Zurbreugg
BigY2: 668159MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 668159 |
---|---|---|---|---|---|---|---|
hg19:Y:6111568-C-A hg38:Y:6243527-C-A | BY121456 | A* | |||||
hg19:Y:6182682-A-C hg38:Y:6314641-A-C | IR3_Dst | A* | |||||
hg19:Y:13687922-G-A hg38:Y:11532246-G-A | DYZ17 | A* | |||||
hg19:Y:19589296-G-A hg38:Y:17477416-G-A | P5_Prx | Y | A* | ||||
hg19:Y:22252818-G-A hg38:Y:20090932-G-A | DYZ19 | A* | |||||
hg19:Y:22282261-C-A hg38:Y:20120375-C-A | DYZ19 | A* | |||||
hg19:Y:2694799-T-C hg38:Y:2826758-T-C | FGC74218 | Y | Y | + | |||
hg19:Y:7658409-T-G hg38:Y:7790368-T-G | BY66609 | Y | Y | + | |||
hg19:Y:14125433-C-T hg38:Y:12004727-C-T | BY93177 | Y | Y | + | |||
hg19:Y:23335134-A-G hg38:Y:21173248-A-G | BY144668 | Y | Y | + | |||
hg19:Y:7105351-G-GA hg38:Y:7237310-G-GA | 11×A | * | |||||
hg19:Y:21491080-G-T hg38:Y:19329194-G-T | ** | ||||||
hg19:Y:13447147-CATTCCATTCT-C hg38:Y:11291471-CATTCCATTCT-C | ** | ||||||
hg19:Y:15202608-G-. hg38:Y:13090694-C-G | ** | ||||||
hg19:Y:19257108-A-AAT hg38:Y:17145228-A-AAT | 8×AT | ** | |||||
hg19:Y:7180076-C-T hg38:Y:7312035-C-T | CTS1064 | ** | |||||
hg19:Y:9865112-GTTTA-G hg38:Y:10027503-GTTTA-G | 4×TTTA | ** | |||||
hg19:Y:13966816-C-A hg38:Y:11846110-C-A | CTS1563 | ** | |||||
hg19:Y:15753197-T-C hg38:Y:13641317-T-C | M1975 | ** | |||||
hg19:Y:17213141-A-G hg38:Y:15101261-A-G | Y9895 Z9340 | ** | |||||
hg19:Y:23341994-G-T hg38:Y:21180108-G-T | ** | ||||||
hg19:Y:15557033-C-A hg38:Y:13445153-C-A | 18×A | ** | |||||
hg19:Y:7032630-GCTC-G hg38:Y:7164589-GCTC-G | 5×CTC | ** | |||||
hg19:Y:22103694-C-A hg38:Y:19941808-C-A | ** | ||||||
hg19:Y:22739716-C-A hg38:Y:20577830-C-A | 24×A | ** | |||||
hg19:Y:17895147-C-A hg38:Y:15783267-C-A | ** | ||||||
hg19:Y:22487739-G-T hg38:Y:20325853-G-T | DYZ19 | ** | |||||
hg19:Y:2649801-TCAAA-T hg38:Y:2781760-TCAAA-T | ** | ||||||
hg38:Y:10887380-T-C | ** | ||||||
hg38:Y:10887387-C-A | ** | ||||||
hg38:Y:10660824-C-G | ** | ||||||
hg38:Y:10887361-T-A | ** | ||||||
hg38:Y:10887370-T-C | ** | ||||||
hg38:Y:10938344-T-C | ** | ||||||
hg19:Y:15982155-C-A hg38:Y:13870275-C-A | M12382 | ** | |||||
hg19:Y:15268780-C-A hg38:Y:13156869-C-A | ** | ||||||
hg38:Y:10653946-C-A | ** | ||||||
hg38:Y:10952474-C-G | ** | ||||||
hg38:Y:10512423-GT-G | ** | ||||||
hg38:Y:10660806-A-AC | ** | ||||||
hg38:Y:10660808-TCCATCCCAGTC-T | ** | ||||||
hg19:Y:23044082-C-A hg38:Y:20882196-C-A | ** | ||||||
hg38:Y:56843369-C-A | ** | ||||||
hg38:Y:56843378-G-T | ** | ||||||
hg38:Y:56843380-A-T | ** | ||||||
hg38:Y:56843380-A-ATG | ** | ||||||
hg38:Y:56843385-C-G | ** | ||||||
hg38:Y:56843387-C-A | ** | ||||||
hg38:Y:56843392-C-T | ** | ||||||
hg38:Y:56843400-T-C | ** | ||||||
hg38:Y:56843413-A-C | ** | ||||||
hg38:Y:56843438-T-G | ** | ||||||
hg38:Y:10676848-A-C | ** | ||||||
hg38:Y:11022106-C-A | ** | ||||||
hg38:Y:11022138-T-A | ** | ||||||
hg19:Y:13487686-C-T hg38:Y:11332010-C-T | ** | ||||||
hg19:Y:13487689-G-A hg38:Y:11332013-G-A | ** | ||||||
hg19:Y:13487711-C-A hg38:Y:11332035-C-A | ** | ||||||
hg19:Y:23442795-C-A hg38:Y:21280909-C-A | ** | ||||||
hg38:Y:10958390-A-T | ** | ||||||
hg19:Y:14412896-C-A hg38:Y:12292193-C-A | ** | ||||||
hg38:Y:10987118-CCTAA-C | ** | ||||||
hg38:Y:10676856-A-C | ** | ||||||
hg38:Y:10967449-G-T | FT438483 | ** | |||||
hg19:Y:7154615-A-G hg38:Y:7286574-A-G | ** | ||||||
hg19:Y:18219223-CA-C hg38:Y:16107343-CA-C | 8×A | ** | |||||
hg19:Y:17517225-C-A hg38:Y:15405345-C-A | ** | ||||||
hg38:Y:11027073-C-G | ** | ||||||
hg38:Y:10796451-C-A | ** | ||||||
hg38:Y:10997716-T-TTCTCA | ** | ||||||
hg19:Y:13460415-T-A hg38:Y:11304739-T-A | ** | ||||||
hg19:Y:20712287-TACAC-T hg38:Y:18550401-TACAC-T | P4_Prx | 16×AC | ** | ||||
