Watson
BigY3: IN24359, BigY2: IN24359MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 IN24359 | BigY2 IN24359 |
---|---|---|---|---|---|---|---|---|---|
13687916-C-T | 11532240-C-T | A* | |||||||
10037726-C-A | 10200117-C-A | A* | |||||||
26136607-G-T | 23990460-G-T | P1_Y1 | A* | A* | |||||
5349961-G-A | 5481920-G-A | FT132998 | A* | ||||||
28816565-T-TATGGA | 26670418-T-TATGGA | A* | A* | ||||||
56832584-T-TTGA | A* | ||||||||
10037727-C-T | 10200118-C-T | A* | |||||||
8267867-C-T | 8399826-C-T | FT179296 | Y | Y | + | + | |||
13228437-G-A | 11072761-G-A | BY84683 | + | + | |||||
14638629-C-T | 12526698-C-T | Y | Y | + | + | ||||
14841139-T-C | 12729206-T-C | BY153735 | Y | Y | + | + | |||
6969100-G-A | 7101059-G-A | FT71811 | Y | Y | + | ** | |||
13645042-T-A | 11489366-T-A | FT447022 | + | ** | |||||
15437098-A-G | 13325218-A-G | FT117093 | Y | Y | + | + | |||
16778199-C-T | 14666319-C-T | BY154212 | Y | Y | + | + | |||
17251265-C-T | 15139385-C-T | BY154336 | Y | Y | + | + | |||
17437637-G-A | 15325757-G-A | FT117964 | Y | Y | + | ** | |||
18123128-C-T | 16011248-C-T | BY154579 | Y | Y | + | + | |||
23124271-G-C | 20962385-G-C | BY155518 | Y | Y | + | + | |||
4567486-A-T | 4699445-A-T | FT113734 | + | ** | |||||
4029580-T-C | 4161539-T-C | FT113314 | + | ||||||
10886792-C-T | FT435564 | + | |||||||
5076267-C-T | 5208226-C-T | FT71630 | + | ||||||
4777744-A-G | 4909703-A-G | + | |||||||
8499010-C-CT | 8630969-C-CT | 10×T | * | ** | |||||
22422336-T-C | 20260450-T-C | DYZ19 | * | * | |||||
13257439-G-T | 11101763-G-T | ** | |||||||
13932140-C-A | 11811434-C-A | 13×AT | ** | ||||||
13895371-C-A | 11774665-C-A | ** | |||||||
11663382-C-T | ** | ||||||||
13728590-A-C | 11572914-A-C | ** | |||||||
13728585-G-C | 11572909-G-C | ** | |||||||
13296216-G-T | 11140540-G-T | ** | |||||||
13294266-C-A | 11138590-C-A | ** | |||||||
13271471-C-A | 11115795-C-A | ** | |||||||
11027431-C-A | ** | ||||||||
21805779-C-A | 19643893-C-A | ** | |||||||
11030333-TC-T | ** | ||||||||
11007861-G-T | ** | ||||||||
11007418-C-A | ** | ||||||||
11006683-A-C | ** | ||||||||
11006678-C-G | ** | ||||||||
11006675-C-A | ** | ||||||||
11006647-A-C | ** | ||||||||
11006642-A-G | ** | ||||||||
11006069-C-A | ** | ||||||||
10992084-C-T | ** | ||||||||
10969018-C-A | ** | ||||||||
13940521-C-A | 11819815-C-A | ** | |||||||
14041633-G-T | 11920927-G-T | ** | |||||||
13976801-C-T | 11856095-C-T | ** | |||||||
14609620-C-T | 12497822-C-T | ** | |||||||
18635350-T-C | 16523470-T-C | ** | |||||||
15114749-C-A | 13002836-C-A | ** | |||||||
15114111-C-A | 13002198-C-A | ** | |||||||
15047479-C-A | 12935570-C-A | ** | |||||||
19385329-A-G | 17273449-A-G | ** | |||||||
14795626-G-T | 12683697-G-T | ** | |||||||
14743901-G-T | 12631970-G-T | ** | |||||||
14712375-A-G | 12600442-A-G | ** | |||||||
14689012-C-A | 12577078-C-A | ** | |||||||
21770726-G-A | 19608840-G-A | ** | |||||||
14560556-C-A | 12448757-C-A | ** | |||||||
