Hartwell
BigY2: B45039MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B45039 |
---|---|---|---|---|---|---|---|
hg19:Y:28817512-T-G hg38:Y:26671365-T-G | A* | ||||||
hg19:Y:13451301-C-A hg38:Y:11295625-C-A | A* | ||||||
hg19:Y:18359856-T-C hg38:Y:16247976-T-C | P6_Prx | A* | |||||
hg19:Y:20707136-T-G hg38:Y:18545250-T-G | P4_Prx | A* | |||||
hg19:Y:24306099-G-A hg38:Y:22159952-G-A | P3_t1 | A* | |||||
hg19:Y:25896198-G-C hg38:Y:23750051-G-C | P1_Y1 | A* | |||||
hg19:Y:26087816-G-A hg38:Y:23941669-G-A | P1_Y1 | A* | |||||
hg19:Y:6523650-CGTGT-C hg38:Y:6655609-CGTGT-C | 14×GT | + | |||||
hg19:Y:2767736-T-C hg38:Y:2899695-T-C | BY56348 | Y | Y | + | |||
hg19:Y:8381048-G-T hg38:Y:8513007-G-T | BY72157 | Y | Y | + | |||
hg19:Y:13672693-A-G hg38:Y:11517017-A-G | BY87886 | DYZ17 | + | ||||
hg19:Y:14065097-G-A hg38:Y:11944391-G-A | BY92746 | Y | Y | + | |||
hg19:Y:14473987-G-A hg38:Y:12353256-G-A | Y | Y | + | ||||
hg19:Y:16095040-A-G hg38:Y:13983160-A-G | BY105704 | Y | + | ||||
hg19:Y:16434829-G-T hg38:Y:14322949-G-T | BY107745 | Y | Y | + | |||
hg19:Y:16794953-A-G hg38:Y:14683073-A-G | BY110189 | Y | Y | + | |||
hg19:Y:18126979-G-A hg38:Y:16015099-G-A | BY156760 | Y | Y | + | |||
hg19:Y:19066438-C-G hg38:Y:16954558-C-G | BY125945 | Y | Y | + | |||
hg19:Y:19372322-A-G hg38:Y:17260442-A-G | BY211819 | Y | Y | + | |||
hg19:Y:19545292-G-T hg38:Y:17433412-G-T | BY129920 | Y | Y | + | |||
hg19:Y:21172126-G-C hg38:Y:19010240-G-C | BY130856 | Y | Y | + | |||
hg19:Y:21309002-G-C hg38:Y:19147116-G-C | BY131959 | Y | Y | + | |||
hg19:Y:21479010-G-A hg38:Y:19317124-G-A | BY133208 | Y | Y | + | |||
hg19:Y:21517570-A-G hg38:Y:19355684-A-G | BY133540 | Y | Y | + | |||
hg19:Y:21773349-A-G hg38:Y:19611463-A-G | BY135341 | Y | Y | + | |||
hg19:Y:22271601-C-T hg38:Y:20109715-C-T | BY215222 | DYZ19 | + | ||||
hg19:Y:22294027-T-G hg38:Y:20132141-T-G | BY216462 | DYZ19 | + | ||||
hg19:Y:22437091-G-A hg38:Y:20275205-G-A | BY52504 | DYZ19 | + | ||||
hg19:Y:22507131-G-T hg38:Y:20345245-G-T | BY50113 | DYZ19 | + | ||||
hg19:Y:23556035-G-T hg38:Y:21394149-G-T | BY146233 | Y | Y | + | |||
hg19:Y:24396985-A-G hg38:Y:22250838-A-G | BY149588 | Y | + | ||||
hg19:Y:24480043-CG-C hg38:Y:22333896-CG-C | + | ||||||
hg19:Y:17304689-CAGATAGAT-C hg38:Y:15192809-CAGATAGAT-C | 11×AGAT | * | |||||
hg19:Y:22339472-C-A hg38:Y:20177586-C-A | DYZ19 | * | |||||
hg19:Y:13859376-AATGAC-A hg38:Y:11738670-AATGAC-A | DYZ17 | ** | |||||
hg19:Y:22234681-T-C hg38:Y:20072795-T-C | DYZ19 | ** | |||||
hg19:Y:4981867-TAG-T hg38:Y:5113826-TAG-T | ** | ||||||
hg19:Y:58842780-T-C hg38:Y:56748091-A-G | ** | ||||||
hg19:Y:58989333-T-G hg38:Y:56843186-T-G | ** | ||||||
hg19:Y:58989353-T-A hg38:Y:56843206-T-A | ** | ||||||
hg19:Y:58989359-C-A hg38:Y:56843212-C-A | ** | ||||||
hg19:Y:58989375-G-T hg38:Y:56843228-G-T | ** | ||||||
hg19:Y:22236319-C-T hg38:Y:20074433-C-T | DYZ19 | ** | |||||
hg19:Y:28234398-T-TTATATA hg38:Y:26088251-T-TTATATA | P1_b4 | 18×TA | ** | ||||
hg19:Y:28802691-T-A hg38:Y:26656544-T-A | ** | ||||||
hg19:Y:15863155-TAAAA-T hg38:Y:13751275-TAAAA-T | 17×A | ** | |||||
hg19:Y:58883656-T-A hg38:Y:56707215-A-T | ** | ||||||
hg19:Y:16430198-C-A hg38:Y:14318318-C-A | ** | ||||||
hg19:Y:22489655-T-A hg38:Y:20327769-T-A | DYZ19 | ** | |||||
hg38:Y:10883574-A-C | ** | ||||||
hg38:Y:10784324-CCCATT-C | ** | ||||||
