McNally

FGC: 5TF7R, FTDNA: 198682, YFull-FGC: YF02591, YSEQ: 345
MDKA Birth: Ireland

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z2959 > Z46375 > DF106 > DF104 > DF105 > ZZ87 > FGC4108/S588 > S603 > ZZ76 > FGC57785 > FGC23592 > A1742

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
5TF7R		Manual
Edits
2836600-C-T 2968559-C-T FGC23590 YY+
5196426-C-A 5328385-C-A FGC23591 +
17648284-C-T 15536404-C-T FGC23596 YY+
21600513-C-T 19438627-C-T FGC23598 Y+
21572593-G-A 19410707-G-A FGC23597 YY*
22299833-G-A 20137947-G-A BY24436 DYZ19 **
22299818-C-G 20137932-C-G BY216810 DYZ19 **
9940587-A-T 10102978-A-T FT361940 **
20326007-C-CTTTTTT 18164121-C-CTTTTTT P5_Dst 29×T**
13431439-T-C 11275763-T-C **
25709386-G-GTTTTTTT 23563239-G-GTTTTTTT P1_b3 31×T**
8454427-T-TTG 8586386-T-TTG 10×TG**
10011498-G-C 10173889-G-C **
10049720-T-G 10212111-T-G **
9950862-T-G 10113253-T-G **
4824672-T-G 4956631-T-G **
4351403-A-C 4483362-A-C FT129806 **
3080434-G-A 3212393-G-A **
22419782-T-C 20257896-T-C DYZ19 **
13368087-G-A 11212411-G-A **
6120316-A-C 6252275-A-C BY32374BY32374 **
13438854-A-T 11283178-A-T **
13438821-T-G 11283145-T-G **
4261417-A-G 4393376-A-G **
22229755-A-G 20067869-A-G FT453300 DYZ19 **
13444408-A-G 11288732-A-G **
13423125-T-C 11267449-T-C Z8981 **
13435721-C-A 11280045-C-A **
13616470-T-G 11460794-T-G FGC23169 **
9933192-G-T 10095583-G-T **
13435719-G-A 11280043-G-A **
4435822-G-A 4567781-G-A **
4695714-T-C 4827673-T-C **
5262311-T-C 5394270-T-C **
5975895-A-T 6107854-A-T FGC57783 **
7623440-A-T 7755399-A-T **
9939713-T-C 10102104-T-C A13699 **
9939878-G-A 10102269-G-A **
9939960-T-A 10102351-T-A **
9939964-G-A 10102355-G-A **
13222392-G-A 11066716-G-A **
13554491-G-C 11398815-G-C **
13582582-T-C 11426906-T-C **
13639959-T-A 11484283-T-A **
13648103-A-G 11492427-A-G **
13667339-G-A 11511663-G-A **
13667358-A-G 11511682-A-G **
13740761-G-T 11585085-G-T **
13918969-A-T 11798263-A-T **
15118450-G-A 13006537-G-A **
15252765-T-C 13140851-T-C **
15262024-T-A 13150108-T-A **
15262026-C-T 13150110-C-T **
16533124-A-G 14421244-A-G **
17262721-A-G 15150841-A-G **
18883882-C-T 16772002-C-T FT418620 **
22309436-A-T 20147550-A-T DYZ19 **
23051984-G-A 20890098-G-A **
28586000-A-G 26439853-A-G CTS12414 **
58863796-A-C 56727075-T-G FGC79250 **
13864641-GTACCAAAAGT-G 11743935-GTACCAAAAGT-G ***
13648120-T-G 11492444-T-G ***
13855640-A-G 11734934-A-G ***
22491242-G-T 20329356-G-T DYZ19 ***
22299829-C-A 20137943-C-A DYZ19 ***
9955411-C-T 10117802-C-T ***
22505037-G-T 20343151-G-T DYZ19 ***
22491341-A-T 20329455-A-T DYZ19 ***
22229799-T-A 20067913-T-A DYZ19 ***
22449934-T-G 20288048-T-G DYZ19 ***
13703147-C-A 11547471-C-A ***
13740752-T-G 11585076-T-G ***
13870201-T-G 11749495-T-G ***
22232506-C-G 20070620-C-G DYZ19 ***
13465342-T-C 11309666-T-C ***
13699355-C-G 11543679-C-G ***
22449701-C-G 20287815-C-G DYZ19 ***
28580366-G-A 26434219-G-A CTS12346 ***
13716401-C-T 11560725-C-T ***
9941333-G-A 10103724-G-A ***
22360385-T-G 20198499-T-G DYZ19 ***
22452561-G-A 20290675-G-A DYZ19 ***
22366630-A-G 20204744-A-G DYZ19 ***
22366638-ATCCTT-TTTCTG 20204752-ATCCTT-TTTCTG DYZ19 ***
58908600-GTTC-CATT 56682268-GAAC-AATG ***
23900998-C-CTAA 21739112-C-CTAA ***
10073388-C-A 10235779-C-A ***
13129615-C-T 10619101-C-T ***
13129616-T-G 10619102-T-G ***
22251641-T-A 20089755-T-A DYZ19 ***
58848606-G-A 56742265-C-T ***
58877063-G-T 56713808-C-A ***
13485854-CCG-TCA 11330178-CCG-TCA ***
16242402-CTTTTTTT-C 14130522-CTTTTTTT-C 18×T***
22251617-ACA-CCT 20089731-ACA-CCT DYZ19 ***
22251635-TA-GT 20089749-TA-GT DYZ19 ***
22480992-GTCTTC-TTCTGT 20319106-GTCTTC-TTCTGT DYZ19 ***
27636974-GATT-CATC 25490827-GATT-CATC P1_Y2 ***
13465335-T-A 11309659-T-A ***
13716437-A-G 11560761-A-G ***
19937298-A-C 17825418-A-C P5_Prx ***
22366589-C-T 20204703-C-T DYZ19 ***
58847325-A-C 56743546-T-G ***
2729648-C-CTTTT 2861607-C-CTTTT 25×T***
22262643-C-CT 20100757-C-CT DYZ19 ***
22342573-TA-T 20180687-TA-T DYZ19 ***
9940915-G-A 10103306-G-A ***
22344795-G-A 20182909-G-A DYZ19 ***
13728287-T-A 11572611-T-A ***
58909135-A-C 56681736-T-G ***
58909152-A-T 56681719-T-A ***
9940906-CTG-TTA 10103297-CTG-TTA ***
26365074-G-A 24218927-G-A P1_Y1 ***
58820404-C-T 56770467-G-A ***
58909130-T-C 56681741-A-G ***
22235093-G-GC 20073207-G-GC DYZ19 ***
13485065-A-G 11329389-A-G ***
13485060-T-G 11329384-T-G ***
13723564-G-A 11567888-G-A ***
22263702-C-G 20101816-C-G DYZ19 ***
58840562-G-A 56750309-C-T ***
9952144-TT-GA 10114535-TT-GA ***
22235306-AT-A 20073420-AT-A DYZ19 ***
9941298-TAA-CAG 10103689-TAA-CAG ***
13485114-T-G 11329438-T-G ***
10025078-G-C 10187469-G-C ***
13703159-C-T 11547483-C-T ***
10084309-A-T 10246700-A-T ***
22324910-T-A 20163024-T-A DYZ19 ***
22342089-G-T 20180203-G-T DYZ19 ***
22500116-A-T 20338230-A-T DYZ19 ***
58844871-A-C 56746000-T-G ***
58911360-G-A 56679511-C-T ***
13484778-CA-TC 11329102-CA-TC ***
13682963-GAGTA-AAGTG 11527287-GAGTA-AAGTG ***
23801733-C-CAAAA 21639847-C-CAAAA 31×A***
58877098-AG-TC 56713772-CT-GA ***
27636936-A-G 25490789-A-G P1_Y2 ***
13462155-AGCC-GGCT 11306479-AGCC-GGCT ***
13842478-TAATCA-GAATGG 11721772-TAATCA-GAATGG ***
