Lindsay
BigY2: 400595MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 400595 |
|---|---|---|---|---|---|---|---|
| hg19:Y:28810104-G-T hg38:Y:26663957-G-T | BY152007 | A* | |||||
| hg19:Y:13698652-G-A hg38:Y:11542976-G-A | DYZ17 | A* | |||||
| hg19:Y:6215155-C-T hg38:Y:6347114-C-T | IR3_Dst | A* | |||||
| hg19:Y:16130326-G-A hg38:Y:14018446-G-A | P8_Prx | A* | |||||
| hg19:Y:19721807-G-A hg38:Y:17609927-G-A | P5_Prx | A* | |||||
| hg19:Y:20051679-T-C hg38:Y:17939799-T-C | P5_Prx | A* | |||||
| hg19:Y:25900620-T-C hg38:Y:23754473-T-C | P1_Y1 | A* | |||||
| hg19:Y:22008009-G-A hg38:Y:19846123-G-A | BY155178 | Y | Y | + | |||
| hg19:Y:8397653-G-A hg38:Y:8529612-G-A | BY72320 | Y | Y | + | |||
| hg19:Y:22207077-C-A hg38:Y:20045191-C-A | BY155220 | Y | Y | + | |||
| hg19:Y:7409093-G-A hg38:Y:7541052-G-A | BY152601 | Y | Y | + | |||
| hg19:Y:8327551-G-T hg38:Y:8459510-G-T | BY152880 | Y | Y | + | |||
| hg19:Y:8437327-A-T hg38:Y:8569286-A-T | BY152915 | Y | Y | + | |||
| hg19:Y:8820731-C-T hg38:Y:8952690-C-T | BY153048 | Y | Y | + | |||
| hg19:Y:13706892-G-A hg38:Y:11551216-G-A | BY153413 | DYZ17 | + | ||||
| hg19:Y:14001964-G-C hg38:Y:11881258-G-C | FT179743 | Y | Y | + | |||
| hg19:Y:14042134-A-T hg38:Y:11921428-A-T | BY153512 | Y | Y | + | |||
| hg19:Y:15033664-A-G hg38:Y:12921752-A-G | BY153786 | Y | Y | + | |||
| hg19:Y:15719066-G-C hg38:Y:13607186-G-C | BY153955 | Y | Y | + | |||
| hg19:Y:17892292-C-T hg38:Y:15780412-C-T | Y | Y | + | ||||
| hg19:Y:18549116-C-T hg38:Y:16437236-C-T | BY156778 | Y | + | ||||
| hg19:Y:19103743-T-C hg38:Y:16991863-T-C | BY154802 | Y | Y | + | |||
| hg19:Y:19255686-T-A hg38:Y:17143806-T-A | BY154846 | Y | Y | + | |||
| hg19:Y:21265867-T-C hg38:Y:19103981-T-C | BY154985 | Y | Y | + | |||
| hg19:Y:22437123-C-A hg38:Y:20275237-C-A | FT456129 | DYZ19 | + | ||||
| hg19:Y:22443853-C-G hg38:Y:20281967-C-G | BY219291 | DYZ19 | + | ||||
| hg19:Y:22466741-T-C hg38:Y:20304855-T-C | BY221769 | DYZ19 | + | ||||
| hg19:Y:22507346-C-A hg38:Y:20345460-C-A | DYZ19 | + | |||||
| hg19:Y:22626183-T-C hg38:Y:20464297-T-C | Y | Y | + | ||||
| hg19:Y:23256854-C-G hg38:Y:21094968-C-G | BY155561 | Y | Y | + | |||
| hg19:Y:23405640-T-C hg38:Y:21243754-T-C | BY155600 | Y | Y | + | |||
| hg19:Y:23871278-G-A hg38:Y:21709392-G-A | BY155717 | Y | + | ||||
| hg19:Y:22340178-G-T hg38:Y:20178292-G-T | DYZ19 | * | |||||
| hg19:Y:13456768-G-A hg38:Y:11301092-G-A | BY30836 | ** | |||||
| hg19:Y:17128534-TC-T hg38:Y:15016654-TC-T | ** | ||||||
| hg19:Y:15815269-G-A hg38:Y:13703389-G-A | ** | ||||||
| hg19:Y:22366201-A-T hg38:Y:20204315-A-T | DYZ19 | ** | |||||
| hg19:Y:22430045-C-A hg38:Y:20268159-C-A | DYZ19 | ** | |||||
| hg38:Y:56840087-C-A | ** | ||||||
| hg19:Y:19189509-G-A hg38:Y:17077629-G-A | ** | ||||||
| hg38:Y:11021060-C-A | ** | ||||||
| hg19:Y:5829141-C-A hg38:Y:5961100-C-A | ** | ||||||
| hg19:Y:23006773-C-A hg38:Y:20844887-C-A | ** | ||||||