10956170-C-A | ** | ||||||||
14470642-A-G | 12349911-A-G | ** | |||||||
14464222-G-A | 12343495-G-A | ** | |||||||
14451841-C-A | 12331114-C-A | ** | |||||||
14351411-C-CA | 12230706-C-CA | ** | |||||||
14348022-C-A | 12227317-C-A | ** | |||||||
14339100-T-A | 12218395-T-A | ** | |||||||
14328868-C-A | 12208162-C-A | ** | |||||||
14322139-C-A | 12201433-C-A | ** | |||||||
14298089-C-A | 12177383-C-A | ** | |||||||
14227602-G-C | 12106896-G-C | ** | |||||||
14189362-GA-G | 12068656-GA-G | ** | |||||||
10969014-T-G | ** | ||||||||
10943309-C-A | ** | ||||||||
10945238-C-A | ** | ||||||||
6911321-G-T | 7043280-G-T | ** | |||||||
8170361-G-A | 8302320-G-A | ** | |||||||
8170360-G-C | 8302319-G-C | ** | |||||||
8092669-C-A | 8224628-C-A | ** | |||||||
8020255-C-A | 8152214-C-A | ** | |||||||
22876964-T-TAAAA | 20715078-T-TAAAA | 20×A | ** | ||||||
7435386-C-A | 7567345-C-A | ** | |||||||
7392544-C-A | 7524503-C-A | ** | |||||||
7322887-T-G | 7454846-T-G | ** | |||||||
7284355-T-G | 7416314-T-G | ** | |||||||
7127253-C-A | 7259212-C-A | ** | |||||||
26407162-T-A | 24261015-T-A | P1_Y1 | ** | ||||||
6669642-T-C | 6801601-T-C | ** | |||||||
8170382-T-G | 8302341-T-G | ** | |||||||
6401741-T-C | 6533700-T-C | FT276322 | ** | ||||||
6383344-C-A | 6515303-C-A | ** | |||||||
6279809-A-G | 6411768-A-G | IR3_Dst | ** | ||||||
6091497-G-T | 6223456-G-T | ** | |||||||
5927628-T-C | 6059587-T-C | ** | |||||||
5887784-G-A | 6019743-G-A | ** | ** | ||||||
5841666-C-A | 5973625-C-A | ** | |||||||
5758365-G-C | 5890324-G-C | ** | |||||||
5635178-G-T | 5767137-G-T | ** | |||||||
5406044-T-C | 5538003-T-C | ** | |||||||
5364956-G-T | 5496915-G-T | ** | |||||||
8170372-A-T | 8302331-A-T | ** | |||||||
8170389-T-C | 8302348-T-C | ** | |||||||
15124137-T-G | 13012224-T-G | ** | |||||||
9503989-A-G | 9666380-A-G | FT20448 | ** | ||||||
10906572-ACT-A | ** | ||||||||
10881657-C-A | ** | ||||||||
10863482-A-C | ** | ||||||||
10832088-C-A | ** | ||||||||
10831900-C-A | ** | ||||||||
10828952-C-T | ** | ||||||||
10821547-C-A | ** | ||||||||
10752606-C-A | ** | ||||||||
10657849-T-C | ** | ||||||||
10027344-G-T | 10189735-G-T | ** | |||||||
10012816-C-A | 10175207-C-A | ** | |||||||
9465917-C-A | 9628308-C-A | ** | |||||||
8170392-C-T | 8302351-C-T | ** | |||||||
9420425-C-A | 9582816-C-A | ** | |||||||
9411548-C-A | 9573939-C-A | ** | |||||||
9093305-C-A | 9255696-C-A | ** | |||||||
9089116-T-C | 9251507-T-C | ** | |||||||
8987710-A-G | 9150101-A-G | ** | |||||||
9117572-G-T | ** | ||||||||
9111429-G-T | ** | ||||||||
8725463-C-A | 8857422-C-A | ** | |||||||
8665793-T-A | 8797752-T-A | ** | |||||||
8479572-T-C | 8611531-T-C | ** | |||||||
8270144-C-A | 8402103-C-A | ** | |||||||
22781612-AT-A | 20619726-AT-A | ** | |||||||
15124127-T-G | 13012214-T-G | ** | |||||||
56873860-T-C | ** | ||||||||
14862939-ATTTT-A | 12751005-ATTTT-A | 12×T | ** | ||||||
22070374-A-C | 19908488-A-C | ** | |||||||
23004484-C-A | 20842598-C-A | ** | |||||||