58881985-C-T 56708886-G-A ***
13483894-G-T 11328218-G-T ***
13703173-G-A 11547497-G-A ***
13703238-C-A 11547562-C-A ***
22309972-T-A 20148086-T-A DYZ19 ***
22480903-C-G 20319017-C-G DYZ19 ***
58907158-A-T 56683713-T-A ***
58910250-A-T 56680621-T-A ***
9932701-GT-AC 10095092-GT-AC ***
9939960-TAAAG-AAAAA 10102351-TAAAG-AAAAA ***
13416387-T-A 11260711-T-A ***
22503555-G-A 20341669-G-A DYZ19 ***
22256959-TTT-CTC 20095073-TTT-CTC DYZ19 ***
58894978-C-T 56695893-G-A ***
13438923-C-G 11283247-C-G ***
22503560-A-G 20341674-A-G DYZ19 ***
58873029-G-T 56717842-C-A ***
58894964-A-C 56695907-T-G ***
10010780-AAC-CAT 10173171-AAC-CAT ***
13455784-AAG-CAT 11300108-AAG-CAT ***
13459689-TCT-CCA 11304013-TCT-CCA ***
13459696-TTTG-ATTC 11304020-TTTG-ATTC ***
58909164-AGCGGA-C 56681702-TCCGCT-G ***
58909203-AG-TC 56681667-CT-GA ***
22231556-A-C 20069670-A-C DYZ19 ***
58893246-G-A 56697625-C-T ***
58824606-ATC-TTG 56766263-GAT-CAA ***
10025112-C-T 10187503-C-T FT255254 ***
13460127-C-G 11304451-C-G ***
13203925-C-A 11048249-C-A ***
13716407-T-G 11560731-T-G ***
13725297-G-A 11569621-G-A ***
58847856-C-G 56743015-G-C ***
13203913-CGATG-TGATA 11048237-CGATG-TGATA ***
22480972-CC-AA 20319086-CC-AA DYZ19 ***
58908655-TCTTCG-CATTCC 56682211-CGAAGA-GGAATG ***
58894781-G-A 56696090-C-T ***
13416557-G-A 11260881-G-A ***
22224340-C-T 20062454-C-T DYZ19 ***
25406022-G-T 23259875-G-T P2_r2 ***
58880884-G-T 56709987-C-A ***
13140114-CCATTAAACTCG-C 10629600-CCATTAAACTCG-C ***
18048723-T-TTGA 15936843-T-TTGA 11×TGA***
24643282-CA-C 22497135-CA-C P3_t2 28×A***
22247165-A-C 20085279-A-C DYZ19 ***
9939470-T-C 10101861-T-C ***
13139973-G-C 10629459-G-C ***
9939425-T-C 10101816-T-C ***
10066843-G-A 10229234-G-A ***
13256139-CTTTC-GTTTT 11100463-CTTTC-GTTTT ***
13460188-CCCTC-GCCTA 11304512-CCCTC-GCCTA ***
22273629-C-G 20111743-C-G DYZ19 ***
22457115-C-G 20295229-C-G DYZ19 ***
58890635-A-C 56700236-T-G ***
58894609-C-G 56696262-G-C ***
58908541-T-A 56682330-A-T ***
13140110-CAATCCATTAA-C 10629596-CAATCCATTAA-C ***
22353496-A-G 20191610-A-G DYZ19 ***
6120273-A-G 6252232-A-G ***
6120279-A-C 6252238-A-C ***
13430807-G-A 11275131-G-A ***
13716377-A-G 11560701-A-G ***
58848578-G-T 56742293-C-A ***
58864068-G-A 56726803-C-T ***
13262766-CCCT-TGCC 11107090-CCCT-TGCC ***
13832600-CCTAAATTTTC-G 11711894-CCTAAATTTTC-G ***
13842412-AGAAAAG-GGAACA 11721706-AGAAAAG-GGAACA ***
13842428-TAAAGTAT-GAA 11721722-TAAAGTAT-GAA ***
13842447-TGACTCAAAAGG-GGAGAGT 11721741-TGACTCAAAAGG-GGAGAGT ***
13868476-GACTCA-G 11747770-GACTCA-G ***
58890422-GTTCG-ATTCC 56700445-CGAAC-GGAAT ***
23480475-T-G 21318589-T-G ***
10101660-A-G 10264051-A-G ***
26400702-C-T 24254555-C-T P1_Y1 ***
9451418-A-C 9613809-A-C ***
6566145-C-T 6698104-C-T ***
9951601-G-C 10113992-G-C ***
9951613-T-C 10114004-T-C ***
22245727-A-G 20083841-A-G DYZ19 ***
22352681-A-T 20190795-A-T DYZ19 ***
6648613-C-T 6780572-C-T 27×T***
6036859-T-G 6168818-T-G ***
13436405-T-A 11280729-T-A ***
14725963-A-C 12614031-A-C M4183 ***
4824666-G-A 4956625-G-A ***
22457321-A-C 20295435-A-C DYZ19 ***
21894650-T-A 19732764-T-A ***
14725957-A-C 12614025-A-C ***
19442403-C-A 17330523-C-A ***
22247198-A-G 20085312-A-G DYZ19 ***
7023178-G-T 7155137-G-T ***
13619626-A-G 11463950-A-G ***
9923817-C-A 10086208-C-A ***
22247202-T-C 20085316-T-C DYZ19 ***
22457290-G-C 20295404-G-C DYZ19 ***
13436375-A-C 11280699-A-C ***
14039132-G-T 11918426-G-T ***
4351388-T-A 4483347-T-A ***
9522033-T-C 9684424-T-C ***
9990887-T-C 10153278-T-C ***
6036864-C-T 6168823-C-T ***
10104557-N-T 10266948-N-T ***
10060558-T-A 10222949-T-A ***
20356223-A-G 18194337-A-G P5_Dst ***
22668737-A-G 20506851-A-G ***
18877865-A-G 16765985-A-G ***
17834875-G-C 15722995-G-C ***
22253089-G-C 20091203-G-C BY214118 DYZ19 ***
9939934-T-C 10102325-T-C ***
9940543-T-G 10102934-T-G ***
13442006-T-C 11286330-T-C ***
13414152-C-T 11258476-C-T ***
10048724-T-A 10211115-T-A ***
4096568-A-C 4228527-A-C ***
22247075-A-G 20085189-A-G DYZ19 ***
13427838-A-G 11272162-A-G ***
13430833-T-C 11275157-T-C ***
22247236-A-G 20085350-A-G DYZ19 ***
4370865-C-T 4502824-C-T ***
28491973-C-A 26345826-C-A ***
25921341-A-G 23775194-A-G P1_Y1 ***
2786474-T-G 2918433-T-G ***
10011303-A-G 10173694-A-G ***
22222832-A-T 20060946-A-T DYZ19 ***
58856957-G-C 56733914-C-G ***
19173949-A-G 17062069-A-G ***
28487937-T-C 26341790-T-C ***
26111863-T-G 23965716-T-G P1_Y1 ***
2896110-T-C 3028069-T-C ***
14391131-C-T 12270427-C-T FGC24664 ***
27565092-T-C 25418945-T-C P1_Y2 ***
58904475-A-T 56686396-T-A ***
6638830-C-T 6770789-C-T ***
7536332-C-T 7668291-C-T ***
19803645-T-A 17691765-T-A P5_Prx ***
22247085-C-T 20085199-C-T DYZ19 ***
22694170-A-G 20532284-A-G ***
13460114-A-G 11304438-A-G ***
10060700-G-C 10223091-G-C ***
21602129-T-A 19440243-T-A ***
10093561-T-G 10255952-T-G ***
28391908-C-T 26245761-C-T P1_gr2 ***
9938797-G-T 10101188-G-T ***
7301455-G-A 7433414-G-A ***
13484750-A-G 11329074-A-G ***
9938790-C-A 10101181-C-A ***
9973829-T-C 10136220-T-C ***
28038555-C-G 25892408-C-G P1_Y2 ***
18332759-G-T 16220879-G-T P6_Prx ***
19012912-T-C 16901032-T-C ***
22481002-T-C 20319116-T-C DYZ19 ***