hg38:Y:10928577-A-T | ** | ||||||
hg19:Y:27499310-CAAA-C hg38:Y:25353163-CAAA-C | P1_Y2 | 30×A | ** | ||||
hg38:Y:10922321-C-T | ** | ||||||
hg19:Y:22056350-C-A hg38:Y:19894464-C-A | ** | ||||||
hg38:Y:10847504-C-T | ** | ||||||
hg38:Y:10935474-A-C | ** | ||||||
hg38:Y:10941111-C-T | ** | ||||||
hg38:Y:10941118-C-A | ** | ||||||
hg38:Y:10941126-C-T | ** | ||||||
hg38:Y:10941139-TCG-T | ** | ||||||
hg38:Y:10941143-C-CATT | ** | ||||||
hg38:Y:10672491-T-C | ** | ||||||
hg38:Y:10672501-T-C | ** | ||||||
hg38:Y:10672511-A-G | ** | ||||||
hg38:Y:10672511-A-ATTCAT | ** | ||||||
hg38:Y:10672516-C-T | ** | ||||||
hg38:Y:10958848-A-C | ** | ||||||
hg38:Y:10792699-A-T | ** | ||||||
hg19:Y:4469906-C-A hg38:Y:4601865-C-A | ** | ||||||
hg38:Y:10826270-A-C | ** | ||||||
hg38:Y:10937712-C-G | ** | ||||||
hg38:Y:10937737-A-T | ** | ||||||
hg38:Y:10937754-C-A | ** | ||||||
hg38:Y:56748123-G-A | ** | ||||||
hg38:Y:56748128-G-A | ** | ||||||
hg38:Y:10954265-T-C | ** | ||||||
hg19:Y:8085438-CAAAA-C hg38:Y:8217397-CAAAA-C | 15×A | ** | |||||
hg19:Y:20557705-G-T hg38:Y:18395819-G-T | P5_Dst | ** | |||||
hg38:Y:56843161-C-T | ** | ||||||
hg38:Y:10999976-A-C | ** | ||||||
hg38:Y:10858531-C-T | ** | ||||||
hg19:Y:14269981-C-A hg38:Y:12149275-C-A | ** | ||||||
hg38:Y:10785837-A-G | ** | ||||||
hg19:Y:17222627-C-A hg38:Y:15110747-C-A | ** | ||||||
hg38:Y:10937689-CTATTA-C | ** | ||||||
hg38:Y:10937729-C-G | ** | ||||||
hg38:Y:10937742-C-A | ** | ||||||
hg38:Y:10937786-A-C | ** | ||||||
hg38:Y:10937792-T-C | ** | ||||||
hg19:Y:13700649-G-T hg38:Y:11544973-G-T | DYZ17 | ** | |||||
hg38:Y:10798231-C-T | ** | ||||||
hg19:Y:23802037-C-A hg38:Y:21640151-C-A | ** | ||||||
hg38:Y:10963199-C-A | ** | ||||||
hg38:Y:10798263-A-C | ** | ||||||
hg19:Y:24631265-TG-T hg38:Y:22485118-TG-T | P3_t2 | ** | |||||
hg19:Y:4174945-G-T hg38:Y:4306904-G-T | ** | ||||||
hg38:Y:10884994-T-C | ** | ||||||
hg38:Y:10972651-C-T | ** | ||||||
hg38:Y:10761025-T-C | ** | ||||||
hg38:Y:10997087-A-C | ** | ||||||
hg19:Y:13963904-C-A hg38:Y:11843198-C-A | ** | ||||||
hg19:Y:28091456-AC-A hg38:Y:25945309-AC-A | P1_Y2 | ** | |||||
hg38:Y:11005459-A-G | ** | ||||||
hg19:Y:3051327-C-A hg38:Y:3183286-C-A | ** | ||||||
hg38:Y:10999968-G-C | ** | ||||||
hg19:Y:8295526-C-A hg38:Y:8427485-C-A | ** | ||||||
hg38:Y:10843036-A-G | ** | ||||||
hg38:Y:10999880-A-T | ** | ||||||
hg19:Y:16692757-G-T hg38:Y:14580877-G-T | 27×A | ** | |||||
hg19:Y:21015104-A-AGGAC hg38:Y:18853218-A-AGGAC | P4_Dst | ** | |||||
hg38:Y:10847531-A-G | ** | ||||||
hg38:Y:10847532-A-T | ** | ||||||
hg38:Y:10847534-C-T | FT202818 | ** | |||||
hg19:Y:19547585-A-G hg38:Y:17435705-A-G | ** | ||||||
hg38:Y:10935467-C-T | ** | ||||||
hg38:Y:10935476-C-T | ** | ||||||
hg38:Y:10997100-C-T | ** | ||||||
hg19:Y:13700630-A-T hg38:Y:11544954-A-T | DYZ17 | ** | |||||
hg19:Y:16701901-G-T hg38:Y:14590021-G-T | ** | ||||||
hg38:Y:10925027-G-T | ** | ||||||
hg19:Y:28818498-G-T hg38:Y:26672351-G-T | ** | ||||||
hg38:Y:10984632-C-A | ** | ||||||
hg19:Y:13859391-A-G hg38:Y:11738685-A-G | DYZ17 | ** | |||||
hg38:Y:10941082-T-A | ** | ||||||
hg38:Y:10983963-T-C | ** | ||||||
hg19:Y:3398339-G-T hg38:Y:3530298-G-T | ** | ||||||
hg19:Y:15093552-C-T hg38:Y:12981640-C-T | ** | ||||||
hg19:Y:7332825-C-A hg38:Y:7464784-C-A | FT195520 | ** | |||||
hg19:Y:15157567-C-A hg38:Y:13045654-C-A | ** | ||||||