| hg19:Y:16309310-T-C hg38:Y:14197430-T-C | ** | ||||||
| hg19:Y:14802799-C-A hg38:Y:12690870-C-A | ** | ||||||
| hg19:Y:15411163-C-A hg38:Y:13299283-C-A | ** | ||||||
| hg19:Y:16601445-C-CA hg38:Y:14489565-C-CA | ** | ||||||
| hg19:Y:16601493-T-C hg38:Y:14489613-T-C | ** | ||||||
| hg38:Y:10921939-C-T | ** | ||||||
| hg38:Y:10921940-G-T | ** | ||||||
| hg38:Y:10921949-T-A | ** | ||||||
| hg38:Y:10783182-G-T | ** | ||||||
| hg19:Y:16007264-C-A hg38:Y:13895384-C-A | ** | ||||||
| hg19:Y:21488712-C-A hg38:Y:19326826-C-A | ** | ||||||
| hg38:Y:11026273-C-A | ** | ||||||
| hg38:Y:10752486-T-G | ** | ||||||
| hg38:Y:10801705-T-A | ** | ||||||
| hg19:Y:13457700-C-G hg38:Y:11302024-C-G | ** | ||||||
| hg19:Y:28550536-G-T hg38:Y:26404389-G-T | ** | ||||||
| hg38:Y:10944375-C-A | ** | ||||||
| hg19:Y:19297902-C-A hg38:Y:17186022-C-A | ** | ||||||
| hg38:Y:11027289-T-A | ** | ||||||
| hg19:Y:15662334-C-A hg38:Y:13550454-C-A | ** | ||||||
| hg19:Y:18422836-C-A hg38:Y:16310956-C-A | P6_Gap | ** | |||||
| hg19:Y:8344243-T-C hg38:Y:8476202-T-C | ** | ||||||
| hg19:Y:5851229-C-A hg38:Y:5983188-C-A | ** | ||||||
| hg38:Y:10794693-T-G | ** | ||||||
| hg19:Y:5756108-G-T hg38:Y:5888067-G-T | ** | ||||||
| hg38:Y:10983493-T-C | ** | ||||||
| hg19:Y:20694272-T-C hg38:Y:18532386-T-C | P4_Prx | ** | |||||
| hg38:Y:10842514-C-G | ** | ||||||
| hg19:Y:9063678-C-A hg38:Y:9226069-C-A | ** | ||||||
| hg38:Y:10877315-C-T | FT191120 | ** | |||||
| hg38:Y:10801685-T-A | ** | ||||||
| hg38:Y:10985204-C-A | ** | ||||||
| hg19:Y:13698505-A-C hg38:Y:11542829-A-C | DYZ17 | ** | |||||
| hg19:Y:7102039-C-A hg38:Y:7233998-C-A | ** | ||||||
| hg19:Y:2685561-C-A hg38:Y:2817520-C-A | ** | ||||||
| hg38:Y:11645285-C-A | DYZ17 | ** | |||||
| hg38:Y:10946599-C-A | ** | ||||||
| hg19:Y:6772327-C-A hg38:Y:6904286-C-A | ** | ||||||
| hg19:Y:2718994-C-T hg38:Y:2850953-C-T | ** | ||||||
| hg19:Y:13698473-C-G hg38:Y:11542797-C-G | DYZ17 | ** | |||||
| hg19:Y:24254145-CA-C hg38:Y:22107998-CA-C | P3_b1 | ** | |||||
| hg19:Y:28505344-C-A hg38:Y:26359197-C-A | ** | ||||||
| hg38:Y:11671219-C-A | DYZ17 | ** | |||||
| hg38:Y:10685527-CACTCA-C | ** | ||||||
| hg19:Y:14228755-C-A hg38:Y:12108049-C-A | ** | ||||||
| hg19:Y:7099142-C-A hg38:Y:7231101-C-A | ** | ||||||
| hg38:Y:56830045-C-CTCCAA | ** | ||||||
| hg19:Y:16834608-G-A hg38:Y:14722728-G-A | ** | ||||||
| hg19:Y:17056510-A-C hg38:Y:14944630-A-C | ** | ||||||
| hg38:Y:11645282-C-T | FT449835 | DYZ17 | ** | ||||
| hg19:Y:2719032-C-G hg38:Y:2850991-C-G | ** | ||||||
| hg19:Y:16601470-G-A hg38:Y:14489590-G-A | ** | ||||||
| hg19:Y:10003479-C-A hg38:Y:10165870-C-A | ** | ||||||
| hg19:Y:21297399-G-T hg38:Y:19135513-G-T | ** | ||||||
| hg19:Y:28549311-C-T hg38:Y:26403164-C-T | ** | ||||||
| hg19:Y:16932852-G-T hg38:Y:14820972-G-T | ** | ||||||
| hg38:Y:10752461-A-T | ** | ||||||
| hg19:Y:13226435-C-A hg38:Y:11070759-C-A | ** | ||||||
| hg38:Y:11029672-A-C | ** | ||||||
