Franklin
BigY2: 211188MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 211188 |
---|---|---|---|---|---|---|---|
hg19:Y:26171320-C-A hg38:Y:24025173-C-A | A20672 | P1_Y1 | A* | ||||
hg19:Y:25979863-G-A hg38:Y:23833716-G-A | P1_Y1 | A* | |||||
hg19:Y:21739032-G-C hg38:Y:19577146-G-C | Y | Y | A* | ||||
hg19:Y:26252563-T-C hg38:Y:24106416-T-C | P1_Y1 | A* | |||||
hg19:Y:6174295-G-A hg38:Y:6306254-G-A | IR3_Dst | A* | |||||
hg19:Y:9646931-A-T hg38:Y:9809322-A-T | IR3_Prx | A* | |||||
hg19:Y:9775201-C-G hg38:Y:9937592-C-G | Y | A* | |||||
hg19:Y:22308200-T-G hg38:Y:20146314-T-G | DYZ19 | A* | |||||
hg19:Y:28808244-G-T hg38:Y:26662097-G-T | A* | ||||||
hg19:Y:28809900-G-C hg38:Y:26663753-G-C | A* | ||||||
hg19:Y:28809906-A-C hg38:Y:26663759-A-C | BY45837 | A* | |||||
hg19:Y:28810049-A-G hg38:Y:26663902-A-G | A* | ||||||
hg19:Y:28817320-G-A hg38:Y:26671173-G-A | A* | ||||||
hg19:Y:21822281-T-C hg38:Y:19660395-T-C | BY135725 | Y | Y | + | |||
hg19:Y:21739230-G-T hg38:Y:19577344-G-T | Y | Y | * | ||||
hg19:Y:20815462-TACAC-T hg38:Y:18653576-TACAC-T | P4_Gap | 12×AC | ** | ||||
hg19:Y:22281965-C-T hg38:Y:20120079-C-T | DYZ19 | ** | |||||
hg19:Y:14073053-G-A hg38:Y:11952347-G-A | PF3699 CTS1800 | ** | |||||
hg19:Y:21328626-G-A hg38:Y:19166740-G-A | PH4771 | ** | |||||
hg19:Y:22292151-G-T hg38:Y:20130265-G-T | DYZ19 | ** | |||||
hg19:Y:22292134-G-A hg38:Y:20130248-G-A | DYZ19 | ** | |||||
hg19:Y:22505434-T-G hg38:Y:20343548-T-G | DYZ19 | ** | |||||
hg19:Y:21880880-C-A hg38:Y:19718994-C-A | ZS9494 | ** | |||||
hg19:Y:28816038-G-A hg38:Y:26669891-G-A | ** | ||||||
hg19:Y:22268530-G-C hg38:Y:20106644-G-C | DYZ19 | ** | |||||
hg19:Y:28740548-A-G hg38:Y:26594401-A-G | ** | ||||||
hg38:Y:10965611-T-C | ** | ||||||
hg38:Y:10965626-T-C | ** | ||||||
hg19:Y:14425625-C-A hg38:Y:12304900-C-A | ** | ||||||
hg19:Y:6516531-C-A hg38:Y:6648490-C-A | ** | ||||||
hg38:Y:10914417-G-T | ** | ||||||
hg19:Y:22237690-T-C hg38:Y:20075804-T-C | DYZ19 | ** | |||||
hg38:Y:10787589-TTCCAC-T | ** | ||||||
hg38:Y:10672891-C-A | ** | ||||||
hg38:Y:10751171-T-C | ** | ||||||
hg38:Y:10948353-T-C | ** | ||||||
hg19:Y:14764377-C-A hg38:Y:12652446-C-A | ** | ||||||
hg19:Y:6090431-C-A hg38:Y:6222390-C-A | ** | ||||||
hg19:Y:28589474-C-A hg38:Y:26443327-C-A | ** | ||||||
hg19:Y:17876218-T-C hg38:Y:15764338-T-C | ** | ||||||
hg38:Y:10797764-C-T | ** | ||||||
hg19:Y:15556724-C-A hg38:Y:13444844-C-A | ** | ||||||
hg38:Y:10955390-C-T | ** | ||||||