hg19:Y:15581089-A-T hg38:Y:13469209-A-T | ** | ||||||
hg19:Y:16319412-C-A hg38:Y:14207532-C-A | ** | ||||||
hg19:Y:16336919-TTG-T hg38:Y:14225039-TTG-T | ** | ||||||
hg38:Y:10784802-G-T | ** | ||||||
hg19:Y:6505773-C-A hg38:Y:6637732-C-A | ** | ||||||
hg19:Y:5869594-C-A hg38:Y:6001553-C-A | ** | ||||||
hg19:Y:28653117-A-C hg38:Y:26506970-A-C | ** | ||||||
hg38:Y:10935456-C-T | ** | ||||||
hg19:Y:14079788-C-A hg38:Y:11959082-C-A | ** | ||||||
hg19:Y:13855853-C-A hg38:Y:11735147-C-A | DYZ17 | ** | |||||
hg38:Y:10748042-A-G | ** | ||||||
hg38:Y:10748046-C-CATTTGATTTG | ** | ||||||
hg38:Y:10748057-A-T | ** | ||||||
hg19:Y:22295040-T-C hg38:Y:20133154-T-C | DYZ19 | ** | |||||
hg38:Y:10832427-C-A | ** | ||||||
hg19:Y:2708461-A-C hg38:Y:2840420-A-C | ** | ||||||
hg38:Y:10750065-C-A | ** | ||||||
hg38:Y:10841003-C-A | ** | ||||||
hg19:Y:28545696-CAAAAA-C hg38:Y:26399549-CAAAAA-C | 26×A | ** | |||||
hg38:Y:10937761-GTTTTTTTCCA-G | ** | ||||||
hg38:Y:10940551-C-A | ** | ||||||
hg38:Y:10826271-T-C | ** | ||||||
hg38:Y:10925013-C-T | ** | ||||||
hg38:Y:10940823-T-C | ** | ||||||
hg19:Y:15882073-TCAAAA-T hg38:Y:13770193-TCAAAA-T | ** | ||||||
hg19:Y:15671137-CTT-C hg38:Y:13559257-CTT-C | 11×T | ** | |||||
hg38:Y:10988863-T-C | ** | ||||||
hg38:Y:10877114-G-T | ** | ||||||
hg38:Y:10828860-T-C | ** | ||||||
hg19:Y:10050068-C-A hg38:Y:10212459-C-A | ** | ||||||
hg19:Y:5358867-C-A hg38:Y:5490826-C-A | ** | ||||||
hg38:Y:10820952-C-A | ** | ||||||
hg19:Y:19377069-C-A hg38:Y:17265189-C-A | ** | ||||||
hg38:Y:10828899-T-A | ** | ||||||
hg19:Y:18756329-C-A hg38:Y:16644449-C-A | ** | ||||||
hg38:Y:10924981-T-C | ** | ||||||
hg38:Y:10900174-T-A | ** | ||||||
hg19:Y:14607799-G-T hg38:Y:12496001-G-T | ** | ||||||
hg19:Y:27540964-ACAG-A hg38:Y:25394817-ACAG-A | P1_Y2 | ** | |||||
hg38:Y:10658167-C-T | ** | ||||||
hg38:Y:11037180-T-G | ** | ||||||
hg38:Y:10826280-C-G | ** | ||||||
hg38:Y:10859621-G-T | FT383957 | ** | |||||
hg38:Y:10989755-C-A | ** | ||||||
hg38:Y:10935505-TCCAC-T | ** | ||||||
hg38:Y:10958853-T-G | ** | ||||||
hg38:Y:10828924-T-A | ** | ||||||
hg38:Y:10798186-T-C | ** | ||||||
hg38:Y:10919137-G-T | ** | ||||||
hg19:Y:28818149-T-G hg38:Y:26672002-T-G | ** | ||||||
hg38:Y:10958814-TCCAC-T | ** | ||||||
hg38:Y:10884099-C-A | ** | ||||||
hg38:Y:10867947-A-T | ** | ||||||
hg19:Y:5107404-G-T hg38:Y:5239363-G-T | ** | ||||||
hg38:Y:10828912-C-G | ** | ||||||
hg38:Y:10883564-C-T | ** | ||||||
hg38:Y:10761005-T-A | ** | ||||||
hg19:Y:4416867-C-CAAA hg38:Y:4548826-C-CAAA | 17×A | ** | |||||
hg19:Y:15746155-C-A hg38:Y:13634275-C-A | ** | ||||||
hg19:Y:14461248-C-A hg38:Y:12340521-C-A | ** | ||||||
hg19:Y:28804412-T-A hg38:Y:26658265-T-A | ** | ||||||
hg19:Y:18297542-G-T hg38:Y:16185662-G-T | P6_Prx | ** | |||||
hg38:Y:10828880-T-C | FT433050 | ** | |||||
hg38:Y:10820966-A-T | ** | ||||||
hg19:Y:25931556-AAAGGAAGGAAGG-A hg38:Y:23785409-AAAGGAAGGAAGG-A | P1_Y1 | 9×AAGG | ** | ||||
hg19:Y:5576763-C-A hg38:Y:5708722-C-A | ** | ||||||
hg19:Y:16703887-G-T hg38:Y:14592007-G-T | ** | ||||||
hg38:Y:10820921-C-A | ** | ||||||
hg38:Y:56841271-A-C | ** | ||||||
hg19:Y:8668434-C-A hg38:Y:8800393-C-A | ** | ||||||
hg38:Y:10907725-C-A | ** | ||||||
hg19:Y:6833283-C-A hg38:Y:6965242-C-A | ** | ||||||
hg38:Y:10760963-C-G | ** | ||||||
hg38:Y:10761009-A-T | ** | ||||||
hg19:Y:18518340-G-T hg38:Y:16406460-G-T | P6_Dst | ** | |||||
