Barr
BigY2: AM12840MDKA Birth:
United States > New YorkTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 AM12840 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22234545-C-A hg38:Y:20072659-C-A | BY20168 | DYZ19 | A* | ||||
| hg19:Y:19719277-C-T hg38:Y:17607397-C-T | P5_Prx | A* | |||||
| hg19:Y:6177987-T-C hg38:Y:6309946-T-C | IR3_Dst | A* | |||||
| hg19:Y:19701125-C-T hg38:Y:17589245-C-T | P5_Prx | A* | |||||
| hg19:Y:20047016-C-T hg38:Y:17935136-C-T | P5_Prx | A* | |||||
| hg19:Y:20789088-G-A hg38:Y:18627202-G-A | P4_Prx | A* | |||||
| hg19:Y:22234462-G-T hg38:Y:20072576-G-T | DYZ19 | A* | |||||
| hg19:Y:22286138-G-T hg38:Y:20124252-G-T | DYZ19 | A* | |||||
| hg19:Y:22291573-G-T hg38:Y:20129687-G-T | DYZ19 | A* | |||||
| hg19:Y:6634585-T-A hg38:Y:6766544-T-A | BY152431 | Y | Y | + | |||
| hg19:Y:8364767-A-G hg38:Y:8496726-A-G | BY152894 | Y | Y | + | |||
| hg19:Y:8465848-C-A hg38:Y:8597807-C-A | BY156010 | Y | Y | + | |||
| hg19:Y:8737639-G-A hg38:Y:8869598-G-A | BY153020 | Y | Y | + | |||
| hg19:Y:8782712-G-A hg38:Y:8914671-G-A | BY153036 | Y | Y | + | |||
| hg19:Y:14026694-GA-G hg38:Y:11905988-GA-G | + | ||||||
| hg19:Y:14037859-C-T hg38:Y:11917153-C-T | BY153510 | Y | Y | + | |||
| hg19:Y:15097524-A-G hg38:Y:12985612-A-G | BY153805 | Y | Y | + | |||
| hg19:Y:15451930-C-T hg38:Y:13340050-C-T | BY153867 | Y | Y | + | |||
| hg19:Y:15536066-T-C hg38:Y:13424186-T-C | BY153895 | Y | Y | + | |||
| hg19:Y:15769928-A-G hg38:Y:13658048-A-G | BY153971 | Y | Y | + | |||
| hg19:Y:16760755-G-C hg38:Y:14648875-G-C | BY154204 | Y | Y | + | |||
| hg19:Y:16770264-C-G hg38:Y:14658384-C-G | BY154209 | Y | Y | + | |||
| hg19:Y:17050931-C-T hg38:Y:14939051-C-T | BY154282 | Y | Y | + | |||
| hg19:Y:17368116-A-G hg38:Y:15256236-A-G | Y | Y | + | ||||
| hg19:Y:18128319-A-G hg38:Y:16016439-A-G | BY154582 | Y | Y | + | |||
| hg19:Y:18653858-T-C hg38:Y:16541978-T-C | BY154684 | Y | Y | + | |||
| hg19:Y:18814132-T-C hg38:Y:16702252-T-C | BY154717 | Y | Y | + | |||
| hg19:Y:19033451-A-AT hg38:Y:16921571-A-AT | + | ||||||
| hg19:Y:21364005-C-A hg38:Y:19202119-C-A | BY155014 | Y | Y | + | |||
| hg19:Y:21397369-A-G hg38:Y:19235483-A-G | BY155019 | Y | Y | + | |||
| hg19:Y:22201275-T-C hg38:Y:20039389-T-C | BY155219 | Y | Y | + | |||
| hg19:Y:22442141-G-T hg38:Y:20280255-G-T | BY219059 | DYZ19 | + | ||||
| hg19:Y:22469692-G-T hg38:Y:20307806-G-T | FT459065 | DYZ19 | + | ||||
| hg19:Y:23163924-G-T hg38:Y:21002038-G-T | BY155541 | Y | + | ||||
| hg19:Y:23637772-G-A hg38:Y:21475886-G-A | BY146945 | Y | + | ||||
| hg19:Y:23732118-G-C hg38:Y:21570232-G-C | BY155674 | + | |||||
| hg19:Y:23762548-A-G hg38:Y:21600662-A-G | BY155686 | Y | + | ||||
| hg19:Y:24454728-C-T hg38:Y:22308581-C-T | BY155762 | Y | + | ||||
| hg19:Y:21073720-T-TAC hg38:Y:18911834-T-TAC | 11×AC | * | |||||
| hg19:Y:19261335-T-A hg38:Y:17149455-T-A | Z26671 | Y | Y | 8×GA | * | ||
| hg19:Y:22241337-G-T hg38:Y:20079451-G-T | DYZ19 | * | |||||
| hg19:Y:22302001-G-T hg38:Y:20140115-G-T | DYZ19 | * | |||||