hg19:Y:9493596-C-A hg38:Y:9655987-C-A | ** | ||||||
hg38:Y:11031660-C-A | ** | ||||||
hg19:Y:28818397-A-G hg38:Y:26672250-A-G | ** | ||||||
hg19:Y:18959212-C-A hg38:Y:16847332-C-A | ** | ||||||
hg38:Y:10922187-C-A | ** | ||||||
hg19:Y:14522195-C-A hg38:Y:12410396-C-A | ** | ||||||
hg19:Y:4049223-C-A hg38:Y:4181182-C-A | ** | ||||||
hg38:Y:10673734-A-C | ** | ||||||
hg19:Y:23450626-C-A hg38:Y:21288740-C-A | ** | ||||||
hg19:Y:13936477-C-A hg38:Y:11815771-C-A | ** | ||||||
hg19:Y:15489854-C-A hg38:Y:13377974-C-A | ** | ||||||
hg38:Y:10669519-C-CATTG | ** | ||||||
hg19:Y:15868048-C-A hg38:Y:13756168-C-A | ** | ||||||
hg19:Y:9068890-G-T hg38:Y:9231281-G-T | ** | ||||||
hg19:Y:14926239-G-A hg38:Y:12814304-G-A | ** | ||||||
hg38:Y:10937674-C-A | ** | ||||||
hg19:Y:15652938-G-A hg38:Y:13541058-G-A | ** | ||||||
hg19:Y:16107405-G-T hg38:Y:13995525-G-T | P8_Prx | ** | |||||
hg38:Y:10773306-C-A | ** | ||||||
hg19:Y:7078547-C-A hg38:Y:7210506-C-A | ** | ||||||
hg38:Y:10847106-T-G | ** | ||||||
hg38:Y:10922202-T-C | FT436649 | ** | |||||
hg19:Y:22655011-C-A hg38:Y:20493125-C-A | ** | ||||||
hg19:Y:8140525-C-A hg38:Y:8272484-C-A | ** | ||||||
hg19:Y:14463554-C-A hg38:Y:12342827-C-A | ** | ||||||
hg19:Y:20832480-C-A hg38:Y:18670594-C-A | P4_Gap | ** | |||||
hg38:Y:11034735-A-AC | ** | ||||||
hg38:Y:11034738-CA-C | ** | ||||||
hg38:Y:10676831-C-T | ** | ||||||
hg38:Y:10676865-C-A | ** | ||||||
hg19:Y:9034421-C-A hg38:Y:9196812-C-A | ** | ||||||
hg38:Y:10938386-C-A | ** | ||||||
hg19:Y:13941593-C-A hg38:Y:11820887-C-A | ** | ||||||
hg38:Y:11034699-C-T | ** | ||||||
hg38:Y:10942969-C-T | ** | ||||||
hg19:Y:23596982-T-C hg38:Y:21435096-T-C | Y111995 | ** | |||||
hg19:Y:23596983-G-A hg38:Y:21435097-G-A | ** | ||||||
hg38:Y:10934655-T-C | ** | ||||||
hg38:Y:11034723-C-G | ** | ||||||
hg38:Y:10916279-A-G | ** | ||||||
hg38:Y:10922144-A-T | ** | ||||||
hg38:Y:10922155-C-CT | ** | ||||||
hg38:Y:10922157-T-TACTG | ** | ||||||
hg38:Y:10922169-A-C | ** | ||||||
hg19:Y:15735286-C-A hg38:Y:13623406-C-A | ** | ||||||
hg19:Y:2685619-A-T hg38:Y:2817578-A-T | ** | ||||||
hg19:Y:20557658-TGC-A hg38:Y:18395772-TGC-A | P5_Dst | ** | |||||
hg19:Y:18709773-C-A hg38:Y:16597893-C-A | ** | ||||||
hg38:Y:10986406-C-T | ** | ||||||
hg38:Y:10889767-T-C | ** | ||||||
hg38:Y:11672448-C-A | DYZ17 | ** | |||||
hg19:Y:14990185-T-G hg38:Y:12878270-T-G | ** | ||||||
hg38:Y:10758308-C-A | ** | ||||||
hg19:Y:16305914-G-T hg38:Y:14194034-G-T | ** | ||||||
hg38:Y:11034704-C-T | ** | ||||||
hg38:Y:10987133-T-A | ** | ||||||
hg38:Y:10653979-T-C | ** | ||||||
hg19:Y:2840098-TC-T hg38:Y:2972057-TC-T | ** | ||||||
hg38:Y:10825661-C-A | ** | ||||||
hg19:Y:5426409-A-AT hg38:Y:5558368-A-AT | ** | ||||||
hg19:Y:22092753-T-C hg38:Y:19930867-T-C | ** | ||||||
hg19:Y:16005177-C-A hg38:Y:13893297-C-A | ** | ||||||
hg19:Y:17004618-C-A hg38:Y:14892738-C-A | 14×A | ** | |||||
hg19:Y:18720300-C-A hg38:Y:16608420-C-A | ** | ||||||
hg38:Y:10922195-C-G | ** | ||||||
hg19:Y:7234991-C-T hg38:Y:7366950-C-T | ** | ||||||
hg19:Y:17374504-A-G hg38:Y:15262624-A-G | ** | ||||||
hg19:Y:9980001-C-A hg38:Y:10142392-C-A | ** | ||||||
hg19:Y:15412886-C-A hg38:Y:13301006-C-A | ** | ||||||
hg19:Y:3790752-C-A hg38:Y:3922711-C-A | ** | ||||||
hg19:Y:18462526-G-T hg38:Y:16350646-G-T | P6_Dst | ** | |||||
hg19:Y:6878898-C-A hg38:Y:7010857-C-A | ** | ||||||
hg19:Y:6653993-C-A hg38:Y:6785952-C-A | ** | ||||||
hg19:Y:22798020-G-T hg38:Y:20636134-G-T | ** | ||||||
hg19:Y:15850942-C-A hg38:Y:13739062-C-A | ** | ||||||
hg19:Y:17100437-G-A hg38:Y:14988557-G-A | ** | ||||||
hg19:Y:7758152-C-A hg38:Y:7890111-C-A | ** | ||||||
hg19:Y:16765596-A-AT hg38:Y:14653716-A-AT | ** | ||||||
hg19:Y:8498338-C-A hg38:Y:8630297-C-A | 16×A | ** | |||||
