Lloyd
BigY2: B171492MDKA Birth:
AustraliaTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B171492 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22282539-C-T hg38:Y:20120653-C-T | DYZ19 | A* | |||||
| hg19:Y:13819990-G-GACCAC hg38:Y:11699284-G-GACCAC | DYZ17 | A* | |||||
| hg19:Y:28816651-A-C hg38:Y:26670504-A-C | A* | ||||||
| hg19:Y:9102478-G-A hg38:Y:9264869-G-A | BY157630 | Y | + | ||||
| hg19:Y:9645982-C-T hg38:Y:9808373-C-T | BY157659 | IR3_Prx | + | ||||
| hg19:Y:17606673-G-A hg38:Y:15494793-G-A | BY158056 | Y | Y | + | |||
| hg19:Y:17970168-C-T hg38:Y:15858288-C-T | BY158100 | Y | Y | + | |||
| hg19:Y:23523043-G-A hg38:Y:21361157-G-A | BY158578 | Y | Y | + | |||
| hg19:Y:28814364-A-G hg38:Y:26668217-A-G | * | ||||||
| hg19:Y:16291144-G-A hg38:Y:14179264-G-A | Y | Y | * | ||||
| hg19:Y:13809519-G-A hg38:Y:11688813-G-A | DYZ17 | ** | |||||
| hg19:Y:13809509-G-C hg38:Y:11688803-G-C | DYZ17 | ** | |||||
| hg19:Y:17691936-C-A hg38:Y:15580056-C-A | ** | ||||||
| hg19:Y:13461193-C-T hg38:Y:11305517-C-T | Z6318 | ** | |||||
| hg19:Y:2915056-C-T hg38:Y:3047015-C-T | 4×TTCT | ** | |||||
| hg19:Y:4063161-A-G hg38:Y:4195120-A-G | Z2056 | ** | |||||
| hg19:Y:8819393-T-C hg38:Y:8951352-T-C | ** | ||||||
| hg19:Y:13445955-A-C hg38:Y:11290279-A-C | ** | ||||||
| hg19:Y:19377236-AAAAG-A hg38:Y:17265356-AAAAG-A | 5×AAAG | ** | |||||
| hg19:Y:17673053-C-A hg38:Y:15561173-C-A | ** | ||||||
| hg19:Y:15911522-G-A hg38:Y:13799642-G-A | ** | ||||||
| hg19:Y:13985772-A-G hg38:Y:11865066-A-G | ** | ||||||
| hg38:Y:10784971-C-T | ** | ||||||
| hg38:Y:10784988-C-CTCCTT | ** | ||||||
| hg38:Y:10926688-C-CG | ** | ||||||
| hg38:Y:10961237-T-A | ** | ||||||
| hg38:Y:10767627-T-A | ** | ||||||
| hg19:Y:14831879-C-A hg38:Y:12719946-C-A | ** | ||||||
| hg19:Y:18709666-C-A hg38:Y:16597786-C-A | ** | ||||||
| hg38:Y:56844828-C-T | ** | ||||||
| hg38:Y:10926728-C-T | ** | ||||||
| hg19:Y:18420366-G-GA hg38:Y:16308486-G-GA | P6_Gap | 9×A | ** | ||||
| hg38:Y:10748049-T-A | ** | ||||||
| hg19:Y:19510289-TTTG-T hg38:Y:17398409-TTTG-T | ** | ||||||
| hg38:Y:11006448-A-C | ** | ||||||
| hg19:Y:13217853-C-A hg38:Y:11062177-C-A | ** | ||||||
| hg38:Y:10964239-T-C | ** | ||||||
| hg38:Y:11676882-G-A | DYZ17 | ** | |||||
| hg38:Y:11676891-G-T | DYZ17 | ** | |||||
| hg19:Y:13468184-A-T hg38:Y:11312508-A-T | ** | ||||||
| hg38:Y:11007495-A-T | ** | ||||||
| hg38:Y:11007504-T-A | ** | ||||||
| hg38:Y:10821952-T-A | ** | ||||||
| hg38:Y:10876713-T-C | ** | ||||||
| hg38:Y:10956431-T-C | ** | ||||||
| hg38:Y:10964227-C-T | ** | ||||||
| hg38:Y:10964231-CT-C | ** | ||||||
| hg38:Y:10964243-A-T | ** | ||||||
| hg38:Y:10964248-A-T | ** | ||||||
| hg38:Y:10964254-T-A | ** | ||||||
| hg19:Y:27447464-GT-G hg38:Y:25301317-GT-G | P1_Y2 | ** | |||||
| hg38:Y:10852258-T-C | ** | ||||||
| hg19:Y:19044552-C-A hg38:Y:16932672-C-A | ** | ||||||
| hg38:Y:11008291-T-G | ** | ||||||
| hg38:Y:10961220-T-C | ** | ||||||
| hg38:Y:10956391-T-C | FT438138 | ** | |||||
| hg38:Y:10876705-T-C | ** | ||||||