| hg19:Y:13839780-G-A hg38:Y:11719074-G-A | DYZ17 | ** | |||||
| hg19:Y:13466351-CAA-C hg38:Y:11310675-CAA-C | ** | ||||||
| hg19:Y:22445706-C-T hg38:Y:20283820-C-T | BY197914 | DYZ19 | ** | ||||
| hg19:Y:16354394-G-GT hg38:Y:14242514-G-GT | 9×T | ** | |||||
| hg19:Y:24870878-T-G hg38:Y:22724731-T-G | IR1_R | ** | |||||
| hg19:Y:3951433-C-A hg38:Y:4083392-C-A | ** | ||||||
| hg19:Y:16278595-C-A hg38:Y:14166715-C-A | ** | ||||||
| hg38:Y:10751158-C-T | ** | ||||||
| hg38:Y:10661660-A-T | ** | ||||||
| hg38:Y:10926672-C-A | ** | ||||||
| hg38:Y:10994267-T-A | ** | ||||||
| hg19:Y:14735024-A-C hg38:Y:12623092-A-C | ** | ||||||
| hg38:Y:10807072-C-CCCCTG | ** | ||||||
| hg19:Y:18328815-C-A hg38:Y:16216935-C-A | P6_Prx | ** | |||||
| hg19:Y:20432868-AC-A hg38:Y:18270982-AC-A | P5_Dst | ** | |||||
| hg19:Y:3721332-C-A hg38:Y:3853291-C-A | ** | ||||||
| hg19:Y:5274384-C-A hg38:Y:5406343-C-A | ** | ||||||
| hg38:Y:10895893-T-C | ** | ||||||
| hg38:Y:10895895-G-C | ** | ||||||
| hg38:Y:10895901-A-C | ** | ||||||
| hg38:Y:10895902-G-A | ** | ||||||
| hg38:Y:10895908-C-A | ** | ||||||
| hg19:Y:14888137-C-A hg38:Y:12776203-C-A | ** | ||||||
| hg19:Y:15221712-A-AT hg38:Y:13109798-A-AT | 9×T | ** | |||||
| hg38:Y:10932884-T-G | ** | ||||||
| hg19:Y:14445235-G-T hg38:Y:12324508-G-T | ** | ||||||
| hg19:Y:18707189-C-A hg38:Y:16595309-C-A | ** | ||||||
| hg38:Y:10661654-C-T | ** | ||||||
| hg38:Y:10761139-A-T | ** | ||||||
| hg38:Y:10761152-C-T | ** | ||||||
| hg38:Y:10761162-C-G | ** | ||||||
| hg19:Y:18955857-T-TA hg38:Y:16843977-T-TA | 10×A | ** | |||||
| hg38:Y:10764552-C-A | ** | ||||||
| hg19:Y:22974297-C-A hg38:Y:20812411-C-A | ** | ||||||
| hg19:Y:18365608-T-A hg38:Y:16253728-T-A | P6_Prx | ** | |||||
| hg38:Y:10885077-C-A | ** | ||||||
| hg19:Y:22659402-C-A hg38:Y:20497516-C-A | ** | ||||||
| hg19:Y:14558033-T-G hg38:Y:12446234-T-G | ** | ||||||
| hg38:Y:56685626-T-A | ** | ||||||
| hg19:Y:28519082-C-A hg38:Y:26372935-C-A | ** | ||||||
| hg38:Y:10678687-T-C | ** | ||||||
| hg19:Y:16823945-C-A hg38:Y:14712065-C-A | ** | ||||||
| hg38:Y:10769824-G-T | FT430425 | ** | |||||
| hg38:Y:10938414-C-T | ** | ||||||
| hg38:Y:10984301-G-C | ** | ||||||
| hg38:Y:10841963-C-G | ** | ||||||
| hg38:Y:10841978-C-G | ** | ||||||
| hg38:Y:10841991-T-G | ** | ||||||
| hg19:Y:19187709-G-A hg38:Y:17075829-G-A | ** | ||||||
| hg19:Y:15683686-C-A hg38:Y:13571806-C-A | ** | ||||||
| hg19:Y:3285033-G-T hg38:Y:3416992-G-T | ** | ||||||
| hg38:Y:10747042-C-A | ** | ||||||
| hg38:Y:11018952-C-A | ** | ||||||
| hg38:Y:10785283-C-A | ** | ||||||
| hg19:Y:5675345-G-T hg38:Y:5807304-G-T | ** | ||||||
| hg38:Y:10969273-T-C | ** | ||||||
| hg38:Y:11014649-C-T | ** | ||||||
| hg38:Y:11014662-T-C | ** | ||||||
| hg38:Y:11014663-C-G | ** | ||||||
| hg19:Y:13253520-C-G hg38:Y:11097844-C-G | ** | ||||||
| hg38:Y:10847949-C-A | ** | ||||||
| hg38:Y:10678625-T-C | ** | ||||||
| hg19:Y:19187704-C-T hg38:Y:17075824-C-T | ** | ||||||
| hg19:Y:5458720-C-A hg38:Y:5590679-C-A | ** | ||||||
| hg19:Y:3994894-C-A hg38:Y:4126853-C-A | ** | ||||||