| hg19:Y:7235105-C-A hg38:Y:7367064-C-A | ** | ||||||
| hg19:Y:16309325-A-C hg38:Y:14197445-A-C | ** | ||||||
| hg19:Y:19547310-C-T hg38:Y:17435430-C-T | ** | ||||||
| hg38:Y:10682584-C-A | ** | ||||||
| hg19:Y:10005943-C-A hg38:Y:10168334-C-A | FT255259 | ** | |||||
| hg19:Y:16601473-C-T hg38:Y:14489593-C-T | ** | ||||||
| hg19:Y:28763864-C-A hg38:Y:26617717-C-A | ** | ||||||
| hg19:Y:21875866-C-A hg38:Y:19713980-C-A | ** | ||||||
| hg38:Y:11027060-A-T | ** | ||||||
| hg19:Y:4902358-G-T hg38:Y:5034317-G-T | ** | ||||||
| hg19:Y:5796123-C-A hg38:Y:5928082-C-A | ** | ||||||
| hg38:Y:10940455-G-C | ** | ||||||
| hg38:Y:10822765-C-A | ** | ||||||
| hg38:Y:10822771-C-A | FT432755 | ** | |||||
| hg19:Y:3148066-C-A hg38:Y:3280025-C-A | ** | ||||||
| hg38:Y:10798342-A-T | ** | ||||||
| hg38:Y:11030264-T-A | ** | ||||||
| hg19:Y:6092323-C-A hg38:Y:6224282-C-A | ** | ||||||
| hg38:Y:11033900-C-A | ** | ||||||
| hg19:Y:28597131-C-A hg38:Y:26450984-C-A | ** | ||||||
| hg38:Y:10781525-A-C | ** | ||||||
| hg38:Y:10768567-T-C | ** | ||||||
| hg38:Y:10768568-G-A | ** | ||||||
| hg38:Y:10847277-C-A | ** | ||||||
| hg19:Y:7391253-CT-C hg38:Y:7523212-CT-C | ** | ||||||
| hg38:Y:11027033-C-T | ** | ||||||
| hg38:Y:10958389-C-CTTTAA | ** | ||||||
| hg38:Y:10940039-C-A | ** | ||||||
| hg38:Y:11026744-C-A | ** | ||||||
| hg38:Y:10817699-G-T | ** | ||||||
| hg38:Y:10842521-A-T | ** | ||||||
| hg38:Y:10798332-AT-A | ** | ||||||
| hg38:Y:10798353-T-C | ** | ||||||
| hg19:Y:7185164-A-C hg38:Y:7317123-A-C | ** | ||||||
| hg19:Y:9702967-GAA-G hg38:Y:9865358-GAA-G | IR3_Prx | 11×A | ** | ||||
| hg19:Y:19299256-C-A hg38:Y:17187376-C-A | ** | ||||||
| hg19:Y:6434625-C-A hg38:Y:6566584-C-A | ** | ||||||
| hg19:Y:19189516-C-T hg38:Y:17077636-C-T | ** | ||||||
| hg19:Y:16017707-C-A hg38:Y:13905827-C-A | ** | ||||||
| hg19:Y:9540132-TG-T hg38:Y:9702523-TG-T | IR3_Prx | ** | |||||
| hg19:Y:19547324-G-C hg38:Y:17435444-G-C | ** | ||||||
| hg19:Y:3716903-C-A hg38:Y:3848862-C-A | ** | ||||||
| hg19:Y:7108470-C-A hg38:Y:7240429-C-A | ** | ||||||
| hg19:Y:17222638-C-A hg38:Y:15110758-C-A | ** | ||||||
| hg38:Y:10793911-C-A | ** | ||||||
| hg38:Y:10950529-G-A | ** | ||||||
| hg19:Y:22426903-A-G hg38:Y:20265017-A-G | DYZ19 | ** | |||||
| hg19:Y:22253036-C-G hg38:Y:20091150-C-G | DYZ19 | ** | |||||
| hg19:Y:20566035-A-AAC hg38:Y:18404149-A-AAC | P5_Dst | ** | |||||
| hg19:Y:27499292-G-T hg38:Y:25353145-G-T | P1_Y2 | ** | |||||
| hg19:Y:7170116-C-A hg38:Y:7302075-C-A | ** | ||||||
| hg38:Y:10985198-C-T | ** | ||||||
| hg19:Y:4301912-C-A hg38:Y:4433871-C-A | ** | ||||||
| hg38:Y:10952487-T-C | ** | ||||||
| hg38:Y:10751053-C-G | ** | ||||||
| hg38:Y:11025471-C-A | ** | ||||||
| hg19:Y:16601515-G-T hg38:Y:14489635-G-T | ** | ||||||
| hg19:Y:13698498-C-G hg38:Y:11542822-C-G | DYZ17 | ** | |||||
| hg38:Y:11645307-T-G | DYZ17 | ** | |||||
| hg38:Y:11645312-G-T | DYZ17 | ** | |||||
| hg38:Y:11645313-G-T | FT449839 | DYZ17 | ** | ||||
