Andersson
BigY2: 120453MDKA Birth: Sweden
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 120453 |
---|---|---|---|---|---|---|---|---|
28817683-G-T | 26671536-G-T | A* | ||||||
20728872-G-C | 18566986-G-C | P4_Prx | A* | |||||
20731207-C-T | 18569321-C-T | P4_Prx | A* | |||||
22252782-C-G | 20090896-C-G | DYZ19 | A* | |||||
22291594-A-T | 20129708-A-T | DYZ19 | A* | |||||
24303794-C-T | 22157647-C-T | P3_t1 | A* | |||||
28816783-G-A | 26670636-G-A | A* | ||||||
2655133-G-A | 2787092-G-A | Y | Y | + | ||||
2690863-C-T | 2822822-C-T | Y | Y | + | ||||
6852994-G-A | 6984953-G-A | Y | Y | + | ||||
7785076-G-A | 7917035-G-A | Y | Y | + | ||||
8012177-G-A | 8144136-G-A | Y | Y | + | ||||
8226655-C-A | 8358614-C-A | Y | Y | + | ||||
8544548-TAC-T | 8676507-TAC-T | + | ||||||
9791856-A-T | 9954247-A-T | BY81030 | Y | + | ||||
14138213-AC-A | 12017507-AC-A | + | ||||||
15703541-A-C | 13591661-A-C | Y | Y | + | ||||
16966284-C-T | 14854404-C-T | Y | Y | + | ||||
17477267-T-C | 15365387-T-C | Y | Y | + | ||||
18383765-A-G | 16271885-A-G | P6_Gap | + | |||||
19484083-A-G | 17372203-A-G | Y | + | |||||
21369271-C-G | 19207385-C-G | Y | Y | + | ||||
9353-A-T | + | |||||||
25096448-G-GGAAAGAAAGAAA | 22950301-G-GGAAAGAAAGAAA | g1 | 20×GAAA | * | ||||
22254414-C-G | 20092528-C-G | DYZ19 | * | |||||
22257804-G-A | 20095918-G-A | DYZ19 | * | |||||
6948124-G-T | 7080083-G-T | FT327104 | ** | |||||
21148589-C-A | 18986703-C-A | 30×A | ** | |||||
13878588-GAA-G | 11757882-GAA-G | 11×A | ** | |||||
20998279-T-G | 18836393-T-G | P4_Dst | ** | |||||
9040171-G-A | 9202562-G-A | BY414 | ** | |||||
4841730-G-A | 4973689-G-A | ** | ||||||
10894747-T-A | ** | |||||||
10894757-T-C | ** | |||||||
5841996-C-A | 5973955-C-A | ** | ||||||
7534661-G-GA | 7666620-G-GA | ** | ||||||
18423874-C-A | 16311994-C-A | P6_Gap | 12×A | ** | ||||
10894739-C-G | ** | |||||||
6134687-T-G | 6266646-T-G | ** | ||||||
10882097-T-C | ** | |||||||
15785989-ATT-A | 13674109-ATT-A | 11×T | ** | |||||
10877814-A-C | ** | |||||||
10877816-TC-T | ** | |||||||
10877844-A-C | ** | |||||||
10877855-C-T | ** | |||||||
21700613-G-A | 19538727-G-A | ** | ||||||
24931843-C-A | 22785696-C-A | g1 | ** | |||||
8160178-CAAAA-C | 8292137-CAAAA-C | 20×A | ** | |||||
25990657-T-G | 23844510-T-G | P1_Y1 | ** | |||||
22146420-C-A | 19984534-C-A | ** | ||||||
10927815-T-A | ** | |||||||
10927819-C-A | ** | |||||||
22808833-C-A | 20646947-C-A | FTB34403 | ** | |||||
16432616-C-A | 14320736-C-A | ** | ||||||
13480431-C-A | 11324755-C-A | ** | ||||||
13480445-C-T | 11324769-C-T | ** | ||||||
10678581-T-G | ** | |||||||
22809926-C-A | 20648040-C-A | ** | ||||||
8069959-A-ATT | 8201918-A-ATT | 19×T | ** | |||||
4700329-C-A | 4832288-C-A | ** | ||||||
10878297-TCAG-T | ** | |||||||
10878302-C-CCAT | ** | |||||||
10878313-C-G | ** | |||||||
10672795-C-A | ** | |||||||
27801254-T-A | 25655107-T-A | P1_Y2 | ** | |||||
2682778-C-A | 2814737-C-A | ** | ||||||
14430416-C-A | 12309689-C-A | ** | ||||||
6882478-CT-C | 7014437-CT-C | 10×T | ** | |||||