hg19:Y:22135707-C-A hg38:Y:19973821-C-A | FT140727 | ** | |||||
hg38:Y:10773372-A-G | ** | ||||||
hg38:Y:11663474-C-A | DYZ17 | ** | |||||
hg19:Y:7108234-A-G hg38:Y:7240193-A-G | ** | ||||||
hg19:Y:24406379-T-C hg38:Y:22260232-T-C | ** | ||||||
hg19:Y:15400331-C-A hg38:Y:13288451-C-A | ** | ||||||
hg19:Y:15612372-G-C hg38:Y:13500492-G-C | ** | ||||||
hg38:Y:10786413-C-T | ** | ||||||
hg19:Y:28581609-C-A hg38:Y:26435462-C-A | ** | ||||||
hg19:Y:14147945-G-A hg38:Y:12027239-G-A | ** | ||||||
hg19:Y:18743385-C-A hg38:Y:16631505-C-A | ** | ||||||
hg19:Y:13898758-T-TG hg38:Y:11778052-T-TG | ** | ||||||
hg19:Y:8816317-T-A hg38:Y:8948276-T-A | ** | ||||||
hg19:Y:17876194-T-C hg38:Y:15764314-T-C | ** | ||||||
hg38:Y:10927227-C-G | ** | ||||||
hg19:Y:28816046-G-T hg38:Y:26669899-G-T | ** | ||||||
hg19:Y:22235182-A-G hg38:Y:20073296-A-G | DYZ19 | ** | |||||
hg19:Y:25466538-AAG-A hg38:Y:23320391-AAG-A | P2_r2 | ** | |||||
hg38:Y:10961440-C-T | ** | ||||||
hg38:Y:10861395-T-C | ** | ||||||
hg19:Y:14147969-C-T hg38:Y:12027263-C-T | ** | ||||||
hg19:Y:21946246-C-A hg38:Y:19784360-C-A | ** | ||||||
hg38:Y:10673950-T-G | ** | ||||||
hg19:Y:22325180-G-T hg38:Y:20163294-G-T | DYZ19 | ** | |||||
hg38:Y:10948365-C-A | ** | ||||||
hg19:Y:3131757-G-T hg38:Y:3263716-G-T | ** | ||||||
hg19:Y:14724484-C-A hg38:Y:12612552-C-A | ** | ||||||
hg19:Y:6213879-T-C hg38:Y:6345838-T-C | IR3_Dst | ** | |||||
hg19:Y:14430504-C-A hg38:Y:12309777-C-A | ** | ||||||
hg19:Y:22857813-C-A hg38:Y:20695927-C-A | ** | ||||||
hg19:Y:7704899-C-A hg38:Y:7836858-C-A | ** | ||||||
hg19:Y:28816085-G-A hg38:Y:26669938-G-A | ** | ||||||
hg19:Y:6213888-A-G hg38:Y:6345847-A-G | IR3_Dst | ** | |||||
hg19:Y:5888133-C-A hg38:Y:6020092-C-A | ** | ||||||
hg19:Y:14147906-G-A hg38:Y:12027200-G-A | ** | ||||||
hg19:Y:23291331-C-A hg38:Y:21129445-C-A | ** | ||||||
hg38:Y:10987549-C-T | ** | ||||||
hg38:Y:11031208-T-C | ** | ||||||
hg19:Y:14272368-C-A hg38:Y:12151662-C-A | ** | ||||||
hg19:Y:13856004-C-A hg38:Y:11735298-C-A | DYZ17 | ** | |||||
hg19:Y:23807436-C-A hg38:Y:21645550-C-A | ** | ||||||
hg38:Y:10899248-C-A | ** | ||||||
hg38:Y:10865860-T-C | ** | ||||||
hg38:Y:10844237-C-A | ** | ||||||
hg19:Y:7664239-C-A hg38:Y:7796198-C-A | ** | ||||||
hg19:Y:7338146-C-A hg38:Y:7470105-C-A | ** | ||||||
hg19:Y:19575849-C-A hg38:Y:17463969-C-A | P5_Prx | ** | |||||
hg19:Y:13445532-C-A hg38:Y:11289856-C-A | ** | ||||||
hg38:Y:10991281-A-G | FT439462 | ** | |||||