hg38:Y:10986423-C-G | ** | ||||||
hg19:Y:23045833-C-A hg38:Y:20883947-C-A | ** | ||||||
hg38:Y:10929606-G-C | ** | ||||||
hg19:Y:18629980-C-A hg38:Y:16518100-C-A | ** | ||||||
hg19:Y:5851370-C-A hg38:Y:5983329-C-A | ** | ||||||
hg19:Y:19155028-C-T hg38:Y:17043148-C-T | ** | ||||||
hg19:Y:16412325-C-A hg38:Y:14300445-C-A | ** | ||||||
hg19:Y:21946903-C-A hg38:Y:19785017-C-A | ** | ||||||
hg19:Y:7154596-A-G hg38:Y:7286555-A-G | ** | ||||||
hg19:Y:14418896-C-A hg38:Y:12298171-C-A | ** | ||||||
hg19:Y:14826539-G-T hg38:Y:12714606-G-T | ** | ||||||
hg19:Y:2685623-C-A hg38:Y:2817582-C-A | ** | ||||||
hg19:Y:5818016-C-A hg38:Y:5949975-C-A | ** | ||||||
hg38:Y:56847859-T-A | ** | ||||||
hg38:Y:56847863-G-T | ** | ||||||
hg38:Y:56847875-C-G | ** | ||||||
hg38:Y:56847884-A-T | ** | ||||||
hg38:Y:10825663-A-T | ** | ||||||
hg38:Y:10986364-C-T | ** | ||||||
hg19:Y:7224871-C-A hg38:Y:7356830-C-A | ** | ||||||
hg19:Y:14862021-A-ATT hg38:Y:12750087-A-ATT | 12×T | ** | |||||
hg19:Y:22974183-C-A hg38:Y:20812297-C-A | ** | ||||||
hg19:Y:15569696-C-A hg38:Y:13457816-C-A | ** | ||||||
hg19:Y:14406718-C-A hg38:Y:12286016-C-A | ** | ||||||
hg38:Y:10889769-C-CA | ** | ||||||
hg38:Y:10889770-C-CTTTA | ** | ||||||
hg19:Y:3286207-C-A hg38:Y:3418166-C-A | ** | ||||||
hg38:Y:10653962-C-T | ** | ||||||
hg38:Y:10653969-C-A | ** | ||||||
hg38:Y:10653974-C-T | ** | ||||||
hg38:Y:11011568-G-T | ** | ||||||
hg19:Y:23790430-C-A hg38:Y:21628544-C-A | ** | ||||||
hg19:Y:22886019-C-A hg38:Y:20724133-C-A | ** | ||||||
hg19:Y:21121456-C-A hg38:Y:18959570-C-A | ** | ||||||
hg38:Y:10668399-C-A | ** | ||||||
hg19:Y:22092751-T-C hg38:Y:19930865-T-C | ** | ||||||
hg19:Y:22092752-G-T hg38:Y:19930866-G-T | ** | ||||||
hg19:Y:8376392-C-A hg38:Y:8508351-C-A | ** | ||||||
hg19:Y:2979216-C-A hg38:Y:3111175-C-A | ** | ||||||
hg38:Y:10876052-G-T | ** | ||||||
hg19:Y:21855927-C-T hg38:Y:19694041-C-T | BY135939 | ** | |||||
hg19:Y:14573098-A-C hg38:Y:12461298-A-C | ** | ||||||
hg38:Y:10992235-C-A | ** | ||||||
hg19:Y:4968406-C-A hg38:Y:5100365-C-A | ** | ||||||
hg19:Y:9830604-C-A hg38:Y:9992995-C-A | ** | ||||||
hg19:Y:14474616-T-G hg38:Y:12353885-T-G | ** | ||||||
hg19:Y:8732130-G-T hg38:Y:8864089-G-T | ** | ||||||
hg19:Y:15616549-C-A hg38:Y:13504669-C-A | ** | ||||||
hg38:Y:10938381-C-A | ** | ||||||
hg19:Y:13296184-GTTT-G hg38:Y:11140508-GTTT-G | 14×T | ** | |||||
hg19:Y:8704402-C-A hg38:Y:8836361-C-A | ** | ||||||
hg19:Y:14351269-C-A hg38:Y:12230564-C-A | ** | ||||||
hg19:Y:17486400-C-A hg38:Y:15374520-C-A | ** | ||||||
hg38:Y:56842093-T-A | ** | ||||||
hg19:Y:26544580-C-A hg38:Y:24398433-C-A | P1_g2 | ** | |||||
hg19:Y:17014324-AT-A hg38:Y:14902444-AT-A | ** | ||||||
hg19:Y:17385553-C-A hg38:Y:15273673-C-A | ** | ||||||
hg19:Y:9943463-C-A hg38:Y:10105854-C-A | ** | ||||||
hg19:Y:7020221-C-A hg38:Y:7152180-C-A | ** | ||||||
hg19:Y:16553069-A-AT hg38:Y:14441189-A-AT | 8×T | ** | |||||
hg19:Y:21698478-C-A hg38:Y:19536592-C-A | ** | ||||||
hg19:Y:14926257-A-T hg38:Y:12814322-A-T | ** | ||||||
hg38:Y:10686711-C-A | ** | ||||||
hg38:Y:11005430-C-T | FT268405 | ** | |||||
hg19:Y:8661559-C-A hg38:Y:8793518-C-A | ** | ||||||
hg19:Y:19253000-G-T hg38:Y:17141120-G-T | ** | ||||||
hg19:Y:9456014-C-A hg38:Y:9618405-C-A | ** | ||||||
hg19:Y:14085892-C-A hg38:Y:11965186-C-A | ** | ||||||
hg19:Y:23386418-C-A hg38:Y:21224532-C-A | ** | ||||||
hg38:Y:10877790-T-TTAAAC | ** | ||||||
hg19:Y:21153152-C-A hg38:Y:18991266-C-A | ** | ||||||
hg38:Y:10919393-C-A | ** | ||||||
hg19:Y:7295820-C-A hg38:Y:7427779-C-A | ** | ||||||
hg19:Y:14200459-C-A hg38:Y:12079753-C-A | ** | ||||||
hg19:Y:16763900-C-A hg38:Y:14652020-C-A | ** | ||||||
hg38:Y:11005438-C-A | ** | ||||||
