Madden
BigY2: 747309MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 747309 |
|---|---|---|---|---|---|---|---|
| hg19:Y:6268842-A-G hg38:Y:6400801-A-G | IR3_Dst | A* | |||||
| hg19:Y:19913090-G-C hg38:Y:17801210-G-C | P5_Prx | A* | |||||
| hg19:Y:20791801-T-C hg38:Y:18629915-T-C | P4_Prx | A* | |||||
| hg19:Y:22291031-C-G hg38:Y:20129145-C-G | DYZ19 | A* | |||||
| hg19:Y:24266806-C-T hg38:Y:22120659-C-T | P3_b1 | A* | |||||
| hg19:Y:8554977-A-G hg38:Y:8686936-A-G | BY73979 | Y | Y | + | |||
| hg19:Y:8878166-A-T hg38:Y:9010125-A-T | BY76563 | Y | + | ||||
| hg19:Y:10021818-A-C hg38:Y:10184209-A-C | BY83079 | Y | + | ||||
| hg19:Y:13707738-G-C hg38:Y:11552062-G-C | FT449296 | DYZ17 | + | ||||
| hg19:Y:15813518-C-A hg38:Y:13701638-C-A | BY104282 | Y | Y | + | |||
| hg19:Y:18981421-GA-G hg38:Y:16869541-GA-G | 9×A | + | |||||
| hg19:Y:22444398-G-T hg38:Y:20282512-G-T | BY163479 | DYZ19 | + | ||||
| hg19:Y:22464996-G-C hg38:Y:20303110-G-C | BY4632 | DYZ19 | + | ||||
| hg19:Y:22711376-CA-C hg38:Y:20549490-CA-C | + | ||||||
| hg19:Y:23164042-C-T hg38:Y:21002156-C-T | Y | + | |||||
| hg19:Y:24502816-T-C hg38:Y:22356669-T-C | BY150391 | + | |||||
| hg19:Y:22254995-T-A hg38:Y:20093109-T-A | DYZ19 | * | |||||
| hg19:Y:22317503-G-C hg38:Y:20155617-G-C | BY217286 | DYZ19 | * | ||||
| hg19:Y:22317504-G-T hg38:Y:20155618-G-T | DYZ19 | * | |||||
| hg19:Y:14286300-G-A hg38:Y:12165594-G-A | BY94572 | ** | |||||
| hg19:Y:8124944-GAGAT-G hg38:Y:8256903-GAGAT-G | ** | ||||||
| hg19:Y:13273729-G-A hg38:Y:11118053-G-A | FTA37563 | ** | |||||
| hg19:Y:13480564-AG-A hg38:Y:11324888-AG-A | ** | ||||||
| hg19:Y:15412847-C-T hg38:Y:13300967-C-T | CTS4127 M2187 | ** | |||||
| hg19:Y:15940109-T-C hg38:Y:13828229-T-C | Z11423 | ** | |||||
| hg19:Y:22561485-C-A hg38:Y:20399599-C-A | Z2430 | ** | |||||
| hg19:Y:23792286-GTAT-G hg38:Y:21630400-GTAT-G | 5×TAT | ** | |||||
| hg19:Y:13860019-A-G hg38:Y:11739313-A-G | DYZ17 | ** | |||||
| hg19:Y:2860477-G-T hg38:Y:2992436-G-T | ** | ||||||
| hg19:Y:13859411-A-G hg38:Y:11738705-A-G | DYZ17 | ** | |||||
| hg19:Y:13859415-G-A hg38:Y:11738709-G-A | DYZ17 | ** | |||||
| hg19:Y:13859418-T-TA hg38:Y:11738712-T-TA | DYZ17 | ** | |||||
| hg19:Y:13859419-G-GAAAA hg38:Y:11738713-G-GAAAA | DYZ17 | ** | |||||
| hg19:Y:13859423-T-C hg38:Y:11738717-T-C | DYZ17 | ** | |||||
| hg38:Y:10815165-T-A | ** | ||||||
| hg19:Y:20522399-TAC-T hg38:Y:18360513-TAC-T | P5_Dst | ** | |||||
| hg19:Y:21992986-AG-A hg38:Y:19831100-AG-A | ** | ||||||
| hg38:Y:10688252-C-T | ** | ||||||
| hg19:Y:9944152-G-T hg38:Y:10106543-G-T | ** | ||||||
| hg38:Y:10925661-T-C | ** | ||||||
| hg19:Y:6822649-C-A hg38:Y:6954608-C-A | ** | ||||||
| hg38:Y:11003409-T-A | ** | ||||||
| hg38:Y:10763227-C-T | ** | ||||||
| hg38:Y:10763233-T-C | ** | ||||||
| hg38:Y:10760325-C-A | ** | ||||||
| hg19:Y:9945466-G-T hg38:Y:10107857-G-T | ** | ||||||
| hg19:Y:15653256-C-A hg38:Y:13541376-C-A | ** | ||||||
| hg38:Y:10987341-T-C | ** | ||||||
| hg38:Y:10785296-T-C | ** | ||||||
| hg19:Y:13472000-T-C hg38:Y:11316324-T-C | ** | ||||||
| hg19:Y:23262645-C-A hg38:Y:21100759-C-A | ** | ||||||
| hg38:Y:10912866-A-G | ** | ||||||
| hg38:Y:10925652-T-A | ** | ||||||
| hg19:Y:5785784-C-A hg38:Y:5917743-C-A | ** | ||||||
| hg19:Y:8013496-C-A hg38:Y:8145455-C-A | ** | ||||||