17070546-C-T 14958666-C-T FT282608 ***
16139373-A-T 14027493-A-T P8_Dst ***
13852259-T-A 11731553-T-A ***
19427963-A-C 17316083-A-C Y26808 ***
27870562-C-G 25724415-C-G P1_Y2 ***
10093571-T-G 10255962-T-G ***
24339173-T-C 22193026-T-C P3_t1 ***
4171129-C-T 4303088-C-T S756FGC45276 ***
58916608-T-A 56674263-A-T ***
19487956-G-C 17376076-G-C ***
18002964-C-A 15891084-C-A P7_Gap ***
15292170-G-T 13180269-G-T ***
58833743-G-C 56757128-C-G ***
15293968-A-G 13182067-A-G ***
22197247-T-C 20035361-T-C ***
7025984-A-G 7157943-A-G ***
7023202-G-A 7155161-G-A ***
5976041-G-A 6108000-G-A ***
19860718-G-T 17748838-G-T P5_Prx ***
2901983-T-C 3033942-T-C ***
3167820-G-A 3299779-G-A ***
3178620-T-A 3310579-T-A ***
3207072-T-A 3339031-T-A ***
3209303-C-A 3341262-C-A ***
3270446-A-T 3402405-A-T ***
3316459-T-C 3448418-T-C ***
3358069-T-C 3490028-T-C ***
3457880-C-T 3589839-C-T ***
3458733-C-T 3590692-C-T ***
3521433-A-G 3653392-A-G ***
3522021-A-C 3653980-A-C ***
3573104-C-T 3705063-C-T ***
3634680-G-A 3766639-G-A ***
3661253-C-T 3793212-C-T ***
3688981-G-A 3820940-G-A ***
3794157-T-A 3926116-T-A ***
3879019-T-A 4010978-T-A ***
4152092-T-C 4284051-T-C ***
4185985-T-C 4317944-T-C ***
4194810-C-A 4326769-C-A ***
4322542-C-A 4454501-C-A ***
4404468-A-G 4536427-A-G ***
4417732-G-T 4549691-G-T ***
4447054-T-G 4579013-T-G ***
4668492-A-C 4800451-A-C ***
4668495-T-A 4800454-T-A ***
4713601-A-G 4845560-A-G ***
4819841-C-A 4951800-C-A ***
4819842-T-A 4951801-T-A ***
4859460-G-A 4991419-G-A ***
4909318-G-C 5041277-G-C ***
5203787-A-C 5335746-A-C ***
5326771-G-T 5458730-G-T ***
5424167-A-C 5556126-A-C ***
5424168-G-A 5556127-G-A ***
5424190-T-C 5556149-T-C ***
5424193-C-G 5556152-C-G ***
5424200-T-G 5556159-T-G ***
5424209-C-A 5556168-C-A ***
5424227-C-T 5556186-C-T ***
5477042-G-A 5609001-G-A ***
5478298-T-G 5610257-T-G ***
5639247-C-A 5771206-C-A ***
5639248-G-A 5771207-G-A ***
5639273-G-T 5771232-G-T ***
5847584-T-C 5979543-T-C ***
5898014-G-T 6029973-G-T ***
5986785-T-A 6118744-T-A ***
5986786-T-G 6118745-T-G ***
5986790-C-A 6118749-C-A ***
6160277-G-A 6292236-G-A IR3_Dst ***
6160333-C-A 6292292-C-A IR3_Dst ***
6164756-C-A 6296715-C-A IR3_Dst ***
6192762-G-C 6324721-G-C IR3_Dst ***
6192769-C-A 6324728-C-A IR3_Dst ***
6198553-A-G 6330512-A-G IR3_Dst ***
6198570-A-C 6330529-A-C IR3_Dst ***
6198573-T-G 6330532-T-G IR3_Dst ***
6200528-T-A 6332487-T-A IR3_Dst ***
6200869-G-A 6332828-G-A IR3_Dst ***
6200922-A-G 6332881-A-G IR3_Dst ***
6221926-A-C 6353885-A-C IR3_Dst ***
6221952-G-A 6353911-G-A IR3_Dst ***
6221958-C-G 6353917-C-G IR3_Dst ***
6248037-T-G 6379996-T-G IR3_Dst ***
6265976-A-C 6397935-A-C IR3_Dst ***
6310809-C-T 6442768-C-T IR3_Dst ***
6392903-C-G 6524862-C-G ***
6392937-C-T 6524896-C-T ***
6392945-G-C 6524904-G-C ***
6413444-C-T 6545403-C-T ***
6415237-T-A 6547196-T-A ***
6467391-C-T 6599350-C-T ***
6724772-T-C 6856731-T-C ***
6982919-C-A 7114878-C-A ***
6995052-C-T 7127011-C-T BY62794BY62794 ***
7024617-A-T 7156576-A-T Z35490 ***
7119408-A-G 7251367-A-G ***
7300728-C-T 7432687-C-T ***
7374161-T-C 7506120-T-C ***
7445245-G-A 7577204-G-A ***
7536324-C-T 7668283-C-T ***
7713171-T-G 7845130-T-G ***
7768565-A-C 7900524-A-C ***
7827863-G-T 7959822-G-T ***
8043899-G-C 8175858-G-C ***
8044573-T-A 8176532-T-A ***
8236230-C-T 8368189-C-T ***
8811788-G-A 8943747-G-A ***
9033721-A-T 9196112-A-T ***
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27909004-T-C 25762857-T-C P1_Y2 ***
27909006-T-A 25762859-T-A P1_Y2 ***
27909018-A-G 25762871-A-G P1_Y2 ***
27911151-G-T 25765004-G-T P1_Y2 ***
27911168-G-T 25765021-G-T P1_Y2 ***
27911841-G-A 25765694-G-A P1_Y2 ***
27911885-A-C 25765738-A-C P1_Y2 ***
27912274-C-T 25766127-C-T P1_Y2 ***
27912280-C-T 25766133-C-T P1_Y2 ***
27912301-T-C 25766154-T-C P1_Y2 ***
27920676-T-C 25774529-T-C P1_Y2 ***
27920692-A-G 25774545-A-G P1_Y2 ***
27921824-A-C 25775677-A-C P1_Y2 ***
27921825-A-C 25775678-A-C P1_Y2 ***
27923124-A-G 25776977-A-G P1_Y2 ***
27923130-C-T 25776983-C-T P1_Y2 ***
27925399-G-C 25779252-G-C P1_Y2 ***
27931099-T-C 25784952-T-C P1_Y2 ***
27931522-C-T 25785375-C-T P1_Y2 ***
27939924-G-C 25793777-G-C P1_Y2 ***
28022609-T-C 25876462-T-C P1_Y2 ***
28027245-C-A 25881098-C-A P1_Y2 ***
28034545-T-A 25888398-T-A P1_Y2 ***
28038471-G-T 25892324-G-T P1_Y2 ***
28038504-T-A 25892357-T-A P1_Y2 ***
28038680-A-C 25892533-A-C P1_Y2 ***
28038723-A-C 25892576-A-C P1_Y2 ***
28042360-G-C 25896213-G-C P1_Y2 ***
28042398-T-A 25896251-T-A P1_Y2 ***
28042422-T-C 25896275-T-C P1_Y2 ***
28061277-T-C 25915130-T-C P1_Y2 ***
28061279-C-A 25915132-C-A P1_Y2 ***
28077159-G-C 25931012-G-C P1_Y2 ***
28077160-G-A 25931013-G-A P1_Y2 ***
28089417-G-A 25943270-G-A P1_Y2 ***
28089418-G-A 25943271-G-A P1_Y2 ***
28089419-A-G 25943272-A-G P1_Y2 ***
28117298-A-C 25971151-A-C P1_b4 ***
28175286-T-A 26029139-T-A P1_b4 ***
28212901-A-T 26066754-A-T P1_b4 ***
28212902-G-T 26066755-G-T P1_b4 ***
28213304-G-A 26067157-G-A P1_b4 ***
28348354-T-C 26202207-T-C P1_gr2 ***
28391974-A-C 26245827-A-C P1_gr2 ***
28395138-C-A 26248991-C-A P1_gr2 ***
28395188-G-T 26249041-G-T P1_gr2 ***
28403423-T-C 26257276-T-C P1_gr2 ***