56724769-G-T | ** | |||||||
10809099-TTTCGATTCTG-T | ** | |||||||
4302234-C-A | 4434193-C-A | ** | ||||||
15323711-G-A | 13211829-G-A | ** | ||||||
16539592-C-A | 14427712-C-A | ** | ||||||
28532709-C-A | 26386562-C-A | ** | ||||||
56838561-G-T | ** | |||||||
10808797-A-C | ** | |||||||
14926441-C-G | 12814506-C-G | ** | ||||||
2729646-G-T | 2861605-G-T | ** | ||||||
10760470-T-A | ** | |||||||
10760471-A-T | ** | |||||||
10760474-T-C | ** | |||||||
10760484-A-C | ** | |||||||
10760488-T-G | ** | |||||||
10974037-C-T | ** | |||||||
10984562-G-T | ** | |||||||
13510137-C-A | 11354461-C-A | ** | ||||||
14711894-C-A | 12599961-C-A | ** | ||||||
21279012-C-A | 19117126-C-A | ** | ||||||
13486793-C-A | 11331117-C-A | ** | ||||||
10758041-A-G | ** | |||||||
13461024-C-T | 11305348-C-T | ** | ||||||
14114788-T-G | 11994082-T-G | ** | ||||||
21182396-T-G | 19020510-T-G | ** | ||||||
28779053-C-A | 26632906-C-A | ** | ||||||
16041016-G-A | 13929136-G-A | ** | ||||||
9507982-CTTTTT-C | 9670373-CTTTTT-C | 34×T | ** | |||||
21072380-C-A | 18910494-C-A | ** | ||||||
28460935-C-A | 26314788-C-A | ** | ||||||
7363151-C-A | 7495110-C-A | ** | ||||||
2905857-C-CTT | 3037816-C-CTT | 15×T | ** | |||||
21455425-C-A | 19293539-C-A | ** | ||||||
10683178-C-A | ** | |||||||
13902823-C-A | 11782117-C-A | ** | ||||||
6402650-G-A | 6534609-G-A | ** | ||||||
56839260-G-T | ** | |||||||
17372089-C-A | 15260209-C-A | ** | ||||||
10878289-C-T | ** | |||||||
13887495-C-G | 11766789-C-G | ** | ||||||
9057285-C-A | ** | |||||||
14766597-C-T | 12654666-C-T | 8×T | ** | |||||
14774277-TTTTTG-T | 12662346-TTTTTG-T | ** | ||||||
30964-C-T | ** | |||||||
27801245-G-A | 25655098-G-A | P1_Y2 | 8×A | ** | ||||
16777998-C-A | 14666118-C-A | ** | ||||||
14586238-G-T | 12474438-G-T | ** | ||||||
16598633-C-A | 14486753-C-A | ** | ||||||
22661975-C-A | 20500089-C-A | ** | ||||||
2817056-ATT-A | 2949015-ATT-A | 13×T | ** | |||||
14384988-T-G | 12264284-T-G | ** | ||||||
28782148-C-A | 26636001-C-A | ** | ||||||
56829909-G-T | ** | |||||||
15971245-C-A | 13859365-C-A | ** | ||||||
9577017-CAAAA-C | 9739408-CAAAA-C | IR3_Prx | 15×A | ** | ||||
22920654-C-A | 20758768-C-A | ** | ||||||
6516806-C-A | 6648765-C-A | ** | ||||||
23009985-G-T | 20848099-G-T | ** | ||||||
25849162-T-TC | 23703015-T-TC | P1_Y1 | ** | |||||
4261898-C-A | 4393857-C-A | ** | ||||||
15600032-C-A | 13488152-C-A | ** | ||||||
13871448-C-A | 11750742-C-A | ** | ||||||
11003965-C-A | ** | |||||||
6645497-CA-C | 6777456-CA-C | ** | ||||||
10993069-C-A | ** | |||||||
13919101-C-A | 11798395-C-A | ** | ||||||
13250107-C-A | 11094431-C-A | ** | ||||||
19544476-C-A | 17432596-C-A | ** | ||||||
19844736-C-A | 17732856-C-A | P5_Prx | ** | |||||
19448378-C-A | 17336498-C-A | ** | ||||||
7142241-C-A | 7274200-C-A | ** | ||||||
23204430-C-A | 21042544-C-A | ** | ||||||
15746356-C-A | 13634476-C-A | ** | ||||||
10800796-G-A | ** | |||||||
15386404-G-A | 13274524-G-A | ** | ||||||
4969226-C-A | 5101185-C-A | ** | ||||||
17511758-C-A | 15399878-C-A | ** | ||||||