hg38:Y:10907738-C-T | ** | ||||||
hg38:Y:10907749-G-A | ** | ||||||
hg38:Y:10907768-T-C | ** | ||||||
hg19:Y:18130605-T-G hg38:Y:16018725-T-G | ** | ||||||
hg19:Y:15066118-C-A hg38:Y:12954210-C-A | ** | ||||||
hg38:Y:56748122-T-C | ** | ||||||
hg38:Y:10760975-CTCCAGTCCAG-C | ** | ||||||
hg38:Y:10975551-C-A | ** | ||||||
hg19:Y:18189255-C-T hg38:Y:16077375-C-T | ** | ||||||
hg38:Y:10915484-A-T | ** | ||||||
hg38:Y:10915512-G-C | ** | ||||||
hg38:Y:10915522-A-G | ** | ||||||
hg38:Y:9108823-C-A | ** | ||||||
hg19:Y:22295048-T-G hg38:Y:20133162-T-G | DYZ19 | ** | |||||
hg19:Y:27862636-G-C hg38:Y:25716489-G-C | P1_Y2 | ** | |||||
hg19:Y:14000348-G-C hg38:Y:11879642-G-C | ** | ||||||
hg19:Y:14284075-T-G hg38:Y:12163369-T-G | ** | ||||||
hg38:Y:10867940-C-T | ** | ||||||
hg38:Y:11008775-TTCCAC-T | ** | ||||||
hg38:Y:10820780-A-G | ** | ||||||
hg38:Y:10997081-A-G | ** | ||||||
hg38:Y:10997095-C-G | ** | ||||||
hg38:Y:10885493-T-G | ** | ||||||
hg38:Y:11015707-C-T | ** | ||||||
hg38:Y:10938681-C-A | ** | ||||||
hg38:Y:10867137-C-A | ** | ||||||
hg38:Y:10820786-C-T | ** | ||||||
hg19:Y:14716527-C-A hg38:Y:12604595-C-A | ** | ||||||
hg38:Y:10995766-C-T | ** | ||||||
hg19:Y:28774537-C-A hg38:Y:26628390-C-A | ** | ||||||
hg19:Y:5669924-C-A hg38:Y:5801883-C-A | ** | ||||||
hg38:Y:10958134-C-T | ** | ||||||
hg38:Y:56848348-T-A | ** | ||||||
hg38:Y:10958832-A-ACGCAT | ** | ||||||
hg38:Y:10891977-A-T | ** | ||||||
hg38:Y:10781413-A-C | ** | ||||||
hg38:Y:10781416-G-T | ** | ||||||
hg38:Y:10781423-T-G | ** | ||||||
hg38:Y:10924968-T-C | ** | ||||||
hg38:Y:10924978-C-A | ** | ||||||
hg38:Y:10751184-C-T | ** | ||||||
hg38:Y:11024438-T-C | ** | ||||||
hg38:Y:56742681-G-T | ** | ||||||
hg38:Y:10828887-C-G | ** | ||||||
hg38:Y:10828902-C-T | ** | ||||||
hg38:Y:10828914-G-A | ** | ||||||
hg38:Y:10828920-A-C | ** | ||||||
hg19:Y:20776256-T-G hg38:Y:18614370-T-G | P4_Prx | ** | |||||
hg38:Y:10760993-T-A | ** | ||||||
hg38:Y2:30965-A-G | ** | ||||||
hg38:Y:10750020-C-T | ** | ||||||
hg38:Y:10630628-C-G | ** | ||||||
hg38:Y:10677982-G-T | ** | ||||||
hg19:Y:5443870-C-A hg38:Y:5575829-C-A | ** | ||||||
hg38:Y:10918473-G-T | ** | ||||||
hg19:Y:15536272-C-T hg38:Y:13424392-C-T | ** | ||||||
hg38:Y:10997132-T-C | ** | ||||||
hg19:Y:16266143-C-A hg38:Y:14154263-C-A | ** | ||||||
hg19:Y:14108880-G-A hg38:Y:11988174-G-A | ** | ||||||
hg19:Y:5500193-C-A hg38:Y:5632152-C-A | ** | ||||||
hg38:Y:10890336-C-A | ** | ||||||
hg19:Y:16429716-G-T hg38:Y:14317836-G-T | ** | ||||||
hg19:Y:22236318-G-T hg38:Y:20074432-G-T | DYZ19 | ** | |||||
hg19:Y:7138345-C-A hg38:Y:7270304-C-A | ** | ||||||
hg19:Y:18982591-AAAAG-A hg38:Y:16870711-AAAAG-A | ** | ||||||
hg38:Y:10967814-A-T | ** | ||||||
hg38:Y:10770791-C-A | ** | ||||||
hg19:Y:2744886-C-A hg38:Y:2876845-C-A | ** | ||||||
hg19:Y:2758600-G-T hg38:Y:2890559-G-T | ** | ||||||
hg19:Y:2978705-C-A hg38:Y:3110664-C-A | ** | ||||||
hg19:Y:2979880-C-A hg38:Y:3111839-C-A | ** | ||||||
hg19:Y:3178916-G-T hg38:Y:3310875-G-T | ** | ||||||
hg19:Y:3241775-G-T hg38:Y:3373734-G-T | ** | ||||||
hg19:Y:3368073-C-A hg38:Y:3500032-C-A | ** | ||||||
hg19:Y:3396455-C-T hg38:Y:3528414-C-T | FT62406 | ** | |||||
hg19:Y:3396490-C-A hg38:Y:3528449-C-A | ** | ||||||
hg19:Y:3433762-C-A hg38:Y:3565721-C-A | ** | ||||||
hg19:Y:3506271-G-T hg38:Y:3638230-G-T | ** | ||||||
hg19:Y:3569316-G-T hg38:Y:3701275-G-T | ** | ||||||