28434424-C-A 26288277-C-A P1_gr2 ***
28444019-A-G 26297872-A-G P1_gr2 ***
28456531-T-C 26310384-T-C P1_gr2 ***
28456554-G-A 26310407-G-A P1_gr2 ***
28457392-A-G 26311245-A-G ***
28457777-C-T 26311630-C-T ***
28494359-T-C 26348212-T-C ***
28535381-G-A 26389234-G-A ***
28580330-T-A 26434183-T-A ***
28584164-T-C 26438017-T-C ***
28585959-T-C 26439812-T-C ***
28586006-T-A 26439859-T-A CTS12415 ***
28586052-C-A 26439905-C-A ***
28586057-C-A 26439910-C-A CTS12416 ***
28586067-T-C 26439920-T-C Y44649 ***
28723772-G-A 26577625-G-A ***
28724769-C-A 26578622-C-A ***
58819340-N-T 56771531-N-A ***
58819341-N-T 56771530-N-A ***
58819348-N-C 56771523-N-G ***
58820368-C-A 56770503-G-T ***
58820373-T-A 56770498-A-T ***
58820387-A-C 56770484-T-G ***
58820412-T-A 56770459-A-T ***
58820415-G-T 56770456-C-A ***
58820421-T-C 56770450-A-G ***
58820432-G-C 56770439-C-G ***
58824632-T-A 56766239-A-T ***
58824633-T-G 56766238-A-C ***
58824649-C-T 56766222-G-A ***
58824665-T-A 56766206-A-T ***
58824671-A-C 56766200-T-G ***
58824674-C-T 56766197-G-A ***
58824675-A-G 56766196-T-C ***
58825309-C-G 56765562-G-C ***
58825419-T-C 56765452-A-G ***
58825422-C-T 56765449-G-A ***
58826912-C-G 56763959-G-C ***
58827135-G-A 56763736-C-T ***
58828227-C-T 56762644-G-A ***
58828943-T-C 56761928-A-G ***
58831491-C-T 56759380-G-A ***
58832592-A-C 56758279-T-G ***
58833030-T-C 56757841-A-G ***
58833034-T-G 56757837-A-C ***
58833035-T-G 56757836-A-C ***
58833037-C-T 56757834-G-A ***
58833044-T-A 56757827-A-T ***
58833177-A-C 56757694-T-G ***
58833621-G-T 56757250-C-A ***
58833644-C-A 56757227-G-T ***
58833675-A-T 56757196-T-A ***
58833803-G-C 56757068-C-G ***
58837910-G-T 56752961-C-A ***
58837925-G-T 56752946-C-A ***
58837963-G-A 56752908-C-T ***
58838339-G-C 56752532-C-G ***
58839581-G-C 56751290-C-G ***
58839600-A-C 56751271-T-G ***
58840300-A-C 56750571-T-G ***
58842270-C-A 56748601-G-T ***
58842320-C-A 56748551-G-T ***
58843625-G-C 56747246-C-G ***
58843845-G-C 56747026-C-G ***
58844826-G-C 56746045-C-G ***
58844866-T-C 56746005-A-G ***
58845986-A-T 56744885-T-A ***
58846118-G-C 56744753-C-G ***
58847081-G-A 56743790-C-T ***
58847090-A-C 56743781-T-G ***
58847141-C-A 56743730-G-T ***
58847218-C-T 56743653-G-A 4×CCATT***
58847285-A-C 56743586-T-G ***
58847290-A-C 56743581-T-G ***
58847296-G-A 56743575-C-T ***
58847298-G-T 56743573-C-A ***
58847300-T-C 56743571-A-G ***
58847305-A-C 56743566-T-G ***
58847324-T-C 56743547-A-G ***
58847794-A-C 56743077-T-G ***
58848579-A-C 56742292-T-G ***
58849343-G-C 56741528-C-G ***
58850684-A-C 56740187-T-G ***
58850699-G-C 56740172-C-G ***
58851761-T-G 56739110-A-C ***
58854299-C-A 56736572-G-T ***
58854338-G-C 56736533-C-G ***
58856706-G-C 56734165-C-G ***
58858511-A-C 56732360-T-G ***
58858514-C-T 56732357-G-A ***
58858523-C-A 56732348-G-T ***
58858554-A-T 56732317-T-A ***
58858563-T-A 56732308-A-T ***
58859147-A-C 56731724-T-G ***
58859162-G-C 56731709-C-G ***
58859164-A-T 56731707-T-A ***
58859288-A-T 56731583-T-A ***
58859294-G-A 56731577-C-T ***
58859854-A-C 56731017-T-G ***
58862194-G-C 56728677-C-G ***
58863379-C-T 56727492-G-A ***
58863428-C-T 56727443-G-A ***
58864058-T-A 56726813-A-T ***
58865648-T-C 56725223-A-G ***
58865655-G-C 56725216-C-G ***
58865656-G-T 56725215-C-A ***
58865743-T-C 56725128-A-G ***
58868157-G-C 56722714-C-G ***
58868172-G-C 56722699-C-G ***
58868685-C-T 56722186-G-A 4×CCATT***
58868818-G-A 56722053-C-T ***
58872216-A-T 56718655-T-A ***
58872236-G-C 56718635-C-G ***
58872241-G-T 56718630-C-A ***
58872887-T-A 56717984-A-T ***
58873107-T-A 56717764-A-T ***
58874379-A-C 56716492-T-G ***
58874388-T-C 56716483-A-G ***
58874399-G-C 56716472-C-G ***
58874409-T-C 56716462-A-G ***
58874416-G-T 56716455-C-A ***
58875190-G-C 56715681-C-G ***
58875224-C-A 56715647-G-T ***
58876304-T-C 56714567-A-G ***
58876440-G-C 56714431-C-G ***
58877032-T-G 56713839-A-C ***
58877047-A-C 56713824-T-G ***
58877059-A-C 56713812-T-G ***
58877148-G-T 56713723-C-A ***
58879543-T-C 56711328-A-G ***
58879546-A-T 56711325-T-A ***
58879677-G-T 56711194-C-A ***
58879684-G-C 56711187-C-G ***
58881186-G-C 56709685-C-G ***
58881207-C-A 56709664-G-T ***
58881557-G-C 56709314-C-G ***
58882862-A-C 56708009-T-G ***
58883003-G-C 56707868-C-G ***
58883251-G-T 56707620-C-A ***
58883313-G-C 56707558-C-G ***
58890640-A-C 56700231-T-G ***
58890661-A-C 56700210-T-G ***
58891630-A-C 56699241-T-G ***
58891644-T-C 56699227-A-G ***
58893204-G-C 56697667-C-G ***
58893207-G-C 56697664-C-G ***
58893216-C-A 56697655-G-T ***
58893231-G-A 56697640-C-T ***
58893235-G-C 56697636-C-G ***
58893256-C-A 56697615-G-T ***
58895844-C-A 56695027-G-T ***
58905707-G-A 56685164-C-T ***
58906355-G-A 56684516-C-T ***
58906599-G-C 56684272-C-G ***
58906755-G-A 56684116-C-T ***
58907137-G-T 56683734-C-A ***
58907138-A-T 56683733-T-A ***
58907249-T-G 56683622-A-C ***
58908546-T-A 56682325-A-T ***
58908571-C-A 56682300-G-T ***
58909093-C-T 56681778-G-A ***
58909117-T-C 56681754-A-G ***
58909225-C-A 56681646-G-T ***
58909249-T-C 56681622-A-G ***
58909785-C-T 56681086-G-A ***
58909795-G-T 56681076-C-A ***
58910000-T-A 56680871-A-T ***