hg19:Y:15288920-A-G hg38:Y:13177019-A-G | ** | ||||||
hg38:Y:10794822-G-T | ** | ||||||
hg19:Y:6822497-C-A hg38:Y:6954456-C-A | ** | ||||||
hg19:Y:24244632-T-G hg38:Y:22098485-T-G | P3_b1 | ** | |||||
hg38:Y:10935552-C-A | ** | ||||||
hg19:Y:14147898-A-G hg38:Y:12027192-A-G | ** | ||||||
hg19:Y:17313575-C-A hg38:Y:15201695-C-A | ** | ||||||
hg19:Y:6730347-C-A hg38:Y:6862306-C-A | ** | ||||||
hg19:Y:15556872-C-A hg38:Y:13444992-C-A | FT352758 | ** | |||||
hg38:Y:11016568-G-T | ** | ||||||
hg19:Y:22135641-C-A hg38:Y:19973755-C-A | ** | ||||||
hg38:Y:10949524-A-C | ** | ||||||
hg38:Y:10664109-C-A | ** | ||||||
hg19:Y:5278155-G-T hg38:Y:5410114-G-T | ** | ||||||
hg38:Y:10824778-T-C | ** | ||||||
hg38:Y:10955461-C-T | ** | ||||||
hg19:Y:14147918-C-T hg38:Y:12027212-C-T | ** | ||||||
hg19:Y:8890982-G-T hg38:Y:9022941-G-T | ** | ||||||
hg19:Y:4215874-G-T hg38:Y:4347833-G-T | ** | ||||||
hg19:Y:21629558-G-T hg38:Y:19467672-G-T | ** | ||||||
hg19:Y:21629564-A-G hg38:Y:19467678-A-G | ** | ||||||
hg19:Y:28664883-C-A hg38:Y:26518736-C-A | ** | ||||||
hg19:Y:19059800-G-T hg38:Y:16947920-G-T | ** | ||||||
hg38:Y:10836099-C-T | ** | ||||||
hg38:Y:10836104-C-T | ** | ||||||
hg38:Y:10766549-T-G | ** | ||||||
hg19:Y:15781637-C-A hg38:Y:13669757-C-A | ** | ||||||
hg19:Y:19059804-G-C hg38:Y:16947924-G-C | ** | ||||||
hg19:Y:9965174-G-T hg38:Y:10127565-G-T | ** | ||||||
hg19:Y:15932300-C-A hg38:Y:13820420-C-A | ** | ||||||
hg19:Y:8290185-C-A hg38:Y:8422144-C-A | ** | ||||||
hg38:Y:10955438-C-A | ** | ||||||
hg19:Y:14910798-ATTTTTT-A hg38:Y:12798865-ATTTTTT-A | 21×T | ** | |||||
hg19:Y:21371616-T-G hg38:Y:19209730-T-G | ** | ||||||
hg19:Y:7041710-A-C hg38:Y:7173669-A-C | ** | ||||||
hg19:Y:18288702-C-A hg38:Y:16176822-C-A | P6_Prx | ** | |||||
hg38:Y:10911090-T-A | ** | ||||||
hg19:Y:24416868-C-A hg38:Y:22270721-C-A | ** | ||||||
hg19:Y:8751332-C-A hg38:Y:8883291-C-A | ** | ||||||
hg19:Y:23047650-C-A hg38:Y:20885764-C-A | ** | ||||||
hg19:Y:19463715-C-A hg38:Y:17351835-C-A | ** | ||||||
hg19:Y:16003993-C-A hg38:Y:13892113-C-A | ** | ||||||
hg19:Y:7780646-C-A hg38:Y:7912605-C-A | FT84824 | ** | |||||
hg19:Y:13250123-A-T hg38:Y:11094447-A-T | ** | ||||||
hg19:Y:8913272-T-A hg38:Y:9045231-T-A | ** | ||||||
hg19:Y:6674907-C-A hg38:Y:6806866-C-A | ** | ||||||
hg38:Y:56842849-C-A | ** | ||||||
hg38:Y:56844201-G-T | ** | ||||||
hg19:Y:21220344-T-C hg38:Y:19058458-T-C | ** | ||||||
hg19:Y:15288894-T-C hg38:Y:13176993-T-C | ** | ||||||