| hg19:Y:2986160-C-A hg38:Y:3118119-C-A | ** | ||||||
| hg38:Y:10925646-T-C | ** | ||||||
| hg38:Y:10688197-C-T | ** | ||||||
| hg38:Y:10672441-C-T | ** | ||||||
| hg38:Y:10672425-C-A | ** | ||||||
| hg38:Y:10672439-C-G | ** | ||||||
| hg38:Y:10672445-T-A | ** | ||||||
| hg38:Y:10672446-C-T | ** | ||||||
| hg38:Y:10672451-C-T | ** | ||||||
| hg38:Y:10672454-T-G | ** | ||||||
| hg38:Y:10672461-C-T | FT428791 | ** | |||||
| hg38:Y:10672464-G-C | ** | ||||||
| hg38:Y:10925716-T-C | ** | ||||||
| hg38:Y:10925711-T-A | ** | ||||||
| hg38:Y:10893930-T-C | ** | ||||||
| hg38:Y:10893932-T-A | ** | ||||||
| hg19:Y:22340085-C-A hg38:Y:20178199-C-A | DYZ19 | ** | |||||
| hg19:Y:13493532-C-A hg38:Y:11337856-C-A | ** | ||||||
| hg38:Y:10925679-C-T | ** | ||||||
| hg19:Y:15412828-C-A hg38:Y:13300948-C-A | ** | ||||||
| hg19:Y:14688807-C-A hg38:Y:12576873-C-A | ** | ||||||
| hg19:Y:13460279-T-A hg38:Y:11304603-T-A | ** | ||||||
| hg19:Y:15780201-C-A hg38:Y:13668321-C-A | ** | ||||||
| hg38:Y:10813578-A-G | ** | ||||||
| hg19:Y:22164543-G-T hg38:Y:20002657-G-T | ** | ||||||
| hg19:Y:18491641-TA-T hg38:Y:16379761-TA-T | P6_Dst | ** | |||||
| hg19:Y:21308942-C-A hg38:Y:19147056-C-A | ** | ||||||
| hg19:Y:20788448-G-A hg38:Y:18626562-G-A | P4_Prx | ** | |||||
| hg19:Y:21608427-C-A hg38:Y:19446541-C-A | ** | ||||||
| hg38:Y:10925634-C-G | ** | ||||||
| hg38:Y:10815111-T-C | ** | ||||||
| hg19:Y:21972251-C-A hg38:Y:19810365-C-A | ** | ||||||
| hg38:Y:56756830-A-C | ** | ||||||
| hg19:Y:8399143-C-A hg38:Y:8531102-C-A | ** | ||||||
| hg19:Y:7200113-T-C hg38:Y:7332072-T-C | ** | ||||||
| hg38:Y:10648117-C-T | ** | ||||||
| hg38:Y:10747052-A-AT | ** | ||||||
| hg19:Y:8216571-A-AT hg38:Y:8348530-A-AT | 9×T | ** | |||||
| hg19:Y:17676307-A-G hg38:Y:15564427-A-G | ** | ||||||
| hg38:Y:56850828-G-T | ** | ||||||
| hg38:Y:10925669-C-A | ** | ||||||
| hg38:Y:10925676-T-A | ** | ||||||
| hg19:Y:13709496-C-G hg38:Y:11553820-C-G | DYZ17 | ** | |||||
| hg19:Y:7237325-C-A hg38:Y:7369284-C-A | ** | ||||||
| hg19:Y:3061136-C-A hg38:Y:3193095-C-A | ** | ||||||
| hg38:Y:11019655-G-T | ** | ||||||
| hg38:Y:10753206-A-C | ** | ||||||
| hg38:Y:10753220-C-CACTTTGATTG | ** | ||||||
| hg38:Y:10753227-T-A | ** | ||||||
| hg38:Y:10753254-C-T | ** | ||||||
| hg19:Y:28655583-C-T hg38:Y:26509436-C-T | ** | ||||||
| hg19:Y:7081089-C-A hg38:Y:7213048-C-A | ** | ||||||
| hg19:Y:3559794-C-A hg38:Y:3691753-C-A | ** | ||||||
| hg19:Y:23720025-A-C hg38:Y:21558139-A-C | FT132128 | ** | |||||
| hg19:Y:16488091-C-A hg38:Y:14376211-C-A | ** | ||||||
| hg19:Y:5228377-T-C hg38:Y:5360336-T-C | FT17316 | ** | |||||
| hg19:Y:21422237-A-C hg38:Y:19260351-A-C | ** | ||||||
| hg19:Y:8130456-G-T hg38:Y:8262415-G-T | ** | ||||||
| hg19:Y:22842427-C-A hg38:Y:20680541-C-A | ** | ||||||
| hg19:Y:14349995-C-A hg38:Y:12229290-C-A | ** | ||||||
| hg19:Y:14716679-G-T hg38:Y:12604747-G-T | ** | ||||||
| hg38:Y:10893933-C-T | ** | ||||||
| hg19:Y:18177208-C-A hg38:Y:16065328-C-A | ** | ||||||
| hg19:Y:15734239-C-A hg38:Y:13622359-C-A | ** | ||||||
| hg38:Y:56756845-A-AATGGC | ** | ||||||
| hg19:Y:4352687-C-A hg38:Y:4484646-C-A | ** | ||||||
| hg19:Y:15747533-C-A hg38:Y:13635653-C-A | ** | ||||||
| hg38:Y:10959865-C-T | ** | ||||||
| hg38:Y:10959866-A-C | ** | ||||||
