** | |||||
hg19:Y:19803237-A-G hg38:Y:17691357-A-G | P5_Prx | *** | |||||
hg19:Y:20009310-T-A hg38:Y:17897430-T-A | P5_Prx | *** | |||||
hg19:Y:20104706-A-G hg38:Y:17992826-A-G | P5_Dst | *** | |||||
hg19:Y:20125108-T-C hg38:Y:18013228-T-C | P5_Dst | *** | |||||
hg19:Y:20133236-A-G hg38:Y:18021356-A-G | P5_Dst | *** | |||||
hg19:Y:20133238-A-C hg38:Y:18021358-A-C | P5_Dst | *** | |||||
hg19:Y:20255677-C-A hg38:Y:18093791-C-A | P5_Dst | *** | |||||
hg19:Y:20420253-C-G hg38:Y:18258367-C-G | P5_Dst | *** | |||||
hg19:Y:20420257-A-G hg38:Y:18258371-A-G | P5_Dst | *** | |||||
hg19:Y:20420270-A-T hg38:Y:18258384-A-T | P5_Dst | *** | |||||
hg19:Y:20580377-A-T hg38:Y:18418491-A-T | P5_Dst | *** | |||||
hg19:Y:20580382-C-G hg38:Y:18418496-C-G | P5_Dst | *** | |||||
hg19:Y:20609877-T-C hg38:Y:18447991-T-C | P5_Dst | *** | |||||
hg19:Y:20688364-A-T hg38:Y:18526478-A-T | P4_Prx | *** | |||||
hg19:Y:20693261-C-T hg38:Y:18531375-C-T | P4_Prx | *** | |||||
hg19:Y:21004289-G-A hg38:Y:18842403-G-A | P4_Dst | *** | |||||
hg19:Y:21208751-C-A hg38:Y:19046865-C-A | *** | ||||||
hg19:Y:21829989-G-A hg38:Y:19668103-G-A | *** | ||||||
hg19:Y:22223545-C-A hg38:Y:20061659-C-A | DYZ19 | *** | |||||
hg19:Y:22224146-A-T hg38:Y:20062260-A-T | DYZ19 | *** | |||||
hg19:Y:22231955-G-C hg38:Y:20070069-G-C | DYZ19 | *** | |||||
hg19:Y:22231959-A-G hg38:Y:20070073-A-G | DYZ19 | *** | |||||
hg19:Y:22231961-A-G hg38:Y:20070075-A-G | DYZ19 | *** | |||||
hg19:Y:22231973-A-T hg38:Y:20070087-A-T | DYZ19 | *** | |||||
hg19:Y:22234726-T-C hg38:Y:20072840-T-C | DYZ19 | *** | |||||
hg19:Y:22245071-G-A hg38:Y:20083185-G-A | DYZ19 | *** | |||||
hg19:Y:22267273-A-G hg38:Y:20105387-A-G | DYZ19 | *** | |||||
hg19:Y:22268266-C-G hg38:Y:20106380-C-G | DYZ19 | *** | |||||
hg19:Y:22309681-A-G hg38:Y:20147795-A-G | DYZ19 | *** | |||||
hg19:Y:22309762-T-C hg38:Y:20147876-T-C | DYZ19 | *** | |||||
hg19:Y:22309791-T-C hg38:Y:20147905-T-C | DYZ19 | *** | |||||
hg19:Y:22324815-G-A hg38:Y:20162929-G-A | DYZ19 | *** | |||||
hg19:Y:22332536-T-G hg38:Y:20170650-T-G | DYZ19 | *** | |||||
hg19:Y:22332799-A-C hg38:Y:20170913-A-C | DYZ19 | *** | |||||
hg19:Y:22332815-T-C hg38:Y:20170929-T-C | DYZ19 | *** | |||||
hg19:Y:22332819-G-A hg38:Y:20170933-G-A | DYZ19 | *** | |||||
hg19:Y:22332822-T-A hg38:Y:20170936-T-A | DYZ19 | *** | |||||
hg19:Y:22332823-T-G hg38:Y:20170937-T-G | DYZ19 | *** | |||||
hg19:Y:22332826-T-A hg38:Y:20170940-T-A | DYZ19 | *** | |||||
hg19:Y:22332827-T-G hg38:Y:20170941-T-G | DYZ19 | *** | |||||
hg19:Y:22332835-A-C hg38:Y:20170949-A-C | DYZ19 | *** | |||||
hg19:Y:22332836-T-A hg38:Y:20170950-T-A | DYZ19 | *** | |||||
hg19:Y:22332849-T-A hg38:Y:20170963-T-A | DYZ19 | *** | |||||
hg19:Y:22337554-G-A hg38:Y:20175668-G-A | DYZ19 | *** | |||||
hg19:Y:22342783-A-C hg38:Y:20180897-A-C | DYZ19 | *** | |||||
hg19:Y:22342847-C-T hg38:Y:20180961-C-T | DYZ19 | *** | |||||
hg19:Y:22343312-A-T hg38:Y:20181426-A-T | DYZ19 | *** | |||||
hg19:Y:22343313-G-A hg38:Y:20181427-G-A | DYZ19 | *** | |||||
hg19:Y:22343314-T-C hg38:Y:20181428-T-C | DYZ19 | *** | |||||
hg19:Y:22343603-T-G hg38:Y:20181717-T-G | FGC80736 | DYZ19 | *** | ||||
hg19:Y:22344488-A-T hg38:Y:20182602-A-T | DYZ19 | *** | |||||
hg19:Y:22364450-A-T hg38:Y:20202564-A-T | DYZ19 | *** | |||||