22974502-C-A | 20812616-C-A | ** | |||||||
22882702-G-T | 20720816-G-T | ** | |||||||
22875266-C-A | 20713380-C-A | ** | |||||||
22804051-C-A | 20642165-C-A | ** | |||||||
22792641-C-A | 20630755-C-A | ** | |||||||
22742455-C-A | 20580569-C-A | ** | |||||||
22720465-A-C | 20558579-A-C | ** | |||||||
22239433-T-G | 20077547-T-G | DYZ19 | ** | ||||||
22073970-C-A | 19912084-C-A | ** | |||||||
21979991-G-T | 19818105-G-T | ** | |||||||
23044433-C-A | 20882547-C-A | ** | |||||||
21974703-G-T | 19812817-G-T | ** | |||||||
21911886-T-C | 19750000-T-C | ** | |||||||
21911883-A-C | 19749997-A-C | ** | |||||||
21859564-C-A | 19697678-C-A | ** | |||||||
21846439-C-CT | 19684553-C-CT | 8×T | ** | ||||||
21697158-G-T | 19535272-G-T | ** | |||||||
21682213-C-CA | 19520327-C-CA | ** | |||||||
21682205-TA-T | 19520319-TA-T | ** | |||||||
21676957-G-A | 19515071-G-A | ** | |||||||
21602965-A-C | 19441079-A-C | ** | |||||||
21580579-C-A | 19418693-C-A | ** | |||||||
23026203-C-A | 20864317-C-A | ** | |||||||
23082047-T-G | 20920161-T-G | ** | |||||||
21443179-C-A | 19281293-C-A | ** | |||||||
24494423-C-A | 22348276-C-A | ** | |||||||
20022402-G-T | 17910522-G-T | P5_Prx | ** | ||||||
56859052-C-T | ** | ||||||||
28679595-A-T | 26533448-A-T | ** | |||||||
28549894-C-A | 26403747-C-A | ** | |||||||
28531462-C-T | 26385315-C-T | ** | |||||||
28470499-T-A | 26324352-T-A | ** | |||||||
26314797-G-A | 24168650-G-A | P1_Y1 | ** | ||||||
26138685-C-A | 23992538-C-A | P1_Y1 | ** | ||||||
6089296-GATAT-G | 6221255-GATAT-G | 10×AT | ** | ||||||
25815193-GT-G | 23669046-GT-G | P1_b3 | ** | ||||||
24480925-G-T | 22334778-G-T | ** | |||||||
23082052-T-A | 20920166-T-A | ** | |||||||
24391861-C-A | 22245714-C-A | ** | |||||||
23955232-G-T | 21809085-G-T | ** | |||||||
23840690-G-A | 21678804-G-A | ** | |||||||
23774806-C-A | 21612920-C-A | ** | |||||||
23642585-T-C | 21480699-T-C | ** | |||||||
23495607-C-A | 21333721-C-A | ** | |||||||
23425311-T-C | 21263425-T-C | ** | |||||||
23391513-T-C | 21229627-T-C | ** | |||||||
23269220-C-A | 21107334-C-A | ** | |||||||
3206569-A-T | 3338528-A-T | ** | |||||||
23087760-C-A | 20925874-C-A | ** | |||||||
21514179-C-A | 19352293-C-A | ** | |||||||
21438537-C-A | 19276651-C-A | ** | |||||||
15128027-G-A | 13016114-G-A | ** | |||||||
16503680-T-A | 14391800-T-A | ** | |||||||
17395603-T-G | 15283723-T-G | ** | |||||||
17353274-G-C | 15241394-G-C | ** | |||||||
17302358-C-A | 15190478-C-A | ** | |||||||
4841706-A-T | 4973665-A-T | ** | |||||||
16765618-T-C | 14653738-T-C | ** | |||||||
16765613-A-G | 14653733-A-G | ** | |||||||
16746299-C-A | 14634419-C-A | ** | |||||||
16680706-T-C | 14568826-T-C | ** | |||||||
16652101-G-A | 14540221-G-A | ** | |||||||
16590894-G-T | 14479014-G-T | ** | |||||||
16276119-G-T | 14164239-G-T | ** | |||||||
17515500-T-TTGCTTAAACCCAGGA | 15403620-T-TTGCTTAAACCCAGGA | ** | |||||||
16250649-T-TA | 14138769-T-TA | ** | |||||||