3877061-C-A | 4009020-C-A | ** | ||||||
13513405-C-A | 11357729-C-A | ** | ||||||
28500070-C-A | 26353923-C-A | ** | ||||||
13989167-C-A | 11868461-C-A | ** | ||||||
22842265-C-A | 20680379-C-A | ** | ||||||
14295457-C-A | 12174751-C-A | ** | ||||||
14428172-C-A | 12307447-C-A | ** | ||||||
3609605-C-A | 3741564-C-A | ** | ||||||
15786599-C-A | 13674719-C-A | ** | ||||||
21368755-C-A | 19206869-C-A | ** | ||||||
14538043-T-G | 12426244-T-G | ** | ||||||
14142396-C-A | 12021690-C-A | ** | ||||||
10829125-C-A | ** | |||||||
17032705-C-A | 14920825-C-A | ** | ||||||
17628740-G-T | 15516860-G-T | ** | ||||||
15495136-C-A | 13383256-C-A | ** | ||||||
17042885-C-A | 14931005-C-A | ** | ||||||
21818928-A-G | 19657042-A-G | ** | ||||||
20409495-G-T | 18247609-G-T | P5_Dst | ** | |||||
14052900-C-A | 11932194-C-A | FT422639 | ** | |||||
5870133-C-A | 6002092-C-A | ** | ||||||
27583270-A-T | 25437123-A-T | P1_Y2 | ** | |||||
22134127-C-A | 19972241-C-A | ** | ||||||
10804930-C-A | ** | |||||||
28678934-C-A | 26532787-C-A | ** | ||||||
10793571-C-A | ** | |||||||
10659375-G-T | ** | |||||||
7897659-G-T | 8029618-G-T | ** | ||||||
13887533-C-A | 11766827-C-A | ** | ||||||
9442212-C-A | 9604603-C-A | ** | ||||||
7860184-C-A | 7992143-C-A | ** | ||||||
9892523-C-A | 10054914-C-A | ** | ||||||
20802924-C-A | 18641038-C-A | P4_Gap | ** | |||||
6039685-C-A | 6171644-C-A | ** | ||||||
15647961-C-A | 13536081-C-A | ** | ||||||
17968919-C-A | 15857039-C-A | ** | ||||||
6058462-C-A | 6190421-C-A | ** | ||||||
6731327-C-A | 6863286-C-A | ** | ||||||
22124075-C-A | 19962189-C-A | ** | ||||||
6064238-C-A | 6196197-C-A | ** | ||||||
2915136-C-A | 3047095-C-A | ** | ||||||
8636029-C-A | 8767988-C-A | ** | ||||||
22146413-C-A | 19984527-C-A | ** | ||||||
22965702-C-A | 20803816-C-A | ** | ||||||
10804912-C-T | ** | |||||||
16607945-C-A | 14496065-C-A | ** | ||||||
4174430-C-A | 4306389-C-A | ** | ||||||
17503302-C-A | 15391422-C-A | ** | ||||||
13571686-G-T | 11416010-G-T | ** | ||||||
13901930-C-A | 11781224-C-A | ** | ||||||
21563061-C-A | 19401175-C-A | ** | ||||||
4261949-C-A | 4393908-C-A | ** | ||||||
5858410-C-A | 5990369-C-A | ** | ||||||
13282789-C-A | 11127113-C-A | ** | ||||||
24458622-G-T | 22312475-G-T | ** | ||||||
10804925-C-CA | ** | |||||||
10804946-T-A | ** | |||||||
10804948-CC-G | ** | |||||||
10804975-A-T | ** | |||||||
10804979-C-A | ** | |||||||
6492604-C-A | 6624563-C-A | ** | ||||||
9537705-TGTG-T | 9700096-TGTG-T | IR3_Prx | ** | |||||
15753176-CT-C | 13641296-CT-C | ** | ||||||
7043518-C-A | 7175477-C-A | ** | ||||||
18158438-C-A | 16046558-C-A | FGC47354 | ** | |||||
7160864-T-C | 7292823-T-C | ** | ||||||
9952072-C-A | 10114463-C-A | ** | ||||||
10973947-C-CAATTT | ** | |||||||
18413358-A-AT | 16301478-A-AT | P6_Gap | 9×T | ** | ||||
6516835-C-A | 6648794-C-A | ** | ||||||
19247029-C-A | 17135149-C-A | ** | ||||||
21048337-C-A | 18886451-C-A | ** | ||||||
22134099-C-A | 19972213-C-A | ** | ||||||
21315139-C-A | 19153253-C-A | ** | ||||||