| hg19:Y:15469241-A-G hg38:Y:13357361-A-G | ** | ||||||
| hg38:Y:10763342-C-T | ** | ||||||
| hg38:Y:10801537-C-A | ** | ||||||
| hg38:Y:10789172-C-A | ** | ||||||
| hg38:Y:10683381-A-G | ** | ||||||
| hg38:Y:10868504-C-T | ** | ||||||
| hg19:Y:4326502-C-A hg38:Y:4458461-C-A | ** | ||||||
| hg19:Y:19261152-G-T hg38:Y:17149272-G-T | ** | ||||||
| hg19:Y:21389841-G-A hg38:Y:19227955-G-A | ** | ||||||
| hg19:Y:4871870-C-A hg38:Y:5003829-C-A | ** | ||||||
| hg38:Y:11006119-C-A | ** | ||||||
| hg19:Y:23259242-G-T hg38:Y:21097356-G-T | ** | ||||||
| hg19:Y:7777100-C-A hg38:Y:7909059-C-A | ** | ||||||
| hg38:Y:10932882-C-T | ** | ||||||
| hg19:Y:6593680-C-A hg38:Y:6725639-C-A | ** | ||||||
| hg38:Y:10763369-C-T | ** | ||||||
| hg19:Y:13217136-C-A hg38:Y:11061460-C-A | ** | ||||||
| hg38:Y:10935633-A-C | ** | ||||||
| hg38:Y:10764545-ATT-A | ** | ||||||
| hg19:Y:17572143-C-A hg38:Y:15460263-C-A | ** | ||||||
| hg19:Y:14270687-C-A hg38:Y:12149981-C-A | ** | ||||||
| hg38:Y:10763288-T-G | ** | ||||||
| hg19:Y:19258829-C-A hg38:Y:17146949-C-A | ** | ||||||
| hg38:Y:56841436-C-A | ** | ||||||
| hg19:Y:14504656-A-C hg38:Y:12392861-A-C | ** | ||||||
| hg19:Y:21905331-G-T hg38:Y:19743445-G-T | ** | ||||||
| hg19:Y:22809532-C-A hg38:Y:20647646-C-A | ** | ||||||
| hg19:Y:18871633-GAGAAAGAA-G hg38:Y:16759753-GAGAAAGAA-G | 8×AGAA | ** | |||||
| hg38:Y:10983070-A-C | BY172979 | FT48473 | ** | ||||
| hg19:Y:6920620-C-A hg38:Y:7052579-C-A | ** | ||||||
| hg19:Y:7714071-C-A hg38:Y:7846030-C-A | ** | ||||||
| hg19:Y:8100487-A-C hg38:Y:8232446-A-C | ** | ||||||
| hg19:Y:7155362-C-A hg38:Y:7287321-C-A | ** | ||||||
| hg19:Y:13217476-G-A hg38:Y:11061800-G-A | ** | ||||||
| hg38:Y:10950829-C-CTTTTATT | ** | ||||||
| hg19:Y:19261150-C-A hg38:Y:17149270-C-A | ** | ||||||
| hg38:Y:10763300-C-T | ** | ||||||
| hg19:Y:15450362-C-A hg38:Y:13338482-C-A | ** | ||||||
| hg38:Y:10892972-A-T | ** | ||||||
| hg38:Y:10785332-C-A | ** | ||||||
| hg19:Y:9424598-G-GAA hg38:Y:9586989-G-GAA | 16×A | ** | |||||
| hg19:Y:9952378-C-A hg38:Y:10114769-C-A | ** | ||||||
| hg19:Y:10033543-C-A hg38:Y:10195934-C-A | ** | ||||||
| hg19:Y:13545148-C-A hg38:Y:11389472-C-A | ** | ||||||
| hg38:Y:10781317-T-A | ** | ||||||
| hg38:Y:10671017-A-ATTTT | ** | ||||||
| hg19:Y:15623272-G-A hg38:Y:13511392-G-A | ** | ||||||
| hg38:Y:10950934-T-C | ** | ||||||
| hg19:Y:18654750-C-A hg38:Y:16542870-C-A | ** | ||||||
| hg19:Y:20104254-GGGGA-G hg38:Y:17992374-GGGGA-G | P5_Dst | ** | |||||
| hg38:Y:10938406-C-A | ** | ||||||
| hg38:Y:56873880-AT-A | ** | ||||||
| hg19:Y:7160552-G-T hg38:Y:7292511-G-T | ** | ||||||
| hg19:Y:16665753-C-A hg38:Y:14553873-C-A | ** | ||||||
| hg38:Y:10994703-C-A | ** | ||||||
| hg19:Y:16434650-C-A hg38:Y:14322770-C-A | ** | ||||||
| hg38:Y:10848183-G-T | ** | ||||||
| hg19:Y:23475505-G-T hg38:Y:21313619-G-T | ** | ||||||
| hg38:Y:10957882-C-A | ** | ||||||
| hg38:Y:10686412-C-A | ** | ||||||
| hg19:Y:8046360-C-A hg38:Y:8178319-C-A | ** | ||||||