58910212-T-C 56680659-A-G ***
58910260-T-G 56680611-A-C ***
58910283-G-A 56680588-C-T ***
58910390-G-T 56680481-C-A ***
58910405-C-T 56680466-G-A ***
58910408-T-C 56680463-A-G ***
58911316-C-T 56679555-G-A ***
58911321-G-T 56679550-C-A ***
58911349-G-C 56679522-C-G ***
58911351-C-T 56679520-G-A ***
58911354-T-G 56679517-A-C ***
58911443-C-G 56679428-G-C ***
58911461-T-G 56679410-A-C ***
58913084-G-A 56677787-C-T ***
58914143-T-C 56676728-A-G ***
58916602-G-C 56674269-C-G ***
58917664-N-T 56673207-N-A ***
58996041-G-C 56849894-G-C ***
22332712-AA-GT 20170826-AA-GT DYZ19 ***
9951713-CCG-TCA 10114104-CCG-TCA ***
13140118-TAAACTC-T 10629604-TAAACTC-T ***
10084437-A-AT 10246828-A-AT ***
19272161-G-AA 17160281-G-AA ***
28587530-CG-TA 26441383-CG-TA ***
28587495-CA-TG 26441348-CA-TG ***
4167676-G-AA 4299635-G-AA ***
13464525-TGT-GGC 11308849-TGT-GGC ***
17662535-GGGAT-G 15550655-GGGAT-G 7×GGAT***
17787124-AAG-A 15675244-AAG-A ***
13486004-A-AC 11330328-A-AC ***
13468651-CCCC-TGCCA 11312975-CCCC-TGCCA ***
10048715-ACT-GTA 10211106-ACT-GTA ***
13435719-GCC-ACA 11280043-GCC-ACA ***
22299808-TAA-GAG 20137922-TAA-GAG DYZ19 ***
22267293-TAC-GGT 20105407-TAC-GGT DYZ19 ***
13469216-TTGAGATTCT-ACAAGAGTCC 11313540-TTGAGATTCT-ACAAGAGTCC ***
3167820-GAA-AAG 3299779-GAA-AAG ***
3688993-AG-A 3820952-AG-A ***
3764615-GAA-G 3896574-GAA-G ***
3772158-C-CTT 3904117-C-CTT ***
3862057-G-CAT 3994016-G-CAT ***
3866257-C-CAA 3998216-C-CAA ***
3969295-G-GT 4101254-G-GT 9×T***
4134484-C-CAA 4266443-C-CAA 18×A***
4468329-G-GA 4600288-G-GA 9×A***
4555858-ATT-A 4687817-ATT-A ***
4773481-C-CTTT 4905440-C-CTTT 25×T***
4786193-A-ATG 4918152-A-ATG ***
4909353-TG-CA 5041312-TG-CA ***
5424175-CA-C 5556134-CA-C ***
5424217-TAAGCA-AAAGTG 5556176-TAAGCA-AAAGTG ***
5739769-A-AT 5871728-A-AT 10×T***
5847155-G-GA 5979114-G-GA ***
5847159-A-CATT 5979118-A-CATT ***
5922961-TCTC-T 6054920-TCTC-T ***
6164668-AGTGAACAGGCAACCTACGGAATGGGAGAAAATTTTTCTAATCTA-TTTTTTATCCCACATTCTCAATACCCTTC 6296627-AGTGAACAGGCAACCTACGGAATGGGAGAAAATTTTTCTAATCTA-TTTTTTATCCCACATTCTCAATACCCTTC IR3_Dst ***
6313322-A-AT 6445281-A-AT IR3_Dst ***
6403413-ATAAAATACCGACGTATATAGTATAGGTG-A 6535372-ATAAAATACCGACGTATATAGTATAGGTG-A ***
6598492-TATAAG-CATAGA 6730451-TATAAG-CATAGA ***
6808134-C-CAAAAA 6940093-C-CAAAAA 22×A***
7223194-CAAA-C 7355153-CAAA-C 22×A***
7853242-TTTTGTTG-T 7985201-TTTTGTTG-T ***
8251339-ATCCCAT-GTCAAATC 8383298-ATCCCAT-GTCAAATC ***
8826678-C-CAAAAAAAA 8958637-C-CAAAAAAAA 29×A***
9443417-GAAATATGAT-G 9605808-GAAATATGAT-G ***
9529459-AAGTCA-CAGACAG 9691850-AAGTCA-CAGACAG IR3_Prx ***
9562069-ACG-GGT 9724460-ACG-GGT IR3_Prx ***
9562079-GTT-ATTTC 9724470-GTT-ATTTC IR3_Prx ***
9562093-GA-TC 9724484-GA-TC IR3_Prx ***
9622635-AGTAGGTT-GATAGATA 9785026-AGTAGGTT-GATAGATA IR3_Prx ***
9680281-CA-TG 9842672-CA-TG IR3_Prx ***
9915061-CT-C 10077452-CT-C ***
9917705-GTCTCCACA-ATCTTCACC 10080096-GTCTCCACA-ATCTTCACC ***
9932158-ACAGTG-CTGGTA 10094549-ACAGTG-CTGGTA ***
9932708-CTCTGACA-TTCGGACG 10095099-CTCTGACA-TTCGGACG ***
9935332-AGCTA-GGCTG 10097723-AGCTA-GGCTG ***
9939086-TC-GG 10101477-TC-GG ***
9939979-AAT-GAC 10102370-AAT-GAC ***
9944214-ACATC-GCATT 10106605-ACATC-GCATT ***
9951060-AC-A 10113451-AC-A ***
9953463-ACTGCTTAG-TCTGGTTAT 10115854-ACTGCTTAG-TCTGGTTAT ***
9953907-TG-GC 10116298-TG-GC ***
9955088-CT-C 10117479-CT-C ***
9955102-GTG-ATA 10117493-GTG-ATA ***
9960466-TAA-AAG 10122857-TAA-AAG ***
9974235-ATA-CTC 10136626-ATA-CTC ***
9981505-GCTT-ACTC 10143896-GCTT-ACTC ***
9992569-TCACATAC-ATATATGA 10154960-TCACATAC-ATATATGA ***
10045241-GAT-CAG 10207632-GAT-CAG ***
10048601-GCTT-CCTA 10210992-GCTT-CCTA ***
10049682-AAT-CAA 10212073-AAT-CAA ***
10054247-AAAG-TAA 10216638-AAAG-TAA ***
10066965-CCAAC-TCAAT 10229356-CCAAC-TCAAT ***
10072206-CA-TG 10234597-CA-TG ***
10084431-C-CT 10246822-C-CT ***
13109881-GG-CA 10599367-GG-CA ***
13126319-GTTTCTCA-CTATGTCG 10615805-GTTTCTCA-CTATGTCG ***
13133888-G-GTT 10623374-G-GTT ***
13136108-TG-T 10625594-TG-T ***
13139919-GGGTTGGAGCTCG-AGGTTGGAGCTCA 10629405-GGGTTGGAGCTCG-AGGTTGGAGCTCA ***
13140077-TGCGTGTGATTCCATTAAATCAGA-T 10629563-TGCGTGTGATTCCATTAAATCAGA-T ***
13140088-CCATTAAATCAGAATTCCTT-C 10629574-CCATTAAATCAGAATTCCTT-C ***
13140097-CAGAATTCCTTTCCAATCCATTAAACTCG-C 10629583-CAGAATTCCTTTCCAATCCATTAAACTCG-C ***
13140109-CCAATCCATTAAACTCG-C 10629595-CCAATCCATTAAACTCG-C ***
13140115-CATTAAACTCG-C 10629601-CATTAAACTCG-C ***
13140965-ATTTC-A 10630451-ATTTC-A ***
13203922-CGGCATTG-TGGAATTA 11048246-CGGCATTG-TGGAATTA ***
13341674-CACTG-GACTT 11185998-CACTG-GACTT ***
13366768-AT-GC 11211092-AT-GC ***
13399523-TTC-G 11243847-TTC-G ***
13400159-CAA-TAC 11244483-CAA-TAC ***
13405145-TTTTTTTTTT-CTTTTTAA 11249469-TTTTTTTTTT-CTTTTTAA ***
13411356-AT-GG 11255680-AT-GG ***
13420985-TCA-CCC 11265309-TCA-CCC ***
13448590-ATTCCTTTCCACTCCTCTCCACT-A 11292914-ATTCCTTTCCACTCCTCTCCACT-A ***
13448594-CTTTCCACTCCTCTCCACTTTGCTCCACTCCACTTA-C 11292918-CTTTCCACTCCTCTCCACTTTGCTCCACTCCACTTA-C ***
13448595-TTTCCACTCCTCTCCACTTTG-T 11292919-TTTCCACTCCTCTCCACTTTG-T ***
13448599-CACTCCTCTCCACTTTGCTCCACTCCACTTA-C 11292923-CACTCCTCTCCACTTTGCTCCACTCCACTTA-C ***