| hg38:Y:10959867-G-C | ** | ||||||
| hg38:Y:10959877-TTCTAG-T | ** | ||||||
| hg38:Y:10959888-T-C | ** | ||||||
| hg38:Y:10959894-C-A | ** | ||||||
| hg38:Y:10959899-C-A | ** | ||||||
| hg38:Y:10959901-A-T | ** | ||||||
| hg38:Y:10959914-C-G | ** | ||||||
| hg38:Y:10959915-T-C | FT438273 | ** | |||||
| hg38:Y:10959919-C-G | ** | ||||||
| hg38:Y:10959932-TC-T | ** | ||||||
| hg19:Y:24364034-C-A hg38:Y:22217887-C-A | ** | ||||||
| hg19:Y:2909140-C-A hg38:Y:3041099-C-A | ** | ||||||
| hg19:Y:22559149-G-T hg38:Y:20397263-G-T | ** | ||||||
| hg38:Y:10986414-C-A | ** | ||||||
| hg19:Y:9618320-G-T hg38:Y:9780711-G-T | IR3_Prx | ** | |||||
| hg19:Y:13988947-A-T hg38:Y:11868241-A-T | FTA18219 | ** | |||||
| hg19:Y:4997479-AACAC-A hg38:Y:5129438-AACAC-A | 11×AC | ** | |||||
| hg19:Y:17580948-AT-A hg38:Y:15469068-AT-A | ** | ||||||
| hg19:Y:13460261-GA-T hg38:Y:11304585-GA-T | ** | ||||||
| hg19:Y:16988771-C-A hg38:Y:14876891-C-A | ** | ||||||
| hg38:Y:10950656-C-A | ** | ||||||
| hg38:Y:10815118-C-CCACTT | ** | ||||||
| hg38:Y:10815128-C-T | ** | ||||||
| hg38:Y:10815135-A-C | ** | ||||||
| hg38:Y:10815150-A-G | ** | ||||||
| hg19:Y:4780423-C-A hg38:Y:4912382-C-A | ** | ||||||
| hg19:Y:13223278-A-G hg38:Y:11067602-A-G | ** | ||||||
| hg19:Y:18723906-TC-A hg38:Y:16612026-TC-A | ** | ||||||
| hg19:Y:15940118-T-C hg38:Y:13828238-T-C | ** | ||||||
| hg19:Y:5221113-G-A hg38:Y:5353072-G-A | ** | ||||||
| hg19:Y:16613159-C-A hg38:Y:14501279-C-A | ** | ||||||
| hg19:Y:8816542-C-A hg38:Y:8948501-C-A | ** | ||||||
| hg19:Y:18244008-C-A hg38:Y:16132128-C-A | ** | ||||||
| hg19:Y:7243918-C-A hg38:Y:7375877-C-A | ** | ||||||
| hg38:Y:10995493-C-A | ** | ||||||
| hg38:Y:10648081-C-G | ** | ||||||
| hg38:Y:10648093-A-AC | ** | ||||||
| hg38:Y:10648095-TC-T | ** | ||||||
| hg38:Y:10671538-C-A | ** | ||||||
| hg19:Y:23801541-A-C hg38:Y:21639655-A-C | ** | ||||||
| hg19:Y:17676310-A-G hg38:Y:15564430-A-G | FT68353 | ** | |||||
| hg38:Y:10944299-C-A | ** | ||||||
| hg19:Y:23834821-T-G hg38:Y:21672935-T-G | ** | ||||||
| hg19:Y:20989098-C-A hg38:Y:18827212-C-A | P4_Dst | ** | |||||
| hg19:Y:15974985-C-A hg38:Y:13863105-C-A | ** | ||||||
| hg19:Y:14746063-A-G hg38:Y:12634132-A-G | ** | ||||||
| hg19:Y:23059473-C-A hg38:Y:20897587-C-A | ** | ||||||
| hg19:Y:19187421-C-A hg38:Y:17075541-C-A | ** | ||||||
| hg19:Y:7043652-G-T hg38:Y:7175611-G-T | ** | ||||||
| hg19:Y:2695550-C-A hg38:Y:2827509-C-A | ** | ||||||
| hg19:Y:2707103-C-T hg38:Y:2839062-C-T | ** | ||||||
| hg19:Y:2844281-G-T hg38:Y:2976240-G-T | ** | ||||||
| hg19:Y:3923010-G-T hg38:Y:4054969-G-T | ** | ||||||
| hg19:Y:3987265-C-A hg38:Y:4119224-C-A | ** | ||||||
| hg19:Y:4038916-CACCCA-C hg38:Y:4170875-CACCCA-C | ** | ||||||
| hg19:Y:4138863-C-A hg38:Y:4270822-C-A | ** | ||||||
| hg19:Y:4244854-C-A hg38:Y:4376813-C-A | ** | ||||||
| hg19:Y:4427168-G-T hg38:Y:4559127-G-T | ** | ||||||
| hg19:Y:4431347-G-T hg38:Y:4563306-G-T | ** | ||||||
| hg19:Y:4840251-C-A hg38:Y:4972210-C-A | ** | ||||||
| hg19:Y:4995745-T-C hg38:Y:5127704-T-C | ** | ||||||
| hg19:Y:5201183-G-T hg38:Y:5333142-G-T | ** | ||||||
| hg19:Y:5221122-C-T hg38:Y:5353081-C-T | ** | ||||||
| hg19:Y:5289158-G-T hg38:Y:5421117-G-T | ** | ||||||
| hg19:Y:5364847-C-A hg38:Y:5496806-C-A | ** | ||||||