| hg19:Y:27155002-T-G hg38:Y:25008855-T-G | P1_g3 | ** | |||||
| hg38:Y:11032514-C-A | ** | ||||||
| hg19:Y:15168481-C-A hg38:Y:13056567-C-A | ** | ||||||
| hg19:Y:22611935-C-T hg38:Y:20450049-C-T | ** | ||||||
| hg38:Y:11019348-C-A | ** | ||||||
| hg38:Y:10798245-C-CCATGT | ** | ||||||
| hg19:Y:15122431-C-A hg38:Y:13010518-C-A | ** | ||||||
| hg19:Y:23059536-C-A hg38:Y:20897650-C-A | ** | ||||||
| hg19:Y:7222627-C-A hg38:Y:7354586-C-A | ** | ||||||
| hg19:Y:6867549-C-A hg38:Y:6999508-C-A | ** | ||||||
| hg19:Y:9038166-C-A hg38:Y:9200557-C-A | ** | ||||||
| hg19:Y:2695543-T-C hg38:Y:2827502-T-C | ** | ||||||
| hg19:Y:2695591-A-G hg38:Y:2827550-A-G | ** | ||||||
| hg19:Y:2758215-A-G hg38:Y:2890174-A-G | ** | ||||||
| hg19:Y:2813741-G-T hg38:Y:2945700-G-T | ** | ||||||
| hg19:Y:2972810-T-A hg38:Y:3104769-T-A | ** | ||||||
| hg19:Y:3603327-C-A hg38:Y:3735286-C-A | ** | ||||||
| hg19:Y:3970584-C-A hg38:Y:4102543-C-A | ** | ||||||
| hg19:Y:4403068-C-A hg38:Y:4535027-C-A | ** | ||||||
| hg19:Y:4407224-G-T hg38:Y:4539183-G-T | ** | ||||||
| hg19:Y:4444508-A-T hg38:Y:4576467-A-T | ** | ||||||
| hg19:Y:4731403-G-A hg38:Y:4863362-G-A | ** | ||||||
| hg19:Y:5171397-T-C hg38:Y:5303356-T-C | ** | ||||||
| hg19:Y:5393362-C-T hg38:Y:5525321-C-T | 10×GGA | ** | |||||
| hg19:Y:5977047-T-G hg38:Y:6109006-T-G | ** | ||||||
| hg19:Y:6240876-T-A hg38:Y:6372835-T-A | IR3_Dst | ** | |||||
| hg19:Y:6347505-G-T hg38:Y:6479464-G-T | ** | ||||||
| hg19:Y:6427047-A-C hg38:Y:6559006-A-C | ** | ||||||
| hg19:Y:6593230-C-A hg38:Y:6725189-C-A | ** | ||||||
| hg19:Y:6666384-C-A hg38:Y:6798343-C-A | ** | ||||||
| hg19:Y:6675917-C-G hg38:Y:6807876-C-G | ** | ||||||
| hg19:Y:6892940-C-A hg38:Y:7024899-C-A | ** | ||||||
| hg19:Y:6922639-T-C hg38:Y:7054598-T-C | ** | ||||||
| hg19:Y:7093671-A-G hg38:Y:7225630-A-G | ** | ||||||
| hg19:Y:7107427-G-T hg38:Y:7239386-G-T | ** | ||||||
| hg19:Y:7179888-C-A hg38:Y:7311847-C-A | ** | ||||||
| hg19:Y:7380111-G-T hg38:Y:7512070-G-T | ** | ||||||
| hg19:Y:7434925-A-G hg38:Y:7566884-A-G | ** | ||||||
| hg19:Y:7867955-G-A hg38:Y:7999914-G-A | ** | ||||||
| hg19:Y:8069205-G-A hg38:Y:8201164-G-A | ** | ||||||
| hg19:Y:8095525-A-G hg38:Y:8227484-A-G | ** | ||||||
| hg19:Y:8261164-C-A hg38:Y:8393123-C-A | ** | ||||||
| hg19:Y:8694247-G-T hg38:Y:8826206-G-T | FT242327 | ** | |||||
| hg19:Y:8824088-C-A hg38:Y:8956047-C-A | ** | ||||||
| hg19:Y:9457230-A-G hg38:Y:9619621-A-G | ** | ||||||
| hg19:Y:9810877-A-G hg38:Y:9973268-A-G | ** | ||||||
| hg19:Y:9926794-G-T hg38:Y:10089185-G-T | ** | ||||||
| hg19:Y:10033928-G-A hg38:Y:10196319-G-A | ** | ||||||
| hg38:Y:10651911-T-A | ** | ||||||
| hg38:Y:10678680-T-C | ** | ||||||
| hg38:Y:10684305-C-A | ** | ||||||
| hg38:Y:10684441-C-A | ** | ||||||
| hg38:Y:10760329-C-G | ** | ||||||
| hg38:Y:10763310-C-T | ** | ||||||
| hg38:Y:10763326-T-TCCTCC | ** | ||||||
| hg38:Y:10763351-AC-A | ** | ||||||
| hg38:Y:10763374-C-G | ** | ||||||
| hg38:Y:10763396-T-C | ** | ||||||
| hg38:Y:10804921-AATCCTTTCC-A | ** | ||||||
| hg38:Y:10804945-A-G | ** | ||||||