hg19:Y:22366488-T-A hg38:Y:20204602-T-A | DYZ19 | *** | |||||
hg19:Y:22367074-T-G hg38:Y:20205188-T-G | DYZ19 | *** | |||||
hg19:Y:22367929-C-G hg38:Y:20206043-C-G | DYZ19 | *** | |||||
hg19:Y:22367956-G-T hg38:Y:20206070-G-T | DYZ19 | *** | |||||
hg19:Y:22421604-T-A hg38:Y:20259718-T-A | DYZ19 | *** | |||||
hg19:Y:22456919-C-T hg38:Y:20295033-C-T | DYZ19 | *** | |||||
hg19:Y:22456947-C-G hg38:Y:20295061-C-G | DYZ19 | *** | |||||
hg19:Y:22495902-A-G hg38:Y:20334016-A-G | DYZ19 | *** | |||||
hg19:Y:22499018-C-G hg38:Y:20337132-C-G | DYZ19 | *** | |||||
hg19:Y:22503789-T-C hg38:Y:20341903-T-C | DYZ19 | *** | |||||
hg19:Y:22504362-G-T hg38:Y:20342476-G-T | DYZ19 | *** | |||||
hg19:Y:22637374-C-A hg38:Y:20475488-C-A | *** | ||||||
hg19:Y:24539522-C-T hg38:Y:22393375-C-T | P3_t2 | *** | |||||
hg19:Y:25207822-C-A hg38:Y:23061675-C-A | P2_r1 | 51×A | *** | ||||
hg19:Y:25207932-G-T hg38:Y:23061785-G-T | P2_r1 | *** | |||||
hg19:Y:25519801-T-C hg38:Y:23373654-T-C | P1_gr1 | *** | |||||
hg19:Y:25519816-T-C hg38:Y:23373669-T-C | P1_gr1 | *** | |||||
hg19:Y:25519825-C-A hg38:Y:23373678-C-A | P1_gr1 | *** | |||||
hg19:Y:25553079-G-T hg38:Y:23406932-G-T | P1_gr1 | *** | |||||
hg19:Y:25870933-G-A hg38:Y:23724786-G-A | P1_Y1 | *** | |||||
hg19:Y:25870936-G-C hg38:Y:23724789-G-C | P1_Y1 | *** | |||||
hg19:Y:25923656-T-G hg38:Y:23777509-T-G | P1_Y1 | *** | |||||
hg19:Y:25958124-A-T hg38:Y:23811977-A-T | P1_Y1 | *** | |||||
hg19:Y:25958128-A-G hg38:Y:23811981-A-G | P1_Y1 | *** | |||||
hg19:Y:26067818-C-T hg38:Y:23921671-C-T | P1_Y1 | *** | |||||
hg19:Y:26070002-G-C hg38:Y:23923855-G-C | P1_Y1 | *** | |||||
hg19:Y:26143716-T-C hg38:Y:23997569-T-C | P1_Y1 | *** | |||||
hg19:Y:26216109-T-G hg38:Y:24069962-T-G | P1_Y1 | *** | |||||
hg19:Y:26216113-T-G hg38:Y:24069966-T-G | P1_Y1 | *** | |||||
hg19:Y:26257713-G-A hg38:Y:24111566-G-A | P1_Y1 | *** | |||||
hg19:Y:26257716-A-C hg38:Y:24111569-A-C | P1_Y1 | *** | |||||
hg19:Y:26370558-T-C hg38:Y:24224411-T-C | P1_Y1 | *** | |||||
hg19:Y:26370559-G-A hg38:Y:24224412-G-A | P1_Y1 | *** | |||||
hg19:Y:26370560-T-C hg38:Y:24224413-T-C | P1_Y1 | *** | |||||
hg19:Y:27134162-A-G hg38:Y:24988015-A-G | P1_g3 | *** | |||||
hg19:Y:27265659-A-T hg38:Y:25119512-A-T | P1_g3 | *** | |||||
hg19:Y:27407169-T-G hg38:Y:25261022-T-G | P1_g3 | *** | |||||
hg19:Y:27407202-A-T hg38:Y:25261055-A-T | P1_g3 | *** | |||||
hg19:Y:27407207-T-G hg38:Y:25261060-T-G | P1_g3 | *** | |||||
hg19:Y:27407235-A-G hg38:Y:25261088-A-G | P1_g3 | *** | |||||
hg19:Y:27487300-G-T hg38:Y:25341153-G-T | P1_Y2 | *** | |||||
hg19:Y:27487308-A-G hg38:Y:25341161-A-G | P1_Y2 | *** | |||||
hg19:Y:27487313-G-T hg38:Y:25341166-G-T | P1_Y2 | *** | |||||
hg19:Y:27851044-G-A hg38:Y:25704897-G-A | P1_Y2 | *** | |||||
hg19:Y:27851093-G-A hg38:Y:25704946-G-A | P1_Y2 | *** | |||||
hg19:Y:27870440-T-C hg38:Y:25724293-T-C | P1_Y2 | *** | |||||
hg19:Y:27870447-T-G hg38:Y:25724300-T-G | P1_Y2 | *** | |||||
hg19:Y:27870448-C-T hg38:Y:25724301-C-T | P1_Y2 | *** | |||||
hg19:Y:27870482-T-G hg38:Y:25724335-T-G | P1_Y2 | *** | |||||
hg19:Y:27922957-A-T hg38:Y:25776810-A-T | P1_Y2 | *** | |||||
hg19:Y:27923099-T-C hg38:Y:25776952-T-C | P1_Y2 | *** | |||||
hg19:Y:27923100-G-A hg38:Y:25776953-G-A | P1_Y2 | *** | |||||