| hg38:Y:10956433-CCAATG-C | ** | ||||||
| hg38:Y:11676848-A-T | DYZ17 | ** | |||||
| hg38:Y:10898944-C-A | FT435876 | ** | |||||
| hg38:Y:10985202-T-TCCATTCAACC | ** | ||||||
| hg38:Y:10768697-C-T | ** | ||||||
| hg38:Y:10768698-C-A | ** | ||||||
| hg19:Y:25931647-GA-G hg38:Y:23785500-GA-G | P1_Y1 | ** | |||||
| hg38:Y:10685814-T-C | ** | ||||||
| hg38:Y:10759831-A-AC | ** | ||||||
| hg38:Y:10759832-T-TGAAC | ** | ||||||
| hg19:Y:21559807-C-A hg38:Y:19397921-C-A | ** | ||||||
| hg19:Y:15324186-A-C hg38:Y:13212304-A-C | ** | ||||||
| hg19:Y:6626803-C-A hg38:Y:6758762-C-A | ** | ||||||
| hg19:Y:13474035-C-A hg38:Y:11318359-C-A | ** | ||||||
| hg38:Y:10685763-A-T | ** | ||||||
| hg38:Y:10890178-C-A | ** | ||||||
| hg38:Y:10685862-C-A | ** | ||||||
| hg19:Y:13468240-C-A hg38:Y:11312564-C-A | ** | ||||||
| hg19:Y:13491146-C-A hg38:Y:11335470-C-A | ** | ||||||
| hg19:Y:22857809-C-A hg38:Y:20695923-C-A | ** | ||||||
| hg38:Y:10685800-TC-T | ** | ||||||
| hg19:Y:17334076-C-A hg38:Y:15222196-C-A | ** | ||||||
| hg19:Y:13468227-C-G hg38:Y:11312551-C-G | ** | ||||||
| hg19:Y:13468233-T-C hg38:Y:11312557-T-C | ** | ||||||
| hg38:Y:11008297-G-T | ** | ||||||
| hg19:Y:21115631-C-A hg38:Y:18953745-C-A | ** | ||||||
| hg19:Y:13872242-C-A hg38:Y:11751536-C-A | ** | ||||||
| hg19:Y:14464426-C-A hg38:Y:12343699-C-A | ** | ||||||
| hg38:Y:10664802-T-C | ** | ||||||
| hg38:Y:10994648-C-A | ** | ||||||
| hg38:Y:10685840-T-C | ** | ||||||
| hg19:Y:2747782-A-T hg38:Y:2879741-A-T | ** | ||||||
| hg38:Y:56850496-A-C | ** | ||||||
| hg38:Y:10825280-C-CGGATTA | ** | ||||||
| hg19:Y:15969956-TAAAA-T hg38:Y:13858076-TAAAA-T | 20×A | ** | |||||
| hg19:Y:21115702-C-A hg38:Y:18953816-C-A | ** | ||||||
| hg38:Y:56843272-A-T | ** | ||||||
| hg38:Y:56843287-C-A | ** | ||||||
| hg38:Y:56843288-T-C | ** | ||||||
| hg38:Y:56843317-T-C | ** | ||||||
| hg38:Y:56843323-G-A | ** | ||||||
| hg38:Y:56843351-A-C | ** | ||||||
| hg38:Y:56843352-G-A | ** | ||||||
| hg38:Y:10961216-T-C | ** | ||||||
| hg38:Y:10671018-T-C | ** | ||||||
| hg38:Y:10959649-C-A | ** | ||||||
| hg38:Y:11028145-C-A | ** | ||||||
| hg38:Y:10964194-C-G | ** | ||||||
| hg38:Y:10997923-C-A | ** | ||||||
| hg19:Y:3093369-C-A hg38:Y:3225328-C-A | ** | ||||||
| hg19:Y:7623588-C-A hg38:Y:7755547-C-A | ** | ||||||
| hg19:Y:8704322-C-A hg38:Y:8836281-C-A | ** | ||||||
| hg38:Y:10747827-T-G | ** | ||||||
| hg38:Y:10978952-CCCATT-C | ** | ||||||
| hg19:Y:13468191-G-A hg38:Y:11312515-G-A | ** | ||||||
| hg19:Y:5059653-A-C hg38:Y:5191612-A-C | ** | ||||||
| hg19:Y:15580401-TA-T hg38:Y:13468521-TA-T | 9×A | ** | |||||
| hg38:Y:11017536-T-C | ** | ||||||
| hg38:Y:10961218-T-C | ** | ||||||
| hg38:Y2:6976-T-G | ** | ||||||
| hg19:Y:14893128-C-A hg38:Y:12781194-C-A | ** | ||||||
| hg38:Y:10866480-T-C | ** | ||||||
| hg19:Y:24205389-C-A hg38:Y:22059242-C-A | P3_b1 | ** | |||||
| hg19:Y:8269935-C-A hg38:Y:8401894-C-A | ** | ||||||
| hg19:Y:14021276-C-A hg38:Y:11900570-C-A | ** | ||||||
| hg19:Y:2915060-T-C hg38:Y:3047019-T-C | ** | ||||||