| hg38:Y:10804951-T-A | ** | ||||||
| hg38:Y:10807178-C-A | ** | ||||||
| hg38:Y:10810660-C-G | ** | ||||||
| hg38:Y:10838494-C-A | ** | ||||||
| hg38:Y:10839052-T-G | ** | ||||||
| hg38:Y:10839072-T-G | ** | ||||||
| hg38:Y:10839079-G-GAAC | ** | ||||||
| hg38:Y:10886590-C-T | ** | ||||||
| hg38:Y:10894530-C-A | ** | ||||||
| hg38:Y:10909849-C-T | ** | ||||||
| hg38:Y:10932879-C-G | ** | ||||||
| hg38:Y:10984290-C-T | ** | ||||||
| hg38:Y:10984305-G-A | ** | ||||||
| hg38:Y:10984333-C-G | ** | ||||||
| hg38:Y:11021694-C-T | ** | ||||||
| hg38:Y:11037439-C-A | ** | ||||||
| hg19:Y:13199127-C-A hg38:Y:11043451-C-A | ** | ||||||
| hg19:Y:13233338-A-C hg38:Y:11077662-A-C | ** | ||||||
| hg19:Y:13253525-A-T hg38:Y:11097849-A-T | ** | ||||||
| hg19:Y:13398977-G-T hg38:Y:11243301-G-T | ** | ||||||
| hg19:Y:13556767-C-A hg38:Y:11401091-C-A | FT230131 | ** | |||||
| hg19:Y:13929764-G-A hg38:Y:11809058-G-A | ** | ||||||
| hg19:Y:13959193-C-A hg38:Y:11838487-C-A | ** | ||||||
| hg19:Y:13976436-C-A hg38:Y:11855730-C-A | ** | ||||||
| hg19:Y:14000242-G-A hg38:Y:11879536-G-A | ** | ||||||
| hg19:Y:14016346-GA-G hg38:Y:11895640-GA-G | ** | ||||||
| hg19:Y:14149527-G-C hg38:Y:12028821-G-C | ** | ||||||
| hg19:Y:14284589-G-T hg38:Y:12163883-G-T | ** | ||||||
| hg19:Y:14356210-A-T hg38:Y:12235505-A-T | ** | ||||||
| hg19:Y:14368002-G-A hg38:Y:12247298-G-A | ** | ||||||
| hg19:Y:14379084-T-A hg38:Y:12258380-T-A | ** | ||||||
| hg19:Y:14447120-C-A hg38:Y:12326393-C-A | ** | ||||||
| hg19:Y:14485327-T-C hg38:Y:12364596-T-C | ** | ||||||
| hg19:Y:14540846-G-T hg38:Y:12429047-G-T | ** | ||||||
| hg19:Y:14622089-T-C hg38:Y:12510287-T-C | ** | ||||||
| hg19:Y:14696911-A-G hg38:Y:12584977-A-G | ** | ||||||
| hg19:Y:14908259-G-T hg38:Y:12796326-G-T | ** | ||||||
| hg19:Y:14951457-C-A hg38:Y:12839531-C-A | ** | ||||||
| hg19:Y:14965451-C-T hg38:Y:12853526-C-T | ** | ||||||
| hg19:Y:15059869-A-T hg38:Y:12947961-A-T | ** | ||||||
| hg19:Y:15059879-T-A hg38:Y:12947971-T-A | ** | ||||||
| hg19:Y:15201522-T-G hg38:Y:13089608-T-G | ** | ||||||
| hg19:Y:15259165-G-A hg38:Y:13147249-G-A | ** | ||||||
| hg19:Y:15282560-C-A hg38:Y:13170659-C-A | ** | ||||||
| hg19:Y:15373390-T-G hg38:Y:13261510-T-G | ** | ||||||
| hg19:Y:15401967-C-A hg38:Y:13290087-C-A | ** | ||||||
| hg19:Y:15469240-G-T hg38:Y:13357360-G-T | ** | ||||||
| hg19:Y:15469248-T-A hg38:Y:13357368-T-A | ** | ||||||
| hg19:Y:15469251-T-G hg38:Y:13357371-T-G | ** | ||||||
| hg19:Y:15469259-TG-A hg38:Y:13357379-TG-A | ** | ||||||
| hg19:Y:15469268-T-TA hg38:Y:13357388-T-TA | ** | ||||||
| hg19:Y:15477744-AATTT-A hg38:Y:13365864-AATTT-A | 4×ATTT | ** | |||||
| hg19:Y:15485388-C-A hg38:Y:13373508-C-A | ** | ||||||
| hg19:Y:15608183-T-C hg38:Y:13496303-T-C | ** | ||||||
| hg19:Y:15611920-C-A hg38:Y:13500040-C-A | ** | ||||||
| hg19:Y:15775557-C-T hg38:Y:13663677-C-T | ** | ||||||
| hg19:Y:15916572-C-A hg38:Y:13804692-C-A | ** | ||||||
| hg19:Y:15926624-G-T hg38:Y:13814744-G-T | ** | ||||||
| hg19:Y:15971743-T-G hg38:Y:13859863-T-G | ** | ||||||