hg19:Y:13707093-G-T hg38:Y:11551417-G-T | DYZ17 | ** | |||||
hg19:Y:16623667-G-T hg38:Y:14511787-G-T | ** | ||||||
hg19:Y:7132129-C-A hg38:Y:7264088-C-A | ** | ||||||
hg19:Y:2660566-C-A hg38:Y:2792525-C-A | ** | ||||||
hg19:Y:2695620-C-A hg38:Y:2827579-C-A | ** | ||||||
hg19:Y:2840080-G-T hg38:Y:2972039-G-T | ** | ||||||
hg19:Y:2840088-G-T hg38:Y:2972047-G-T | ** | ||||||
hg19:Y:2845127-C-A hg38:Y:2977086-C-A | ** | ||||||
hg19:Y:2845221-CAAAAAAAAAAAAA-C hg38:Y:2977180-CAAAAAAAAAAAAA-C | 38×A | ** | |||||
hg19:Y:3099227-G-T hg38:Y:3231186-G-T | ** | ||||||
hg19:Y:3131297-G-T hg38:Y:3263256-G-T | ** | ||||||
hg19:Y:3271711-T-A hg38:Y:3403670-T-A | ** | ||||||
hg19:Y:3334203-G-T hg38:Y:3466162-G-T | ** | ||||||
hg19:Y:3346882-C-A hg38:Y:3478841-C-A | ** | ||||||
hg19:Y:3566843-G-T hg38:Y:3698802-G-T | ** | ||||||
hg19:Y:3657881-G-T hg38:Y:3789840-G-T | FT381888 | ** | |||||
hg19:Y:3834653-G-T hg38:Y:3966612-G-T | ** | ||||||
hg19:Y:4201482-C-A hg38:Y:4333441-C-A | ** | ||||||
hg19:Y:4740670-C-A hg38:Y:4872629-C-A | ** | ||||||
hg19:Y:4900914-G-T hg38:Y:5032873-G-T | ** | ||||||
hg19:Y:5017850-G-T hg38:Y:5149809-G-T | ** | ||||||
hg19:Y:5050947-C-A hg38:Y:5182906-C-A | ** | ||||||
hg19:Y:5107745-C-A hg38:Y:5239704-C-A | ** | ||||||
hg19:Y:5263404-C-A hg38:Y:5395363-C-A | ** | ||||||
hg19:Y:5824282-C-A hg38:Y:5956241-C-A | ** | ||||||
hg19:Y:5851449-C-A hg38:Y:5983408-C-A | ** | ||||||
hg19:Y:6637040-T-C hg38:Y:6768999-T-C | ** | ||||||
hg19:Y:6775379-C-A hg38:Y:6907338-C-A | ** | ||||||
hg19:Y:6949352-C-A hg38:Y:7081311-C-A | ** | ||||||
hg19:Y:6975825-C-A hg38:Y:7107784-C-A | ** | ||||||
hg19:Y:7090200-C-A hg38:Y:7222159-C-A | ** | ||||||
hg19:Y:7154593-T-C hg38:Y:7286552-T-C | ** | ||||||
hg19:Y:7154594-G-C hg38:Y:7286553-G-C | ** | ||||||
hg19:Y:7154608-T-C hg38:Y:7286567-T-C | ** | ||||||
hg19:Y:7365588-A-C hg38:Y:7497547-A-C | ** | ||||||
hg19:Y:7434868-C-A hg38:Y:7566827-C-A | ** | ||||||
hg19:Y:7655179-A-G hg38:Y:7787138-A-G | ** | ||||||
hg19:Y:7832315-C-A hg38:Y:7964274-C-A | ** | ||||||
hg19:Y:8092652-G-T hg38:Y:8224611-G-T | ** | ||||||
hg19:Y:8125311-C-A hg38:Y:8257270-C-A | ** | ||||||
hg19:Y:8216549-C-A hg38:Y:8348508-C-A | ** | ||||||
hg19:Y:8376388-C-A hg38:Y:8508347-C-A | ** | ||||||
hg19:Y:8666148-C-A hg38:Y:8798107-C-A | ** | ||||||
hg19:Y:8807245-C-A hg38:Y:8939204-C-A | ** | ||||||
hg19:Y:8975821-C-A hg38:Y:9138212-C-A | FT53282 | ** | |||||
hg19:Y:9068974-G-T hg38:Y:9231365-G-T | ** | ||||||
hg19:Y:9849826-A-G hg38:Y:10012217-A-G | ** | ||||||
hg19:Y:9849833-T-C hg38:Y:10012224-T-C | ** | ||||||
hg19:Y:9849841-G-A hg38:Y:10012232-G-A | ** | ||||||
hg19:Y:9964966-T-G hg38:Y:10127357-T-G | ** | ||||||
hg19:Y:10031085-G-T hg38:Y:10193476-G-T | ** | ||||||
hg38:Y:10651892-T-C | ** | ||||||
hg38:Y:10653912-T-A | ** | ||||||
hg38:Y:10664140-A-T | FT56433 | ** | |||||
hg38:Y:10666788-C-A | ** | ||||||
hg38:Y:10676860-C-A | ** | ||||||
hg38:Y:10767624-T-G | ** | ||||||
hg38:Y:10767632-A-C | ** | ||||||
hg38:Y:10787620-T-C | ** | ||||||
hg38:Y:10793538-A-C | ** | ||||||
hg38:Y:10800093-C-A | ** | ||||||
hg38:Y:10806570-C-A | ** | ||||||
hg38:Y:10825295-C-GGATAA | ** | ||||||
hg38:Y:10851947-C-A | ** | ||||||
hg38:Y:10898909-C-A | ** | ||||||
hg38:Y:10899253-C-A | ** | ||||||
hg38:Y:10916264-G-A | ** | ||||||
hg38:Y:10929607-C-T | FT376979 | ** | |||||
hg38:Y:10938332-CTTTCC-T | ** | ||||||
hg38:Y:10938391-C-A | ** | ||||||
hg38:Y:10940968-C-A | ** | ||||||
hg38:Y:10944624-C-A | ** | ||||||
hg38:Y:10947791-C-A | ** | ||||||
hg38:Y:10958793-T-G | ** | ||||||
hg38:Y:10959501-T-C | ** | ||||||
hg38:Y:10959511-C-T | ** | ||||||
hg38:Y:10978283-C-A | ** | ||||||
hg38:Y:10983028-G-T | ** | ||||||