5314522-G-A | 5446481-G-A | ** | |||||||
16135074-C-A | 14023194-C-A | P8_Dst | ** | ||||||
16084380-T-C | 13972500-T-C | ** | |||||||
16047848-T-C | 13935968-T-C | ** | |||||||
16005435-T-A | 13893555-T-A | ** | |||||||
15604171-A-C | 13492291-A-C | ** | |||||||
15604170-A-G | 13492290-A-G | ** | |||||||
12371975-G-A | ** | ||||||||
15351194-A-G | 13239313-A-G | ** | |||||||
15138257-C-A | 13026344-C-A | ** | |||||||
17426223-C-A | 15314343-C-A | ** | |||||||
17934065-G-T | 15822185-G-T | ** | |||||||
21435002-C-A | 19273116-C-A | ** | |||||||
18822166-A-T | 16710286-A-T | ** | |||||||
21352423-T-C | 19190537-T-C | ** | |||||||
21207029-G-A | 19045143-G-A | ** | |||||||
21082365-AGAAG-A | 18920479-AGAAG-A | ** | |||||||
21045936-C-A | 18884050-C-A | ** | |||||||
20614778-G-T | 18452892-G-T | P4_Prx | ** | ||||||
20504104-AG-A | 18342218-AG-A | P5_Dst | ** | ||||||
20504103-G-A | 18342217-G-A | P5_Dst | ** | ||||||
20487979-T-G | 18326093-T-G | P5_Dst | ** | ||||||
20487974-T-G | 18326088-T-G | P5_Dst | ** | ||||||
19206703-C-A | 17094823-C-A | ** | |||||||
19054062-C-A | 16942182-C-A | ** | |||||||
18814902-A-C | 16703022-A-C | ** | |||||||
18036589-C-G | 15924709-C-G | ** | |||||||
18712847-G-A | 16600967-G-A | ** | |||||||
18656904-C-A | 16545024-C-A | ** | |||||||
18636725-C-A | 16524845-C-A | ** | |||||||
18606309-T-C | 16494429-T-C | ** | |||||||
18564316-C-A | 16452436-C-A | 19×T | ** | ||||||
18386483-C-A | 16274603-C-A | P6_Gap | ** | ||||||
18192586-C-A | 16080706-C-A | ** | |||||||
18158982-T-G | 16047102-T-G | ** | |||||||
18158978-T-C | 16047098-T-C | ** | |||||||
18158971-A-C | 16047091-A-C | ** | |||||||
18036603-T-A | 15924723-T-A | ** | |||||||
56862580-ATACCT-A | ** | ||||||||
8170386-G-T | 8302345-G-T | ** | |||||||
5212253-C-A | 5344212-C-A | ** | |||||||
14103923-C-A | 11983217-C-A | ** | |||||||
8690704-C-A | 8822663-C-A | ** | |||||||
10927635-G-T | ** | ||||||||
14826573-G-T | 12714640-G-T | ** | |||||||
10973658-A-G | ** | ** | |||||||
28766190-C-A | 26620043-C-A | ** | |||||||
19536240-G-T | 17424360-G-T | ** | |||||||
5063133-G-T | 5195092-G-T | ** | |||||||
10667034-C-A | ** | ||||||||
10983639-A-T | ** | ||||||||
17170191-G-T | 15058311-G-T | ** | |||||||
13919589-C-A | 11798883-C-A | ** | |||||||
10913707-G-A | FT219233 | ** | |||||||
23277438-C-A | 21115552-C-A | ** | |||||||
21979997-G-T | 19818111-G-T | ** | |||||||
11023054-T-C | ** | ||||||||
10796256-G-T | ** | ||||||||
17779444-G-T | 15667564-G-T | ** | |||||||
15950546-T-C | 13838666-T-C | ** | |||||||
20774943-A-C | 18613057-A-C | P4_Prx | ** | ||||||
13576026-C-A | 11420350-C-A | ** | |||||||
4521606-C-A | 4653565-C-A | ** | |||||||
18872961-C-A | 16761081-C-A | ** | |||||||
10964059-G-T | ** | ||||||||
17597154-CTTTTT-C | 15485274-CTTTTT-C | 20×T | ** | ||||||
10860873-G-T | ** | ||||||||
10898929-G-T | ** | ||||||||
8170394-C-T | 8302353-C-T | FT300355 | ** | ||||||
15680083-T-G | 13568203-T-G | ** | |||||||