14518719-C-A | 12406920-C-A | ** | ||||||
7159204-C-A | 7291163-C-A | ** | ||||||
16050048-C-A | 13938168-C-A | ** | ||||||
8668394-C-A | 8800353-C-A | ** | ||||||
7664675-C-A | 7796634-C-A | ** | ||||||
10780239-G-T | ** | |||||||
13938722-G-C | 11818016-G-C | ** | ||||||
4101243-C-A | 4233202-C-A | ** | ||||||
4070718-C-A | 4202677-C-A | ** | ||||||
16760132-C-A | 14648252-C-A | ** | ||||||
14518401-C-T | 12406602-C-T | ** | ||||||
7155442-C-A | 7287401-C-A | ** | ||||||
23317711-A-C | 21155825-A-C | ** | ||||||
10860656-C-A | ** | |||||||
22263586-C-A | 20101700-C-A | DYZ19 | ** | |||||
5212738-C-A | 5344697-C-A | ** | ||||||
18343623-T-C | 16231743-T-C | P6_Prx | ** | |||||
28716407-C-A | 26570260-C-A | ** | ||||||
13488697-C-A | 11333021-C-A | ** | ||||||
16635875-C-A | 14523995-C-A | ** | ||||||
21283207-TA-T | 19121321-TA-T | 8×A | ** | |||||
10901786-C-A | ** | |||||||
4177879-C-A | 4309838-C-A | ** | ||||||
5627615-C-A | 5759574-C-A | ** | ||||||
16602836-G-A | 14490956-G-A | ** | ||||||
21334704-C-A | 19172818-C-A | ** | ||||||
11672932-G-T | ** | |||||||
17002825-C-A | 14890945-C-A | ** | ||||||
5841978-G-T | 5973937-G-T | ** | ||||||
2729844-G-A | 2861803-G-A | ** | ||||||
2745977-C-G | 2877936-C-G | ** | ||||||
2758367-C-A | 2890326-C-A | ** | ||||||
2856611-C-A | 2988570-C-A | ** | ||||||
2952352-A-C | 3084311-A-C | ** | ||||||
2979656-A-C | 3111615-A-C | ** | ||||||
2986584-G-A | 3118543-G-A | FT142802 | ** | |||||
3043737-G-T | 3175696-G-T | ** | ||||||
3045609-C-A | 3177568-C-A | ** | ||||||
3164634-C-G | 3296593-C-G | ** | ||||||
3250764-G-T | 3382723-G-T | ** | ||||||
3252482-A-T | 3384441-A-T | ** | ||||||
3271918-G-C | 3403877-G-C | ** | ||||||
3287224-A-G | 3419183-A-G | FT14359 | ** | |||||
3343029-C-A | 3474988-C-A | ** | ||||||
3360042-G-T | 3492001-G-T | ** | ||||||
3437076-A-G | 3569035-A-G | ** | ||||||
3592456-G-T | 3724415-G-T | ** | ||||||
3681393-G-T | 3813352-G-T | ** | ||||||
3910573-G-T | 4042532-G-T | ** | ||||||
4094487-G-T | 4226446-G-T | ** | ||||||
4096974-G-T | 4228933-G-T | ** | ||||||
4101263-T-A | 4233222-T-A | ** | ||||||
4226631-C-A | 4358590-C-A | ** | ||||||
4241367-G-T | 4373326-G-T | ** | ||||||
4255244-T-C | 4387203-T-C | ** | ||||||
4255287-C-A | 4387246-C-A | ** | ||||||
4297497-C-A | 4429456-C-A | ** | ||||||
4352794-C-A | 4484753-C-A | ** | ||||||
4392913-G-T | 4524872-G-T | ** | ||||||
4417627-A-C | 4549586-A-C | ** | ||||||
4553396-A-C | 4685355-A-C | ** | ||||||
4672369-C-A | 4804328-C-A | ** | ||||||
4840694-A-C | 4972653-A-C | ** | ||||||
4861860-T-C | 4993819-T-C | ** | ||||||
4920210-A-G | 5052169-A-G | ** | ||||||
4932792-C-A | 5064751-C-A | ** | ||||||
4957775-C-A | 5089734-C-A | ** | ||||||
4959976-A-G | 5091935-A-G | ** | ||||||
4996222-C-A | 5128181-C-A | ** | ||||||
5084046-G-A | 5216005-G-A | ** | ||||||
5131059-C-A | 5263018-C-A | ** | ||||||
5186739-A-C | 5318698-A-C | ** | ||||||
5188605-G-T | 5320564-G-T | ** | ||||||
5214110-T-G | 5346069-T-G | ** | ||||||
5247411-C-A | 5379370-C-A | ** | ||||||