hg38:Y:10986408-G-T | ** | ||||||
hg19:Y:13193962-T-C hg38:Y:11038286-T-C | ** | ||||||
hg19:Y:13227806-T-G hg38:Y:11072130-T-G | ** | ||||||
hg19:Y:13707112-G-A hg38:Y:11551436-G-A | DYZ17 | ** | |||||
hg38:Y:11646352-C-A | DYZ17 | ** | |||||
hg38:Y:11648079-T-A | DYZ17 | ** | |||||
hg19:Y:14018127-G-T hg38:Y:11897421-G-T | ** | ||||||
hg19:Y:14100354-C-G hg38:Y:11979648-C-G | ** | ||||||
hg19:Y:14124245-C-A hg38:Y:12003539-C-A | ** | ||||||
hg19:Y:14254594-C-A hg38:Y:12133888-C-A | FT179897 | ** | |||||
hg19:Y:14364225-G-T hg38:Y:12243520-G-T | ** | ||||||
hg19:Y:14379419-G-T hg38:Y:12258715-G-T | ** | ||||||
hg19:Y:14401829-G-T hg38:Y:12281126-G-T | ** | ||||||
hg19:Y:14425681-A-C hg38:Y:12304956-A-C | ** | ||||||
hg19:Y:14451146-C-A hg38:Y:12330419-C-A | ** | ||||||
hg19:Y:14503886-C-A hg38:Y:12392091-C-A | ** | ||||||
hg19:Y:14553212-C-A hg38:Y:12441413-C-A | ** | ||||||
hg19:Y:14582457-C-A hg38:Y:12470657-C-A | ** | ||||||
hg19:Y:14743170-A-G hg38:Y:12631238-A-G | FT311931 | ** | |||||
hg19:Y:14749184-C-A hg38:Y:12637253-C-A | ** | ||||||
hg19:Y:14815243-T-C hg38:Y:12703314-T-C | ** | ||||||
hg19:Y:14816161-T-C hg38:Y:12704232-T-C | ** | ||||||
hg19:Y:14842497-T-C hg38:Y:12730563-T-C | ** | ||||||
hg19:Y:14926245-C-CTT hg38:Y:12814310-C-CTT | ** | ||||||
hg19:Y:14926250-T-C hg38:Y:12814315-T-C | ** | ||||||
hg19:Y:15047491-T-G hg38:Y:12935582-T-G | ** | ||||||
hg19:Y:15176188-G-A hg38:Y:13064274-G-A | ** | ||||||
hg19:Y:15278983-T-A hg38:Y:13167082-T-A | ** | ||||||
hg19:Y:15368766-T-G hg38:Y:13256886-T-G | ** | ||||||
hg19:Y:15580010-A-G hg38:Y:13468130-A-G | ** | ||||||
hg19:Y:15652932-T-C hg38:Y:13541052-T-C | ** | ||||||
hg19:Y:15652939-G-A hg38:Y:13541059-G-A | FGC52912 | ** | |||||
hg19:Y:15677326-G-T hg38:Y:13565446-G-T | ** | ||||||
hg19:Y:15677832-T-G hg38:Y:13565952-T-G | ** | ||||||
hg19:Y:15755219-C-A hg38:Y:13643339-C-A | ** | ||||||
hg19:Y:15756366-T-G hg38:Y:13644486-T-G | ** | ||||||
hg19:Y:15832091-C-A hg38:Y:13720211-C-A | ** | ||||||
hg19:Y:15888465-C-A hg38:Y:13776585-C-A | ** | ||||||
hg19:Y:15921612-C-G hg38:Y:13809732-C-G | ** | ||||||
hg19:Y:15921640-T-G hg38:Y:13809760-T-G | ** | ||||||
hg19:Y:16006714-G-T hg38:Y:13894834-G-T | ** | ||||||
hg19:Y:16050988-C-G hg38:Y:13939108-C-G | ** | ||||||
hg19:Y:16107425-G-T hg38:Y:13995545-G-T | P8_Prx | ** | |||||
hg19:Y:16422763-T-C hg38:Y:14310883-T-C | FT73853 | ** | |||||
hg19:Y:16465854-C-A hg38:Y:14353974-C-A | ** | ||||||
hg19:Y:16508634-T-C hg38:Y:14396754-T-C | ** | ||||||
hg19:Y:16712882-C-A hg38:Y:14601002-C-A | ** | ||||||
hg19:Y:16760912-T-G hg38:Y:14649032-T-G | ** | ||||||
hg19:Y:16932768-C-A hg38:Y:14820888-C-A | ** | ||||||
hg19:Y:17056792-G-T hg38:Y:14944912-G-T | ** | ||||||
hg19:Y:17073068-C-A hg38:Y:14961188-C-A | ** | ||||||
hg19:Y:17152051-C-A hg38:Y:15040171-C-A | ** | ||||||
hg19:Y:17327449-C-A hg38:Y:15215569-C-A | ** | ||||||
hg19:Y:17327459-C-A hg38:Y:15215579-C-A | ** | ||||||
hg19:Y:17352435-C-A hg38:Y:15240555-C-A | ** | ||||||
hg19:Y:17854322-C-A hg38:Y:15742442-C-A | ** | ||||||
hg19:Y:17864083-G-T hg38:Y:15752203-G-T | ** | ||||||
hg19:Y:17936850-C-A hg38:Y:15824970-C-A | ** | ||||||
hg19:Y:18050093-T-C hg38:Y:15938213-T-C | ** | ||||||
hg19:Y:18136761-C-A hg38:Y:16024881-C-A | ** | ||||||
hg19:Y:18154540-C-T hg38:Y:16042660-C-T | ** | ||||||
hg19:Y:18253540-C-T hg38:Y:16141660-C-T | ** | ||||||
hg19:Y:18385216-C-A hg38:Y:16273336-C-A | P6_Gap | ** | |||||
hg19:Y:18607671-G-T hg38:Y:16495791-G-T | ** | ||||||
hg19:Y:18692589-C-A hg38:Y:16580709-C-A | ** | ||||||
hg19:Y:18959162-C-A hg38:Y:16847282-C-A | ** | ||||||
hg19:Y:18980953-G-T hg38:Y:16869073-G-T | ** | ||||||
hg19:Y:18988853-G-T hg38:Y:16876973-G-T | ** | ||||||