13218973-A-T | 11063297-A-T | ** | |||||||
15558088-C-A | 13446208-C-A | ** | |||||||
10772742-G-T | ** | ||||||||
7169819-C-A | 7301778-C-A | ** | |||||||
16121686-A-AT | 14009806-A-AT | P8_Prx | ** | ||||||
10772618-T-C | ** | ||||||||
10759225-C-A | ** | ||||||||
28655571-G-A | 26509424-G-A | ** | |||||||
14609606-A-T | 12497808-A-T | ** | |||||||
10673204-T-C | ** | ||||||||
10913716-G-T | ** | ||||||||
18270329-C-A | 16158449-C-A | ** | |||||||
10753650-G-GCT | ** | ||||||||
2824375-C-A | 2956334-C-A | ** | |||||||
15971534-C-CT | 13859654-C-CT | 9×T | ** | ||||||
13461124-G-T | 11305448-G-T | ** | |||||||
10759294-T-G | ** | ||||||||
10759251-G-T | ** | ||||||||
10673239-T-C | ** | ||||||||
10673231-A-C | ** | ||||||||
10673206-C-A | ** | ||||||||
10949560-T-A | ** | ||||||||
10879742-C-A | ** | ||||||||
13722311-A-T | 11566635-A-T | ** | |||||||
21909606-C-A | 19747720-C-A | ** | |||||||
15477291-C-CAA | 13365411-C-CAA | 18×A | ** | ||||||
8170368-G-A | 8302327-G-A | ** | |||||||
5635228-G-T | 5767187-G-T | ** | |||||||
10792785-T-C | ** | ||||||||
11021992-C-A | ** | ||||||||
10817961-A-C | ** | ||||||||
10817960-T-C | ** | ||||||||
10817956-A-C | ** | ||||||||
11002078-C-A | ** | ||||||||
10682749-TATTCC-T | ** | ||||||||
21682196-T-C | 19520310-T-C | ** | |||||||
9088875-C-A | 9251266-C-A | ** | |||||||
18779448-C-A | 16667568-C-A | ** | |||||||
28815151-A-C | 26669004-A-C | ** | |||||||
14484394-C-A | 12363663-C-A | ** | |||||||
19375198-C-A | 17263318-C-A | FGC19987 | ** | ||||||
7003020-A-C | 7134979-A-C | FT390167 | ** | ||||||
23413758-C-A | 21251872-C-A | ** | |||||||
16765617-G-A | 14653737-G-A | ** | |||||||
7003011-C-T | 7134970-C-T | FT390166 | ** | ||||||
22297932-G-A | 20136046-G-A | DYZ19 | ** | ||||||
7318490-TTTTA-T | 7450449-TTTTA-T | 11×TTTA | ** | ||||||
16121694-C-A | 14009814-C-A | P8_Prx | ** | ||||||
10769039-G-T | ** | ||||||||
21531373-C-A | 19369487-C-A | ** | |||||||
10828177-C-CGGAAG | ** | ||||||||
21709230-G-C | 19547344-G-C | ** | |||||||
10852749-CATTCT-C | ** | ||||||||
15047588-C-A | 12935679-C-A | ** | |||||||
6454578-C-A | 6586537-C-A | ** | |||||||
10982317-T-A | ** | ||||||||
10982300-C-T | ** | ||||||||
10982287-G-A | ** | ||||||||
10982286-G-C | ** | ||||||||
10852761-T-C | ** | ||||||||
17355247-C-A | 15243367-C-A | ** | |||||||
15057738-ATTT-A | 12945830-ATTT-A | 18×T | ** | ||||||
10908391-A-G | ** | ||||||||
18125550-C-A | 16013670-C-A | ** | |||||||
10908390-C-T | ** | ||||||||
10908375-G-A | ** | ||||||||
10908361-G-C | ** | ||||||||
22614304-C-A | 20452418-C-A | ** | |||||||
10969986-T-C | ** | ||||||||
11009251-G-T | ** | ||||||||
10932127-C-A | ** | ||||||||
10903836-A-T | ** | ||||||||
10894498-TTCCCCTCTAC-T | ** | ||||||||
10807906-C-A | ** | ||||||||
14273098-G-T | 12152392-G-T | ** | |||||||
17576232-C-A | 15464352-C-A | ** | |||||||
27847763-TG-T | 25701616-TG-T | P1_Y2 | ** | ||||||
13722319-G-A | 11566643-G-A | ** | |||||||