| hg38:Y:11645321-A-T | DYZ17 | ** | |||||
| hg38:Y:11645322-T-G | DYZ17 | ** | |||||
| hg38:Y:11645327-G-A | DYZ17 | ** | |||||
| hg38:Y:11645328-G-T | FT425931 | DYZ17 | ** | ||||
| hg38:Y:10752465-A-T | ** | ||||||
| hg38:Y:10752476-C-T | ** | ||||||
| hg19:Y:15497972-ATTTTTTTT-A hg38:Y:13386092-ATTTTTTTT-A | 26×T | ** | |||||
| hg19:Y:18344533-G-GTA hg38:Y:16232653-G-GTA | P6_Prx | ** | |||||
| hg38:Y:10659528-A-T | ** | ||||||
| hg19:Y:22536257-C-A hg38:Y:20374371-C-A | ** | ||||||
| hg38:Y:10894722-CTCCATTCCATTCCATTCCATTCCATTCCAT-C | ** | ||||||
| hg38:Y:10666907-T-G | ** | ||||||
| hg19:Y:4003088-C-A hg38:Y:4135047-C-A | ** | ||||||
| hg19:Y:14561421-C-A hg38:Y:12449622-C-A | ** | ||||||
| hg19:Y:24875568-C-A hg38:Y:22729421-C-A | g1 | ** | |||||
| hg19:Y:24597814-T-TG hg38:Y:22451667-T-TG | P3_t2 | ** | |||||
| hg38:Y:10692035-C-A | ** | ||||||
| hg19:Y:15364790-C-A hg38:Y:13252910-C-A | ** | ||||||
| hg38:Y:10796632-C-G | ** | ||||||
| hg38:Y:10682590-T-A | ** | ||||||
| hg19:Y:6648195-C-A hg38:Y:6780154-C-A | ** | ||||||
| hg19:Y:2697528-C-A hg38:Y:2829487-C-A | ** | ||||||
| hg19:Y:2719031-C-T hg38:Y:2850990-C-T | ** | ||||||
| hg19:Y:2719038-C-A hg38:Y:2850997-C-A | ** | ||||||
| hg19:Y:2788434-T-G hg38:Y:2920393-T-G | ** | ||||||
| hg19:Y:3013334-C-A hg38:Y:3145293-C-A | ** | ||||||
| hg19:Y:3186728-T-C hg38:Y:3318687-T-C | ** | ||||||
| hg19:Y:3186729-G-A hg38:Y:3318688-G-A | ** | ||||||
| hg19:Y:3186734-T-C hg38:Y:3318693-T-C | ** | ||||||
| hg19:Y:3186742-A-T hg38:Y:3318701-A-T | ** | ||||||
| hg19:Y:3252601-C-A hg38:Y:3384560-C-A | ** | ||||||
| hg19:Y:3627939-C-A hg38:Y:3759898-C-A | ** | ||||||
| hg19:Y:3733354-C-A hg38:Y:3865313-C-A | ** | ||||||
| hg19:Y:3763418-C-T hg38:Y:3895377-C-T | ** | ||||||
| hg19:Y:3829137-A-G hg38:Y:3961096-A-G | ** | ||||||
| hg19:Y:3900449-C-T hg38:Y:4032408-C-T | ** | ||||||
| hg19:Y:4215464-G-T hg38:Y:4347423-G-T | ** | ||||||
| hg19:Y:4282545-A-G hg38:Y:4414504-A-G | ** | ||||||
| hg19:Y:4356981-C-A hg38:Y:4488940-C-A | ** | ||||||
| hg19:Y:4653177-A-G hg38:Y:4785136-A-G | ** | ||||||
| hg19:Y:4769306-A-T hg38:Y:4901265-A-T | ** | ||||||
| hg19:Y:4918911-C-A hg38:Y:5050870-C-A | ** | ||||||
| hg19:Y:4925437-T-C hg38:Y:5057396-T-C | ** | ||||||
| hg19:Y:5420749-A-C hg38:Y:5552708-A-C | ** | ||||||
| hg19:Y:5556739-G-T hg38:Y:5688698-G-T | ** | ||||||
| hg19:Y:5727270-C-A hg38:Y:5859229-C-A | ** | ||||||
| hg19:Y:5819805-C-A hg38:Y:5951764-C-A | FT12306 | ** | |||||
| hg19:Y:6124393-G-T hg38:Y:6256352-G-T | ** | ||||||
| hg19:Y:6247068-A-C hg38:Y:6379027-A-C | IR3_Dst | ** | |||||
| hg19:Y:6352833-T-C hg38:Y:6484792-T-C | ** | ||||||
| hg19:Y:6480514-A-G hg38:Y:6612473-A-G | ** | ||||||
| hg19:Y:6646220-C-A hg38:Y:6778179-C-A | ** | ||||||
| hg19:Y:6977481-C-A hg38:Y:7109440-C-A | ** | ||||||
| hg19:Y:6978102-A-T hg38:Y:7110061-A-T | ** | ||||||
| hg19:Y:7021527-G-A hg38:Y:7153486-G-A | ** | ||||||