hg19:Y:18997369-T-A hg38:Y:16885489-T-A | ** | ||||||
hg19:Y:18997374-C-T hg38:Y:16885494-C-T | ** | ||||||
hg19:Y:19008223-G-T hg38:Y:16896343-G-T | ** | ||||||
hg19:Y:19091479-G-A hg38:Y:16979599-G-A | ** | ||||||
hg19:Y:19091482-C-T hg38:Y:16979602-C-T | ** | ||||||
hg19:Y:19091491-T-C hg38:Y:16979611-T-C | ** | ||||||
hg19:Y:19161977-C-A hg38:Y:17050097-C-A | ** | ||||||
hg19:Y:19322220-C-A hg38:Y:17210340-C-A | ** | ||||||
hg19:Y:19367359-C-A hg38:Y:17255479-C-A | ** | ||||||
hg19:Y:19418559-A-G hg38:Y:17306679-A-G | ** | ||||||
hg19:Y:19461925-A-C hg38:Y:17350045-A-C | ** | ||||||
hg19:Y:19547738-A-G hg38:Y:17435858-A-G | ** | ||||||
hg19:Y:19791428-C-A hg38:Y:17679548-C-A | P5_Prx | ** | |||||
hg19:Y:19963624-C-A hg38:Y:17851744-C-A | P5_Prx | ** | |||||
hg19:Y:20696017-C-A hg38:Y:18534131-C-A | P4_Prx | ** | |||||
hg19:Y:20989177-AT-A hg38:Y:18827291-AT-A | P4_Dst | ** | |||||
hg19:Y:20989258-G-T hg38:Y:18827372-G-T | P4_Dst | ** | |||||
hg19:Y:21097332-T-C hg38:Y:18935446-T-C | ** | ||||||
hg19:Y:21115646-G-A hg38:Y:18953760-G-A | FTB60955 | ** | |||||
hg19:Y:21115716-C-A hg38:Y:18953830-C-A | ** | ||||||
hg19:Y:21218985-A-T hg38:Y:19057099-A-T | ** | ||||||
hg19:Y:21262774-C-A hg38:Y:19100888-C-A | ** | ||||||
hg19:Y:21320204-C-A hg38:Y:19158318-C-A | ** | ||||||
hg19:Y:21391697-A-G hg38:Y:19229811-A-G | ** | ||||||
hg19:Y:21485814-C-A hg38:Y:19323928-C-A | ** | ||||||
hg19:Y:21509010-C-A hg38:Y:19347124-C-A | ** | ||||||
hg19:Y:21602785-A-C hg38:Y:19440899-A-C | ** | ||||||
hg19:Y:21770825-G-A hg38:Y:19608939-G-A | ** | ||||||
hg19:Y:21932175-A-C hg38:Y:19770289-A-C | ** | ||||||
hg19:Y:21960553-A-G hg38:Y:19798667-A-G | ** | ||||||
hg19:Y:22092735-C-T hg38:Y:19930849-C-T | ** | ||||||
hg19:Y:22162503-G-T hg38:Y:20000617-G-T | ** | ||||||
hg19:Y:22430101-C-A hg38:Y:20268215-C-A | DYZ19 | ** | |||||
hg19:Y:22524955-T-A hg38:Y:20363069-T-A | FT31428 | ** | |||||
hg19:Y:22538395-A-C hg38:Y:20376509-A-C | ** | ||||||
hg19:Y:22564509-C-A hg38:Y:20402623-C-A | ** | ||||||
hg19:Y:22634940-T-G hg38:Y:20473054-T-G | ** | ||||||
hg19:Y:22849815-C-A hg38:Y:20687929-C-A | ** | ||||||
hg19:Y:22857874-C-A hg38:Y:20695988-C-A | ** | ||||||
hg19:Y:22886012-A-G hg38:Y:20724126-A-G | ** | ||||||
hg19:Y:23089589-A-C hg38:Y:20927703-A-C | ** | ||||||
hg19:Y:23115175-C-A hg38:Y:20953289-C-A | ** | ||||||
hg19:Y:23411406-T-C hg38:Y:21249520-T-C | ** | ||||||
hg19:Y:23540495-A-G hg38:Y:21378609-A-G | ** | ||||||
hg19:Y:23596962-T-A hg38:Y:21435076-T-A | ** | ||||||
hg19:Y:23596968-A-T hg38:Y:21435082-A-T | ** | ||||||
hg19:Y:23596971-C-T hg38:Y:21435085-C-T | ** | ||||||
hg19:Y:23633499-C-A hg38:Y:21471613-C-A | ** | ||||||
hg19:Y:23636378-C-A hg38:Y:21474492-C-A | ** | ||||||
hg38:Y:21780371-A-T | ** | ||||||
hg19:Y:28432633-C-G hg38:Y:26286486-C-G | P1_gr2 | ** | |||||
hg19:Y:28479655-C-A hg38:Y:26333508-C-A | ** | ||||||
hg19:Y:28548028-C-A hg38:Y:26401881-C-A | ** | ||||||
hg19:Y:28767027-C-A hg38:Y:26620880-C-A | ** | ||||||
hg19:Y:28768311-C-A hg38:Y:26622164-C-A | ** | ||||||
hg19:Y:28780835-C-A hg38:Y:26634688-C-A | ** | ||||||
hg38:Y:56838592-G-T | ** | ||||||
hg38:Y:56870062-G-T | ** | ||||||
hg19:Y:7289779-GGA-G hg38:Y:7421738-GGA-G | 9×GA | *** | |||||
hg19:Y:15156704-C-CA hg38:Y:13044791-C-CA | S3201 | 9×A | *** | ||||
hg19:Y:16753192-CA-C hg38:Y:14641312-CA-C | L192 | 9×A | *** | ||||
hg19:Y:15921597-C-T hg38:Y:13809717-C-T | *** | ||||||
hg19:Y:23498316-C-CT hg38:Y:21336430-C-CT | 10×T | *** | |||||
hg19:Y:9392351-G-A hg38:Y:9554742-G-A | FT232982 | *** | |||||
hg19:Y:9991637-CTTTTTT-C hg38:Y:10154028-CTTTTTT-C | 20×T | *** | |||||
hg19:Y:23987027-G-GA hg38:Y:21840880-G-GA | 10×A | *** | |||||