hg19:Y:3598680-A-T hg38:Y:3730639-A-T | ** | ||||||
hg19:Y:3600802-G-T hg38:Y:3732761-G-T | FT38523 | ** | |||||
hg19:Y:3952574-C-A hg38:Y:4084533-C-A | ** | ||||||
hg19:Y:4046170-C-A hg38:Y:4178129-C-A | FT16004 | ** | |||||
hg19:Y:4068427-C-A hg38:Y:4200386-C-A | ** | ||||||
hg19:Y:4138030-G-T hg38:Y:4269989-G-T | ** | ||||||
hg19:Y:4171777-T-A hg38:Y:4303736-T-A | ** | ||||||
hg19:Y:4229293-A-C hg38:Y:4361252-A-C | ** | ||||||
hg19:Y:4302190-A-T hg38:Y:4434149-A-T | ** | ||||||
hg19:Y:4383544-T-G hg38:Y:4515503-T-G | ** | ||||||
hg19:Y:4447288-G-T hg38:Y:4579247-G-T | FTB50173 | ** | |||||
hg19:Y:4457714-C-A hg38:Y:4589673-C-A | ** | ||||||
hg19:Y:4532008-C-A hg38:Y:4663967-C-A | ** | ||||||
hg19:Y:4671731-C-A hg38:Y:4803690-C-A | ** | ||||||
hg19:Y:4684215-G-T hg38:Y:4816174-G-T | ** | ||||||
hg19:Y:4730058-C-A hg38:Y:4862017-C-A | ** | ||||||
hg19:Y:4973092-G-T hg38:Y:5105051-G-T | ** | ||||||
hg19:Y:5049790-G-T hg38:Y:5181749-G-T | ** | ||||||
hg19:Y:5112651-A-C hg38:Y:5244610-A-C | ** | ||||||
hg19:Y:5180212-A-G hg38:Y:5312171-A-G | ** | ||||||
hg19:Y:5235849-C-A hg38:Y:5367808-C-A | ** | ||||||
hg19:Y:5305931-C-A hg38:Y:5437890-C-A | ** | ||||||
hg19:Y:5363794-C-A hg38:Y:5495753-C-A | ** | ||||||
hg19:Y:5406803-G-T hg38:Y:5538762-G-T | ** | ||||||
hg19:Y:5710636-C-A hg38:Y:5842595-C-A | ** | ||||||
hg19:Y:5767554-C-A hg38:Y:5899513-C-A | ** | ||||||
hg19:Y:5799742-A-G hg38:Y:5931701-A-G | ** | ||||||
hg19:Y:5823402-G-T hg38:Y:5955361-G-T | ** | ||||||
hg19:Y:5948436-C-A hg38:Y:6080395-C-A | ** | ||||||
hg19:Y:6262371-C-A hg38:Y:6394330-C-A | IR3_Dst | ** | |||||
hg19:Y:6262414-C-A hg38:Y:6394373-C-A | IR3_Dst | ** | |||||
hg19:Y:6458435-C-G hg38:Y:6590394-C-G | ** | ||||||
hg19:Y:6651374-A-C hg38:Y:6783333-A-C | ** | ||||||
hg19:Y:7152869-T-C hg38:Y:7284828-T-C | ** | ||||||
hg19:Y:7154715-T-G hg38:Y:7286674-T-G | ** | ||||||
hg19:Y:7164204-G-A hg38:Y:7296163-G-A | ** | ||||||
hg19:Y:7164212-A-C hg38:Y:7296171-A-C | ** | ||||||
hg19:Y:7166067-C-A hg38:Y:7298026-C-A | ** | ||||||
hg19:Y:7337909-T-G hg38:Y:7469868-T-G | ** | ||||||
hg19:Y:7621387-C-A hg38:Y:7753346-C-A | ** | ||||||
hg19:Y:7896785-CAATACCAAAGTTATTG-C hg38:Y:8028744-CAATACCAAAGTTATTG-C | ** | ||||||
hg19:Y:8067173-T-G hg38:Y:8199132-T-G | ** | ||||||
hg19:Y:8343066-A-C hg38:Y:8475025-A-C | ** | ||||||
hg19:Y:8692757-C-A hg38:Y:8824716-C-A | ** | ||||||
hg19:Y:8850710-A-T hg38:Y:8982669-A-T | ** | ||||||
hg19:Y:8850715-T-G hg38:Y:8982674-T-G | ** | ||||||
hg38:Y:9055220-C-A | ** | ||||||
hg38:Y:9057394-T-G | ** | ||||||
hg38:Y:9108866-C-A | ** | ||||||
hg19:Y:9767834-C-A hg38:Y:9930225-C-A | FT221816 | ** | |||||
hg19:Y:9824863-C-A hg38:Y:9987254-C-A | ** | ||||||
hg19:Y:9965305-A-C hg38:Y:10127696-A-C | FT87543 | ** | |||||
hg38:Y:10630602-TC-T | ** | ||||||
hg38:Y:10652790-T-G | ** | ||||||
hg38:Y:10659154-C-A | ** | ||||||
hg38:Y:10662458-C-A | ** | ||||||
hg38:Y:10672514-T-A | ** | ||||||
hg38:Y:10687879-C-T | ** | ||||||
hg38:Y:10690862-C-A | ** | ||||||
hg38:Y:10747793-CCATT-C | ** | ||||||
hg38:Y:10750040-C-T | ** | ||||||
hg38:Y:10752359-C-A | ** | ||||||
hg38:Y:10753746-T-C | ** | ||||||
hg38:Y:10757523-T-A | ** | ||||||
hg38:Y:10757528-T-G | ** | ||||||
hg38:Y:10759078-C-A | ** | ||||||
hg38:Y:10768659-A-G | ** | ||||||
hg38:Y:10779576-T-C | ** | ||||||
hg38:Y:10779606-T-G | ** | ||||||