| hg19:Y:7021538-CCA-C hg38:Y:7153497-CCA-C | ** | ||||||
| hg19:Y:7021544-G-GCC hg38:Y:7153503-G-GCC | ** | ||||||
| hg19:Y:7021560-C-T hg38:Y:7153519-C-T | ** | ||||||
| hg19:Y:7021574-A-G hg38:Y:7153533-A-G | ** | ||||||
| hg19:Y:7021581-C-T hg38:Y:7153540-C-T | ** | ||||||
| hg19:Y:7021582-A-G hg38:Y:7153541-A-G | ** | ||||||
| hg19:Y:7058443-T-G hg38:Y:7190402-T-G | ** | ||||||
| hg19:Y:7099191-A-T hg38:Y:7231150-A-T | ** | ||||||
| hg19:Y:7166878-G-T hg38:Y:7298837-G-T | ** | ||||||
| hg19:Y:7310580-T-C hg38:Y:7442539-T-C | ** | ||||||
| hg19:Y:7504810-C-G hg38:Y:7636769-C-G | IR1_L | ** | |||||
| hg19:Y:7757146-C-A hg38:Y:7889105-C-A | ** | ||||||
| hg19:Y:7868798-T-A hg38:Y:8000757-T-A | ** | ||||||
| hg19:Y:8043353-A-C hg38:Y:8175312-A-C | ** | ||||||
| hg19:Y:8741396-C-G hg38:Y:8873355-C-G | ** | ||||||
| hg19:Y:9351214-G-C hg38:Y:9513605-G-C | ** | ||||||
| hg19:Y:9411343-C-A hg38:Y:9573734-C-A | ** | ||||||
| hg19:Y:9769191-C-A hg38:Y:9931582-C-A | ** | ||||||
| hg19:Y:9955603-C-A hg38:Y:10117994-C-A | ** | ||||||
| hg38:Y:10625648-C-A | ** | ||||||
| hg38:Y:10655739-C-A | ** | ||||||
| hg38:Y:10658085-C-A | ** | ||||||
| hg38:Y:10659542-C-CGGATGATTCG | ** | ||||||
| hg38:Y:10668794-T-A | FT428774 | ** | |||||
| hg38:Y:10669466-T-TTGGAG | ** | ||||||
| hg38:Y:10683225-TTCCACTCCAC-T | ** | ||||||
| hg38:Y:10684198-T-G | ** | ||||||
| hg38:Y:10684206-CTCCAT-C | ** | ||||||
| hg38:Y:10690748-T-C | ** | ||||||
| hg38:Y:10746119-T-A | ** | ||||||
| hg38:Y:10750013-T-G | ** | ||||||
| hg38:Y:10751048-C-A | ** | ||||||
| hg38:Y:10761494-A-G | ** | ||||||
| hg38:Y:10767013-C-A | ** | ||||||
| hg38:Y:10768622-C-A | ** | ||||||
| hg38:Y:10768630-T-C | ** | ||||||
| hg38:Y:10781515-G-T | ** | ||||||
| hg38:Y:10781517-A-G | ** | ||||||
| hg38:Y:10781523-T-A | ** | ||||||
| hg38:Y:10781538-T-C | ** | ||||||
| hg38:Y:10788476-A-C | ** | ||||||
| hg38:Y:10796683-AT-A | ** | ||||||
| hg38:Y:10801683-A-G | ** | ||||||
| hg38:Y:10803970-C-G | ** | ||||||
| hg38:Y:10804012-A-C | ** | ||||||
| hg38:Y:10815451-C-A | ** | ||||||
| hg38:Y:10826863-C-A | ** | ||||||
| hg38:Y:10826876-C-A | ** | ||||||
| hg38:Y:10826914-C-CGATCT | ** | ||||||
| hg38:Y:10835301-C-T | ** | ||||||
| hg38:Y:10836734-G-T | ** | ||||||
| hg38:Y:10842497-CACAAT-C | ** | ||||||
| hg38:Y:10846404-T-A | ** | ||||||
| hg38:Y:10850750-C-A | ** | ||||||
| hg38:Y:10859965-C-G | ** | ||||||
| hg38:Y:10862180-C-G | ** | ||||||
| hg38:Y:10935445-T-G | ** | ||||||
| hg38:Y:10940430-C-G | ** | ||||||
| hg38:Y:10940439-T-G | ** | ||||||
| hg38:Y:10945345-G-T | ** | ||||||
| hg38:Y:10952488-T-C | ** | ||||||
| hg38:Y:10952510-C-G | ** | ||||||
| hg38:Y:10952530-C-A | ** | ||||||
| hg38:Y:10952531-A-ACTCAG | ** | ||||||
| hg38:Y:10952539-C-G | ** | ||||||
| hg38:Y:10952571-A-G | ** | ||||||
| hg38:Y:10952572-T-C | ** | ||||||
| hg38:Y:10952582-C-G | ** | ||||||
| hg38:Y:10952587-C-G | ** | ||||||