| hg19:Y:5906620-TGCTTG-T hg38:Y:6038579-TGCTTG-T | ** | ||||||
| hg19:Y:5948938-A-T hg38:Y:6080897-A-T | ** | ||||||
| hg19:Y:6028824-C-A hg38:Y:6160783-C-A | ** | ||||||
| hg19:Y:6102973-A-G hg38:Y:6234932-A-G | ** | ||||||
| hg19:Y:6153261-A-T hg38:Y:6285220-A-T | IR3_Dst | ** | |||||
| hg19:Y:6191629-G-A hg38:Y:6323588-G-A | BY59455 | IR3_Dst | ** | ||||
| hg19:Y:6272687-A-C hg38:Y:6404646-A-C | IR3_Dst | ** | |||||
| hg19:Y:6458004-C-A hg38:Y:6589963-C-A | ** | ||||||
| hg19:Y:6645566-C-A hg38:Y:6777525-C-A | ** | ||||||
| hg19:Y:6666439-T-C hg38:Y:6798398-T-C | ** | ||||||
| hg19:Y:6773704-C-A hg38:Y:6905663-C-A | ** | ||||||
| hg19:Y:6787477-C-A hg38:Y:6919436-C-A | ** | ||||||
| hg19:Y:6875085-A-T hg38:Y:7007044-A-T | ** | ||||||
| hg19:Y:6880126-A-T hg38:Y:7012085-A-T | ** | ||||||
| hg19:Y:7046606-C-A hg38:Y:7178565-C-A | ** | ||||||
| hg19:Y:7086429-C-A hg38:Y:7218388-C-A | ** | ||||||
| hg19:Y:7200100-G-T hg38:Y:7332059-G-T | ** | ||||||
| hg19:Y:7200103-A-G hg38:Y:7332062-A-G | ** | ||||||
| hg19:Y:7200114-G-A hg38:Y:7332073-G-A | ** | ||||||
| hg19:Y:7222620-C-A hg38:Y:7354579-C-A | ** | ||||||
| hg19:Y:7315754-A-G hg38:Y:7447713-A-G | ** | ||||||
| hg19:Y:7409356-C-T hg38:Y:7541315-C-T | ** | ||||||
| hg19:Y:7636527-C-A hg38:Y:7768486-C-A | ** | ||||||
| hg19:Y:8219855-A-T hg38:Y:8351814-A-T | ** | ||||||
| hg19:Y:8751696-G-A hg38:Y:8883655-G-A | ** | ||||||
| hg19:Y:8776275-G-A hg38:Y:8908234-G-A | ** | ||||||
| hg19:Y:8827390-A-G hg38:Y:8959349-A-G | ** | ||||||
| hg19:Y:9014216-G-T hg38:Y:9176607-G-T | ** | ||||||
| hg19:Y:9077073-CTTG-C hg38:Y:9239464-CTTG-C | ** | ||||||
| hg19:Y:9507997-T-G hg38:Y:9670388-T-G | ** | ||||||
| hg19:Y:9513020-G-T hg38:Y:9675411-G-T | ** | ||||||
| hg19:Y:9827900-C-A hg38:Y:9990291-C-A | ** | ||||||
| hg19:Y:9856106-AAAAATAAATAAATAAAT-A hg38:Y:10018497-AAAAATAAATAAATAAAT-A | ** | ||||||
| hg19:Y:9936246-C-T hg38:Y:10098637-C-T | ** | ||||||
| hg38:Y:10648077-C-CGTTAA | ** | ||||||
| hg38:Y:10669544-C-A | ** | ||||||
| hg38:Y:10691024-CTTCCATTCCATTCCATTCCATTCCATTCCA-C | ** | ||||||
| hg38:Y:10745586-C-A | ** | ||||||
| hg38:Y:10747101-A-C | ** | ||||||
| hg38:Y:10750060-C-T | ** | ||||||
| hg38:Y:10794832-A-C | ** | ||||||
| hg38:Y:10804784-C-A | ** | ||||||
| hg38:Y:10815109-C-T | ** | ||||||
| hg38:Y:10837106-G-A | ** | ||||||
| hg38:Y:10843765-C-A | ** | ||||||
| hg38:Y:10867177-C-G | ** | ||||||
| hg38:Y:10869364-C-A | ** | ||||||
| hg38:Y:10874338-C-A | ** | ||||||
| hg38:Y:10898298-C-A | ** | ||||||
| hg38:Y:10900565-C-A | ** | ||||||
| hg38:Y:11000108-G-T | ** | ||||||
| hg38:Y:11007002-A-C | ** | ||||||
| hg38:Y:11022612-C-A | ** | ||||||
| hg19:Y:13198646-C-A hg38:Y:11042970-C-A | ** | ||||||
| hg19:Y:13267846-G-A hg38:Y:11112170-G-A | ** | ||||||
| hg19:Y:13323911-C-T hg38:Y:11168235-C-T | FT442870 | ** | |||||
| hg19:Y:13454758-A-T hg38:Y:11299082-A-T | ** | ||||||
| hg19:Y:13460245-C-G hg38:Y:11304569-C-G | ** | ||||||
| hg19:Y:13462283-C-G hg38:Y:11306607-C-G | ** | ||||||
| hg19:Y:13462326-C-CCT hg38:Y:11306650-C-CCT | ** | ||||||
| hg19:Y:13480545-G-T hg38:Y:11324869-G-T | ** | ||||||
| hg19:Y:13570176-G-T hg38:Y:11414500-G-T | ** | ||||||
| hg19:Y:13596445-G-T hg38:Y:11440769-G-T | ** | ||||||
| hg19:Y:13630844-C-A hg38:Y:11475168-C-A | ** | ||||||