| hg38:Y:11008288-T-C | ** | ||||||
| hg38:Y:11028188-T-C | ** | ||||||
| hg38:Y:56850515-G-C | ** | ||||||
| hg38:Y:10663465-C-A | ** | ||||||
| hg19:Y:23495737-C-A hg38:Y:21333851-C-A | ** | ||||||
| hg19:Y:14191248-C-A hg38:Y:12070542-C-A | ** | ||||||
| hg19:Y:18738224-C-A hg38:Y:16626344-C-A | ** | ||||||
| hg19:Y:14745096-C-A hg38:Y:12633165-C-A | ** | ||||||
| hg19:Y:21394847-C-A hg38:Y:19232961-C-A | ** | ||||||
| hg19:Y:2747786-A-T hg38:Y:2879745-A-T | 8×AT | ** | |||||
| hg19:Y:27423935-C-A hg38:Y:25277788-C-A | P1_g3 | ** | |||||
| hg19:Y:13461194-C-G hg38:Y:11305518-C-G | ** | ||||||
| hg19:Y:21073300-C-A hg38:Y:18911414-C-A | ** | ||||||
| hg19:Y:13946771-C-A hg38:Y:11826065-C-A | ** | ||||||
| hg38:Y:11028180-CATGCCA-C | ** | ||||||
| hg19:Y:6335225-A-C hg38:Y:6467184-A-C | IR3_Dst | ** | |||||
| hg38:Y:56850481-A-C | ** | ||||||
| hg38:Y:56850491-G-T | ** | ||||||
| hg38:Y:56850500-G-C | ** | ||||||
| hg19:Y:2885696-C-A hg38:Y:3017655-C-A | ** | ||||||
| hg19:Y:16442036-C-A hg38:Y:14330156-C-A | ** | ||||||
| hg19:Y:7081294-C-A hg38:Y:7213253-C-A | 8×T | ** | |||||
| hg38:Y:10686334-T-G | ** | ||||||
| hg19:Y:18937591-C-A hg38:Y:16825711-C-A | ** | ||||||
| hg19:Y:22796467-C-A hg38:Y:20634581-C-A | ** | ||||||
| hg19:Y:7532276-GTATATATATATATATATATATATATATATATATATATATA-G hg38:Y:7664235-GTATATATATATATATATATATATATATATATATATATATA-G | 28×TA | ** | |||||
| hg19:Y:6339132-CA-C hg38:Y:6471091-CA-C | IR3_Dst | ** | |||||
| hg19:Y:22027697-C-A hg38:Y:19865811-C-A | ** | ||||||
| hg19:Y:17821937-C-A hg38:Y:15710057-C-A | ** | ||||||
| hg38:Y:10685867-A-C | ** | ||||||
| hg19:Y:8070001-C-A hg38:Y:8201960-C-A | ** | ||||||
| hg38:Y:10758032-CTCCAT-C | ** | ||||||
| hg38:Y:11026093-T-A | ** | ||||||
| hg19:Y:15556858-C-A hg38:Y:13444978-C-A | ** | ||||||
| hg19:Y:15126284-C-A hg38:Y:13014371-C-A | ** | ||||||
| hg38:Y:56850525-T-A | ** | ||||||
| hg38:Y:10673672-C-G | ** | ||||||
| hg38:Y:10673675-T-A | ** | ||||||
| hg19:Y:13457632-C-A hg38:Y:11301956-C-A | ** | ||||||
| hg19:Y:14227795-C-A hg38:Y:12107089-C-A | ** | ||||||
| hg19:Y:4179006-C-A hg38:Y:4310965-C-A | ** | ||||||
| hg38:Y:10671020-C-G | ** | ||||||
| hg19:Y:9453893-C-A hg38:Y:9616284-C-A | ** | ||||||
| hg19:Y:9139930-TC-T hg38:Y:9302321-TC-T | ** | ||||||
| hg38:Y:10662876-C-A | ** | ||||||
| hg38:Y:10893034-C-A | ** | ||||||
| hg19:Y:23285294-C-A hg38:Y:21123408-C-A | ** | ||||||
| hg19:Y:13474760-G-A hg38:Y:11319084-G-A | ** | ||||||
| hg38:Y:10852263-T-C | ** | ||||||
| hg19:Y:23997404-G-T hg38:Y:21851257-G-T | FT369644 | ** | |||||
| hg19:Y:3271616-G-T hg38:Y:3403575-G-T | ** | ||||||
| hg19:Y:14295200-C-A hg38:Y:12174494-C-A | ** | ||||||
| hg19:Y:23875750-A-G hg38:Y:21713864-A-G | ** | ||||||
| hg38:Y:10769413-T-A | ** | ||||||
| hg38:Y:10769415-C-G | ** | ||||||
| hg19:Y:14030267-C-A hg38:Y:11909561-C-A | ** | ||||||
| hg19:Y:14969109-G-A hg38:Y:12857184-G-A | ** | ||||||
| hg38:Y:56850472-G-T | ** | ||||||
| hg19:Y:13253951-C-A hg38:Y:11098275-C-A | ** | ||||||