hg19:Y:27923101-A-G hg38:Y:25776954-A-G | P1_Y2 | *** | |||||
hg19:Y:27923102-C-T hg38:Y:25776955-C-T | P1_Y2 | *** | |||||
hg19:Y:28039170-C-A hg38:Y:25893023-C-A | P1_Y2 | *** | |||||
hg19:Y:28107457-T-C hg38:Y:25961310-T-C | P1_Y2 | *** | |||||
hg19:Y:28107484-G-A hg38:Y:25961337-G-A | P1_Y2 | *** | |||||
hg19:Y:28107486-T-C hg38:Y:25961339-T-C | P1_Y2 | *** | |||||
hg19:Y:28108404-G-A hg38:Y:25962257-G-A | P1_Y2 | *** | |||||
hg19:Y:28491120-A-C hg38:Y:26344973-A-C | *** | ||||||
hg19:Y:28802768-C-G hg38:Y:26656621-C-G | *** | ||||||
hg19:Y:28818189-G-C hg38:Y:26672042-G-C | *** | ||||||
hg19:Y:58823275-C-T hg38:Y:56767596-G-A | *** | ||||||
hg19:Y:58824546-G-T hg38:Y:56766325-C-A | *** | ||||||
hg19:Y:58824561-T-G hg38:Y:56766310-A-C | *** | ||||||
hg19:Y:58828968-T-C hg38:Y:56761903-A-G | *** | ||||||
hg19:Y:58828971-C-T hg38:Y:56761900-G-A | *** | ||||||
hg19:Y:58830836-T-A hg38:Y:56760035-A-T | *** | ||||||
hg19:Y:58832664-G-A hg38:Y:56758207-C-T | *** | ||||||
hg19:Y:58832674-C-A hg38:Y:56758197-G-T | *** | ||||||
hg19:Y:58840087-T-A hg38:Y:56750784-A-T | *** | ||||||
hg19:Y:58840097-G-A hg38:Y:56750774-C-T | *** | ||||||
hg19:Y:58840100-T-C hg38:Y:56750771-A-G | *** | ||||||
hg19:Y:58840105-A-C hg38:Y:56750766-T-G | *** | ||||||
hg19:Y:58840131-A-C hg38:Y:56750740-T-G | *** | ||||||
hg19:Y:58840155-T-C hg38:Y:56750716-A-G | *** | ||||||
hg19:Y:58840161-A-C hg38:Y:56750710-T-G | *** | ||||||
hg19:Y:58840170-T-C hg38:Y:56750701-A-G | *** | ||||||
hg19:Y:58840212-T-A hg38:Y:56750659-A-T | *** | ||||||
hg19:Y:58844904-G-T hg38:Y:56745967-C-A | *** | ||||||
hg19:Y:58845214-A-C hg38:Y:56745657-T-G | *** | ||||||
hg19:Y:58847200-G-C hg38:Y:56743671-C-G | *** | ||||||
hg19:Y:58847269-G-C hg38:Y:56743602-C-G | *** | ||||||
hg19:Y:58848437-C-T hg38:Y:56742434-G-A | *** | ||||||
hg19:Y:58848444-A-C hg38:Y:56742427-T-G | *** | ||||||
hg19:Y:58848445-T-C hg38:Y:56742426-A-G | *** | ||||||
hg19:Y:58848462-C-T hg38:Y:56742409-G-A | *** | ||||||
hg19:Y:58855652-G-C hg38:Y:56735219-C-G | *** | ||||||
hg19:Y:58861657-T-A hg38:Y:56729214-A-T | *** | ||||||
hg19:Y:58864018-A-T hg38:Y:56726853-T-A | *** | ||||||
hg19:Y:58876126-T-A hg38:Y:56714745-A-T | *** | ||||||
hg19:Y:58876136-G-A hg38:Y:56714735-C-T | *** | ||||||
hg19:Y:58876160-G-C hg38:Y:56714711-C-G | *** | ||||||
hg19:Y:58877159-A-C hg38:Y:56713712-T-G | *** | ||||||
hg19:Y:58879788-C-T hg38:Y:56711083-G-A | *** | ||||||
hg19:Y:58880932-T-C hg38:Y:56709939-A-G | *** | ||||||
hg19:Y:58880934-G-A hg38:Y:56709937-C-T | *** | ||||||
hg19:Y:58882188-T-C hg38:Y:56708683-A-G | *** | ||||||
hg19:Y:58886141-C-T hg38:Y:56704730-G-A | *** | ||||||
hg19:Y:58886147-C-T hg38:Y:56704724-G-A | *** | ||||||
hg19:Y:58890017-C-A hg38:Y:56700854-G-T | *** | ||||||
hg19:Y:58891824-A-C hg38:Y:56699047-T-G | *** | ||||||
hg19:Y:58904182-A-C hg38:Y:56686689-T-G | *** | ||||||
hg19:Y:58904192-G-C hg38:Y:56686679-C-G | *** | ||||||
hg19:Y:58908501-C-A hg38:Y:56682370-G-T | *** | ||||||
hg19:Y:58908512-A-T hg38:Y:56682359-T-A | *** | ||||||
hg19:Y:13140153-CTCCAT-C hg38:Y:10629639-CTCCAT-C | 12×TCCAT | *** | |||||
hg19:Y:22244926-GA-G hg38:Y:20083040-GA-G | DYZ19 | *** | |||||
hg19:Y:13287973-ATA-CTC hg38:Y:11132297-ATA-CTC | *** | ||||||
hg19:Y:2793170-ATT-A hg38:Y:2925129-ATT-A | *** | ||||||