| hg38:Y:11650820-TTGGAATGG-T | DYZ17 | ** | |||||
| hg38:Y:11653970-T-A | DYZ17 | ** | |||||
| hg38:Y:11666459-A-T | DYZ17 | ** | |||||
| hg19:Y:13855800-G-T hg38:Y:11735094-G-T | DYZ17 | ** | |||||
| hg19:Y:13866174-G-A hg38:Y:11745468-G-A | DYZ17 | ** | |||||
| hg19:Y:14043800-C-A hg38:Y:11923094-C-A | ** | ||||||
| hg19:Y:14103978-C-A hg38:Y:11983272-C-A | ** | ||||||
| hg19:Y:14136858-C-A hg38:Y:12016152-C-A | ** | ||||||
| hg19:Y:14188161-C-A hg38:Y:12067455-C-A | ** | ||||||
| hg38:Y:12371156-A-G | ** | ||||||
| hg38:Y:12378565-G-T | ** | ||||||
| hg19:Y:14596062-C-A hg38:Y:12484262-C-A | ** | ||||||
| hg19:Y:14604714-C-A hg38:Y:12492916-C-A | FT198695 | ** | |||||
| hg19:Y:14741508-C-A hg38:Y:12629576-C-A | ** | ||||||
| hg19:Y:14746062-C-T hg38:Y:12634131-C-T | ** | ||||||
| hg19:Y:14746738-A-G hg38:Y:12634807-A-G | ** | ||||||
| hg19:Y:14875823-G-A hg38:Y:12763893-G-A | ** | ||||||
| hg19:Y:14908259-G-A hg38:Y:12796326-G-A | ** | ||||||
| hg19:Y:14931629-C-A hg38:Y:12819694-C-A | ** | ||||||
| hg19:Y:14934887-A-T hg38:Y:12822952-A-T | ** | ||||||
| hg19:Y:14934894-G-T hg38:Y:12822959-G-T | ** | ||||||
| hg19:Y:14950514-C-A hg38:Y:12838588-C-A | ** | ||||||
| hg19:Y:14996930-T-C hg38:Y:12885015-T-C | FT89310 | ** | |||||
| hg19:Y:15137873-T-G hg38:Y:13025960-T-G | ** | ||||||
| hg19:Y:15192671-T-C hg38:Y:13080757-T-C | ** | ||||||
| hg19:Y:15379824-C-A hg38:Y:13267944-C-A | ** | ||||||
| hg19:Y:15478948-T-A hg38:Y:13367068-T-A | ** | ||||||
| hg19:Y:15497583-A-T hg38:Y:13385703-A-T | ** | ||||||
| hg19:Y:15725784-T-C hg38:Y:13613904-T-C | ** | ||||||
| hg19:Y:15859343-C-A hg38:Y:13747463-C-A | ** | ||||||
| hg19:Y:15909602-A-G hg38:Y:13797722-A-G | ** | ||||||
| hg19:Y:15930883-C-A hg38:Y:13819003-C-A | ** | ||||||
| hg19:Y:15932231-G-T hg38:Y:13820351-G-T | ** | ||||||
| hg19:Y:15940090-G-C hg38:Y:13828210-G-C | ** | ||||||
| hg19:Y:15940101-A-T hg38:Y:13828221-A-T | ** | ||||||
| hg19:Y:15940111-T-G hg38:Y:13828231-T-G | ** | ||||||
| hg19:Y:15952855-A-G hg38:Y:13840975-A-G | ** | ||||||
| hg19:Y:16007364-T-C hg38:Y:13895484-T-C | ** | ||||||
| hg19:Y:16243118-C-T hg38:Y:14131238-C-T | ** | ||||||
| hg19:Y:16345132-C-A hg38:Y:14233252-C-A | ** | ||||||
| hg19:Y:16360763-G-C hg38:Y:14248883-G-C | BY207215 | ** | |||||
| hg19:Y:16503513-C-A hg38:Y:14391633-C-A | ** | ||||||
| hg19:Y:16738263-TG-T hg38:Y:14626383-TG-T | ** | ||||||
| hg19:Y:16778062-T-C hg38:Y:14666182-T-C | ** | ||||||
| hg19:Y:16855361-G-T hg38:Y:14743481-G-T | ** | ||||||
| hg19:Y:17135827-G-T hg38:Y:15023947-G-T | ** | ||||||
| hg19:Y:17191633-C-A hg38:Y:15079753-C-A | ** | ||||||
| hg19:Y:17207464-C-A hg38:Y:15095584-C-A | ** | ||||||
| hg19:Y:17279210-C-A hg38:Y:15167330-C-A | ** | ||||||
| hg19:Y:17347445-C-A hg38:Y:15235565-C-A | FTA36565 | ** | |||||
| hg19:Y:17559699-C-A hg38:Y:15447819-C-A | ** | ||||||
| hg19:Y:17683599-C-A hg38:Y:15571719-C-A | ** | ||||||
| hg19:Y:17715544-C-A hg38:Y:15603664-C-A | ** | ||||||
| hg19:Y:17749414-G-T hg38:Y:15637534-G-T | ** | ||||||
| hg19:Y:17811156-C-T hg38:Y:15699276-C-T | ** | ||||||
| hg19:Y:17811157-A-G hg38:Y:15699277-A-G | ** | ||||||
| hg19:Y:18020731-C-A hg38:Y:15908851-C-A | ** | ||||||
| hg19:Y:18704217-C-A hg38:Y:16592337-C-A | ** | ||||||