| hg38:Y:10685829-T-C | ** | ||||||
| hg19:Y:14614596-C-A hg38:Y:12502794-C-A | ** | ||||||
| hg19:Y:13512896-C-A hg38:Y:11357220-C-A | FT444605 | ** | |||||
| hg38:Y:10852238-T-C | ** | ||||||
| hg38:Y:10852246-T-C | ** | ||||||
| hg19:Y:18850273-C-A hg38:Y:16738393-C-A | ** | ||||||
| hg19:Y:3271528-C-A hg38:Y:3403487-C-A | ** | ||||||
| hg38:Y:10852299-T-C | ** | ||||||
| hg19:Y:2859193-T-A hg38:Y:2991152-T-A | ** | ||||||
| hg19:Y:3361648-G-T hg38:Y:3493607-G-T | ** | ||||||
| hg19:Y:3426999-G-T hg38:Y:3558958-G-T | ** | ||||||
| hg19:Y:3615472-GAAA-G hg38:Y:3747431-GAAA-G | 14×A | ** | |||||
| hg19:Y:3627784-A-C hg38:Y:3759743-A-C | ** | ||||||
| hg19:Y:3640863-T-G hg38:Y:3772822-T-G | ** | ||||||
| hg19:Y:3742861-G-T hg38:Y:3874820-G-T | ** | ||||||
| hg19:Y:3984559-G-T hg38:Y:4116518-G-T | ** | ||||||
| hg19:Y:3994803-C-A hg38:Y:4126762-C-A | ** | ||||||
| hg19:Y:4165411-G-A hg38:Y:4297370-G-A | ** | ||||||
| hg19:Y:4403003-C-A hg38:Y:4534962-C-A | ** | ||||||
| hg19:Y:4454821-G-T hg38:Y:4586780-G-T | ** | ||||||
| hg19:Y:4487419-G-T hg38:Y:4619378-G-T | ** | ||||||
| hg19:Y:4521529-C-A hg38:Y:4653488-C-A | ** | ||||||
| hg19:Y:4540192-G-T hg38:Y:4672151-G-T | ** | ||||||
| hg19:Y:4965626-G-T hg38:Y:5097585-G-T | ** | ||||||
| hg19:Y:5013217-C-A hg38:Y:5145176-C-A | ** | ||||||
| hg19:Y:5013252-C-A hg38:Y:5145211-C-A | ** | ||||||
| hg19:Y:5319898-C-CG hg38:Y:5451857-C-CG | ** | ||||||
| hg19:Y:5368290-G-T hg38:Y:5500249-G-T | ** | ||||||
| hg19:Y:5752703-C-A hg38:Y:5884662-C-A | ** | ||||||
| hg19:Y:5930419-C-A hg38:Y:6062378-C-A | ** | ||||||
| hg19:Y:6028442-AGCTGT-A hg38:Y:6160401-AGCTGT-A | ** | ||||||
| hg19:Y:6057481-G-T hg38:Y:6189440-G-T | ** | ||||||
| hg19:Y:6063423-C-A hg38:Y:6195382-C-A | ** | ||||||
| hg19:Y:6310854-C-A hg38:Y:6442813-C-A | IR3_Dst | ** | |||||
| hg19:Y:6644951-T-A hg38:Y:6776910-T-A | ** | ||||||
| hg19:Y:6645956-C-A hg38:Y:6777915-C-A | ** | ||||||
| hg19:Y:6795212-G-A hg38:Y:6927171-G-A | ** | ||||||
| hg19:Y:6839620-G-T hg38:Y:6971579-G-T | ** | ||||||
| hg19:Y:7183751-C-A hg38:Y:7315710-C-A | ** | ||||||
| hg19:Y:7185515-G-A hg38:Y:7317474-G-A | ** | ||||||
| hg19:Y:7190737-C-T hg38:Y:7322696-C-T | ** | ||||||
| hg19:Y:7285137-A-C hg38:Y:7417096-A-C | ** | ||||||
| hg19:Y:7305703-T-G hg38:Y:7437662-T-G | ** | ||||||
| hg19:Y:7374843-A-C hg38:Y:7506802-A-C | ** | ||||||
| hg19:Y:7524684-C-T hg38:Y:7656643-C-T | ** | ||||||
| hg19:Y:7524796-C-A hg38:Y:7656755-C-A | ** | ||||||
| hg19:Y:7640842-T-G hg38:Y:7772801-T-G | ** | ||||||
| hg19:Y:7759159-C-A hg38:Y:7891118-C-A | ** | ||||||
| hg19:Y:8073907-C-A hg38:Y:8205866-C-A | ** | ||||||
| hg19:Y:8075076-C-A hg38:Y:8207035-C-A | ** | ||||||
| hg19:Y:8817122-A-G hg38:Y:8949081-A-G | ** | ||||||
| hg19:Y:8849697-C-A hg38:Y:8981656-C-A | ** | ||||||
| hg19:Y:9040729-A-C hg38:Y:9203120-A-C | ** | ||||||
| hg19:Y:9472239-C-A hg38:Y:9634630-C-A | ** | ||||||
| hg19:Y:9474660-G-T hg38:Y:9637051-G-T | ** | ||||||