13448600-ACTCCTCTCCACTT-A 11292924-ACTCCTCTCCACTT-A ***
13448602-TCCTCTCCACTTTGCTCCACTCCACTTAATTGC-T 11292926-TCCTCTCCACTTTGCTCCACTCCACTTAATTGC-T ***
13448604-CTCTCCACTTTGCTCCACTCCACTTA-C 11292928-CTCTCCACTTTGCTCCACTCCACTTA-C ***
13448605-TCTCCACTTTGCTCCACTCCACTTAATTGCA-T 11292929-TCTCCACTTTGCTCCACTCCACTTAATTGCA-T ***
13448617-TCCACTCCACTTAA-T 11292941-TCCACTCCACTTAA-T ***
13448619-CACTCCACTTA-C 11292943-CACTCCACTTA-C ***
13448637-TCCATTCCATTC-T 11292961-TCCATTCCATTC-T ***
13454812-CATTCCATTCCATTCCATTCT-C 11299136-CATTCCATTCCATTCCATTCT-C ***
13455764-CATTCCACTCAAGTTGATTCAAGTCCATTCT-C 11300088-CATTCCACTCAAGTTGATTCAAGTCCATTCT-C ***
13460203-ACATC-GCATG 11304527-ACATC-GCATG ***
13460335-CGTTCG-AGTCCA 11304659-CGTTCG-AGTCCA ***
13465253-AG-CC 11309577-AG-CC ***
13465272-CCCA-ACCT 11309596-CCCA-ACCT ***
13483157-TACA-AGC 11327481-TACA-AGC ***
13483171-GGAGA-CGAGC 11327495-GGAGA-CGAGC ***
13483708-CA-C 11328032-CA-C ***
13485134-CC-TT 11329458-CC-TT ***
13496777-TGAAG-CGAAA 11341101-TGAAG-CGAAA ***
13617121-CAA-AC 11461445-CAA-AC ***
13651049-TAG-GAC 11495373-TAG-GAC ***
13654693-AGATTT-G 11499017-AGATTT-G ***
13686118-TA-GG 11530442-TA-GG ***
13697623-AAC-GAA 11541947-AAC-GAA ***
13699837-TC-AT 11544161-TC-AT ***
13701783-CGT-GGA 11546107-CGT-GGA ***
13703145-AGC-GGA 11547469-AGC-GGA ***
13703198-TC-AT 11547522-TC-AT ***
13716392-CGG-GGA 11560716-CGG-GGA ***
13716528-G-GA 11560852-G-GA ***
13719887-CAAATA-GGAATG 11564211-CAAATA-GGAATG ***
13723544-CTCGAT-ATGGAA 11567868-CTCGAT-ATGGAA ***
13723588-CAA-AAT 11567912-CAA-AAT ***
13723617-CAAA-GAAT 11567941-CAAA-GAAT ***
13725224-CGGC-TGAA 11569548-CGGC-TGAA ***
13734753-CTCGAT-ATGGAA 11579077-CTCGAT-ATGGAA ***
13735071-GGAC-CGAA 11579395-GGAC-CGAA ***
13735079-GA-AT 11579403-GA-AT ***
13735087-TACA-GACT 11579411-TACA-GACT ***
13735104-AACG-CACC 11579428-AACG-CACC ***
13740217-CAAT-TAA 11584541-CAAT-TAA ***
13740223-TATT-AAATG 11584547-TATT-AAATG ***
13742848-ATGGAATG-TTGTACTC 11587172-ATGGAATG-TTGTACTC ***
13742909-GGT-TGG 11587233-GGT-TGG ***
13802353-TGA-CGC 11681647-TGA-CGC ***
13804902-CAATGGAAAGTTATTGAAGG-GAATGGAATGGAATC 11684196-CAATGGAAAGTTATTGAAGG-GAATGGAATGGAATC ***
13808659-TTATTCAAAA-T 11687953-TTATTCAAAA-T ***
13819930-GAATTGAATGCAATTGCATCT-G 11699224-GAATTGAATGCAATTGCATCT-G ***
13819931-AATTGAATGCAATTGCATCTAAAG-A 11699225-AATTGAATGCAATTGCATCTAAAG-A ***
13819933-TTGAATGCAATTGCATCTAAA-T 11699227-TTGAATGCAATTGCATCTAAA-T ***
13819936-AATGCAATTGCATCTAAAG-A 11699230-AATGCAATTGCATCTAAAG-A ***
13819938-TGCAATTGCATCTAAA-T 11699232-TGCAATTGCATCTAAA-T ***
13819939-GCAATTGCATCTAAAGGAATT-G 11699233-GCAATTGCATCTAAAGGAATT-G ***
13842367-AC-GG 11721661-AC-GG ***
13842843-GGATAA-G 11722137-GGATAA-G ***
13852105-AGG-TTA 11731399-AGG-TTA ***
13855503-ATGGAATGGAATG-A 11734797-ATGGAATGGAATG-A ***
13855507-AATGGAATGCAAACGG-A 11734801-AATGGAATGCAAACGG-A ***
13855523-ATGGAATG-A 11734817-ATGGAATG-A ***
13864505-GGAATTAAATGGACTCGCATGGAATAGAATTGAATGGTATGTCATT-G 11743799-GGAATTAAATGGACTCGCATGGAATAGAATTGAATGGTATGTCATT-G ***
13864528-ATAGAATTGAATGGTATGTCATTGAAT-A 11743822-ATAGAATTGAATGGTATGTCATTGAAT-A ***
13864530-AGAATTGAATGGTATGTCATT-A 11743824-AGAATTGAATGGTATGTCATT-A ***
13864531-GAATTGAATGGTATGTCATT-G 11743825-GAATTGAATGGTATGTCATT-G ***
13864532-AATTGAATGGTATGTCATTGAAT-A 11743826-AATTGAATGGTATGTCATTGAAT-A ***
13864656-GACTCA-G 11743950-GACTCA-G ***
13869370-GAATGGAACAGAAGGGAGTGTAAAGGCA-G 11748664-GAATGGAACAGAAGGGAGTGTAAAGGCA-G ***
13869813-CAAGTG-C 11749107-CAAGTG-C ***
13870111-AGTCA-G 11749405-AGTCA-G ***
13877960-TG-T 11757254-TG-T ***
14353873-GTTT-G 12233168-GTTT-G ***
14596152-AGGAG-A 12484352-AGGAG-A ***
14658026-C-CTTTTTTTTT 12546091-C-CTTTTTTTTT 16×T***
14784701-C-CTTTTTT 12672771-C-CTTTTTT 22×T***
14787001-TCTGTTTTG-T 12675071-TCTGTTTTG-T ***
15262024-TTC-ATT 13150108-TTC-ATT ***
15262467-A-AGAAAGAGAGAAAG 13150551-A-AGAAAGAGAGAAAG ***
15294119-AGGA-GGGC 13182218-AGGA-GGGC ***
15406149-ACCAAA-GTGAGAGG 13294269-ACCAAA-GTGAGAGG ***
15431490-G-GTTT 13319610-G-GTTT ***
15658211-ACG-A 13546331-ACG-A ***
15786486-C-CCCA 13674606-C-CCCA ***
16011267-ACA-TTT 13899387-ACA-TTT ***
16127690-ATG-A 14015810-ATG-A P8_Prx ***
16221233-T-TTC 14109353-T-TTC ***
16860784-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14748904-GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ***
17407178-TGCATACA-T 15295298-TGCATACA-T ***
17989305-CAG-AA 15877425-CAG-AA P7_Prx ***
18332572-GGGA-G 16220692-GGGA-G P6_Prx ***
18332610-CATCTA-C 16220730-CATCTA-C P6_Prx ***
18332630-GTG-CTT 16220750-GTG-CTT P6_Prx ***
18349928-CACCTA-ATCCTC 16238048-CACCTA-ATCCTC P6_Prx ***
18349942-GAAACG-CGAATT 16238062-GAAACG-CGAATT P6_Prx ***
18349961-TAGGCA-CAG 16238081-TAGGCA-CAG P6_Prx ***
18353799-AAGGTGT-CGGGCGC 16241919-AAGGTGT-CGGGCGC P6_Prx ***
18390107-T-TAG 16278227-T-TAG P6_Gap ***
18928568-TAC-AAA 16816688-TAC-AAA ***
18987069-AGGATTTGGGAGC-A 16875189-AGGATTTGGGAGC-A ***
19173839-GCCA-TCCC 17061959-GCCA-TCCC ***
19183814-C-CTTTTTTTTTTTTTTTT 17071934-C-CTTTTTTTTTTTTTTTT 28×T***
19227357-ATT-TTTC 17115477-ATT-TTTC ***
19227367-GTAT-CTAC 17115487-GTAT-CTAC ***
19351884-T-TATTGC 17240004-T-TATTGC ***