| hg19:Y:18801791-T-C hg38:Y:16689911-T-C | ** | ||||||
| hg19:Y:18801792-G-A hg38:Y:16689912-G-A | ** | ||||||
| hg19:Y:18801799-A-G hg38:Y:16689919-A-G | ** | ||||||
| hg19:Y:18801800-A-C hg38:Y:16689920-A-C | ** | ||||||
| hg19:Y:18801801-G-A hg38:Y:16689921-G-A | ** | ||||||
| hg19:Y:18801813-A-G hg38:Y:16689933-A-G | ** | ||||||
| hg19:Y:18801814-T-C hg38:Y:16689934-T-C | ** | ||||||
| hg19:Y:18930711-C-A hg38:Y:16818831-C-A | ** | ||||||
| hg19:Y:19004807-C-A hg38:Y:16892927-C-A | ** | ||||||
| hg19:Y:19104696-A-G hg38:Y:16992816-A-G | ** | ||||||
| hg19:Y:19135425-C-A hg38:Y:17023545-C-A | ** | ||||||
| hg19:Y:19200869-A-G hg38:Y:17088989-A-G | ** | ||||||
| hg19:Y:19225322-G-A hg38:Y:17113442-G-A | ** | ||||||
| hg19:Y:19254465-G-T hg38:Y:17142585-G-T | ** | ||||||
| hg19:Y:19263526-A-C hg38:Y:17151646-A-C | ** | ||||||
| hg19:Y:19391133-C-A hg38:Y:17279253-C-A | ** | ||||||
| hg19:Y:19558017-CA-C hg38:Y:17446137-CA-C | ** | ||||||
| hg19:Y:19701409-G-T hg38:Y:17589529-G-T | P5_Prx | ** | |||||
| hg19:Y:20264638-G-T hg38:Y:18102752-G-T | P5_Dst | ** | |||||
| hg19:Y:21076144-C-A hg38:Y:18914258-C-A | ** | ||||||
| hg19:Y:21092664-G-A hg38:Y:18930778-G-A | BY130369 | ** | |||||
| hg19:Y:21137668-C-A hg38:Y:18975782-C-A | ** | ||||||
| hg19:Y:21167369-C-A hg38:Y:19005483-C-A | ** | ||||||
| hg19:Y:21169030-G-A hg38:Y:19007144-G-A | ** | ||||||
| hg19:Y:21212785-A-C hg38:Y:19050899-A-C | ** | ||||||
| hg19:Y:21247703-C-A hg38:Y:19085817-C-A | ** | ||||||
| hg19:Y:21703002-A-C hg38:Y:19541116-A-C | FT213467 | ** | |||||
| hg19:Y:21751499-G-T hg38:Y:19589613-G-T | ** | ||||||
| hg19:Y:21834271-A-C hg38:Y:19672385-A-C | ** | ||||||
| hg19:Y:21834272-C-T hg38:Y:19672386-C-T | ** | ||||||
| hg19:Y:21834274-C-T hg38:Y:19672388-C-T | BY182117 | ** | |||||
| hg19:Y:21834282-T-A hg38:Y:19672396-T-A | ** | ||||||
| hg19:Y:21834283-T-G hg38:Y:19672397-T-G | ** | ||||||
| hg19:Y:21975207-A-G hg38:Y:19813321-A-G | ** | ||||||
| hg19:Y:21976238-C-A hg38:Y:19814352-C-A | ** | ||||||
| hg19:Y:21984995-A-G hg38:Y:19823109-A-G | ** | ||||||
| hg19:Y:22023802-C-A hg38:Y:19861916-C-A | ** | ||||||
| hg19:Y:22052307-C-A hg38:Y:19890421-C-A | ** | ||||||
| hg19:Y:22070466-TA-T hg38:Y:19908580-TA-T | ** | ||||||
| hg19:Y:22166340-C-A hg38:Y:20004454-C-A | ** | ||||||
| hg19:Y:22177418-C-A hg38:Y:20015532-C-A | ** | ||||||
| hg19:Y:22199982-A-G hg38:Y:20038096-A-G | BY208456 | ** | |||||
| hg19:Y:22319292-CC-T hg38:Y:20157406-CC-T | DYZ19 | ** | |||||
| hg19:Y:22335154-G-A hg38:Y:20173268-G-A | DYZ19 | ** | |||||
| hg19:Y:22611354-G-T hg38:Y:20449468-G-T | ** | ||||||
| hg19:Y:22646468-C-G hg38:Y:20484582-C-G | ** | ||||||
| hg19:Y:22741095-G-T hg38:Y:20579209-G-T | ** | ||||||
| hg19:Y:22857835-C-A hg38:Y:20695949-C-A | ** | ||||||
| hg19:Y:22881485-T-G hg38:Y:20719599-T-G | ** | ||||||
| hg19:Y:23069085-C-A hg38:Y:20907199-C-A | ** | ||||||
| hg19:Y:23243134-G-A hg38:Y:21081248-G-A | ** | ||||||
| hg19:Y:23425203-C-A hg38:Y:21263317-C-A | ** | ||||||
| hg19:Y:23468670-G-T hg38:Y:21306784-G-T | ** | ||||||
| hg19:Y:23573824-A-G hg38:Y:21411938-A-G | ** | ||||||
| hg19:Y:23590935-G-A hg38:Y:21429049-G-A | ** | ||||||
| hg19:Y:23769619-C-A hg38:Y:21607733-C-A | ** | ||||||
| hg19:Y:24052421-G-T hg38:Y:21906274-G-T | P3_b1 | ** | |||||