| hg19:Y:9603154-GTGGC-G hg38:Y:9765545-GTGGC-G | IR3_Prx | ** | |||||
| hg19:Y:9732929-T-C hg38:Y:9895320-T-C | IR3_Prx | ** | |||||
| hg19:Y:9852796-A-T hg38:Y:10015187-A-T | ** | ||||||
| hg19:Y:9892640-C-A hg38:Y:10055031-C-A | ** | ||||||
| hg19:Y:9935414-A-G hg38:Y:10097805-A-G | ** | ||||||
| hg19:Y:9941408-C-A hg38:Y:10103799-C-A | ** | ||||||
| hg19:Y:9944101-G-T hg38:Y:10106492-G-T | ** | ||||||
| hg19:Y:9977477-T-G hg38:Y:10139868-T-G | ** | ||||||
| hg38:Y:10664779-C-G | ** | ||||||
| hg38:Y:10667489-C-A | ** | ||||||
| hg38:Y:10671006-C-A | ** | ||||||
| hg38:Y:10685781-CA-C | ** | ||||||
| hg38:Y:10685788-A-G | ** | ||||||
| hg38:Y:10685836-A-T | ** | ||||||
| hg38:Y:10748529-G-T | ** | ||||||
| hg38:Y:10761690-T-G | ** | ||||||
| hg38:Y:10768721-T-TCCACG | ** | ||||||
| hg38:Y:10770994-C-A | ** | ||||||
| hg38:Y:10773095-A-G | ** | ||||||
| hg38:Y:10790939-C-T | ** | ||||||
| hg38:Y:10795446-T-G | ** | ||||||
| hg38:Y:10796476-C-A | ** | ||||||
| hg38:Y:10820364-CGTTCT-C | ** | ||||||
| hg38:Y:10820395-A-C | ** | ||||||
| hg38:Y:10820417-TCC-T | ** | ||||||
| hg38:Y:10820422-C-A | ** | ||||||
| hg38:Y:10820423-C-CAA | ** | ||||||
| hg38:Y:10820435-A-T | ** | ||||||
| hg38:Y:10820441-C-T | ** | ||||||
| hg38:Y:10821959-T-G | ** | ||||||
| hg38:Y:10832198-C-A | ** | ||||||
| hg38:Y:10832897-C-A | ** | ||||||
| hg38:Y:10852236-T-C | ** | ||||||
| hg38:Y:10859532-T-C | ** | ||||||
| hg38:Y:10892377-C-A | FT48549 | ** | |||||
| hg38:Y:10902117-C-A | ** | ||||||
| hg38:Y:10961232-A-T | ** | ||||||
| hg38:Y:10963309-A-C | ** | ||||||
| hg38:Y:10973102-C-A | ** | ||||||
| hg38:Y:10989828-C-A | ** | ||||||
| hg38:Y:11006438-A-T | ** | ||||||
| hg38:Y:11007507-C-A | ** | ||||||
| hg38:Y:11007509-A-C | ** | ||||||
| hg38:Y:11008277-T-G | ** | ||||||
| hg19:Y:13256060-T-G hg38:Y:11100384-T-G | ** | ||||||
| hg19:Y:13313859-C-A hg38:Y:11158183-C-A | ** | ||||||
| hg19:Y:13329704-T-C hg38:Y:11174028-T-C | ** | ||||||
| hg19:Y:13429359-C-A hg38:Y:11273683-C-A | ** | ||||||
| hg19:Y:13467919-G-A hg38:Y:11312243-G-A | ** | ||||||
| hg19:Y:13603441-C-G hg38:Y:11447765-C-G | ** | ||||||
| hg19:Y:13694087-C-A hg38:Y:11538411-C-A | DYZ17 | ** | |||||
| hg38:Y:11648155-G-T | DYZ17 | ** | |||||
| hg38:Y:11662961-C-A | DYZ17 | ** | |||||
| hg38:Y:11676546-C-A | DYZ17 | ** | |||||
| hg19:Y:13858415-G-T hg38:Y:11737709-G-T | DYZ17 | ** | |||||
| hg19:Y:13866896-A-T hg38:Y:11746190-A-T | DYZ17 | ** | |||||
| hg19:Y:14022054-C-G hg38:Y:11901348-C-G | ** | ||||||
| hg19:Y:14047236-C-A hg38:Y:11926530-C-A | ** | ||||||
| hg19:Y:14093593-C-A hg38:Y:11972887-C-A | ** | ||||||
| hg19:Y:14097907-G-A hg38:Y:11977201-G-A | ** | ||||||
| hg19:Y:14143416-A-AT hg38:Y:12022710-A-AT | ** | ||||||
| hg19:Y:14160277-C-A hg38:Y:12039571-C-A | ** | ||||||
| hg19:Y:14212179-C-A hg38:Y:12091473-C-A | ** | ||||||
| hg19:Y:14229221-T-C hg38:Y:12108515-T-C | ** | ||||||
| hg19:Y:14240517-C-T hg38:Y:12119811-C-T | ** | ||||||
| hg19:Y:14295199-C-A hg38:Y:12174493-C-A | ** | ||||||