| hg19:Y:16045323-CA-C hg38:Y:13933443-CA-C | ** | ||||||
| hg19:Y:16056216-C-A hg38:Y:13944336-C-A | ** | ||||||
| hg19:Y:16186525-T-C hg38:Y:14074645-T-C | ** | ||||||
| hg19:Y:16223630-G-C hg38:Y:14111750-G-C | ** | ||||||
| hg19:Y:16308222-C-A hg38:Y:14196342-C-A | ** | ||||||
| hg19:Y:16319435-C-A hg38:Y:14207555-C-A | ** | ||||||
| hg19:Y:16549582-C-A hg38:Y:14437702-C-A | ** | ||||||
| hg19:Y:16694329-T-C hg38:Y:14582449-T-C | ** | ||||||
| hg19:Y:16757207-C-A hg38:Y:14645327-C-A | ** | ||||||
| hg19:Y:17097398-C-T hg38:Y:14985518-C-T | ** | ||||||
| hg19:Y:17235429-C-A hg38:Y:15123549-C-A | ** | ||||||
| hg19:Y:17365518-C-A hg38:Y:15253638-C-A | ** | ||||||
| hg19:Y:17387520-C-A hg38:Y:15275640-C-A | ** | ||||||
| hg19:Y:17425058-G-T hg38:Y:15313178-G-T | ** | ||||||
| hg19:Y:17668403-C-A hg38:Y:15556523-C-A | ** | ||||||
| hg19:Y:17951299-ATTTTTTTTTT-A hg38:Y:15839419-ATTTTTTTTTT-A | 25×T | ** | |||||
| hg19:Y:18042951-G-A hg38:Y:15931071-G-A | FTA17186 | ** | |||||
| hg19:Y:18050752-TCTCTGGTA-T hg38:Y:15938872-TCTCTGGTA-T | ** | ||||||
| hg19:Y:18085643-G-T hg38:Y:15973763-G-T | ** | ||||||
| hg19:Y:18086218-A-G hg38:Y:15974338-A-G | ** | ||||||
| hg19:Y:18384477-A-T hg38:Y:16272597-A-T | P6_Gap | ** | |||||
| hg19:Y:18528036-A-C hg38:Y:16416156-A-C | P6_Dst | ** | |||||
| hg19:Y:18615957-TTTG-T hg38:Y:16504077-TTTG-T | ** | ||||||
| hg19:Y:18648570-G-A hg38:Y:16536690-G-A | ** | ||||||
| hg19:Y:19411162-A-G hg38:Y:17299282-A-G | ** | ||||||
| hg19:Y:19475206-C-A hg38:Y:17363326-C-A | ** | ||||||
| hg19:Y:19557610-C-G hg38:Y:17445730-C-G | FT99586 | ** | |||||
| hg19:Y:20713316-A-C hg38:Y:18551430-A-C | P4_Prx | ** | |||||
| hg19:Y:21091374-C-A hg38:Y:18929488-C-A | ** | ||||||
| hg19:Y:21094117-A-C hg38:Y:18932231-A-C | FT99589 | ** | |||||
| hg19:Y:21095140-C-A hg38:Y:18933254-C-A | ** | ||||||
| hg19:Y:21268825-G-T hg38:Y:19106939-G-T | ** | ||||||
| hg19:Y:21360453-C-A hg38:Y:19198567-C-A | ** | ||||||
| hg19:Y:21455377-A-G hg38:Y:19293491-A-G | ** | ||||||
| hg19:Y:21648210-C-A hg38:Y:19486324-C-A | ** | ||||||
| hg19:Y:21895384-T-C hg38:Y:19733498-T-C | ** | ||||||
| hg19:Y:21963528-G-A hg38:Y:19801642-G-A | ** | ||||||
| hg19:Y:22041578-A-T hg38:Y:19879692-A-T | ** | ||||||
| hg19:Y:22125619-G-T hg38:Y:19963733-G-T | ** | ||||||
| hg19:Y:22203355-C-A hg38:Y:20041469-C-A | FT182402 | ** | |||||
| hg19:Y:22460876-T-G hg38:Y:20298990-T-G | DYZ19 | ** | |||||
| hg19:Y:22473989-G-T hg38:Y:20312103-G-T | DYZ19 | ** | |||||
| hg19:Y:22833876-A-AT hg38:Y:20671990-A-AT | ** | ||||||
| hg19:Y:22965319-A-G hg38:Y:20803433-A-G | ** | ||||||
| hg19:Y:22996070-AT-A hg38:Y:20834184-AT-A | ** | ||||||
| hg19:Y:23380459-A-G hg38:Y:21218573-A-G | ** | ||||||
| hg38:Y:21766276-C-CTATCATT | ** | ||||||
| hg19:Y:24492410-T-A hg38:Y:22346263-T-A | FT99737 | ** | |||||
| hg19:Y:24502381-G-T hg38:Y:22356234-G-T | ** | ||||||
| hg19:Y:24503074-G-A hg38:Y:22356927-G-A | ** | ||||||
| hg19:Y:25960806-A-T hg38:Y:23814659-A-T | P1_Y1 | ** | |||||