| hg19:Y:24514252-C-A hg38:Y:22368105-C-A | ** | ||||||
| hg19:Y:25522009-C-A hg38:Y:23375862-C-A | P1_gr1 | ** | |||||
| hg19:Y:26060206-AAG-A hg38:Y:23914059-AAG-A | P1_Y1 | ** | |||||
| hg19:Y:27714388-A-T hg38:Y:25568241-A-T | P1_Y2 | ** | |||||
| hg19:Y:27714391-T-C hg38:Y:25568244-T-C | P1_Y2 | ** | |||||
| hg19:Y:28589549-T-C hg38:Y:26443402-T-C | ** | ||||||
| hg19:Y:28633326-C-A hg38:Y:26487179-C-A | ** | ||||||
| hg19:Y:28655581-C-T hg38:Y:26509434-C-T | ** | ||||||
| hg19:Y:28724404-C-A hg38:Y:26578257-C-A | ** | ||||||
| hg19:Y:28733042-G-T hg38:Y:26586895-G-T | ** | ||||||
| hg38:Y:56849904-A-G | ** | ||||||
| hg38:Y:56859085-G-T | ** | ||||||
| hg19:Y:8674808-C-T hg38:Y:8806767-C-T | S11799 M2313 Z4858 E295 E205 | *** | |||||
| hg19:Y:14237670-T-C hg38:Y:12116964-T-C | CTS2254 | *** | |||||
| hg19:Y:15413302-C-A hg38:Y:13301422-C-A | *** | ||||||
| hg19:Y:15171226-CTTTTT-C hg38:Y:13059312-CTTTTT-C | 19×T | *** | |||||
| hg19:Y:15417603-G-GA hg38:Y:13305723-G-GA | 10×A | *** | |||||
| hg38:Y:21754385-G-T | *** | ||||||
| hg38:Y:10807238-C-T | *** | ||||||
| hg38:Y:11021347-CTCTCTACTGC-A,CTGTCCACTCCGC | *** | ||||||
| hg38:Y:11001401-C-A | *** | ||||||
| hg19:Y:13860034-G-C hg38:Y:11739328-G-C | DYZ17 | *** | |||||
| hg19:Y:4995902-C-A hg38:Y:5127861-C-A | *** | ||||||
| hg19:Y:14743666-T-C hg38:Y:12631735-T-C | *** | ||||||
| hg19:Y:13460309-G-A hg38:Y:11304633-G-A | *** | ||||||
| hg19:Y:15498664-C-A hg38:Y:13386784-C-A | *** | ||||||
| hg19:Y:7142784-C-A hg38:Y:7274743-C-A | *** | ||||||
| hg38:Y:10813581-C-T | *** | ||||||
| hg38:Y:10813587-C-T | *** | ||||||
| hg19:Y:17335744-C-A hg38:Y:15223864-C-A | *** | ||||||
| hg19:Y:28536043-CAT-C hg38:Y:26389896-CAT-C | *** | ||||||
| hg19:Y:13825032-T-C hg38:Y:11704326-T-C | DYZ17 | *** | |||||
| hg19:Y:6402370-C-A hg38:Y:6534329-C-A | *** | ||||||
| hg19:Y:4063977-C-A hg38:Y:4195936-C-A | *** | ||||||
| hg38:Y:10951323-C-A | *** | ||||||
| hg19:Y:3161081-C-A hg38:Y:3293040-C-A | *** | ||||||
| hg38:Y:10953629-C-A | *** | ||||||
| hg38:Y:56834612-C-G | *** | ||||||
| hg38:Y:11001411-C-G | *** | ||||||
| hg19:Y:8878987-G-T hg38:Y:9010946-G-T | *** | ||||||
| hg19:Y:8686410-C-A hg38:Y:8818369-C-A | *** | ||||||
| hg19:Y:17946655-T-A hg38:Y:15834775-T-A | *** | ||||||
| hg19:Y:8013230-T-C hg38:Y:8145189-T-C | *** | ||||||
| hg19:Y:15345635-C-A hg38:Y:13233754-C-A | *** | ||||||
| hg38:Y:10992677-C-A | FTA48354 | *** | |||||
| hg38:Y:56850489-G-T | *** | ||||||
| hg38:Y:10748023-T-A,C | *** | ||||||
| hg19:Y:8406679-C-A hg38:Y:8538638-C-A | *** | ||||||
| hg19:Y:7510562-C-A hg38:Y:7642521-C-A | *** | ||||||
| hg38:Y:10848042-C-A | *** | ||||||
| hg19:Y:15413217-TA-T hg38:Y:13301337-TA-T | 9×A | *** | |||||
| hg19:Y:2775547-C-A hg38:Y:2907506-C-A | *** | ||||||
| hg19:Y:2862852-G-T hg38:Y:2994811-G-T | *** | ||||||
| hg19:Y:4561234-C-A hg38:Y:4693193-C-A | *** | ||||||
| hg19:Y:4703245-C-A hg38:Y:4835204-C-A | FT321466 | *** | |||||
| hg19:Y:5459435-A-G hg38:Y:5591394-A-G | *** | ||||||
| hg19:Y:5625659-C-A hg38:Y:5757618-C-A | *** | ||||||
| hg19:Y:6385540-TA-T hg38:Y:6517499-TA-T | 8×A | *** | |||||
| hg19:Y:6759541-C-A hg38:Y:6891500-C-A | *** | ||||||
| hg19:Y:6898915-C-A hg38:Y:7030874-C-A | *** | ||||||
| hg19:Y:6967961-C-A hg38:Y:7099920-C-A | *** | ||||||