hg38:Y:10781386-T-A | ** | ||||||
hg38:Y:10781400-T-A | ** | ||||||
hg38:Y:10781401-A-T | ** | ||||||
hg38:Y:10781405-A-C | ** | ||||||
hg38:Y:10781410-A-T | ** | ||||||
hg38:Y:10792175-A-C | ** | ||||||
hg38:Y:10792184-T-G | ** | ||||||
hg38:Y:10798224-T-C | ** | ||||||
hg38:Y:10798241-C-T | ** | ||||||
hg38:Y:10798250-C-G | ** | ||||||
hg38:Y:10798273-T-C | ** | ||||||
hg38:Y:10801365-T-A | ** | ||||||
hg38:Y:10803323-G-T | ** | ||||||
hg38:Y:10807681-A-T | FT87542 | ** | |||||
hg38:Y:10815104-C-CATTGT | ** | ||||||
hg38:Y:10815142-T-TGCA | ** | ||||||
hg38:Y:10815145-A-AAT | ** | ||||||
hg38:Y:10820922-C-G | ** | ||||||
hg38:Y:10820924-A-AT | ** | ||||||
hg38:Y:10820959-C-G | ** | ||||||
hg38:Y:10826235-CCAT-C | ** | ||||||
hg38:Y:10828894-T-A | ** | ||||||
hg38:Y:10834220-C-A | ** | ||||||
hg38:Y:10836197-C-A | ** | ||||||
hg38:Y:10844018-C-A | ** | ||||||
hg38:Y:10845355-C-A | ** | ||||||
hg38:Y:10845999-T-A | ** | ||||||
hg38:Y:10848897-C-A | ** | ||||||
hg38:Y:10849855-C-T | ** | ||||||
hg38:Y:10858852-T-C | ** | ||||||
hg38:Y:10864906-C-A | ** | ||||||
hg38:Y:10866994-C-A | ** | ||||||
hg38:Y:10869138-C-A | ** | ||||||
hg38:Y:10886527-A-T | ** | ||||||
hg38:Y:10886798-C-T | ** | ||||||
hg38:Y:10891997-A-T | ** | ||||||
hg38:Y:10900215-C-A | ** | ||||||
hg38:Y:10900430-C-T | ** | ||||||
hg38:Y:10915507-T-A | ** | ||||||
hg38:Y:10920023-T-G | ** | ||||||
hg38:Y:10926058-C-A | ** | ||||||
hg38:Y:10926994-A-T | FT183129 | ** | |||||
hg38:Y:10926999-A-T | ** | ||||||
hg38:Y:10931000-C-A | ** | ||||||
hg38:Y:10934999-G-T | ** | ||||||
hg38:Y:10935500-TC-T | ** | ||||||
hg38:Y:10938488-C-A | ** | ||||||
hg38:Y:10951315-C-A | ** | ||||||
hg38:Y:10961408-CTCCAT-C | ** | ||||||
hg38:Y:10974586-C-A | ** | ||||||
hg38:Y:10976868-G-T | ** | ||||||
hg38:Y:10976874-T-A | ** | ||||||
hg38:Y:10978507-C-G | ** | ||||||
hg38:Y:10979566-C-CCCATT | ** | ||||||
hg38:Y:10999856-TTC-T | ** | ||||||
hg38:Y:10999859-G-GAC | ** | ||||||
hg38:Y:11012391-A-T | ** | ||||||
hg38:Y:11013437-C-A | ** | ||||||
hg38:Y:11014565-C-G | ** | ||||||
hg38:Y:11031823-A-T | ** | ||||||
hg19:Y:13282840-C-A hg38:Y:11127164-C-A | ** | ||||||
hg19:Y:13461600-G-A hg38:Y:11305924-G-A | ** | ||||||
hg19:Y:13461620-C-G hg38:Y:11305944-C-G | ** | ||||||
hg19:Y:13532919-T-A hg38:Y:11377243-T-A | ** | ||||||
hg19:Y:13559124-A-C hg38:Y:11403448-A-C | ** | ||||||
hg19:Y:13592225-G-T hg38:Y:11436549-G-T | ** | ||||||
hg19:Y:13592374-C-A hg38:Y:11436698-C-A | ** | ||||||
hg19:Y:13716697-G-A hg38:Y:11561021-G-A | DYZ17 | ** | |||||
hg38:Y:11655095-G-T | DYZ17 | ** | |||||
hg38:Y:11658377-T-A | DYZ17 | ** | |||||
hg38:Y:11662541-G-A | BY66028 | FT87545 | DYZ17 | ** | |||
hg38:Y:11665514-C-T | FT87541 | DYZ17 | ** | ||||
hg19:Y:13894343-C-T hg38:Y:11773637-C-T | ** | ||||||
hg19:Y:13905784-G-T hg38:Y:11785078-G-T | ** | ||||||
hg19:Y:13911602-C-A hg38:Y:11790896-C-A | ** | ||||||
hg19:Y:13961841-C-A hg38:Y:11841135-C-A | ** | ||||||
hg19:Y:14135908-G-T hg38:Y:12015202-G-T | ** | ||||||
hg19:Y:14187220-T-G hg38:Y:12066514-T-G | ** | ||||||
hg19:Y:14269503-G-T hg38:Y:12148797-G-T | ** | ||||||
hg19:Y:14302325-G-T hg38:Y:12181619-G-T | ** | ||||||
hg19:Y:14377934-T-G hg38:Y:12257230-T-G | ** | ||||||
hg19:Y:14377937-A-T hg38:Y:12257233-A-T | ** | ||||||
hg19:Y:14412968-T-G hg38:Y:12292265-T-G | ** | ||||||