| hg38:Y:10972402-T-A | ** | ||||||
| hg38:Y:10972633-T-G | ** | ||||||
| hg38:Y:10975386-C-A | ** | ||||||
| hg38:Y:10983470-G-A | ** | ||||||
| hg38:Y:10986433-C-A | ** | ||||||
| hg38:Y:11014532-C-A | ** | ||||||
| hg38:Y:11020979-C-A | ** | ||||||
| hg38:Y:11032392-C-A | ** | ||||||
| hg19:Y:13196268-C-A hg38:Y:11040592-C-A | ** | ||||||
| hg19:Y:13222054-A-T hg38:Y:11066378-A-T | ** | ||||||
| hg19:Y:13239880-A-T hg38:Y:11084204-A-T | ** | ||||||
| hg19:Y:13256245-T-C hg38:Y:11100569-T-C | ** | ||||||
| hg19:Y:13258592-C-A hg38:Y:11102916-C-A | ** | ||||||
| hg19:Y:13258607-A-T hg38:Y:11102931-A-T | ** | ||||||
| hg19:Y:13258613-T-C hg38:Y:11102937-T-C | ** | ||||||
| hg19:Y:13278469-C-A hg38:Y:11122793-C-A | ** | ||||||
| hg19:Y:13323540-A-T hg38:Y:11167864-A-T | FT31907 | ** | |||||
| hg19:Y:13593616-T-A hg38:Y:11437940-T-A | ** | ||||||
| hg19:Y:13612684-C-A hg38:Y:11457008-C-A | ** | ||||||
| hg19:Y:13734514-T-C hg38:Y:11578838-T-C | DYZ17 | ** | |||||
| hg38:Y:11645242-A-C | DYZ17 | ** | |||||
| hg38:Y:11645250-A-G | DYZ17 | ** | |||||
| hg38:Y:11645253-A-G | DYZ17 | ** | |||||
| hg38:Y:11645256-C-T | FT449831 | DYZ17 | ** | ||||
| hg38:Y:11645267-G-A | DYZ17 | ** | |||||
| hg38:Y:11645279-A-G | DYZ17 | ** | |||||
| hg38:Y:11645281-G-C | DYZ17 | ** | |||||
| hg38:Y:11645287-C-G | FT230064 | DYZ17 | ** | ||||
| hg38:Y:11645355-A-C | DYZ17 | ** | |||||
| hg38:Y:11652354-G-T | DYZ17 | ** | |||||
| hg19:Y:13821303-G-T hg38:Y:11700597-G-T | DYZ17 | ** | |||||
| hg19:Y:13847209-AAATGGAATGG-A hg38:Y:11726503-AAATGGAATGG-A | DYZ17 | 4×AATGG | ** | ||||
| hg19:Y:13878559-A-G hg38:Y:11757853-A-G | ** | ||||||
| hg19:Y:14607951-A-G hg38:Y:12496153-A-G | ** | ||||||
| hg19:Y:14815449-A-C hg38:Y:12703520-A-C | ** | ||||||
| hg19:Y:14990174-A-G hg38:Y:12878259-A-G | ** | ||||||
| hg19:Y:15286162-G-A hg38:Y:13174261-G-A | ** | ||||||
| hg19:Y:15475117-C-A hg38:Y:13363237-C-A | ** | ||||||
| hg19:Y:15606811-C-A hg38:Y:13494931-C-A | ** | ||||||
| hg19:Y:15756419-C-A hg38:Y:13644539-C-A | ** | ||||||
| hg19:Y:16008643-T-G hg38:Y:13896763-T-G | ** | ||||||
| hg19:Y:16047757-C-A hg38:Y:13935877-C-A | ** | ||||||
| hg19:Y:16048876-C-A hg38:Y:13936996-C-A | ** | ||||||
| hg19:Y:16210681-G-T hg38:Y:14098801-G-T | ** | ||||||
| hg19:Y:16428712-C-A hg38:Y:14316832-C-A | ** | ||||||
| hg19:Y:16601458-G-T hg38:Y:14489578-G-T | ** | ||||||
| hg19:Y:16601471-G-C hg38:Y:14489591-G-C | ** | ||||||
| hg19:Y:16601472-G-A hg38:Y:14489592-G-A | ** | ||||||
| hg19:Y:16601479-T-C hg38:Y:14489599-T-C | ** | ||||||
| hg19:Y:16601493-TG-T hg38:Y:14489613-TG-T | ** | ||||||
| hg19:Y:16702167-G-T hg38:Y:14590287-G-T | ** | ||||||
| hg19:Y:16834591-C-T hg38:Y:14722711-C-T | ** | ||||||
| hg19:Y:16834616-G-A hg38:Y:14722736-G-A | ** | ||||||
| hg19:Y:16834621-C-T hg38:Y:14722741-C-T | ** | ||||||
| hg19:Y:16834635-TACTTGGGA-T hg38:Y:14722755-TACTTGGGA-T | ** | ||||||
| hg19:Y:16834665-T-A hg38:Y:14722785-T-A | ** | ||||||