19475099-AAC-A 17363219-AAC-A ***
19581401-GGAT-AGA 17469521-GGAT-AGA P5_Prx ***
19646186-CTG-GT 17534306-CTG-GT P5_Prx ***
19806973-CATT-TGTTA 17695093-CATT-TGTTA P5_Prx ***
19967347-CT-C 17855467-CT-C P5_Prx ***
19992732-ATGTA-T 17880852-ATGTA-T P5_Prx ***
19992740-A-AC 17880860-A-AC P5_Prx ***
20002883-GT-CC 17891003-GT-CC P5_Prx ***
20017340-A-AT 17905460-A-AT P5_Prx ***
20123430-TA-CG 18011550-TA-CG P5_Dst ***
20123435-AAG-A 18011555-AAG-A P5_Dst ***
20123442-AA-GTCC 18011562-AA-GTCC P5_Dst ***
20123469-G-GAC 18011589-G-GAC P5_Dst ***
20123485-ATGGT-TTGGG 18011605-ATGGT-TTGGG P5_Dst ***
20123495-ATAT-GTAC 18011615-ATAT-GTAC P5_Dst ***
20356308-AT-GC 18194422-AT-GC P5_Dst ***
20376150-CAGGAAGGGGA-C 18214264-CAGGAAGGGGA-C P5_Dst ***
20611888-TCAGTTCTGCTCTGAT-AAATTTCACC 18450002-TCAGTTCTGCTCTGAT-AAATTTCACC P5_Dst ***
20611907-AGTTATT-GCTTC 18450021-AGTTATT-GCTTC P5_Dst ***
20611923-CTGCTAGG-TCACT 18450037-CTGCTAGG-TCACT P5_Dst ***
20611955-AACTAGTT-GAC 18450069-AACTAGTT-GAC P5_Dst ***
20686420-A-AT 18524534-A-AT P4_Prx ***
20842386-AA-TGAT 18680500-AA-TGAT P4_Dst ***
20942939-AAAGAAGGATTGC-A 18781053-AAAGAAGGATTGC-A P4_Dst ***
21468463-CCAAAACTA-TCAACACTT 19306577-CCAAAACTA-TCAACACTT ***
22090818-CTTTG-TTTTC 19928932-CTTTG-TTTTC ***
22103418-TAAA-T 19941532-TAAA-T ***
22131570-ACTTTAGC-A 19969684-ACTTTAGC-A ***
22167222-TAC-AAA 20005336-TAC-AAA ***
22181288-AAAT-A 20019402-AAAT-A ***
22213524-AT-TG 20051638-AT-TG ***
22222983-GAACCTG-AAAGGTGTTATGT 20061097-GAACCTG-AAAGGTGTTATGT DYZ19 ***
22222995-AGGAGGAAACACTATATACA-GTTTGGTCCT 20061109-AGGAGGAAACACTATATACA-GTTTGGTCCT DYZ19 ***
22223237-GA-TT 20061351-GA-TT DYZ19 ***
22223547-CCTG-ACTT 20061661-CCTG-ACTT DYZ19 ***
22229805-TTAT-GGAC 20067919-TTAT-GGAC DYZ19 ***
22232334-GT-AG 20070448-GT-AG DYZ19 ***
22241568-CAGTG-AAGTA 20079682-CAGTG-AAGTA DYZ19 ***
22247198-ACTGT-GCTGC 20085312-ACTGT-GCTGC DYZ19 ***
22260666-AGTT-GGTA 20098780-AGTT-GGTA DYZ19 ***
22263648-CACCTTTACT-GACCTTTACG 20101762-CACCTTTACT-GACCTTTACG DYZ19 ***
22268477-C-CAA 20106591-C-CAA DYZ19 ***
22297133-CCAGAA-ATAGTG 20135247-CCAGAA-ATAGTG DYZ19 ***
22299750-TTT-CTC 20137864-TTT-CTC DYZ19 ***
22299774-TCTA-CCTT 20137888-TCTA-CCTT DYZ19 ***
22299818-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA 20137932-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA DYZ19 ***
22309337-GTTCCTTCAGATGTGTCTAGAATTTC-G 20147451-GTTCCTTCAGATGTGTCTAGAATTTC-G DYZ19 ***
22309880-TTG-ATA 20147994-TTG-ATA DYZ19 ***
22314819-ATCA-TTCC 20152933-ATCA-TTCC DYZ19 ***
22324978-AT-GA 20163092-AT-GA DYZ19 ***
22333581-CCA-ACT 20171695-CCA-ACT DYZ19 ***
22337971-G-GA 20176085-G-GA DYZ19 ***
22356832-TAGA-CTGAC 20194946-TAGA-CTGAC DYZ19 ***
22356870-ATA-TTG 20194984-ATA-TTG DYZ19 ***
22366505-ACAA-GGAG 20204619-ACAA-GGAG DYZ19 ***
22419765-GC-AG 20257879-GC-AG DYZ19 ***
22419782-TTCACT-CTGACC 20257896-TTCACT-CTGACC DYZ19 ***
22420108-ATTCG-CTTCA 20258222-ATTCG-CTTCA DYZ19 ***
22420125-ATTTCTT-GTTACTA 20258239-ATTTCTT-GTTACTA DYZ19 ***
22420479-T-TCC 20258593-T-TCC DYZ19 ***
22420481-G-GTT 20258595-G-GTT DYZ19 ***
22421392-GAAGGTTCA-CTTGCTT 20259506-GAAGGTTCA-CTTGCTT DYZ19 ***
22421403-GTCTT-G 20259517-GTCTT-G DYZ19 ***
22421411-CACTTCAAGAATG-TATTT 20259525-CACTTCAAGAATG-TATTT DYZ19 ***
22421426-GGTGCCGA-CTCT 20259540-GGTGCCGA-CTCT DYZ19 ***
22421439-ACGCTG-TCT 20259553-ACGCTG-TCT DYZ19 ***
22421448-GTTACAGCTC-TTT 20259562-GTTACAGCTC-TTT DYZ19 ***
22421460-AAAAC-GAGA 20259574-AAAAC-GAGA DYZ19 ***
22421467-TT-GA 20259581-TT-GA DYZ19 ***
22422022-CATGTC-AAAGTA 20260136-CATGTC-AAAGTA DYZ19 ***
22452546-AGTTACTTC-GGTTTCTGT 20290660-AGTTACTTC-GGTTTCTGT DYZ19 ***
22480694-ATTAAAGT-CTTTAAGA 20318808-ATTAAAGT-CTTTAAGA DYZ19 ***
22480883-TTTCG-ATTCA 20318997-TTTCG-ATTCA DYZ19 ***
22480892-CTTC-GTTG 20319006-CTTC-GTTG DYZ19 ***
22482871-TCCTA-GTCTT 20320985-TCCTA-GTCTT DYZ19 ***
22502630-TTTCGTG-GTTCATT 20340744-TTTCGTG-GTTCATT DYZ19 ***
22504825-ATTTTAG-TGTTAT 20342939-ATTTTAG-TGTTAT DYZ19 ***
22774891-CC-TT 20613005-CC-TT ***
22973404-T-TGA 20811518-T-TGA ***
23321709-TCT-CCC 21159823-TCT-CCC ***
23368151-AGATT-A 21206265-AGATT-A ***
23786876-TTA-T 21624990-TTA-T ***
23900460-TTGTAAAC-CTGTCAAG 21738574-TTGTAAAC-CTGTCAAG ***
24273909-CA-C 22127762-CA-C P3_b1 ***
24283332-T-TAAAAA 22137185-T-TAAAAA P3_t1 27×A***
24305159-C-CA 22159012-C-CA P3_t1 ***
24305162-C-CA 22159015-C-CA P3_t1 ***
24346121-TG-T 22199974-TG-T P3_t1 ***
24346124-A-ATT 22199977-A-ATT P3_t1 ***
24637547-CTTTC-TTTAT 22491400-CTTTC-TTTAT P3_t2 ***
24665219-GGTT-AGTTA 22519072-GGTT-AGTTA P3_b2 ***
24665307-AG-CA 22519160-AG-CA P3_b2 ***
25207821-TC-AA 23061674-TC-AA P2_r1 ***
25240976-AGG-A 23094829-AGG-A P2_r1 ***
25240993-G-GAGA 23094846-G-GAGA P2_r1 ***
25593395-TT-GC 23447248-TT-GC P1_gr1 ***
25825410-GGC-CGA 23679263-GGC-CGA P1_b3 ***
25831978-TA-T 23685831-TA-T P1_b3 ***
25905328-GC-TCA 23759181-GC-TCA P1_Y1 ***
25957915-TGGG-T 23811768-TGGG-T P1_Y1 ***
25984745-TG-AGAC 23838598-TG-AGAC P1_Y1 ***
26156662-TGGG-T 24010515-TGGG-T P1_Y1 ***
26215124-ACC-TCA 24068977-ACC-TCA P1_Y1 ***
26254825-CTT-ATA 24108678-CTT-ATA P1_Y1 ***