| hg19:Y:14356470-C-A hg38:Y:12235765-C-A | ** | ||||||
| hg19:Y:14377090-C-A hg38:Y:12256386-C-A | ** | ||||||
| hg19:Y:14384518-T-C hg38:Y:12263814-T-C | ** | ||||||
| hg19:Y:14420304-G-T hg38:Y:12299579-G-T | ** | ||||||
| hg19:Y:14463383-G-A hg38:Y:12342656-G-A | ** | ||||||
| hg19:Y:14504652-T-G hg38:Y:12392857-T-G | ** | ||||||
| hg19:Y:14611797-G-A hg38:Y:12500003-G-A | ** | ||||||
| hg19:Y:14658220-C-T hg38:Y:12546285-C-T | ** | ||||||
| hg19:Y:14688706-ATTTAATCCAGGGAAATTTCAGTAAAGACTCCAGTGTC-A hg38:Y:12576772-ATTTAATCCAGGGAAATTTCAGTAAAGACTCCAGTGTC-A | ** | ||||||
| hg19:Y:14832093-A-C hg38:Y:12720160-A-C | ** | ||||||
| hg19:Y:14953620-T-A hg38:Y:12841694-T-A | ** | ||||||
| hg19:Y:14981808-T-G hg38:Y:12869884-T-G | ** | ||||||
| hg19:Y:15309782-C-A hg38:Y:13197887-C-A | ** | ||||||
| hg19:Y:15334461-C-G hg38:Y:13222579-C-G | ** | ||||||
| hg19:Y:15347041-A-G hg38:Y:13235160-A-G | ** | ||||||
| hg19:Y:15366517-A-C hg38:Y:13254637-A-C | ** | ||||||
| hg19:Y:15645254-T-C hg38:Y:13533374-T-C | ** | ||||||
| hg19:Y:15744325-C-A hg38:Y:13632445-C-A | ** | ||||||
| hg19:Y:15745666-G-T hg38:Y:13633786-G-T | ** | ||||||
| hg19:Y:15791405-G-T hg38:Y:13679525-G-T | ** | ||||||
| hg19:Y:16004144-C-A hg38:Y:13892264-C-A | ** | ||||||
| hg19:Y:16008700-A-G hg38:Y:13896820-A-G | ** | ||||||
| hg19:Y:16037140-A-C hg38:Y:13925260-A-C | ** | ||||||
| hg19:Y:16240671-C-A hg38:Y:14128791-C-A | ** | ||||||
| hg19:Y:16267360-C-A hg38:Y:14155480-C-A | ** | ||||||
| hg19:Y:16275975-G-T hg38:Y:14164095-G-T | ** | ||||||
| hg19:Y:16305896-G-T hg38:Y:14194016-G-T | ** | ||||||
| hg19:Y:16320187-A-G hg38:Y:14208307-A-G | ** | ||||||
| hg19:Y:16577007-T-G hg38:Y:14465127-T-G | ** | ||||||
| hg19:Y:16593929-AGTATATATGTGTGTACATATATATATATATATATATAT-A hg38:Y:14482049-AGTATATATGTGTGTACATATATATATATATATATATAT-A | ** | ||||||
| hg19:Y:16659056-G-A hg38:Y:14547176-G-A | ** | ||||||
| hg19:Y:17097531-C-A hg38:Y:14985651-C-A | ** | ||||||
| hg19:Y:17157652-T-C hg38:Y:15045772-T-C | ** | ||||||
| hg19:Y:17501222-C-A hg38:Y:15389342-C-A | ** | ||||||
| hg19:Y:18154376-G-T hg38:Y:16042496-G-T | ** | ||||||
| hg19:Y:18177136-C-A hg38:Y:16065256-C-A | ** | ||||||
| hg19:Y:18195877-C-A hg38:Y:16083997-C-A | ** | ||||||
| hg19:Y:18336153-A-T hg38:Y:16224273-A-T | P6_Prx | ** | |||||
| hg19:Y:18491473-G-GA hg38:Y:16379593-G-GA | P6_Dst | ** | |||||
| hg19:Y:18614344-A-T hg38:Y:16502464-A-T | ** | ||||||
| hg19:Y:18994458-T-G hg38:Y:16882578-T-G | ** | ||||||
| hg19:Y:19398139-CT-C hg38:Y:17286259-CT-C | ** | ||||||
| hg19:Y:19412797-C-A hg38:Y:17300917-C-A | ** | ||||||
| hg19:Y:19690212-AAATAT-A hg38:Y:17578332-AAATAT-A | P5_Prx | ** | |||||
| hg19:Y:19949606-T-G hg38:Y:17837726-T-G | P5_Prx | ** | |||||
| hg19:Y:20731011-T-A hg38:Y:18569125-T-A | P4_Prx | ** | |||||
| hg19:Y:20888966-TACTTA-T hg38:Y:18727080-TACTTA-T | P4_Dst | ** | |||||
| hg19:Y:20932984-T-G hg38:Y:18771098-T-G | P4_Dst | ** | |||||
| hg19:Y:20932985-GT-G hg38:Y:18771099-GT-G | P4_Dst | ** | |||||