hg19:Y:14549919-G-T hg38:Y:12438120-G-T | ** | ||||||
hg19:Y:14554868-T-A hg38:Y:12443069-T-A | ** | ||||||
hg19:Y:14566109-A-C hg38:Y:12454309-A-C | ** | ||||||
hg19:Y:14992786-A-C hg38:Y:12880871-A-C | ** | ||||||
hg19:Y:15073319-G-A hg38:Y:12961409-G-A | ** | ||||||
hg19:Y:15093999-A-C hg38:Y:12982087-A-C | ** | ||||||
hg19:Y:15138154-G-T hg38:Y:13026241-G-T | ** | ||||||
hg19:Y:15280623-C-A hg38:Y:13168722-C-A | ** | ||||||
hg19:Y:15432984-G-T hg38:Y:13321104-G-T | ** | ||||||
hg19:Y:15536273-A-G hg38:Y:13424393-A-G | ** | ||||||
hg19:Y:15761152-T-C hg38:Y:13649272-T-C | ** | ||||||
hg19:Y:15788697-G-T hg38:Y:13676817-G-T | ** | ||||||
hg19:Y:15789888-C-A hg38:Y:13678008-C-A | ** | ||||||
hg19:Y:16171993-G-A hg38:Y:14060113-G-A | ** | ||||||
hg19:Y:16379999-T-A hg38:Y:14268119-T-A | ** | ||||||
hg19:Y:16380009-A-C hg38:Y:14268129-A-C | ** | ||||||
hg19:Y:16465985-C-A hg38:Y:14354105-C-A | ** | ||||||
hg19:Y:17095723-G-T hg38:Y:14983843-G-T | ** | ||||||
hg19:Y:17378357-G-T hg38:Y:15266477-G-T | ** | ||||||
hg19:Y:17545982-A-T hg38:Y:15434102-A-T | ** | ||||||
hg19:Y:17782553-T-G hg38:Y:15670673-T-G | ** | ||||||
hg19:Y:17886337-C-A hg38:Y:15774457-C-A | ** | ||||||
hg19:Y:17994888-A-AC hg38:Y:15883008-A-AC | P7_Prx | ** | |||||
hg19:Y:18188382-A-C hg38:Y:16076502-A-C | ** | ||||||
hg19:Y:18518325-C-A hg38:Y:16406445-C-A | P6_Dst | ** | |||||
hg19:Y:18791931-A-T hg38:Y:16680051-A-T | ** | ||||||
hg19:Y:18796284-G-T hg38:Y:16684404-G-T | ** | ||||||
hg19:Y:18925479-C-A hg38:Y:16813599-C-A | ** | ||||||
hg19:Y:19065332-G-T hg38:Y:16953452-G-T | ** | ||||||
hg19:Y:19547453-CAAAAA-C hg38:Y:17435573-CAAAAA-C | 24×A | ** | |||||
hg19:Y:19547565-C-T hg38:Y:17435685-C-T | ** | ||||||
hg19:Y:19547581-C-T hg38:Y:17435701-C-T | ** | ||||||
hg19:Y:19609398-G-C hg38:Y:17497518-G-C | P5_Prx | ** | |||||
hg19:Y:19622113-C-A hg38:Y:17510233-C-A | P5_Prx | ** | |||||
hg19:Y:20212929-A-T hg38:Y:18051043-A-T | P5_Dst | ** | |||||
hg19:Y:20212942-A-T hg38:Y:18051056-A-T | P5_Dst | ** | |||||
hg19:Y:20347842-GT-G hg38:Y:18185956-GT-G | P5_Dst | ** | |||||
hg19:Y:20579142-A-ATC hg38:Y:18417256-A-ATC | P5_Dst | ** | |||||
hg19:Y:20637674-C-A hg38:Y:18475788-C-A | P4_Prx | ** | |||||
hg19:Y:20727492-A-C hg38:Y:18565606-A-C | P4_Prx | ** | |||||
hg19:Y:20958011-T-C hg38:Y:18796125-T-C | P4_Dst | ** | |||||
hg19:Y:21242391-C-A hg38:Y:19080505-C-A | ** | ||||||
hg19:Y:21323584-G-T hg38:Y:19161698-G-T | ** | ||||||
hg19:Y:21368518-C-A hg38:Y:19206632-C-A | ** | ||||||
hg19:Y:21691937-TGGTGCCCCATGGGAGGTAGTTGGATCATGG-T hg38:Y:19530051-TGGTGCCCCATGGGAGGTAGTTGGATCATGG-T | ** | ||||||
hg19:Y:21834145-T-A hg38:Y:19672259-T-A | ** | ||||||
hg19:Y:21887833-A-G hg38:Y:19725947-A-G | ** | ||||||
hg19:Y:21963792-T-G hg38:Y:19801906-T-G | ** | ||||||
hg19:Y:21964815-G-T hg38:Y:19802929-G-T | ** | ||||||
hg19:Y:21964967-A-C hg38:Y:19803081-A-C | ** | ||||||
hg19:Y:22236316-C-G hg38:Y:20074430-C-G | DYZ19 | ** | |||||
hg19:Y:22236338-C-A hg38:Y:20074452-C-A | DYZ19 | ** | |||||
hg19:Y:22236342-G-C hg38:Y:20074456-G-C | DYZ19 | ** | |||||
hg19:Y:22236364-T-G hg38:Y:20074478-T-G | DYZ19 | ** | |||||
hg19:Y:22634953-T-A hg38:Y:20473067-T-A | ** | ||||||
hg19:Y:22655088-TATA-T hg38:Y:20493202-TATA-T | ** | ||||||
hg19:Y:23188454-C-A hg38:Y:21026568-C-A | ** | ||||||
hg19:Y:23277281-T-A hg38:Y:21115395-T-A | ** | ||||||