| hg19:Y:28478815-A-G hg38:Y:26332668-A-G | ** | ||||||
| hg19:Y:28590558-CT-C hg38:Y:26444411-CT-C | ** | ||||||
| hg19:Y:28600587-G-T hg38:Y:26454440-G-T | ** | ||||||
| hg19:Y:28627257-G-T hg38:Y:26481110-G-T | ** | ||||||
| hg19:Y:28649327-TGAAATCTAG-T hg38:Y:26503180-TGAAATCTAG-T | ** | ||||||
| hg38:Y:56879915-C-A | ** | ||||||
| hg19:Y:58981385-G-C hg38:Y:56835238-G-C | *** | ||||||
| hg19:Y:19267344-A-C hg38:Y:17155464-A-C | FGC201 | *** | |||||
| hg19:Y:13466356-G-C hg38:Y:11310680-G-C | *** | ||||||
| hg19:Y:17649352-T-TA hg38:Y:15537472-T-TA | 13×A | *** | |||||
| hg19:Y:13643042-A-C hg38:Y:11487366-A-C | *** | ||||||
| hg38:Y:10995786-A-C,T | *** | ||||||
| hg38:Y:56834592-G-T | *** | ||||||
| hg38:Y:10875775-C-T | *** | ||||||
| hg19:Y:13471935-G-T hg38:Y:11316259-G-T | *** | ||||||
| hg38:Y:10778956-C-A | *** | ||||||
| hg19:Y:21549183-GTT-G,GT hg38:Y:19387297-GTT-G,GT | 17×T | *** | |||||
| hg38:Y:10989446-A-C | *** | ||||||
| hg38:Y:10875780-C-T | *** | ||||||
| hg19:Y:24399930-C-A hg38:Y:22253783-C-A | *** | ||||||
| hg38:Y:10875770-C-T | *** | ||||||
| hg19:Y:23741963-G-T hg38:Y:21580077-G-T | *** | ||||||
| hg38:Y:10767668-C-A | *** | ||||||
| hg19:Y:2752725-CAA-C,CAAA hg38:Y:2884684-CAA-C,CAAA | 18×A | *** | |||||
| hg38:Y:10796678-A-C,G | *** | ||||||
| hg38:Y:10764506-T-TGCA | *** | ||||||
| hg38:Y:10764507-TCCA-T | *** | ||||||
| hg38:Y:10764553-T-TA | *** | ||||||
| hg38:Y:56838995-T-A | *** | ||||||
| hg38:Y:10677335-C-T | *** | ||||||
| hg38:Y:10677337-A-T | *** | ||||||
| hg38:Y:10677376-C-T | *** | ||||||
| hg19:Y:19557636-C-A hg38:Y:17445756-C-A | *** | ||||||
| hg19:Y:19486899-C-A hg38:Y:17375019-C-A | *** | ||||||
| hg19:Y:13215844-ATT-A,AT hg38:Y:11060168-ATT-A,AT | 16×T | *** | |||||
| hg38:Y:10787953-A-G,T | *** | ||||||
| hg19:Y:9509932-C-A hg38:Y:9672323-C-A | *** | ||||||
| hg38:Y:10785282-C-A | *** | ||||||
| hg19:Y:24876955-G-T hg38:Y:22730808-G-T | g1 | *** | |||||
| hg19:Y:19071673-C-A hg38:Y:16959793-C-A | *** | ||||||
| hg19:Y:18070191-CTTT-C hg38:Y:15958311-CTTT-C | 15×T | *** | |||||
| hg19:Y:17186726-TAAAAA-T,TAAAA hg38:Y:15074846-TAAAAA-T,TAAAA | 19×A | *** | |||||
| hg19:Y:22445719-A-C hg38:Y:20283833-A-C | BY185970 | DYZ19 | *** | ||||
| hg19:Y:13838431-G-A hg38:Y:11717725-G-A | BY91056 | DYZ17 | *** | ||||
| hg19:Y:23554902-C-A hg38:Y:21393016-C-A | *** | ||||||
| hg19:Y:8052756-C-A hg38:Y:8184715-C-A | *** | ||||||
| hg19:Y:14600563-C-A hg38:Y:12488763-C-A | *** | ||||||
| hg19:Y:8706769-C-A hg38:Y:8838728-C-A | *** | ||||||
| hg19:Y:23555979-C-A hg38:Y:21394093-C-A | *** | ||||||
| hg19:Y:21616430-C-A hg38:Y:19454544-C-A | *** | ||||||
| hg19:Y:8599992-GTTT-G hg38:Y:8731951-GTTT-G | 16×T | *** | |||||
| hg38:Y:10785290-T-A | *** | ||||||
| hg19:Y:17375326-G-T hg38:Y:15263446-G-T | *** | ||||||
| hg38:Y:10969866-C-A | *** | ||||||
| hg19:Y:19473873-C-A hg38:Y:17361993-C-A | *** | ||||||
| hg19:Y:15593000-C-A hg38:Y:13481120-C-A | *** | ||||||
| hg19:Y:2852366-G-T hg38:Y:2984325-G-T | *** | ||||||