| hg19:Y:21115645-T-G hg38:Y:18953759-T-G | ** | ||||||
| hg19:Y:21153136-A-G hg38:Y:18991250-A-G | ** | ||||||
| hg19:Y:21208534-C-A hg38:Y:19046648-C-A | ** | ||||||
| hg19:Y:21838894-T-TA hg38:Y:19677008-T-TA | ** | ||||||
| hg19:Y:21902145-G-A hg38:Y:19740259-G-A | ** | ||||||
| hg19:Y:21939950-C-A hg38:Y:19778064-C-A | ** | ||||||
| hg19:Y:21991308-C-A hg38:Y:19829422-C-A | ** | ||||||
| hg19:Y:22010365-G-A hg38:Y:19848479-G-A | ** | ||||||
| hg19:Y:22103974-A-T hg38:Y:19942088-A-T | ** | ||||||
| hg19:Y:22172298-C-A hg38:Y:20010412-C-A | ** | ||||||
| hg19:Y:22489547-C-A hg38:Y:20327661-C-A | DYZ19 | ** | |||||
| hg19:Y:22637702-C-A hg38:Y:20475816-C-A | ** | ||||||
| hg19:Y:22647450-T-A hg38:Y:20485564-T-A | ** | ||||||
| hg19:Y:22658882-G-T hg38:Y:20496996-G-T | ** | ||||||
| hg19:Y:22846000-A-G hg38:Y:20684114-A-G | ** | ||||||
| hg19:Y:22902004-T-G hg38:Y:20740118-T-G | ** | ||||||
| hg19:Y:23293578-G-A hg38:Y:21131692-G-A | ** | ||||||
| hg19:Y:23422961-C-A hg38:Y:21261075-C-A | ** | ||||||
| hg19:Y:23801616-A-C hg38:Y:21639730-A-C | ** | ||||||
| hg19:Y:24050248-C-A hg38:Y:21904101-C-A | P3_b1 | ** | |||||
| hg19:Y:24286946-T-A hg38:Y:22140799-T-A | P3_t1 | ** | |||||
| hg19:Y:24286948-G-C hg38:Y:22140801-G-C | P3_t1 | ** | |||||
| hg19:Y:24880306-C-A hg38:Y:22734159-C-A | g1 | ** | |||||
| hg19:Y:25931619-G-T hg38:Y:23785472-G-T | P1_Y1 | ** | |||||
| hg19:Y:25984699-T-A hg38:Y:23838552-T-A | P1_Y1 | ** | |||||
| hg19:Y:26386250-A-G hg38:Y:24240103-A-G | P1_Y1 | ** | |||||
| hg19:Y:26386253-A-G hg38:Y:24240106-A-G | P1_Y1 | ** | |||||
| hg19:Y:26386272-G-GT hg38:Y:24240125-G-GT | P1_Y1 | ** | |||||
| hg19:Y:26386285-A-AC hg38:Y:24240138-A-AC | P1_Y1 | ** | |||||
| hg19:Y:27637231-C-A hg38:Y:25491084-C-A | P1_Y2 | ** | |||||
| hg19:Y:27637241-T-A hg38:Y:25491094-T-A | P1_Y2 | ** | |||||
| hg19:Y:27889654-CAAAAAAT-C hg38:Y:25743507-CAAAAAAT-C | P1_Y2 | ** | |||||
| hg19:Y:28516136-G-A hg38:Y:26369989-G-A | ** | ||||||
| hg19:Y:28605809-C-A hg38:Y:26459662-C-A | ** | ||||||
| hg19:Y:28624394-T-C hg38:Y:26478247-T-C | ** | ||||||
| hg19:Y:28776112-A-C hg38:Y:26629965-A-C | ** | ||||||
| hg19:Y:28782800-C-A hg38:Y:26636653-C-A | ** | ||||||
| hg38:Y:56838181-G-T | ** | ||||||
| hg19:Y:58982491-C-A,T hg38:Y:56836344-C-A,T | *** | ||||||
| hg19:Y:22264271-C-A hg38:Y:20102385-C-A | DYZ19 | *** | |||||
| hg19:Y:23860479-AT-A hg38:Y:21698593-AT-A | 9×T | *** | |||||
| hg38:Y:11017528-C-A | *** | ||||||
| hg19:Y:24406715-C-A hg38:Y:22260568-C-A | *** | ||||||
| hg19:Y:18717849-C-A hg38:Y:16605969-C-A | *** | ||||||
| hg38:Y:10682522-CAT-C | *** | ||||||
| hg38:Y:11643692-T-C | DYZ17 | *** | |||||
| hg19:Y:9183737-C-A hg38:Y:9346128-C-A | *** | ||||||
| hg19:Y:13489119-GCTGGATGAGCTC-G,GCTGGATGAACTC hg38:Y:11333443-GCTGGATGAGCTC-G,GCTGGATGAACTC | *** | ||||||
| hg19:Y:24961236-C-A hg38:Y:22815089-C-A | g1 | *** | |||||
| hg19:Y:21442973-CT-C hg38:Y:19281087-CT-C | *** | ||||||
| hg19:Y:16427489-C-A hg38:Y:14315609-C-A | *** | ||||||