5443998-C-A | 5575957-C-A | ** | ||||||
5465644-CAT-C | 5597603-CAT-C | ** | ||||||
5560041-A-G | 5692000-A-G | ** | ||||||
5590175-C-A | 5722134-C-A | ** | ||||||
5612646-C-A | 5744605-C-A | ** | ||||||
5620502-C-G | 5752461-C-G | ** | ||||||
5686407-G-A | 5818366-G-A | ** | ||||||
5735692-G-T | 5867651-G-T | ** | ||||||
5785402-G-A | 5917361-G-A | ** | ||||||
5852400-C-A | 5984359-C-A | ** | ||||||
5920874-G-T | 6052833-G-T | ** | ||||||
5926074-G-T | 6058033-G-T | ** | ||||||
5934551-G-T | 6066510-G-T | FT75443 | ** | |||||
5966154-C-A | 6098113-C-A | ** | ||||||
6043258-G-T | 6175217-G-T | ** | ||||||
6043307-T-A | 6175266-T-A | ** | ||||||
6058451-A-C | 6190410-A-C | ** | ||||||
6091079-G-T | 6223038-G-T | ** | ||||||
6352843-G-T | 6484802-G-T | ** | ||||||
6357921-C-A | 6489880-C-A | ** | ||||||
6671623-A-C | 6803582-A-C | ** | ||||||
6712059-C-A | 6844018-C-A | ** | ||||||
6790310-C-A | 6922269-C-A | ** | ||||||
6882444-G-T | 7014403-G-T | ** | ||||||
6916171-T-G | 7048130-T-G | ** | ||||||
6948454-C-A | 7080413-C-A | ** | ||||||
7038619-G-T | 7170578-G-T | ** | ||||||
7083037-C-A | 7214996-C-A | ** | ||||||
7095210-TA-T | 7227169-TA-T | ** | ||||||
7098662-C-A | 7230621-C-A | ** | ||||||
7100594-G-T | 7232553-G-T | ** | ||||||
7116058-C-A | 7248017-C-A | ** | ||||||
7131845-C-A | 7263804-C-A | ** | ||||||
7142554-G-T | 7274513-G-T | ** | ||||||
7160854-A-G | 7292813-A-G | ** | ||||||
7170689-C-T | 7302648-C-T | ** | ||||||
7209169-T-C | 7341128-T-C | ** | ||||||
7218229-G-T | 7350188-G-T | ** | ||||||
7231220-C-T | 7363179-C-T | ** | ||||||
7307707-G-C | 7439666-G-C | ** | ||||||
7337067-G-A | 7469026-G-A | ** | ||||||
7337121-G-A | 7469080-G-A | ** | ||||||
7425144-A-G | 7557103-A-G | ** | ||||||
7664342-A-C | 7796301-A-C | ** | ||||||
7664362-A-C | 7796321-A-C | ** | ||||||
7774119-T-C | 7906078-T-C | ** | ||||||
7885463-A-C | 8017422-A-C | ** | ||||||
7896624-G-A | 8028583-G-A | ** | ||||||
8094680-C-A | 8226639-C-A | ** | ||||||
8142784-C-A | 8274743-C-A | ** | ||||||
8153877-C-T | 8285836-C-T | ** | ||||||
8216410-T-TTTC | 8348369-T-TTTC | ** | ||||||
8692158-T-C | 8824117-T-C | ** | ||||||
8724988-A-G | 8856947-A-G | ** | ||||||
8807014-G-A | 8938973-G-A | ** | ||||||
8807579-C-A | 8939538-C-A | ** | ||||||
8816260-G-T | 8948219-G-T | ** | ||||||
8816594-C-T | 8948553-C-T | ** | ||||||
8816672-C-A | 8948631-C-A | ** | ||||||
9108084-G-T | ** | |||||||
9403070-C-A | 9565461-C-A | ** | ||||||
9499275-G-A | 9661666-G-A | ** | ||||||
10050102-C-A | 10212493-C-A | ** | ||||||
10654780-C-A | ** | |||||||
10682610-C-A | ** | |||||||
10689739-C-A | ** | |||||||
10693067-T-A | ** | |||||||
10745298-C-A | ** | |||||||
10750530-T-C | ** | |||||||
10760631-T-C | ** | |||||||
10771317-T-G | ** | |||||||
10787280-C-A | ** | |||||||
10795051-GCATTCCATTCCATTCCATTCCATTC-G | ** | |||||||
10795247-C-A | ** | |||||||
10808554-C-A | ** | |||||||
10824378-A-C | ** | |||||||
10858424-A-T | ** | |||||||
10889670-C-A | ** | |||||||
10890366-C-T | ** | |||||||