10773664-C-A | ** | ||||||||
14900674-G-T | 12788741-G-T | ** | |||||||
10749766-C-A | ** | ||||||||
23382482-C-A | 21220596-C-A | ** | |||||||
8230327-C-A | 8362286-C-A | ** | |||||||
9978017-G-T | 10140408-G-T | ** | |||||||
10656497-C-A | ** | ||||||||
24450621-C-A | 22304474-C-A | ** | |||||||
17195099-C-A | 15083219-C-A | ** | |||||||
14609601-T-C | 12497803-T-C | ** | |||||||
14272823-C-A | 12152117-C-A | ** | |||||||
17119125-C-A | 15007245-C-A | ** | |||||||
6037614-C-A | 6169573-C-A | ** | |||||||
14339803-A-T | 12219098-A-T | ** | |||||||
9107948-G-T | ** | ||||||||
5523740-C-A | 5655699-C-A | ** | |||||||
8379438-C-A | 8511397-C-A | ** | |||||||
8181409-A-C | 8313368-A-C | ** | |||||||
21960453-C-A | 19798567-C-A | ** | |||||||
8686343-C-A | 8818302-C-A | ** | |||||||
17333995-C-A | 15222115-C-A | ** | |||||||
3663294-C-A | 3795253-C-A | ** | |||||||
4433189-G-T | 4565148-G-T | ** | |||||||
4241484-C-A | 4373443-C-A | ** | |||||||
4235960-T-G | 4367919-T-G | ** | |||||||
4193232-G-T | 4325191-G-T | ** | |||||||
4136519-A-T | 4268478-A-T | ** | |||||||
4127480-A-G | 4259439-A-G | ** | |||||||
4087253-C-A | 4219212-C-A | ** | |||||||
3817798-C-A | 3949757-C-A | ** | |||||||
3568602-C-T | 3700561-C-T | ** | |||||||
8181419-T-A | 8313378-T-A | ** | |||||||
3545666-C-A | 3677625-C-A | ** | |||||||
3389089-C-A | 3521048-C-A | ** | |||||||
3033734-G-T | 3165693-G-T | ** | |||||||
2975317-A-G | 3107276-A-G | ** | |||||||
2879265-G-A | 3011224-G-A | ** | |||||||
2812621-AT-A | 2944580-AT-A | 8×T | ** | ||||||
21709225-T-G | 19547339-T-G | ** | |||||||
7366430-C-A | 7498389-C-A | ** | |||||||
14285826-C-A | 12165120-C-A | ** | |||||||
23058689-C-A | 20896803-C-A | ** | |||||||
8649789-C-CAA | 8781748-C-CAA | 13×A | ** | ||||||
22965522-G-T | 20803636-G-T | ** | |||||||
13804004-A-T | 11683298-A-T | ** | |||||||
17605488-C-A | 15493608-C-A | FT59477 | ** | ||||||
8230338-C-A | 8362297-C-A | ** | |||||||
16679469-G-A | 14567589-G-A | ** | |||||||
7534626-C-A | 7666585-C-A | ** | |||||||
13463099-C-T | 11307423-C-T | ** | |||||||
4521527-C-A | 4653486-C-A | ** | |||||||
17564903-C-A | 15453023-C-A | ** | |||||||
4244811-C-A | 4376770-C-A | ** | |||||||
2854945-C-A | 2986904-C-A | ** | |||||||
14609613-A-G | 12497815-A-G | ** | |||||||
19600524-TGG-T | 17488644-TGG-T | P5_Prx | ** | ||||||
22037557-C-A | 19875671-C-A | ** | |||||||
10865673-A-C | ** | ||||||||
18036584-T-C | 15924704-T-C | ** | |||||||
13871915-C-A | 11751209-C-A | ** | |||||||
10946551-C-A | *** | ||||||||
19048928-TAA-T,TA | 16937048-TAA-T,TA | 18×A | *** | ||||||
3833953-ATCTC-A | 3965912-ATCTC-A | *** | |||||||
13457763-T-C | 11302087-T-C | *** | |||||||
28645643-C-A | 26499496-C-A | *** | |||||||
6751696-T-C | 6883655-T-C | *** | |||||||
10969478-C-T | FT438578 | *** | |||||||
9954306-T-TA | 10116697-T-TA | 9×A | *** | ||||||
15846644-AT-A | 13734764-AT-A | 10×T | *** | ||||||