hg19:Y:8558485-G-GT hg38:Y:8690444-G-GT | 9×T | *** | |||||
hg19:Y:7307244-GT-G hg38:Y:7439203-GT-G | 11×T | *** | |||||
hg19:Y:15584683-C-A hg38:Y:13472803-C-A | *** | ||||||
hg19:Y:23263730-GAA-G hg38:Y:21101844-GAA-G | 13×A | *** | |||||
hg38:Y:11643710-A-T | DYZ17 | *** | |||||
hg38:Y:10754972-C-T | BY83754 | *** | |||||
hg19:Y:8439220-GT-G,GTT hg38:Y:8571179-GT-G,GTT | 14×T | *** | |||||
hg19:Y:14252189-C-A hg38:Y:12131483-C-A | *** | ||||||
hg19:Y:24520707-G-GA hg38:Y:22374560-G-GA | 10×A | *** | |||||
hg19:Y:9945863-GA-G,GAA hg38:Y:10108254-GA-G,GAA | 16×A | *** | |||||
hg19:Y:23633371-CTTTTT-C hg38:Y:21471485-CTTTTT-C | 21×T | *** | |||||
hg19:Y:15456848-C-A hg38:Y:13344968-C-A | *** | ||||||
hg19:Y:16519316-C-CAA hg38:Y:14407436-C-CAA | 15×A | *** | |||||
hg38:Y:10781711-C-A | *** | ||||||
hg38:Y:10764571-A-ACACCGTTGCG | *** | ||||||
hg19:Y:14200742-TTAGATAGA-T,TTAGA hg38:Y:12080036-TTAGATAGA-T,TTAGA | 15×TAGA | *** | |||||
hg38:Y:10912472-C-A | *** | ||||||
hg19:Y:7142814-C-A hg38:Y:7274773-C-A | *** | ||||||
hg19:Y:21493428-C-A hg38:Y:19331542-C-A | *** | ||||||
hg38:Y:10882926-G-T | *** | ||||||
hg19:Y:13811110-A-T hg38:Y:11690404-A-T | DYZ17 | *** | |||||
hg19:Y:4561306-CA-C hg38:Y:4693265-CA-C | 9×A | *** | |||||
hg19:Y:7200269-C-CTT hg38:Y:7332228-C-CTT | 16×T | *** | |||||
hg38:Y:10682534-T-G | *** | ||||||
hg19:Y:7101839-C-A hg38:Y:7233798-C-A | *** | ||||||
hg19:Y:4557454-C-A hg38:Y:4689413-C-A | *** | ||||||
hg19:Y:5782143-C-A hg38:Y:5914102-C-A | *** | ||||||
hg19:Y:19204221-C-A hg38:Y:17092341-C-A | *** | ||||||
hg19:Y:8253596-C-A hg38:Y:8385555-C-A | *** | ||||||
hg19:Y:14599917-C-A hg38:Y:12488117-C-A | *** | ||||||
hg19:Y:15249097-C-A hg38:Y:13137183-C-A | *** | ||||||
hg19:Y:18244379-C-A hg38:Y:16132499-C-A | *** | ||||||
hg19:Y:14125248-GAAA-G hg38:Y:12004542-GAAA-G | 14×A | *** | |||||
hg38:Y:10691179-CTCCAT-C | *** | ||||||
hg38:Y:56834246-TCCG-T,TCCATTCCG | *** | ||||||
hg19:Y:8649896-G-A hg38:Y:8781855-G-A | *** | ||||||
hg19:Y:13988789-C-A hg38:Y:11868083-C-A | *** | ||||||
hg38:Y:10912465-C-A | *** | ||||||
hg19:Y:9426174-C-A hg38:Y:9588565-C-A | *** | ||||||
hg38:Y:10912471-A-C | *** | ||||||
hg38:Y:10792196-C-A | *** | ||||||
hg19:Y:14027005-G-T hg38:Y:11906299-G-T | *** | ||||||
hg19:Y:5127302-C-A hg38:Y:5259261-C-A | *** | ||||||
hg19:Y:23576533-C-A hg38:Y:21414647-C-A | *** | ||||||
hg19:Y:6675921-C-A hg38:Y:6807880-C-A | *** | ||||||
hg19:Y:21932467-C-A hg38:Y:19770581-C-A | *** | ||||||
hg19:Y:23007629-G-T hg38:Y:20845743-G-T | *** | ||||||
hg19:Y:8427623-G-T hg38:Y:8559582-G-T | *** | ||||||
hg19:Y:16269971-C-A hg38:Y:14158091-C-A | *** | ||||||
hg19:Y:2762535-C-A hg38:Y:2894494-C-A | *** | ||||||
hg19:Y:2859733-C-A hg38:Y:2991692-C-A | *** | ||||||
hg19:Y:3680565-A-T hg38:Y:3812524-A-T | *** | ||||||
hg19:Y:3696108-C-A hg38:Y:3828067-C-A | *** | ||||||
hg19:Y:3716313-C-A hg38:Y:3848272-C-A | *** | ||||||
hg19:Y:6130897-C-A hg38:Y:6262856-C-A | *** | ||||||
hg19:Y:6741832-T-C hg38:Y:6873791-T-C | *** | ||||||
hg19:Y:6921775-G-A hg38:Y:7053734-G-A | *** | ||||||
hg19:Y:7161728-T-A hg38:Y:7293687-T-A | FT263625 | *** | |||||
hg19:Y:7161730-A-G hg38:Y:7293689-A-G | *** | ||||||
hg19:Y:8019117-C-A hg38:Y:8151076-C-A | *** | ||||||
hg19:Y:8019186-G-A hg38:Y:8151145-G-A | *** | ||||||
hg19:Y:8752715-G-T hg38:Y:8884674-G-T | *** | ||||||
hg38:Y:10662839-C-A | *** | ||||||
hg38:Y:10781715-C-T | *** | ||||||
hg38:Y:10912476-T-C | *** | ||||||
hg38:Y:10912477-A-T | *** | ||||||
hg38:Y:10912482-G-T | *** | ||||||
hg38:Y:10937732-C-T | *** | ||||||
hg38:Y:10949037-C-A | *** | ||||||
hg19:Y:13455994-CATTACATTTCATTACATTCGT-C hg38:Y:11300318-CATTACATTTCATTACATTCGT-C | *** | ||||||