10893791-C-A | ** | |||||||
10893820-T-C | ** | |||||||
10898420-T-C | ** | |||||||
10898935-C-T | ** | |||||||
10946976-C-A | ** | |||||||
10950090-C-A | ** | |||||||
10953428-A-G | ** | |||||||
10989941-C-A | ** | |||||||
10991322-A-C | ** | |||||||
11005151-C-A | ** | |||||||
11007546-T-C | ** | |||||||
11022176-C-T | ** | |||||||
11028305-C-A | ** | |||||||
13197914-A-C | 11042238-A-C | ** | ||||||
13198017-G-T | 11042341-G-T | ** | ||||||
13248524-G-T | 11092848-G-T | ** | ||||||
13255332-C-A | 11099656-C-A | ** | ||||||
13273873-A-T | 11118197-A-T | ** | ||||||
13461068-A-T | 11305392-A-T | ** | ||||||
13475619-G-A | 11319943-G-A | ** | ||||||
13501401-G-T | 11345725-G-T | ** | ||||||
13520687-T-C | 11365011-T-C | ** | ||||||
13533724-G-C | 11378048-G-C | ** | ||||||
13597441-C-A | 11441765-C-A | ** | ||||||
13632856-T-A | 11477180-T-A | ** | ||||||
11647073-A-G | ** | |||||||
11654031-C-A | ** | |||||||
11675125-T-G | ** | |||||||
13874822-T-A | 11754116-T-A | ** | ||||||
13887511-T-G | 11766805-T-G | ** | ||||||
13908634-C-A | 11787928-C-A | ** | ||||||
13919179-A-G | 11798473-A-G | ** | ||||||
13938721-G-A | 11818015-G-A | ** | ||||||
13943194-C-T | 11822488-C-T | ** | ||||||
13973155-G-T | 11852449-G-T | ** | ||||||
13976534-A-G | 11855828-A-G | FT228823 | ** | |||||
14017437-C-A | 11896731-C-A | ** | ||||||
14038086-T-C | 11917380-T-C | ** | ||||||
14123892-G-T | 12003186-G-T | FT400231 | ** | |||||
14123930-TG-T | 12003224-TG-T | ** | ||||||
14146793-C-A | 12026087-C-A | ** | ||||||
14183177-T-G | 12062471-T-G | ** | ||||||
14239852-T-C | 12119146-T-C | ** | ||||||
14261430-T-G | 12140724-T-G | ** | ||||||
14284730-G-T | 12164024-G-T | ** | ||||||
14299941-G-C | 12179235-G-C | ** | ||||||
14355130-A-C | 12234425-A-C | ** | ||||||
14361566-A-G | 12240861-A-G | ** | ||||||
14380090-C-A | 12259386-C-A | ** | ||||||
14397484-C-A | 12276780-C-A | ** | ||||||
14397498-A-C | 12276794-A-C | ** | ||||||
14483252-G-A | 12362521-G-A | FT143755 | ** | |||||
14525701-C-T | 12413902-C-T | ** | ||||||
14527027-T-A | 12415228-T-A | ** | ||||||
14556427-C-A | 12444628-C-A | ** | ||||||
14559233-G-C | 12447434-G-C | ** | ||||||
14571008-A-C | 12459208-A-C | ** | ||||||
14608139-C-A | 12496341-C-A | ** | ||||||
14786533-C-A | 12674603-C-A | ** | ||||||
14798528-G-T | 12686599-G-T | ** | ||||||
14815457-C-A | 12703528-C-A | ** | ||||||
14910787-GC-G | 12798854-GC-G | ** | ||||||
15012455-C-A | 12900543-C-A | ** | ||||||
15103608-T-G | 12991696-T-G | ** | ||||||
15177713-T-C | 13065799-T-C | ** | ||||||
15189121-A-C | 13077207-A-C | ** | ||||||
15219005-C-T | 13107091-C-T | FT117017 | ** | |||||
15221187-C-A | 13109273-C-A | ** | ||||||
15259291-A-T | 13147375-A-T | ** | ||||||
15424248-G-T | 13312368-G-T | ** | ||||||
15429486-G-C | 13317606-G-C | ** | ||||||
15445476-G-A | 13333596-G-A | ** | ||||||
15446826-C-A | 13334946-C-A | ** | ||||||
15542108-A-G | 13430228-A-G | ** | ||||||
15654982-C-A | 13543102-C-A | ** | ||||||
15686579-C-A | 13574699-C-A | ** | ||||||