23040157-TAAAA-T,TAAA | 20878271-TAAAA-T,TAAA | 17×A | *** | ||||||
13224413-C-A | 11068737-C-A | *** | |||||||
8736400-C-A | 8868359-C-A | *** | |||||||
15163300-A-AT,ATT | 13051386-A-AT,ATT | 15×T | *** | ||||||
23088993-C-A | 20927107-C-A | *** | |||||||
8143654-C-A | 8275613-C-A | *** | |||||||
56862621-CTTTTT-C | 14×T | *** | |||||||
24407375-G-A | 22261228-G-A | *** | |||||||
18714038-C-A | 16602158-C-A | *** | |||||||
23431177-C-A | 21269291-C-A | *** | |||||||
7434980-GCCCATGATCCAATTACTTCCC-G | 7566939-GCCCATGATCCAATTACTTCCC-G | *** | |||||||
23761605-AGAAAAG-A | 21599719-AGAAAAG-A | *** | |||||||
10974584-C-A | *** | ||||||||
56840663-C-A | *** | ||||||||
56847392-G-A | *** | ||||||||
15631808-T-C | 13519928-T-C | *** | |||||||
3848975-C-A | 3980934-C-A | *** | |||||||
7418073-CAAAAAA-C | 7550032-CAAAAAA-C | 22×A | *** | ||||||
13464458-C-T | 11308782-C-T | *** | |||||||
17490094-AAG-A,AA | 15378214-AAG-A,AA | *** | |||||||
18545034-TA-T | 16433154-TA-T | *** | |||||||
8716918-A-AT | 8848877-A-AT | 10×T | *** | ||||||
13470653-ACGGTCT-A | 11314977-ACGGTCT-A | *** | |||||||
21324783-T-C | 19162897-T-C | *** | |||||||
14285917-C-A | 12165211-C-A | *** | |||||||
22046841-A-G | 19884955-A-G | *** | |||||||
16728461-T-C | 14616581-T-C | *** | |||||||
17919855-GAA-G | 15807975-GAA-G | 25×A | *** | ||||||
22804006-T-A | 20642120-T-A | *** | |||||||
22804049-C-T | 20642163-C-T | *** | |||||||
14298570-C-A | 12177864-C-A | *** | |||||||
16813075-G-GCA | 14701195-G-GCA | 15×CA | *** | ||||||
9832691-C-A | 9995082-C-A | M3495 PF2902 | *** | ||||||
17061018-T-C | 14949138-T-C | *** | |||||||
16095601-TA-T | 13983721-TA-T | *** | |||||||
15179986-C-CAA | 13068072-C-CAA | 15×A | *** | ||||||
2679025-T-C | 2810984-T-C | *** | |||||||
13479115-C-T | 11323439-C-T | *** | |||||||
18890610-G-A | 16778730-G-A | *** | |||||||
18890612-A-G | 16778732-A-G | *** | |||||||
17169345-TA-T | 15057465-TA-T | *** | |||||||
4853216-T-C | 4985175-T-C | *** | |||||||
10776104-CCACTCCATTT-C,CCATTCCATTC | *** | ||||||||
14213571-AGAAG-A | 12092865-AGAAG-A | 4×GAAG | *** | ||||||
15888306-C-A | 13776426-C-A | *** | |||||||
3306191-A-G | 3438150-A-G | *** | |||||||
23573679-C-T | 21411793-C-T | F3478 | *** | ||||||
10041973-G-T | 10204364-G-T | *** | |||||||
7375146-G-T | 7507105-G-T | *** | |||||||
14862938-T-C | 12751004-T-C | *** | |||||||
15197744-CT-C | 13085830-CT-C | 10×T | *** | ||||||
10911739-A-G | *** | ||||||||
10946585-TGTGCA-T | *** | ||||||||
10925005-T-C | *** | ||||||||
5170787-CT-C | 5302746-CT-C | 10×T | *** | ||||||
18648513-CT-C | 16536633-CT-C | 9×T | *** | ||||||
21880831-C-T | 19718945-C-T | *** | |||||||
4537586-C-CTT | 4669545-C-CTT | 21×T | *** | ||||||
10744237-C-T | *** | ||||||||
18397045-C-A | 16285165-C-A | P6_Gap | *** | ||||||
10969465-T-C | *** | ||||||||
10825281-ATTCCATTCCATTC-A,ATTCCATTCTATTC | *** | ||||||||
18158962-G-T | 16047082-G-T | *** | |||||||
10822528-T-C | *** | ||||||||