26262710-CTGTA-GTGTG 24116563-CTGTA-GTGTG P1_Y1 ***
26362331-GTTTC-G 24216184-GTTTC-G P1_Y1 ***
26399190-TATTTATAT-GATTCATAG 24253043-TATTTATAT-GATTCATAG P1_Y1 ***
26439493-TTTACTTAT-CTTCCTTTG 24293346-TTTACTTAT-CTTCCTTTG P1_Y1 ***
26501894-GGGT-TGAG 24355747-GGGT-TGAG P1_Y1 ***
27134046-AG-A 24987899-AG-A P1_g3 ***
27261194-TTGG-T 25115047-TTGG-T P1_g3 ***
27306785-TTCA-T 25160638-TTCA-T P1_g3 ***
27326156-TG-CA 25180009-TG-CA P1_g3 ***
27356163-CTGTTG-AGAAC 25210016-CTGTTG-AGAAC P1_g3 ***
27375868-TC-GA 25229721-TC-GA P1_g3 ***
27404475-GCAC-G 25258328-GCAC-G P1_g3 ***
27427095-A-AT 25280948-A-AT P1_g3 9×T***
27562228-A-ATTAAATTT 25416081-A-ATTAAATTT P1_Y2 ***
27750782-CAACT-TGAGA 25604635-CAACT-TGAGA P1_Y2 ***
27750922-GC-AG 25604775-GC-AG P1_Y2 ***
27916621-GCT-TCC 25770474-GCT-TCC P1_Y2 ***
27921824-AATTA-CCT 25775677-AATTA-CCT P1_Y2 ***
27923127-ATTC-GTTT 25776980-ATTC-GTTT P1_Y2 ***
28038515-CTTTT-C 25892368-CTTTT-C P1_Y2 ***
28038533-AA-GC 25892386-AA-GC P1_Y2 ***
28076526-TCTTT-CCTTC 25930379-TCTTT-CCTTC P1_Y2 ***
28077151-T-GTTA 25931004-T-GTTA P1_Y2 ***
28089417-GGA-AAG 25943270-GGA-AAG P1_Y2 ***
28212901-AG-TT 26066754-AG-TT P1_b4 ***
28403389-AT-A 26257242-AT-A P1_gr2 ***
28403394-TGTTATTTGTC-AGCAAA 26257247-TGTTATTTGTC-AGCAAA P1_gr2 ***
28403410-TGAAATAGCTT-AGATA 26257263-TGAAATAGCTT-AGATA P1_gr2 ***
28403427-AATCAC-A 26257280-AATCAC-A P1_gr2 ***
28403436-CT-TG 26257289-CT-TG P1_gr2 ***
28441411-GT-TAC 26295264-GT-TAC P1_gr2 ***
28587017-ATTTA-GTTTG 26440870-ATTTA-GTTTG ***
28587355-ATTT-GTTC 26441208-ATTT-GTTC ***
28588477-GTT-ATC 26442330-GTT-ATC ***
28689030-TGTGTTTTGGAAC-T 26542883-TGTGTTTTGGAAC-T ***
28784317-AATACG-A 26638170-AATACG-A ***
28802753-TGCATA-GGAAAG 26656606-TGCATA-GGAAAG ***
28802779-CG-GA 26656632-CG-GA ***
28802795-AC-A 26656648-AC-A ***
58819337-N-NTT ***
58819351-N-NTT ***
58819359-NNNGAA-N ***
58819360-NNGAA-N ***
58820356-TCAG-CCAT 56770512-CTGA-ATGG ***
58823350-T-TC 56767519-T-TG ***
58825286-ATTCGAGTCCTTTCCAT-TTTTGATTCCCTGCCAG 56765569-ATGGAAAGGACTCGAAT-CTGGCAGGGAATCAAAA ***
58825314-CCATTCTATT-GCATACTACA 56765548-AATAGAATGG-TGTAGTATGC ***
58829771-TGCCAAA-T 56761093-ATTTGGC-A ***
58830741-ATG-TTC 56760128-CAT-GAA ***
58830797-GT-TC 56760073-AC-GA ***
58832592-AAT-CCA 56758277-ATT-TGG ***
58834311-AG-TC 56756559-CT-GA ***
58838076-TG-AT 56752794-CA-AT ***
58840276-GAGTA-CAGTG 56750591-TACTC-CACTG ***
58841265-CGAC-TGAG 56749603-GTCG-CTCA ***
58842288-ACAG-CCAT 56748580-CTGT-ATGG ***
58842299-CAATAG-C 56748565-ATCTAT-A ***
58842325-ATTCGAA-GTT 56748540-TTCGAAT-AAC ***
58842344-TAG-CAT 56748525-CTA-ATG ***
58844901-GAGGA-CAGTC 56745966-TCCTC-GACTG ***
58847251-GTTT-ATTC 56743617-AAAC-GAAT ***
58847259-AG-CC 56743611-CT-GG ***
58847432-GTA-TTC 56743437-TAC-GAA ***
58848462-CTCGAA-TTCCAT 56742404-TTCGAG-ATGGAA ***
58848479-AGCGGA-C 56742387-TCCGCT-G ***
58848553-GT-TC 56742317-AC-GA ***
58858622-GT-CA 56732248-AC-TG ***
58859176-AGCGGA-C 56731690-TCCGCT-G ***
58859215-AG-TC 56731655-CT-GA ***
58861657-TTTTGAA-ATTCGAT 56729208-TTCAAAA-ATCGAAT ***
58861686-ACTTCCAGAACATTCCA-CTTTCGACACCCAGCCT 56729169-TGGAATGTTCTGGAAGT-AGGCTGGGTGTCGAAAG ***
58865670-CTA-TTC 56725199-TAG-GAA ***
58869485-ACATTCGTGTTC-CCATACATTTTT 56721375-GAACACGAATGT-AAAAATGTATGG ***
58870585-TTAATTCGAG-CT 56720277-CTCGAATTAA-AG ***
58872219-TCG-ACC 56718650-CGA-GGT ***
58872407-TTTTGAA-ATTCGAT 56718458-TTCAAAA-ATCGAAT ***
58873052-GTTGCATTA-ACTCCTTTC 56717811-TAATGCAAC-GAAAGGAGT ***
58873067-TGTT-AGTG 56717801-AACA-CACT ***
58875040-CAGATG-C 56715824-ATCATC-A ***
58882800-CTCT-TTCC 56708068-AGAG-GGAA ***
58890623-GGCCTG-TTCCTT 56700243-CAGGCC-AAGGAA ***
58890660-GA-CC 56700210-TC-GG ***
58891649-TCAG-CCAT 56699219-CTGA-ATGG ***
58905580-AGCGGA-C 56685286-TCCGCT-G ***
58905619-AG-TC 56685251-CT-GA ***
58905654-GT-TC 56685216-AC-GA ***
58907164-GCTCTCTG-CCTTTGGA 56683700-CAGAGAGC-TCCAAAGG ***
58907234-ACATTTGA-CCAT 56683630-TCAAATGT-ATGG ***
58908514-GA-CC 56682356-TC-GG ***
58908550-GC-CA 56682320-GC-TG ***
58909962-GC-CA 56680908-GC-TG ***
58910004-TTTCT-ATTCA 56680863-AGAAA-TGAAT ***
58910233-CATTCTA-AACACT 56680632-TAGAATG-AGTGTT ***
58911275-ATTCTATTCCTGTCCA-TTTCCATTGCAGTCTT 56679581-TGGACAGGAATAGAAT-AAGACTGCAATGGAAA ***
58911450-CTTCAG-TTTCCC 56679416-CTGAAG-GGGAAA ***
58916604-GA-TT 56674266-TC-AA ***
58917652-AATTCN-A ***
58976457-T-TTCCAC 56830310-T-TTCCAC ***
58982676-CTTCA-C 56836529-CTTCA-C ***
58996094-TCTGCT-ACTACA 56849947-TCTGCT-ACTACA ***
59013617-TATA-AATG 56867470-TATA-AATG ***
59021925-CTAG-GTAGTT 56875778-CTAG-GTAGTT ***
59025458-TTGAGAC-GAGACAG 56879311-TTGAGAC-GAGACAG ***
59034045-TTTTCN-T 56887898-TTTTCA-T ***
59034047-TTC-T 56887900-TTC-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual20771820-T-A18609934-T-A134 total reads - 51A, 5C, 5G, 73T.
Manual22244899-G-C20083013-G-C118 reads - 6A, 80C, 30G, 2T. The reads with the Gs don't look like the belong at this position.
Manual22277798-G-C20115912-G-C210 reads - 10A, 98C, 89G, 13T.
Manual22335172-T-G20173286-T-G309 reads - 10A, 7C, 127G, 165T.
Manual22345801-T-C20183915-T-C135 reads - 9A, 51C, 5G, 1N, 69T.