hg19:Y:2810366-A-ATTTTTTT hg38:Y:2942325-A-ATTTTTTT | 23×T | *** | |||||
hg19:Y:3205858-C-CAAAAAA hg38:Y:3337817-C-CAAAAAA | 15×A | *** | |||||
hg19:Y:3878644-C-CAAA hg38:Y:4010603-C-CAAA | 15×A | *** | |||||
hg19:Y:3878659-A-AAAG hg38:Y:4010618-A-AAAG | *** | ||||||
hg19:Y:3930579-ATATA-GTGTG hg38:Y:4062538-ATATA-GTGTG | *** | ||||||
hg19:Y:6089764-G-GTTTTTTTTTTT hg38:Y:6221723-G-GTTTTTTTTTTT | 31×T | *** | |||||
hg19:Y:7201570-TCCCTTCCA-CCCCCTCCC hg38:Y:7333529-TCCCTTCCA-CCCCCTCCC | *** | ||||||
hg19:Y:8160178-C-CAAAAAAAAAAAAA hg38:Y:8292137-C-CAAAAAAAAAAAAA | 20×A | *** | |||||
hg19:Y:8184338-AATGTTATAAACACTCTG-A hg38:Y:8316297-AATGTTATAAACACTCTG-A | *** | ||||||
hg19:Y:10084390-G-GA hg38:Y:10246781-G-GA | *** | ||||||
hg19:Y:10084395-A-AT hg38:Y:10246786-A-AT | *** | ||||||
hg19:Y:13405153-TT-A hg38:Y:11249477-TT-A | *** | ||||||
hg19:Y:13448633-GCATTCCATTCCATTCC-G hg38:Y:11292957-GCATTCCATTCCATTCC-G | 13×CATTC | *** | |||||
hg19:Y:13454832-TATTCC-T hg38:Y:11299156-TATTCC-T | *** | ||||||
hg19:Y:13456019-GATTCCATTCCATTCCATTCC-G hg38:Y:11300343-GATTCCATTCCATTCCATTCC-G | 11×ATTCC | *** | |||||
hg19:Y:13467771-CA-C hg38:Y:11312095-CA-C | *** | ||||||
hg19:Y:13472916-TAG-AAC hg38:Y:11317240-TAG-AAC | *** | ||||||
hg19:Y:13472930-CTGA-TTGT hg38:Y:11317254-CTGA-TTGT | *** | ||||||
hg19:Y:13484458-TAAT-CAAA hg38:Y:11328782-TAAT-CAAA | *** | ||||||
hg19:Y:13487635-TGCT-CGCG hg38:Y:11331959-TGCT-CGCG | *** | ||||||
hg19:Y:13488959-GCCCA-TCACC hg38:Y:11333283-GCCCA-TCACC | *** | ||||||
hg19:Y:13531753-C-CACGAAA hg38:Y:11376077-C-CACGAAA | 23×A | *** | |||||
hg19:Y:13535664-TAT-CAC hg38:Y:11379988-TAT-CAC | *** | ||||||
hg19:Y:13545271-CAAAGAAT-AAAA hg38:Y:11389595-CAAAGAAT-AAAA | *** | ||||||
hg19:Y:13864559-T-TGGAAC hg38:Y:11743853-T-TGGAAC | DYZ17 | *** | |||||
hg19:Y:13932166-TA-AT hg38:Y:11811460-TA-AT | *** | ||||||
hg19:Y:16031378-A-ATC hg38:Y:13919498-A-ATC | *** | ||||||
hg19:Y:16140961-CC-TT hg38:Y:14029081-CC-TT | P8_Dst | *** | |||||
hg19:Y:19569882-CA-T hg38:Y:17458002-CA-T | P5_Prx | *** | |||||
hg19:Y:19600260-CTA-TTG hg38:Y:17488380-CTA-TTG | P5_Prx | *** | |||||
hg19:Y:19600283-T-TA hg38:Y:17488403-T-TA | P5_Prx | *** | |||||
hg19:Y:19774419-TTC-CTG hg38:Y:17662539-TTC-CTG | P5_Prx | *** | |||||
hg19:Y:20009300-CTC-AAT hg38:Y:17897420-CTC-AAT | P5_Prx | *** | |||||
hg19:Y:20342601-TG-AT hg38:Y:18180715-TG-AT | P5_Dst | *** | |||||
hg19:Y:20347260-AGT-TGC hg38:Y:18185374-AGT-TGC | P5_Dst | *** | |||||
hg19:Y:20347283-GGAGT-TGAGC hg38:Y:18185397-GGAGT-TGAGC | P5_Dst | *** | |||||
hg19:Y:20420253-CAGAA-GAGAG hg38:Y:18258367-CAGAA-GAGAG | P5_Dst | *** | |||||
hg19:Y:20569614-C-CAAAAAAAAAA hg38:Y:18407728-C-CAAAAAAAAAA | P5_Dst | 33×A | *** | ||||
hg19:Y:20688300-AAGCAA-CAGGAT hg38:Y:18526414-AAGCAA-CAGGAT | P4_Prx | *** | |||||
hg19:Y:20688332-CATTTAATCAGC-TATACAAGTAGA hg38:Y:18526446-CATTTAATCAGC-TATACAAGTAGA | P4_Prx | *** | |||||
hg19:Y:20688349-AAC-A hg38:Y:18526463-AAC-A | P4_Prx | *** | |||||
hg19:Y:20688355-CAT-AATG hg38:Y:18526469-CAT-AATG | P4_Prx | *** | |||||
hg19:Y:20688369-GGCGTCACTTG-AACATCATTAA hg38:Y:18526483-GGCGTCACTTG-AACATCATTAA | P4_Prx | *** | |||||
hg19:Y:21411718-CA-C hg38:Y:19249832-CA-C | 31×A | *** | |||||