| hg19:Y:16842789-C-G hg38:Y:14730909-C-G | ** | ||||||
| hg19:Y:16952659-A-G hg38:Y:14840779-A-G | ** | ||||||
| hg19:Y:17038891-T-G hg38:Y:14927011-T-G | ** | ||||||
| hg19:Y:17058688-C-T hg38:Y:14946808-C-T | ** | ||||||
| hg19:Y:17301238-CAAAAAAAAAA-C hg38:Y:15189358-CAAAAAAAAAA-C | 23×A | ** | |||||
| hg19:Y:17504212-C-T hg38:Y:15392332-C-T | ** | ||||||
| hg19:Y:17524100-C-A hg38:Y:15412220-C-A | ** | ||||||
| hg19:Y:17538193-C-A hg38:Y:15426313-C-A | ** | ||||||
| hg19:Y:17598035-T-C hg38:Y:15486155-T-C | ** | ||||||
| hg19:Y:17942103-C-A hg38:Y:15830223-C-A | 11×T | ** | |||||
| hg19:Y:17953718-A-C hg38:Y:15841838-A-C | ** | ||||||
| hg19:Y:18183290-A-G hg38:Y:16071410-A-G | ** | ||||||
| hg19:Y:18539324-G-T hg38:Y:16427444-G-T | ** | ||||||
| hg19:Y:18925420-A-G hg38:Y:16813540-A-G | ** | ||||||
| hg19:Y:18925421-C-A hg38:Y:16813541-C-A | ** | ||||||
| hg19:Y:18928678-G-A hg38:Y:16816798-G-A | ** | ||||||
| hg19:Y:18966170-C-A hg38:Y:16854290-C-A | ** | ||||||
| hg19:Y:18989157-C-A hg38:Y:16877277-C-A | ** | ||||||
| hg19:Y:19155959-C-A hg38:Y:17044079-C-A | ** | ||||||
| hg19:Y:19189565-A-T hg38:Y:17077685-A-T | ** | ||||||
| hg19:Y:19189579-C-G hg38:Y:17077699-C-G | ** | ||||||
| hg19:Y:19304050-A-G hg38:Y:17192170-A-G | ** | ||||||
| hg19:Y:19529146-C-A hg38:Y:17417266-C-A | ** | ||||||
| hg19:Y:19547288-C-T hg38:Y:17435408-C-T | ** | ||||||
| hg19:Y:19547296-A-G hg38:Y:17435416-A-G | ** | ||||||
| hg19:Y:19547347-G-C hg38:Y:17435467-G-C | ** | ||||||
| hg19:Y:19547348-G-A hg38:Y:17435468-G-A | ** | ||||||
| hg19:Y:19547357-G-A hg38:Y:17435477-G-A | ** | ||||||
| hg19:Y:19547374-A-G hg38:Y:17435494-A-G | ** | ||||||
| hg19:Y:19559029-G-C hg38:Y:17447149-G-C | ** | ||||||
| hg19:Y:19674150-G-T hg38:Y:17562270-G-T | P5_Prx | ** | |||||
| hg19:Y:19751206-C-A hg38:Y:17639326-C-A | P5_Prx | ** | |||||
| hg19:Y:19948292-T-A hg38:Y:17836412-T-A | P5_Prx | ** | |||||
| hg19:Y:20213204-C-A hg38:Y:18051318-C-A | P5_Dst | ** | |||||
| hg19:Y:20213210-C-A hg38:Y:18051324-C-A | P5_Dst | 6×CTT | ** | ||||
| hg19:Y:20213213-T-A hg38:Y:18051327-T-A | P5_Dst | ** | |||||
| hg19:Y:20213230-C-A hg38:Y:18051344-C-A | P5_Dst | ** | |||||
| hg19:Y:20420751-AAAAT-A hg38:Y:18258865-AAAAT-A | P5_Dst | ** | |||||
| hg19:Y:20566027-CAA-C hg38:Y:18404141-CAA-C | P5_Dst | ** | |||||
| hg19:Y:20725845-T-G hg38:Y:18563959-T-G | P4_Prx | ** | |||||
| hg19:Y:20726213-T-G hg38:Y:18564327-T-G | P4_Prx | ** | |||||
| hg19:Y:20726230-T-G hg38:Y:18564344-T-G | P4_Prx | ** | |||||
| hg19:Y:21018233-A-T hg38:Y:18856347-A-T | P4_Dst | ** | |||||
| hg19:Y:21018238-A-T hg38:Y:18856352-A-T | P4_Dst | ** | |||||
| hg19:Y:21018239-C-G hg38:Y:18856353-C-G | P4_Dst | ** | |||||
| hg19:Y:21076992-A-T hg38:Y:18915106-A-T | ** | ||||||
| hg19:Y:21297720-A-T hg38:Y:19135834-A-T | ** | ||||||
| hg19:Y:21450475-T-A hg38:Y:19288589-T-A | ** | ||||||
| hg19:Y:21450478-CA-C hg38:Y:19288592-CA-C | ** | ||||||