| hg19:Y:13859412-A-AG hg38:Y:11738706-A-AG | DYZ17 | *** | |||||
| hg19:Y:19449428-GAAAA-G hg38:Y:17337548-GAAAA-G | 23×A | *** | |||||
| hg38:Y:11017526-A-C | *** | ||||||
| hg19:Y:15572383-C-A hg38:Y:13460503-C-A | *** | ||||||
| hg19:Y:8703020-TACAC-T hg38:Y:8834979-TACAC-T | 11×AC | *** | |||||
| hg19:Y:14073649-C-A hg38:Y:11952943-C-A | *** | ||||||
| hg19:Y:17904081-C-CTT hg38:Y:15792201-C-CTT | 12×T | *** | |||||
| hg19:Y:9005825-G-T hg38:Y:9168216-G-T | *** | ||||||
| hg19:Y:5011278-C-A hg38:Y:5143237-C-A | *** | ||||||
| hg19:Y:17029305-C-A hg38:Y:14917425-C-A | *** | ||||||
| hg19:Y:7134863-C-A hg38:Y:7266822-C-A | *** | ||||||
| hg38:Y:10657291-A-T | *** | ||||||
| hg38:Y:11017521-G-C | *** | ||||||
| hg38:Y:11017539-C-T | *** | ||||||
| hg38:Y:56834844-C-A | *** | ||||||
| hg19:Y:2909471-C-A hg38:Y:3041430-C-A | *** | ||||||
| hg19:Y:17387258-TTA-T hg38:Y:15275378-TTA-T | *** | ||||||
| hg38:Y:10747000-T-A | *** | ||||||
| hg19:Y:3847094-C-A hg38:Y:3979053-C-A | *** | ||||||
| hg19:Y:17375933-G-T hg38:Y:15264053-G-T | *** | ||||||
| hg19:Y:19492290-CAAAAAAAAAAAAAAAAAA-C hg38:Y:17380410-CAAAAAAAAAAAAAAAAAA-C | 37×A | *** | |||||
| hg38:Y:10893877-C-A | *** | ||||||
| hg19:Y:18838448-C-G hg38:Y:16726568-C-G | *** | ||||||
| hg19:Y:18838454-T-C hg38:Y:16726574-T-C | *** | ||||||
| hg19:Y:6768885-CTTT-C,CTTTT hg38:Y:6900844-CTTT-C,CTTTT | 17×T | *** | |||||
| hg19:Y:2907446-C-A hg38:Y:3039405-C-A | *** | ||||||
| hg19:Y:2907479-T-C hg38:Y:3039438-T-C | *** | ||||||
| hg19:Y:4325895-G-A hg38:Y:4457854-G-A | *** | ||||||
| hg19:Y:8706675-CAGAGAGAG-C,CAG hg38:Y:8838634-CAGAGAGAG-C,CAG | 15×AG | *** | |||||
| hg19:Y:8756789-G-GA,GAA hg38:Y:8888748-G-GA,GAA | 10×A | *** | |||||
| hg19:Y:9062020-C-A hg38:Y:9224411-C-A | *** | ||||||
| hg19:Y:10029100-C-A hg38:Y:10191491-C-A | *** | ||||||
| hg38:Y:10895010-C-A | *** | ||||||
| hg38:Y:11003743-C-A,T | *** | ||||||
| hg38:Y:11026078-C-G | *** | ||||||
| hg19:Y:13255606-C-A hg38:Y:11099930-C-A | *** | ||||||
| hg19:Y:13859403-T-A,C hg38:Y:11738697-T-A,C | DYZ17 | *** | |||||
| hg19:Y:14103145-C-A hg38:Y:11982439-C-A | *** | ||||||
| hg19:Y:14251933-AAT-A hg38:Y:12131227-AAT-A | *** | ||||||
| hg19:Y:14600542-C-A hg38:Y:12488742-C-A | *** | ||||||
| hg19:Y:15993707-C-A hg38:Y:13881827-C-A | *** | ||||||
| hg19:Y:16134670-C-A hg38:Y:14022790-C-A | P8_Spc | *** | |||||
| hg19:Y:16570506-A-G hg38:Y:14458626-A-G | *** | ||||||
| hg19:Y:17246596-A-G hg38:Y:15134716-A-G | *** | ||||||
| hg19:Y:17374793-C-T hg38:Y:15262913-C-T | *** | ||||||
| hg19:Y:17878424-C-A hg38:Y:15766544-C-A | *** | ||||||
| hg19:Y:19048928-TAAAA-T hg38:Y:16937048-TAAAA-T | 18×A | *** | |||||
| hg19:Y:19206942-ATATAT-A hg38:Y:17095062-ATATAT-A | *** | ||||||
| hg19:Y:22949512-CTTTT-C hg38:Y:20787626-CTTTT-C | 17×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B171492 | 9250154 | 7565486 | 7475019 |
| Used in age calculations | 9250154 | 7565486 | 7475019 |
| Counts of SNPs | 4 | 5 |
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