hg19:Y:22231933-GT-CC hg38:Y:20070047-GT-CC | DYZ19 | *** | |||||
hg19:Y:22231970-CCTA-GCTT hg38:Y:20070084-CCTA-GCTT | DYZ19 | *** | |||||
hg19:Y:22235008-TG-CA hg38:Y:20073122-TG-CA | DYZ19 | *** | |||||
hg19:Y:22267248-CA-TG hg38:Y:20105362-CA-TG | DYZ19 | *** | |||||
hg19:Y:22309955-TT-AG hg38:Y:20148069-TT-AG | DYZ19 | *** | |||||
hg19:Y:22330200-T-TC hg38:Y:20168314-T-TC | DYZ19 | *** | |||||
hg19:Y:22332761-AG-CT hg38:Y:20170875-AG-CT | DYZ19 | *** | |||||
hg19:Y:22332799-A-TC hg38:Y:20170913-A-TC | DYZ19 | *** | |||||
hg19:Y:22332803-AC-A hg38:Y:20170917-AC-A | DYZ19 | *** | |||||
hg19:Y:22332810-TTACGTCCAGAGTTTGTTCCTTT-GTGCGGACCCAAAGAGTGAGC hg38:Y:20170924-TTACGTCCAGAGTTTGTTCCTTT-GTGCGGACCCAAAGAGTGAGC | DYZ19 | *** | |||||
hg19:Y:22332835-ATGTGTCCAGAG-CAGCAAGAT hg38:Y:20170949-ATGTGTCCAGAG-CAGCAAGAT | DYZ19 | *** | |||||
hg19:Y:22352926-C-CAAGA hg38:Y:20191040-C-CAAGA | DYZ19 | *** | |||||
hg19:Y:22421061-CA-C hg38:Y:20259175-CA-C | DYZ19 | *** | |||||
hg19:Y:22421424-TAGGTGCC-AAGCTGCA hg38:Y:20259538-TAGGTGCC-AAGCTGCA | DYZ19 | *** | |||||
hg19:Y:22421679-CCAGT-GCAGA hg38:Y:20259793-CCAGT-GCAGA | DYZ19 | *** | |||||
hg19:Y:22450600-GG-AA hg38:Y:20288714-GG-AA | DYZ19 | *** | |||||
hg19:Y:22480975-TCAGT-ACACA hg38:Y:20319089-TCAGT-ACACA | DYZ19 | *** | |||||
hg19:Y:22495725-AGTTGTG-A hg38:Y:20333839-AGTTGTG-A | DYZ19 | *** | |||||
hg19:Y:22495925-AGTGAGTGT-GGTGTGTGA hg38:Y:20334039-AGTGAGTGT-GGTGTGTGA | DYZ19 | *** | |||||
hg19:Y:22499006-TTTCG-GTTCA hg38:Y:20337120-TTTCG-GTTCA | DYZ19 | *** | |||||
hg19:Y:24264513-CTTTTTT-C hg38:Y:22118366-CTTTTTT-C | P3_b1 | 18×T | *** | ||||
hg19:Y:24566495-G-GA hg38:Y:22420348-G-GA | P3_t2 | *** | |||||
hg19:Y:24686428-C-CTTTTTTTG hg38:Y:22540281-C-CTTTTTTTG | P3_b2 | 23×T | *** | ||||
hg19:Y:26060168-C-CAAAAAAAAA hg38:Y:23914021-C-CAAAAAAAAA | P1_Y1 | 39×A | *** | ||||
hg19:Y:26207943-CG-AC hg38:Y:24061796-CG-AC | P1_Y1 | *** | |||||
hg19:Y:26207960-ACCCATCT-A hg38:Y:24061813-ACCCATCT-A | P1_Y1 | *** | |||||
hg19:Y:27134156-AAG-A hg38:Y:24988009-AAG-A | P1_g3 | *** | |||||
hg19:Y:27407148-GAACG-AAACT hg38:Y:25261001-GAACG-AAACT | P1_g3 | *** | |||||
hg19:Y:27520670-TGGATCC-GTGTGCT hg38:Y:25374523-TGGATCC-GTGTGCT | P1_Y2 | *** | |||||
hg19:Y:27520710-ATGTTCAAGG-A hg38:Y:25374563-ATGTTCAAGG-A | P1_Y2 | *** | |||||
hg19:Y:27862547-A-AGAGC hg38:Y:25716400-A-AGAGC | P1_Y2 | *** | |||||
hg19:Y:27938167-TTTTA-CTAG hg38:Y:25792020-TTTTA-CTAG | P1_Y2 | *** | |||||
hg19:Y:28107511-CT-C hg38:Y:25961364-CT-C | P1_Y2 | *** | |||||
hg19:Y:58830823-ACATTC-CGATTT hg38:Y:56760043-GAATGT-AAATCG | *** | ||||||
hg19:Y:58843676-GTTT-ATTC hg38:Y:56747192-AAAC-GAAT | *** | ||||||
hg19:Y:58843778-ACGATTCC-TGGAGTCA hg38:Y:56747086-GGAATCGT-TGACTCCA | *** | ||||||
hg19:Y:58844971-GATG-CATT hg38:Y:56745897-CATC-AATG | *** | ||||||
hg19:Y:58870549-TTG-T hg38:Y:56720318-GAC-G | *** | ||||||
hg19:Y:58877133-GT-TC hg38:Y:56713737-AC-GA | *** | ||||||
hg19:Y:59007959-C-CAAAAAAAA hg38:Y:56861812-C-CAAAAAAAA | 26×A | *** | |||||
hg19:Y:59013640-TTTTTTTT-AAATATATATATA hg38:Y:56867493-TTTTTTTT-AAATATATATATA | *** | ||||||
hg19:Y:14919271-C-CTTT hg38:Y:12807338-C-CTTTTT | 45×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Haplotype Progression
The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.