hg19:Y:13811167-T-TCTTCC hg38:Y:11690461-T-TCTTCC | DYZ17 | *** | |||||
hg19:Y:14215323-C-A hg38:Y:12094617-C-A | *** | ||||||
hg19:Y:14375132-AAG-A hg38:Y:12254428-AAG-A | *** | ||||||
hg19:Y:14432856-C-A hg38:Y:12312129-C-A | *** | ||||||
hg19:Y:14522511-C-A hg38:Y:12410712-C-A | *** | ||||||
hg19:Y:14578588-G-A hg38:Y:12466788-G-A | *** | ||||||
hg19:Y:14594757-C-A hg38:Y:12482957-C-A | *** | ||||||
hg19:Y:14825125-C-CTT hg38:Y:12713192-C-CTT | 20×T | *** | |||||
hg19:Y:14946136-C-A hg38:Y:12834210-C-A | *** | ||||||
hg19:Y:14946149-C-A hg38:Y:12834223-C-A | *** | ||||||
hg19:Y:14949183-T-C hg38:Y:12837257-T-C | *** | ||||||
hg19:Y:15057738-ATTTTTT-A hg38:Y:12945830-ATTTTTT-A | 18×T | *** | |||||
hg19:Y:15138355-C-A hg38:Y:13026442-C-A | *** | ||||||
hg19:Y:15435620-T-C hg38:Y:13323740-T-C | *** | ||||||
hg19:Y:15619625-C-A hg38:Y:13507745-C-A | *** | ||||||
hg19:Y:15921586-C-T hg38:Y:13809706-C-T | *** | ||||||
hg19:Y:15921591-G-C hg38:Y:13809711-G-C | *** | ||||||
hg19:Y:15998279-C-A hg38:Y:13886399-C-A | *** | ||||||
hg19:Y:16429542-G-T hg38:Y:14317662-G-T | *** | ||||||
hg19:Y:16505918-T-TA,TAA hg38:Y:14394038-T-TA,TAA | 12×A | *** | |||||
hg19:Y:16742830-C-A hg38:Y:14630950-C-A | *** | ||||||
hg19:Y:16764345-C-A hg38:Y:14652465-C-A | *** | ||||||
hg19:Y:16852941-C-G hg38:Y:14741061-C-G | *** | ||||||
hg19:Y:16900842-CTT-C hg38:Y:14788962-CTT-C | 13×T | *** | |||||
hg19:Y:17233288-C-A hg38:Y:15121408-C-A | *** | ||||||
hg19:Y:17374445-C-T hg38:Y:15262565-C-T | *** | ||||||
hg19:Y:17449129-C-A hg38:Y:15337249-C-A | *** | ||||||
hg19:Y:17528021-C-A hg38:Y:15416141-C-A | *** | ||||||
hg19:Y:17712107-C-A hg38:Y:15600227-C-A | *** | ||||||
hg19:Y:17781754-C-A hg38:Y:15669874-C-A | *** | ||||||
hg19:Y:18067067-G-A hg38:Y:15955187-G-A | *** | ||||||
hg19:Y:18537914-C-A hg38:Y:16426034-C-A | *** | ||||||
hg19:Y:18774916-C-A hg38:Y:16663036-C-A | *** | ||||||
hg19:Y:18832156-A-G hg38:Y:16720276-A-G | *** | ||||||
hg19:Y:18868536-C-A hg38:Y:16756656-C-A | *** | ||||||
hg19:Y:18868659-C-A hg38:Y:16756779-C-A | *** | ||||||
hg19:Y:18931237-T-C hg38:Y:16819357-T-C | *** | ||||||
hg19:Y:18933579-C-A hg38:Y:16821699-C-A | *** | ||||||
hg19:Y:19139070-T-C hg38:Y:17027190-T-C | *** | ||||||
hg19:Y:19302717-A-G hg38:Y:17190837-A-G | *** | ||||||
hg19:Y:19333573-C-A hg38:Y:17221693-C-A | *** | ||||||
hg19:Y:19351132-G-T hg38:Y:17239252-G-T | *** | ||||||
hg19:Y:21037037-C-A hg38:Y:18875151-C-A | *** | ||||||
hg19:Y:21305112-C-A hg38:Y:19143226-C-A | *** | ||||||
hg19:Y:21355128-C-A hg38:Y:19193242-C-A | *** | ||||||
hg19:Y:21505125-C-A hg38:Y:19343239-C-A | *** | ||||||
hg19:Y:21549183-GTTT-G,GTT hg38:Y:19387297-GTTT-G,GTT | 17×T | *** | |||||
hg19:Y:21799017-G-A hg38:Y:19637131-G-A | *** | ||||||
hg19:Y:21817830-C-A hg38:Y:19655944-C-A | *** | ||||||
hg19:Y:21884541-T-C hg38:Y:19722655-T-C | FT84055 | *** | |||||
hg19:Y:21986688-C-T hg38:Y:19824802-C-T | *** | ||||||
hg19:Y:21995040-C-A hg38:Y:19833154-C-A | *** | ||||||
hg19:Y:22165390-C-A hg38:Y:20003504-C-A | *** | ||||||
hg19:Y:22579092-C-A hg38:Y:20417206-C-A | *** | ||||||
hg19:Y:22652471-C-A hg38:Y:20490585-C-A | *** | ||||||
hg19:Y:22793159-C-A hg38:Y:20631273-C-A | *** | ||||||
hg19:Y:23001065-ATT-A hg38:Y:20839179-ATT-A | 10×T | *** | |||||
hg19:Y:23010626-C-A hg38:Y:20848740-C-A | *** | ||||||
hg19:Y:23776908-C-A hg38:Y:21615022-C-A | *** | ||||||
hg19:Y:24504594-TA-T hg38:Y:22358447-TA-T | *** | ||||||
hg19:Y:28521500-C-A hg38:Y:26375353-C-A | *** | ||||||
hg38:Y:56742652-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 668159 | 8743147 | 7173666 | 7118409 |
Used in age calculations | 8743147 | 7173666 | 7118409 |
Counts of SNPs | 5 | 4 |
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