15748113-G-T | 13636233-G-T | ** | ||||||
15863131-C-A | 13751251-C-A | ** | ||||||
15943158-C-A | 13831278-C-A | ** | ||||||
16010408-C-A | 13898528-C-A | ** | ||||||
16041377-A-G | 13929497-A-G | ** | ||||||
16055856-C-A | 13943976-C-A | ** | ||||||
16085658-C-A | 13973778-C-A | ** | ||||||
16319511-A-T | 14207631-A-T | ** | ||||||
16351897-G-A | 14240017-G-A | ** | ||||||
16429826-G-T | 14317946-G-T | ** | ||||||
16503760-T-C | 14391880-T-C | ** | ||||||
16673279-A-G | 14561399-A-G | ** | ||||||
16676713-A-C | 14564833-A-C | ** | ||||||
16678683-C-A | 14566803-C-A | ** | ||||||
16786132-C-A | 14674252-C-A | ** | ||||||
17048214-C-A | 14936334-C-A | ** | ||||||
17124459-T-A | 15012579-T-A | ** | ||||||
17218386-C-A | 15106506-C-A | ** | ||||||
17265016-C-A | 15153136-C-A | ** | ||||||
17265023-C-A | 15153143-C-A | ** | ||||||
17306382-C-T | 15194502-C-T | ** | ||||||
17375728-G-T | 15263848-G-T | ** | ||||||
17433938-C-A | 15322058-C-A | ** | ||||||
17628867-C-T | 15516987-C-T | ** | ||||||
17714717-A-G | 15602837-A-G | ** | ||||||
17735465-T-G | 15623585-T-G | ** | ||||||
17770384-A-G | 15658504-A-G | ** | ||||||
17821960-G-A | 15710080-G-A | ** | ||||||
17821962-C-G | 15710082-C-G | ** | ||||||
17926533-TC-T | 15814653-TC-T | ** | ||||||
18058828-G-T | 15946948-G-T | ** | ||||||
18071562-G-A | 15959682-G-A | ** | ||||||
18101494-C-A | 15989614-C-A | ** | ||||||
18128054-G-A | 16016174-G-A | ** | ||||||
18354445-A-C | 16242565-A-C | P6_Prx | ** | |||||
18403224-C-A | 16291344-C-A | P6_Gap | ** | |||||
18653366-A-G | 16541486-A-G | ** | ||||||
18703072-A-G | 16591192-A-G | ** | ||||||
18753216-G-T | 16641336-G-T | ** | ||||||
18768488-T-A | 16656608-T-A | ** | ||||||
18856110-C-A | 16744230-C-A | ** | ||||||
18906360-G-A | 16794480-G-A | ** | ||||||
19043712-T-C | 16931832-T-C | ** | ||||||
19056178-G-A | 16944298-G-A | ** | ||||||
19059811-G-C | 16947931-G-C | ** | ||||||
19081268-GT-G | 16969388-GT-G | ** | ||||||
19088326-C-A | 16976446-C-A | ** | ||||||
19250713-A-T | 17138833-A-T | ** | ||||||
19296916-C-A | 17185036-C-A | ** | ||||||
19410152-A-T | 17298272-A-T | ** | ||||||
19418387-T-C | 17306507-T-C | ** | ||||||
19463551-A-G | 17351671-A-G | ** | ||||||
19755053-C-A | 17643173-C-A | P5_Prx | ** | |||||
19856072-A-AG | 17744192-A-AG | P5_Prx | ** | |||||
20213017-C-A | 18051131-C-A | P5_Dst | ** | |||||
20255133-T-C | 18093247-T-C | P5_Dst | ** | |||||
20634945-G-GAAAT | 18473059-G-GAAAT | P4_Prx | ** | |||||
20685097-C-A | 18523211-C-A | P4_Prx | ** | |||||
20888670-A-G | 18726784-A-G | P4_Dst | ** | |||||
21048973-A-C | 18887087-A-C | ** | ||||||
21115782-C-A | 18953896-C-A | ** | ||||||
21154500-T-C | 18992614-T-C | ** | ||||||
21221206-T-G | 19059320-T-G | ** | ||||||
21382602-G-C | 19220716-G-C | ** | ||||||
21457739-A-C | 19295853-A-C | ** | ||||||
21678265-C-A | 19516379-C-A | ** | ||||||
21713431-T-C | 19551545-T-C | ** | ||||||
22040917-T-G | 19879031-T-G | ** | ||||||
22052443-C-A | 19890557-C-A | ** | ||||||
22076162-T-G | 19914276-T-G | ** | ||||||