hg19:Y:24513485-C-A hg38:Y:22367338-C-A | ** | ||||||
hg19:Y:25732887-G-T hg38:Y:23586740-G-T | P1_b3 | ** | |||||
hg19:Y:25874866-C-A hg38:Y:23728719-C-A | P1_Y1 | ** | |||||
hg19:Y:26055110-C-A hg38:Y:23908963-C-A | P1_Y1 | ** | |||||
hg19:Y:26170568-A-G hg38:Y:24024421-A-G | P1_Y1 | ** | |||||
hg19:Y:28437732-G-T hg38:Y:26291585-G-T | P1_gr2 | ** | |||||
hg19:Y:28477087-C-A hg38:Y:26330940-C-A | ** | ||||||
hg19:Y:28515407-A-T hg38:Y:26369260-A-T | ** | ||||||
hg19:Y:28521834-G-A hg38:Y:26375687-G-A | ** | ||||||
hg19:Y:28532819-A-G hg38:Y:26386672-A-G | ** | ||||||
hg19:Y:28549473-A-C hg38:Y:26403326-A-C | ** | ||||||
hg19:Y:28592701-C-A hg38:Y:26446554-C-A | ** | ||||||
hg19:Y:28618421-C-A hg38:Y:26472274-C-A | ** | ||||||
hg19:Y:28633563-T-G hg38:Y:26487416-T-G | ** | ||||||
hg19:Y:28642799-C-A hg38:Y:26496652-C-A | ** | ||||||
hg19:Y:28721278-G-T hg38:Y:26575131-G-T | ** | ||||||
hg19:Y:28812308-T-A hg38:Y:26666161-T-A | ** | ||||||
hg38:Y:56747521-G-C | ** | ||||||
hg38:Y:56747524-C-A | ** | ||||||
hg38:Y:56747525-T-A | ** | ||||||
hg38:Y:56747540-T-A | ** | ||||||
hg38:Y:56846059-T-C | ** | ||||||
hg38:Y:56848347-C-G | ** | ||||||
hg38:Y2:22243-T-G | ** | ||||||
hg38:Y2:22277-C-A | ** | ||||||
hg19:Y:22487880-C-A hg38:Y:20325994-C-A | DYZ19 | *** | |||||
hg19:Y:14071354-CTTTTT-C hg38:Y:11950648-CTTTTT-C | 25×T | *** | |||||
hg38:Y:10669486-T-C | *** | ||||||
hg19:Y:2819960-CTTTT-C hg38:Y:2951919-CTTTT-C | 17×T | *** | |||||
hg38:Y:10934834-A-T | *** | ||||||
hg38:Y:10934804-A-G | *** | ||||||
hg38:Y:11015131-T-A | *** | ||||||
hg38:Y:10932995-T-C | *** | ||||||
hg19:Y:7106982-GCTCT-G,GCT hg38:Y:7238941-GCTCT-G,GCT | 15×CT | *** | |||||
hg38:Y:10999889-C-T | *** | ||||||
hg38:Y:10797941-ACTCTT-A,ACTC | *** | ||||||
hg38:Y:10686224-C-A | *** | ||||||
hg38:Y:10974168-C-A | *** | ||||||
hg38:Y:10840004-T-C | *** | ||||||
hg38:Y:10946664-C-A | *** | ||||||
hg19:Y:15581092-G-T hg38:Y:13469212-G-T | *** | ||||||
hg19:Y:22236186-C-T hg38:Y:20074300-C-T | DYZ19 | *** | |||||
hg19:Y:22849491-CT-C,CTT hg38:Y:20687605-CT-C,CTT | 20×T | *** | |||||
hg19:Y:13454527-C-A hg38:Y:11298851-C-A | *** | ||||||
hg19:Y:7269581-A-T hg38:Y:7401540-A-T | *** | ||||||
hg38:Y:10986793-C-A | *** | ||||||
hg19:Y:6128821-C-A hg38:Y:6260780-C-A | *** | ||||||
hg38:Y:10781228-A-C,G | *** | ||||||
hg38:Y:56838663-T-A | *** | ||||||
hg19:Y:13926825-C-A hg38:Y:11806119-C-A | *** | ||||||
hg38:Y:10787562-C-A | *** | ||||||
hg19:Y:3334588-G-A hg38:Y:3466547-G-A | *** | ||||||
hg38:Y:9057155-C-A | *** | ||||||
hg19:Y:9847289-ATTTTTTT-A,ATTTT hg38:Y:10009680-ATTTTTTT-A,ATTTT | 28×T | *** | |||||
hg38:Y:10667008-C-A,T | *** | ||||||
hg38:Y:10839903-ACTCCT-A,ATTCCA | *** | ||||||
hg38:Y:10860757-T-G | *** | ||||||
hg38:Y:10860774-A-C | *** | ||||||
hg38:Y:10911287-A-C | *** | ||||||
hg38:Y:10911292-A-C | *** | ||||||
hg38:Y:10940991-C-A | *** | ||||||
hg19:Y:13489211-A-C hg38:Y:11333535-A-C | *** | ||||||
hg38:Y:11671505-G-T | DYZ17 | *** | |||||
hg19:Y:15323661-CAA-C,CA hg38:Y:13211779-CAA-C,CA | 18×A | *** | |||||
hg19:Y:24666292-T-C hg38:Y:22520145-T-C | P3_b2 | *** | |||||
hg38:Y:56838659-G-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: B45039 | 10166072 | 8225282 | 8066081 |
Used in age calculations | 10166072 | 8225282 | 8066081 |
Counts of SNPs | 17 | 17 |
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