16374686-G-GAAAA | 14262806-G-GAAAA | 19×A | *** | ||||||
18718221-CA-C | 16606341-CA-C | *** | |||||||
10967518-CA-C | *** | ||||||||
10967516-T-TG | *** | ||||||||
10775391-CT-C | *** | ||||||||
10925000-T-A | FT436732 | *** | |||||||
16449261-A-G | 14337381-A-G | *** | |||||||
19307151-C-A | 17195271-C-A | *** | |||||||
15918313-C-A | 13806433-C-A | *** | |||||||
16957507-A-G | 14845627-A-G | *** | |||||||
17010467-A-G | 14898587-A-G | *** | |||||||
17169919-CA-C,CAA | 15058039-CA-C,CAA | 11×A | *** | ||||||
17173410-C-A | 15061530-C-A | *** | |||||||
7389275-C-A | 7521234-C-A | *** | |||||||
10955506-C-CTGTAA | *** | ||||||||
10859911-C-A | *** | ||||||||
18090339-C-A | 15978459-C-A | *** | |||||||
10911722-A-C,T | *** | ||||||||
4890660-CAAAA-C | 5022619-CAAAA-C | 18×A | *** | ||||||
10961333-G-T | *** | ||||||||
17755285-C-A | 15643405-C-A | *** | |||||||
10883670-T-A | *** | ||||||||
9823037-C-A | 9985428-C-A | *** | |||||||
3507900-G-GA | 3639859-G-GA | 10×A | *** | ||||||
23792029-C-CTT | 21630143-C-CTT | 15×T | *** | ||||||
24417211-C-A | 22271064-C-A | *** | |||||||
16547894-C-CA | 14436014-C-CA | 11×A | *** | ||||||
10911713-A-T | *** | ||||||||
11671172-G-A | *** | ||||||||
15479195-C-A | 13367315-C-A | *** | |||||||
7156769-C-A | 7288728-C-A | *** | |||||||
22037471-C-A | 19875585-C-A | *** | |||||||
23770526-A-AT | 21608640-A-AT | 9×T | *** | ||||||
13726107-A-T | 11570431-A-T | *** | |||||||
22618569-C-A | 20456683-C-A | *** | |||||||
14722193-C-A | 12610261-C-A | *** | |||||||
22655437-C-A | 20493551-C-A | *** | |||||||
15622778-C-CA | 13510898-C-CA | 9×A | *** | ||||||
10911727-G-T | *** | ||||||||
5212454-C-A | 5344413-C-A | *** | |||||||
15458426-C-A | 13346546-C-A | *** | |||||||
22865636-C-A | 20703750-C-A | *** | |||||||
10989066-C-A | *** | ||||||||
14272686-CTTTT-C,CTTT | 12151980-CTTTT-C,CTTT | 15×T | *** | ||||||
15775955-G-T | 13664075-G-T | FT343324 | *** | ||||||
10911728-G-T | *** | ||||||||
21209850-C-A | 19047964-C-A | *** | |||||||
10797970-CGTTCC-A,CGCTCC | *** | ||||||||
10942639-T-C | *** | ||||||||
22774540-C-A | 20612654-C-A | *** | |||||||
10801577-C-A | *** | ||||||||
21183766-C-A | 19021880-C-A | *** | |||||||
15904149-CAAAAAA-C | 13792269-CAAAAAA-C | 20×A | *** | ||||||
9865065-G-T | 10027456-G-T | *** | |||||||
9028477-AAAAT-A | 9190868-AAAAT-A | *** | |||||||
9839688-C-A | 10002079-C-A | *** | |||||||
9475723-G-T | 9638114-G-T | *** | |||||||
21528336-G-T | 19366450-G-T | *** | |||||||
10969472-C-A | *** | ||||||||
10625044-T-G | *** | ||||||||
18198393-ACTCT-A | 16086513-ACTCT-A | 11×CT | *** | ||||||
15956644-A-G | 13844764-A-G | FT96633 | *** | ||||||
22509435-T-C | 20347549-T-C | DYZ19 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: IN24359 | 8727084 | 7103228 | 7047255 |
Kit: IN24359 | 14846143 | 9312180 | 8272054 |
Used in age calculations | 14846143 | 9312180 | 8272054 |
Counts of SNPs | 10 | 10 |
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