22090981-G-T | 19929095-G-T | ** | ||||||
22170186-C-T | 20008300-C-T | ** | ||||||
22215260-G-T | 20053374-G-T | ** | ||||||
22461485-C-T | 20299599-C-T | DYZ19 | ** | |||||
23062773-G-T | 20900887-G-T | ** | ||||||
23082074-C-A | 20920188-C-A | ** | ||||||
23094842-T-C | 20932956-T-C | ** | ||||||
23137246-G-C | 20975360-G-C | ** | ||||||
23209997-C-T | 21048111-C-T | ** | ||||||
23276913-C-A | 21115027-C-A | ** | ||||||
23276917-A-G | 21115031-A-G | FTA51524 | ** | |||||
23442614-G-A | 21280728-G-A | ** | ||||||
23786334-C-A | 21624448-C-A | ** | ||||||
21752387-G-T | ** | |||||||
24244569-G-T | 22098422-G-T | P3_b1 | ** | |||||
24446950-G-T | 22300803-G-T | ** | ||||||
24458584-G-A | 22312437-G-A | ** | ||||||
25849173-C-T | 23703026-C-T | P1_Y1 | ** | |||||
25990663-T-C | 23844516-T-C | P1_Y1 | ** | |||||
27801225-G-GAA | 25655078-G-GAA | P1_Y2 | 13×A | ** | ||||
27801255-G-A | 25655108-G-A | P1_Y2 | ** | |||||
28469374-C-T | 26323227-C-T | ** | ||||||
28484432-C-A | 26338285-C-A | ** | ||||||
28498206-C-A | 26352059-C-A | ** | ||||||
28500179-C-A | 26354032-C-A | ** | ||||||
28542294-T-A | 26396147-T-A | ** | ||||||
28586750-C-A | 26440603-C-A | ** | ||||||
28600235-G-T | 26454088-G-T | ** | ||||||
28608523-A-T | 26462376-A-T | ** | ||||||
28657023-C-A | 26510876-C-A | ** | ||||||
56685615-G-T | ** | |||||||
56835791-C-A | ** | |||||||
56839880-C-T | ** | |||||||
56847126-G-A | ** | |||||||
56880912-C-A | ** | |||||||
56881326-A-T | ** | |||||||
9392-C-A | ** | |||||||
16178-A-T | ** | |||||||
13448816-C-T | 11293140-C-T | *** | ||||||
27810184-CAAAG-C,CAAAGAAAG | 25664037-CAAAG-C,CAAAGAAAG | P1_Y2 | 21×AAAG | *** | ||||
13450104-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCATTTCATTCCAT | 11294428-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCATTTCATTCCAT | *** | ||||||
10911821-C-A | *** | |||||||
21224779-ATTT-A,AT | 19062893-ATTT-A,AT | 19×T | *** | |||||
10755398-GTTTCA-G,GTTCCA | *** | |||||||
56858497-G-A | *** | |||||||
10755448-ATTA-A,ATTT | *** | |||||||
10755452-CTG-C,CTT | *** | |||||||
10974005-T-TCAGTA | *** | |||||||
10659957-C-A | *** | |||||||
6444871-T-C | 6576830-T-C | FGC80942 | *** | |||||
21262532-C-A | 19100646-C-A | *** | ||||||
15270877-TAA-T,TA | 13158966-TAA-T,TA | 13×A | *** | |||||
8431228-CTTTTTT-C | 8563187-CTTTTTT-C | 17×T | *** | |||||
10760345-CACTGT-C,CACTGC | *** | |||||||
16905802-T-A | 14793922-T-A | *** | ||||||
19417345-C-A | 17305465-C-A | *** | ||||||
19436672-AAAAGAAAGAAAGAAAGAAAG-A,AAAAG | 17324792-AAAAGAAAGAAAGAAAGAAAG-A,AAAAG | 17×AAAG | *** | |||||
17942617-TAAA-T | 15830737-TAAA-T | 14×A | *** | |||||
3602925-G-A | 3734884-G-A | *** | ||||||
6786745-C-A | 6918704-C-A | *** | ||||||
7868018-G-T | 7999977-G-T | *** | ||||||
10987834-C-CACTCTATTCGATTAA | *** | |||||||
11003708-C-A | *** | |||||||
17631027-G-T | 15519147-G-T | *** | ||||||
21691757-C-A | 19529871-C-A | *** | ||||||
22099633-T-TTTATTATTA | 19937747-T-TTTATTATTA | 16×TTA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.