| hg19:Y:21450490-T-C hg38:Y:19288604-T-C | ** | ||||||
| hg19:Y:21450508-T-G hg38:Y:19288622-T-G | ** | ||||||
| hg19:Y:21450518-T-A hg38:Y:19288632-T-A | ** | ||||||
| hg19:Y:21450527-A-G hg38:Y:19288641-A-G | ** | ||||||
| hg19:Y:21450528-T-C hg38:Y:19288642-T-C | ** | ||||||
| hg19:Y:21450530-A-G hg38:Y:19288644-A-G | ** | ||||||
| hg19:Y:21450532-G-C hg38:Y:19288646-G-C | ** | ||||||
| hg19:Y:21450535-G-A hg38:Y:19288649-G-A | ** | ||||||
| hg19:Y:21450539-A-G hg38:Y:19288653-A-G | ** | ||||||
| hg19:Y:21450552-T-C hg38:Y:19288666-T-C | ** | ||||||
| hg19:Y:21450553-T-C hg38:Y:19288667-T-C | ** | ||||||
| hg19:Y:21503097-C-A hg38:Y:19341211-C-A | ** | ||||||
| hg19:Y:21847223-C-A hg38:Y:19685337-C-A | ** | ||||||
| hg19:Y:22133015-C-A hg38:Y:19971129-C-A | ** | ||||||
| hg19:Y:22285204-T-A hg38:Y:20123318-T-A | DYZ19 | ** | |||||
| hg19:Y:22285223-T-A hg38:Y:20123337-T-A | DYZ19 | ** | |||||
| hg19:Y:22285257-A-C hg38:Y:20123371-A-C | DYZ19 | ** | |||||
| hg19:Y:22615311-C-A hg38:Y:20453425-C-A | ** | ||||||
| hg19:Y:24047444-G-A hg38:Y:21901297-G-A | ** | ||||||
| hg19:Y:24513138-G-T hg38:Y:22366991-G-T | ** | ||||||
| hg19:Y:25587139-G-T hg38:Y:23440992-G-T | P1_gr1 | ** | |||||
| hg19:Y:26114655-A-T hg38:Y:23968508-A-T | P1_Y1 | ** | |||||
| hg19:Y:26272522-C-A hg38:Y:24126375-C-A | P1_Y1 | ** | |||||
| hg19:Y:26427354-C-A hg38:Y:24281207-C-A | P1_Y1 | ** | |||||
| hg19:Y:26834810-G-C hg38:Y:24688663-G-C | P1_g2 | ** | |||||
| hg19:Y:27633660-G-A hg38:Y:25487513-G-A | P1_Y2 | ** | |||||
| hg19:Y:27893903-C-A hg38:Y:25747756-C-A | P1_Y2 | ** | |||||
| hg19:Y:28513756-C-T hg38:Y:26367609-C-T | ** | ||||||
| hg19:Y:28650192-A-G hg38:Y:26504045-A-G | ** | ||||||
| hg19:Y:28708389-G-T hg38:Y:26562242-G-T | ** | ||||||
| hg38:Y:56749983-C-A | ** | ||||||
| hg38:Y:56851368-G-T | ** | ||||||
| hg38:Y:56857739-T-G | ** | ||||||
| hg38:Y2:36607-G-T | ** | ||||||
| hg19:Y:13476878-G-C hg38:Y:11321202-G-C | *** | ||||||
| hg19:Y:13476889-C-A hg38:Y:11321213-C-A | *** | ||||||
| hg38:Y:10878300-G-C,T | *** | ||||||
| hg19:Y:6693914-C-A hg38:Y:6825873-C-A | *** | ||||||
| hg19:Y:13476893-C-T hg38:Y:11321217-C-T | *** | ||||||
| hg38:Y:10777428-C-A | *** | ||||||
| hg19:Y:8735033-C-A hg38:Y:8866992-C-A | *** | ||||||
| hg19:Y:16703652-G-T hg38:Y:14591772-G-T | *** | ||||||
| hg19:Y:13489159-G-A hg38:Y:11333483-G-A | *** | ||||||
| hg19:Y:15743786-C-A hg38:Y:13631906-C-A | *** | ||||||
| hg19:Y:13489419-T-C hg38:Y:11333743-T-C | *** | ||||||
| hg38:Y:10954430-C-T | *** | ||||||
| hg19:Y:13456781-G-C hg38:Y:11301105-G-C | *** | ||||||
| hg19:Y:13476870-C-T hg38:Y:11321194-C-T | *** | ||||||
| hg19:Y:14395352-C-T hg38:Y:12274648-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 400595 | 9915928 | 8102497 | 7981804 |
| Used in age calculations | 9915928 | 8102497 | 7981804 |
| Counts of SNPs | 19 | 19 |
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