| hg19:Y:2852370-A-G hg38:Y:2984329-A-G | *** | ||||||
| hg19:Y:2948637-TAC-T hg38:Y:3080596-TAC-T | *** | ||||||
| hg19:Y:5164477-C-A hg38:Y:5296436-C-A | *** | ||||||
| hg19:Y:7163387-T-C hg38:Y:7295346-T-C | *** | ||||||
| hg19:Y:7213469-G-T hg38:Y:7345428-G-T | *** | ||||||
| hg19:Y:7215823-C-A hg38:Y:7347782-C-A | *** | ||||||
| hg19:Y:7512542-G-T hg38:Y:7644501-G-T | *** | ||||||
| hg19:Y:7567904-C-A hg38:Y:7699863-C-A | *** | ||||||
| hg19:Y:7940362-T-C hg38:Y:8072321-T-C | *** | ||||||
| hg19:Y:8103042-G-A hg38:Y:8235001-G-A | *** | ||||||
| hg19:Y:8846520-C-A hg38:Y:8978479-C-A | *** | ||||||
| hg19:Y:9090974-C-A hg38:Y:9253365-C-A | *** | ||||||
| hg19:Y:9995081-C-A hg38:Y:10157472-C-A | *** | ||||||
| hg38:Y:10746999-G-A,C | *** | ||||||
| hg38:Y:10778957-A-T | *** | ||||||
| hg38:Y:10789325-C-A | *** | ||||||
| hg38:Y:10808630-CCACTG-C | *** | ||||||
| hg38:Y:10872047-G-T | *** | ||||||
| hg38:Y:10890225-C-A | *** | ||||||
| hg38:Y:10987146-CCACTCGACTA-C,CCACTCCACTAGATT | *** | ||||||
| hg19:Y:13471934-G-T hg38:Y:11316258-G-T | *** | ||||||
| hg19:Y:13922389-C-A hg38:Y:11801683-C-A | *** | ||||||
| hg19:Y:14251892-C-A hg38:Y:12131186-C-A | *** | ||||||
| hg19:Y:14330722-C-A hg38:Y:12210016-C-A | *** | ||||||
| hg19:Y:14586315-C-T hg38:Y:12474515-C-T | *** | ||||||
| hg19:Y:14716712-G-T hg38:Y:12604780-G-T | *** | ||||||
| hg19:Y:14810820-C-T hg38:Y:12698891-C-T | *** | ||||||
| hg19:Y:15668700-T-C hg38:Y:13556820-T-C | *** | ||||||
| hg19:Y:15979814-C-A hg38:Y:13867934-C-A | *** | ||||||
| hg19:Y:16086216-C-A hg38:Y:13974336-C-A | *** | ||||||
| hg19:Y:16286634-T-C hg38:Y:14174754-T-C | *** | ||||||
| hg19:Y:16758653-C-A hg38:Y:14646773-C-A | *** | ||||||
| hg19:Y:17010447-A-G hg38:Y:14898567-A-G | *** | ||||||
| hg19:Y:17294762-C-A hg38:Y:15182882-C-A | *** | ||||||
| hg19:Y:17295992-G-A hg38:Y:15184112-G-A | *** | ||||||
| hg19:Y:18606022-C-A hg38:Y:16494142-C-A | *** | ||||||
| hg19:Y:19395188-G-A hg38:Y:17283308-G-A | *** | ||||||
| hg19:Y:21168946-G-T hg38:Y:19007060-G-T | *** | ||||||
| hg19:Y:21265870-C-A hg38:Y:19103984-C-A | *** | ||||||
| hg19:Y:21408219-C-A hg38:Y:19246333-C-A | *** | ||||||
| hg19:Y:21518040-C-A hg38:Y:19356154-C-A | *** | ||||||
| hg19:Y:21604953-C-A hg38:Y:19443067-C-A | *** | ||||||
| hg19:Y:22445718-A-G hg38:Y:20283832-A-G | DYZ19 | *** | |||||
| hg19:Y:22552346-C-A hg38:Y:20390460-C-A | *** | ||||||
| hg19:Y:22788533-G-A hg38:Y:20626647-G-A | *** | ||||||
| hg19:Y:22868589-A-G hg38:Y:20706703-A-G | *** | ||||||
| hg19:Y:23041391-C-A hg38:Y:20879505-C-A | *** | ||||||
| hg19:Y:23432963-C-T hg38:Y:21271077-C-T | *** | ||||||
| hg19:Y:23498080-ATTTTT-A,ATTT hg38:Y:21336194-ATTTTT-A,ATTT | 19×T | *** | |||||
| hg19:Y:23510909-C-A hg38:Y:21349023-C-A | *** | ||||||
| hg38:Y:56836527-TCCTTCATTC-T,TCATTC | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: AM12840 | 8929154 | 7302039 | 7233401 |
| Used in age calculations | 8929154 | 7302039 | 7233401 |
| Counts of SNPs | 23 | 23 |
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