| hg19:Y:7181607-C-A hg38:Y:7313566-C-A | *** | ||||||
| hg19:Y:7994051-C-A hg38:Y:8126010-C-A | *** | ||||||
| hg19:Y:8714829-ATT-A hg38:Y:8846788-ATT-A | *** | ||||||
| hg19:Y:8730841-A-G hg38:Y:8862800-A-G | *** | ||||||
| hg19:Y:9469729-C-A hg38:Y:9632120-C-A | *** | ||||||
| hg38:Y:10821048-T-C | *** | ||||||
| hg38:Y:10852443-C-A | *** | ||||||
| hg38:Y:10875727-A-C | *** | ||||||
| hg19:Y:13453190-A-G,T hg38:Y:11297514-A-G,T | *** | ||||||
| hg19:Y:13453335-A-G hg38:Y:11297659-A-G | *** | ||||||
| hg19:Y:13471161-G-T hg38:Y:11315485-G-T | *** | ||||||
| hg19:Y:13471169-A-T hg38:Y:11315493-A-T | *** | ||||||
| hg19:Y:14294742-C-A hg38:Y:12174036-C-A | *** | ||||||
| hg19:Y:14370762-C-A hg38:Y:12250058-C-A | *** | ||||||
| hg19:Y:14614123-C-A hg38:Y:12502321-C-A | *** | ||||||
| hg19:Y:14693303-G-A hg38:Y:12581369-G-A | *** | ||||||
| hg19:Y:14929198-G-GA hg38:Y:12817263-G-GA | 9×A | *** | |||||
| hg19:Y:14951543-TGG-T hg38:Y:12839617-TGG-T | *** | ||||||
| hg19:Y:15199602-C-A hg38:Y:13087688-C-A | *** | ||||||
| hg19:Y:15221463-C-A hg38:Y:13109549-C-A | *** | ||||||
| hg19:Y:15253034-C-A hg38:Y:13141120-C-A | *** | ||||||
| hg19:Y:15358906-C-A hg38:Y:13247026-C-A | *** | ||||||
| hg19:Y:15451044-C-A hg38:Y:13339164-C-A | *** | ||||||
| hg19:Y:15620047-G-A hg38:Y:13508167-G-A | *** | ||||||
| hg19:Y:15746978-C-A hg38:Y:13635098-C-A | *** | ||||||
| hg19:Y:15786212-C-A hg38:Y:13674332-C-A | *** | ||||||
| hg19:Y:15979829-C-A hg38:Y:13867949-C-A | *** | ||||||
| hg19:Y:16029021-C-T hg38:Y:13917141-C-T | *** | ||||||
| hg19:Y:16202183-C-A hg38:Y:14090303-C-A | *** | ||||||
| hg19:Y:16234757-TA-T hg38:Y:14122877-TA-T | *** | ||||||
| hg19:Y:16533146-C-A hg38:Y:14421266-C-A | *** | ||||||
| hg19:Y:16656605-C-A hg38:Y:14544725-C-A | *** | ||||||
| hg19:Y:16748401-C-A hg38:Y:14636521-C-A | *** | ||||||
| hg19:Y:16852792-T-C hg38:Y:14740912-T-C | *** | ||||||
| hg19:Y:16970482-C-A hg38:Y:14858602-C-A | *** | ||||||
| hg19:Y:18864946-GAAAAAA-G hg38:Y:16753066-GAAAAAA-G | 19×A | *** | |||||
| hg19:Y:18897071-A-G hg38:Y:16785191-A-G | *** | ||||||
| hg19:Y:19461889-C-T hg38:Y:17350009-C-T | *** | ||||||
| hg19:Y:21080394-TTTTGGG-T hg38:Y:18918508-TTTTGGG-T | *** | ||||||
| hg19:Y:21148909-G-A hg38:Y:18987023-G-A | *** | ||||||
| hg19:Y:21231522-CA-C hg38:Y:19069636-CA-C | 8×A | *** | |||||
| hg19:Y:21396198-C-A hg38:Y:19234312-C-A | *** | ||||||
| hg19:Y:21756018-A-G hg38:Y:19594132-A-G | *** | ||||||
| hg19:Y:21950735-T-C hg38:Y:19788849-T-C | *** | ||||||
| hg19:Y:22202418-C-T hg38:Y:20040532-C-T | *** | ||||||
| hg19:Y:22240741-T-C hg38:Y:20078855-T-C | DYZ19 | *** | |||||
| hg19:Y:22649669-AT-A hg38:Y:20487783-AT-A | 8×T | *** | |||||
| hg19:Y:23075262-C-A hg38:Y:20913376-C-A | *** | ||||||
| hg19:Y:23257685-A-G hg38:Y:21095799-A-G | *** | ||||||
| hg19:Y:23324069-C-A hg38:Y:21162183-C-A | *** | ||||||
| hg19:Y:23369739-C-A hg38:Y:21207853-C-A | *** | ||||||
| hg19:Y:23436770-A-T hg38:Y:21274884-A-T | *** | ||||||
| hg19:Y:23608749-ATT-A hg38:Y:21446863-ATT-A | 10×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 747309 | 8540034 | 6977175 | 6927410 |
| Used in age calculations | 8540034 | 6977175 | 6927410 |
| Counts of SNPs | 4 | 3 |
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