DYS393 | DYS390 | DYS19 | DYS391 | DYS385 | DYS426 | DYS388 | DYS439 | DYS389i | DYS392 | DYS389ii | DYS458 | DYS459 | DYS455 | DYS454 | DYS447 | DYS437 | DYS448 | DYS449 | DYS464 | DYS460 | Y-GATA-H4 | YCAII | DYS456 | DYS607 | DYS576 | DYS570 | CDY | DYS442 | DYS438 | DYS531 | DYS578 | DYF395S1 | DYS590 | DYS537 | DYS641 | DYS472 | DYF406S1 | DYS511 | DYS425 | DYS413 | DYS557 | DYS594 | DYS436 | DYS490 | DYS534 | DYS450 | DYS444 | DYS481 | DYS520 | DYS446 | DYS617 | DYS568 | DYS487 | DYS572 | DYS640 | DYS492 | DYS565 | DYS710 | DYS485 | DYS632 | DYS495 | DYS540 | DYS714 | DYS716 | DYS717 | DYS505 | DYS556 | DYS549 | DYS589 | DYS522 | DYS494 | DYS533 | DYS636 | DYS575 | DYS638 | DYS462 | DYS452 | DYS445 | Y-GATA-A10 | DYS463 | DYS441 | Y-GGAAT-1B07 | DYS525 | DYS712 | DYS593 | DYS650 | DYS532 | DYS715 | DYS504 | DYS513 | DYS561 | DYS552 | DYS726 | DYS635 | DYS587 | DYS643 | DYS497 | DYS510 | DYS434 | DYS461 | DYS435 | FTY371 | FTY303 | FTY10 | FTY284 | FTY219 | FTY324 | FTY327 | FTY394 | DYS538 | FTY220 | FTY254 | FTY19 | FTY4 | DYS577 | FTY24 | FTY346 | FTY160 | FTY62 | FTY400 | FTY114 | FTY246 | FTY26 | FTY368 | FTY173 | FTY209 | FTY337 | FTY81 | FTY387 | FTY361 | FTY330 | FTY65 | FTY168 | FTY171 | FTY136 | FTY53 | FTY40 | FTY386 | FTY100 | FTY152 | FTY55 | FTY297 | FTY370 | FTY103 | FTY64 | FTY174 | FTY313 | FTY362 | FTY342 | FTY161 | FTY374 | FTY316 | FTY101 | FTY204 | DYS477 | FTY192 | DYS502 | FTY341 | DYS493 | FTY1 | FTY227 | DYS499 | FTY391 | FTY353 | FTY332 | FTY163 | DYS483 | FTY172 | FTY180 | DYS581 | FTY179 | FTY188 | FTY369 | FTY70 | FTY63 | DYS508 | FTY347 | FTY83 | FTY277 | FTY276 | FTY195 | FTY109 | FTY356 | FTY215 | FTY105 | FTY123 | FTY242 | FTY214 | FTY132 | FTY262 | FTY333 | FTY208 | DYF398B | FTY43 | FTY166 | FTY13 | FTY11 | DYS584 | DYS608 | FTY95 | FTY151 | FTY388 | FTY256 | DYS580 | FTY234 | FTY268 | FTY139 | FTY27 | FTY75 | DYS512 | FTY329 | FTY320 | FTY7 | FTY247 | FTY211 | DYS474 | FTY39 | FTY376 | FTY37 | FTY373 | DYS475 | FTY138 | FTY288 | FTY264 | FTY93 | FTY380 | FTY18 | FTY115 | DYS569 | FTY390 | FTY46 | FTY243 | FTY322 | FTY281 | FTY153 | FTY181 | FTY184 | FTY359 | FTY121 | FTY74 | FTY279 | DYS530 | FTY45 | DYS573 | DYS542 | FTY36 | FTY304 | FTY203 | FTY291 | FTY142 | FTY191 | FTY183 | FTY141 | FTY299 | FTY193 | FTY124 | FTY16 | FTY236 | FTY185 | FTY378 | FTY225 | FTY397 | FTY3 | FTY67 | FTY182 | FTY334 | DYS623 | FTY348 | FTY357 | FTY275 | FTY306 | FTY383 | FTY253 | FTY285 | DYS645 | FTY17 | FTY85 | DYS598 | FTY375 | FTY325 | FTY12 | FTY365 | FTY35 | FTY237 | FTY238 | FTY305 | FTY56 | FTY129 | FTY352 | FTY292 | FTY154 | DYS539 | FTY301 | FTY366 | FTY231 | DYS618 | FTY216 | FTY82 | FTY393 | FTY155 | FTY68 | FTY32 | FTY265 | FTY300 | FTY143 | FTY201 | FTY199 | FTY86 | FTY98 | FTY144 | DYS541 | DYS507 | FTY20 | FTY116 | FTY308 | FTY177 | FTY89 | FTY158 | FTY22 | FTY84 | FTY186 | FTY396 | FTY91 | FTY29 | FTY78 | FTY229 | FTY260 | FTY250 | FTY364 | DYS476 | FTY221 | FTY57 | FTY377 | FTY384 | DYS466 | FTY363 | FTY137 | FTY69 | FTY72 | FTY251 | FTY2 | FTY217 | FTY257 | FTY120 | FTY25 | FTY252 | FTY33 | FTY42 | FTY54 | FTY372 | DYS480 | FTY176 | FTY76 | FTY66 | FTY197 | FTY385 | FTY270 | FTY298 | FTY198 | FTY117 | DYS544 | FTY159 | FTY232 | FTY156 | FTY343 | FTY296 | FTY311 | FTY344 | FTY178 | FTY367 | FTY73 | FTY112 | FTY295 | DYS616 | FTY338 | FTY196 | FTY157 | FTY162 | DYS551 | FTY148 | FTY94 | FTY52 | FTY131 | FTY9 | FTY194 | FTY8 | FTY318 | FTY317 | FTY99 | FTY289 | FTY169 | FTY51 | FTY345 | FTY398 | FTY111 | FTY273 | FTY382 | FTY47 | FTY30 | FTY147 | DYS615 | FTY302 | FTY354 | FTY326 | FTY88 | FTY248 | FTY267 | FTY170 | FTY60 | DYS453 | FTY249 | FTY167 | DYS624 | FTY134 | FTY235 | FTY145 | FTY14 | FTY80 | FTY50 | DYS514 | FTY340 | DYS585 | DYS516 | FTY293 | FTY207 | FTY278 | FTY210 | DYS523 | FTY269 | FTY530 | FTY1156 | FTY1070 | FTY906 | FTY1004 | FTY331 | FTY31 | FTY226 | FTY335 | DYS583 | FTY339 | FTY113 | FTY280 | FTY255 | FTY59 | DYS620 | FTY349 | FTY130 | FTY119 | DYF398A | FTY58 | FTY127 | FTY321 | FTY92 | FTY392 | DYF392 | FTY290 | FTY312 | FTY135 | FTY150 | FTY294 | FTY244 | FTY48 | FTY282 | DYS489 | FTY272 | FTY239 | FTY258 | FTY49 | DYS574 | FTY41 | FTY905 | FTY1103 | FTY502 | FTY743 | FTY443 | FTY670 | FTY883 | DYS631 | FTY1042 | FTY510 | DYS389B | FTY512 | FTY837 | DYS642 | FTY407 | FTY935 | FTY563 | FTY1016 | FTY1091 | FTY1049 | FTY1155 | DYS602 | FTY587 | FTY635 | FTY904 | DYS543 | FTY1148 | FTY861 | FTY742 | FTY433 | FTY1039 | FTY71 | FTY259 | FTY108 | FTY336 | FTY44 | FTY233 | FTY274 | FTY34 | FTY942 | FTY1068 | FTY945 | FTY1051 | FTY658 | FTY625 | FTY800 | FTY818 | FTY971 | FTY509 | FTY1025 | FTY835 | FTY984 | DYS637 | FTY832 | FTY689 | FTY998 | FTY520 | FTY445 | FTY809 | FTY428 | FTY562 | FTY897 | FTY1064 | FTY1088 | FTY1052 | DYF405 | FTY310 | FTY189 | DYS488 | FTY283 | FTY28 | FTY578 | DYS484 | FTY858 | FTY596 | FTY915 | FTY446 | FTY452 | FTY1006 | FTY612 | FTY507 | FTY614 | FTY824 | FTY1055 | FTY690 | FTY2318 | FTY981 | FTY946 | FTY1040 | DYS718 | FTY15 | FTY2025 | DYS685u1 | DYS596u5 | FTY1511 | FTY769 | FTY923 | FTY1167 | FTY415 | FTY505 | FTY241 | FTY2263 | FTY517 | FTY2180 | FTY775 | DYS567 | FTY444 | FTY691 | FTY1120 | FTY223 | DYF393u3 | FTY1850 | FTY645 | FTY696 | FTY1166 | FTY991 | FTY912 | DYS551u4 | FTY447 | DYS518u3 | FTY875 | DYS536u1 | FTY585 | FTY896 | FTY731 | FTY401 | FTY2011 | FTY665 | FTY814 | FTY2050 | DYS626u3 | FTY750 | FTY471 | FTY985 | FTY589 | FTY420 | FTY921 | FTY457 | FTY657 | FTY1110 | FTY485 | FTY315 | FTY1852 | FTY1107 | FTY489 | FTY522 | FTY654 | FTY110 | FTY881 | DYS470 | FTY534 | FTY1101 | FTY1933 | FTY936 | FTY772 | FTY1047 | FTY2351 | FTY680 | FTY2254 | FTY1030 | FTY2083 | FTY287 | FTY797 | FTY2366 | FTY951 | FTY774 | FTY1116 | DYS621 | FTY885 | FTY1012 | DYF394u1 | FTY888 | FTY648 | FTY725 | FTY643 | FTY927 | FTY1022 | DYS559 | FTY933 | FTY633 | FTY900 | FTY1848 | FTY478 | FTY533 | FTY467 | FTY1900 | FTY421 | DYS612u5 | DYS595 | FTY668 | FTY1028 | DYS579 | FTY646 | FTY1026 | FTY801 | FTY432 | FTY2301 | FTY466 | FTY531 | FTY1083 | FTY997 | FTY1114 | FTY830 | FTY655 | FTY910 | FTY1143 | FTY572 | DYS506 | DYS558u2 | FTY1127 | FTY712 | FTY634 | FTY499 | FTY1094 | FTY724 | FTY535 | FTY552 | FTY430 | FTY588 | DYS609 | FTY961 | FTY813 | FTY656 | FTY839 | FTY882 | FTY789 | FTY459 | FTY1037 | FTY435 | FTY1157 | FTY1546 | FTY2242 | FTY720 | DYS614u10 | FTY887 | FTY473 | FTY816 | FTY1060 | FTY472 | FTY943 | FTY1482 | FTY565 | DYS629 | FTY891 | FTY438 | DYS582 | FTY468 | FTY649 | FTY606 | FTY792 | FTY1087 | FTY895 | DYS614u3 | FTY574 | FTY1556 | FTY560 | FTY694 | FTY1097 | DYS518u6 | FTY876 | FTY2443 | FTY990 | FTY934 | FTY465 | FTY1046 | FTY1312 | FTY751 | FTY1915 | FTY678 | FTY419 | FTY958 | FTY456 | DYS592u1 | FTY1172 | FTY416 | FTY650 | FTY808 | FTY1542 | DYS721u1 | FTY746 | FTY2233 | FTY892 | FTY845 | FTY1034 | FTY498 | DYF382u1 | FTY637 | DYS588 | FTY947 | DYS543u3 | FTY644 | DYS703 | DYS649 | FTY212 | FTY781 | FTY1106 | FTY592 | FTY848 | FTY940 | FTY903 | FTY1081 | FTY952 | DYS706u2 | FTY1084 | FTY700 | FTY482 | DYS625u7 | FTY960 | FTY586 | FTY1330 | FTY1119 | FTY1762 | FTY1010 | FTY417 | FTY716 | DYS627u3 | FTY1942 | FTY1067 | FTY841 | FTY1031 | FTY1082 | FTY1023 | FTY475 | FTY222 | FTY962 | FTY423 | FTY664 | DYS517u1 | FTY1076 | FTY1557 | FTY1154 | DYS681 | FTY1002 | DYS706u1 | FTY1174 | FTY986 | FTY651 | FTY886 | FTY1078 | DYS546u4 | FTY1092 | FTY2471 | FTY1111 | FTY461 | FTY323 | FTY1013 | FTY506 | FTY550 | FTY767 | FTY721 | DYS548 | FTY559 | DYS705 | FTY640 | FTY613 | FTY402 | FTY2426 | FTY755 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P312/S116 | 13 | 24 | 14 | 11 | 11-14 | 12 | 12 | 12 | 13 | 13 | 29 | 17 | 9-10 | 11 | 11 | 25 | 15 | 19 | 29 | 15-15-17-17 | 11 | 11 | 19-23 | 16 | 15 | 18 | 17 | 36-38 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 10 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 15 | 8 | 12 | 22 | 20 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 33 | 15 | 9 | 16 | 12 | 26 | 26 | 19 | 12 | 11 | 13 | 12 | 10 | 9 | 12 | 12 | 10 | 11 | 11 | 30 | 12 | 13 | 24 | 13 | 10 | 10 | 20 | 15 | 19 | 13 | 24 | 17 | 12 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
L21/S145 | 13 | 24 | 14 | 11 | 11-14 | 12 | 12 | 12 | 13 | 13 | 29 | 17 | 9-10 | 11 | 11 | 25 | 15 | 19 | 29 | 15-15-17-17 | 11 | 11 | 19-23 | 16 | 15 | 18 | 17 | 36-38 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 10 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 15 | 8 | 12 | 22 | 20 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 35 | 15 | 9 | 16 | 12 | 25 | 26 | 19 | 12 | 11 | 13 | 12 | 11 | 9 | 12 | 12 | 10 | 11 | 11 | 30 | 12 | 13 | 24 | 13 | 10 | 10 | 20 | 15 | 19 | 13 | 24 | 17 | 12 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MacLennan | 13 | 25 | 14 | 10 | 11-13 | 12 | 12 | 12 | 13 | 14 | 29 | 17 | 9-10 | 11 | 11 | 24 | 15 | 18 | 29 | 15-16-16-17 | 11 | 11 | 19-23 | 17 | 16 | 18 | 16 | 38-38 | 12 | 12 | 11 | 9 | 15-16 | 8 | 10 | 10 | 8 | 10 | 10 | 12 | 23-23 | 16 | 10 | 12 | 12 | 17 | 8 | 12 | 26 | 20 | 13 | 12 | 11 | 13 | 11 | 11 | 12 | 12 | 34 | 15 | 9 | 16 | 12 | 24 | 26 | 19 | 13 | 11 | 12 | 12 | 11 | 9 | 12 | 12 | 10 | 11 | 11 | 30 | 12 | 13 | 24 | 13 | 10 | 10 | 21 | 15 | 19 | 13 | 24 | 17 | 13 | 15 | 24 | 12 | 23 | 18 | 10 | 14 | 17 | 9 | 12 | 11 |
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: TLW6C* | 16000000 | 10000000 | 8300000 |
Used in age calculations | 16000000 | 10000000 | 8300000 |
Counts of SNPs | 7 | 6 |
* BED data not available. Using default values.
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