hg19:Y:15288895-G-A hg38:Y:13176994-G-A | ** | ||||||
hg19:Y:14054090-C-A hg38:Y:11933384-C-A | ** | ||||||
hg38:Y:10824767-G-C | ** | ||||||
hg19:Y:2894633-C-A hg38:Y:3026592-C-A | ** | ||||||
hg19:Y:2996639-GACAC-G hg38:Y:3128598-GACAC-G | 10×AC | ** | |||||
hg19:Y:3051425-G-T hg38:Y:3183384-G-T | ** | ||||||
hg19:Y:3131835-G-T hg38:Y:3263794-G-T | ** | ||||||
hg19:Y:3657841-G-T hg38:Y:3789800-G-T | ** | ||||||
hg19:Y:3663016-T-G hg38:Y:3794975-T-G | ** | ||||||
hg19:Y:3848717-C-A hg38:Y:3980676-C-A | ** | ||||||
hg19:Y:4416919-C-A hg38:Y:4548878-C-A | ** | ||||||
hg19:Y:4438022-A-C hg38:Y:4569981-A-C | ** | ||||||
hg19:Y:4448972-C-CT hg38:Y:4580931-C-CT | ** | ||||||
hg19:Y:4759052-G-T hg38:Y:4891011-G-T | ** | ||||||
hg19:Y:4769371-A-G hg38:Y:4901330-A-G | ** | ||||||
hg19:Y:5071752-C-A hg38:Y:5203711-C-A | ** | ||||||
hg19:Y:5274684-C-A hg38:Y:5406643-C-A | ** | ||||||
hg19:Y:5388111-T-C hg38:Y:5520070-T-C | ** | ||||||
hg19:Y:5803618-C-A hg38:Y:5935577-C-A | ** | ||||||
hg19:Y:5871980-C-T hg38:Y:6003939-C-T | ** | ||||||
hg19:Y:6044705-G-A hg38:Y:6176664-G-A | FTB69784 | ** | |||||
hg19:Y:6044712-C-T hg38:Y:6176671-C-T | ** | ||||||
hg19:Y:6131507-T-C hg38:Y:6263466-T-C | ** | ||||||
hg19:Y:6132051-C-A hg38:Y:6264010-C-A | ** | ||||||
hg19:Y:6206140-C-A hg38:Y:6338099-C-A | IR3_Dst | ** | |||||
hg19:Y:6213873-A-T hg38:Y:6345832-A-T | IR3_Dst | ** | |||||
hg19:Y:6213874-C-T hg38:Y:6345833-C-T | IR3_Dst | ** | |||||
hg19:Y:6213889-C-G hg38:Y:6345848-C-G | IR3_Dst | ** | |||||
hg19:Y:6213900-C-G hg38:Y:6345859-C-G | IR3_Dst | ** | |||||
hg19:Y:6293412-G-T hg38:Y:6425371-G-T | IR3_Dst | ** | |||||
hg19:Y:6347541-G-T hg38:Y:6479500-G-T | ** | ||||||
hg19:Y:6458012-C-A hg38:Y:6589971-C-A | ** | ||||||
hg19:Y:6513478-T-A hg38:Y:6645437-T-A | ** | ||||||
hg19:Y:6747079-A-G hg38:Y:6879038-A-G | ** | ||||||
hg19:Y:6999048-G-A hg38:Y:7131007-G-A | ** | ||||||
hg19:Y:7085167-C-A hg38:Y:7217126-C-A | ** | ||||||
hg19:Y:7108244-T-G hg38:Y:7240203-T-G | ** | ||||||
hg19:Y:7223533-C-A hg38:Y:7355492-C-A | ** | ||||||
hg19:Y:7242492-C-CTT hg38:Y:7374451-C-CTT | ** | ||||||
hg19:Y:7254191-C-A hg38:Y:7386150-C-A | ** | ||||||
hg19:Y:7318562-C-T hg38:Y:7450521-C-T | ** | ||||||
hg19:Y:7336877-C-A hg38:Y:7468836-C-A | ** | ||||||
hg19:Y:7717689-C-A hg38:Y:7849648-C-A | ** | ||||||
hg19:Y:8109891-G-A hg38:Y:8241850-G-A | ** | ||||||
hg19:Y:8525375-C-T hg38:Y:8657334-C-T | ** | ||||||
hg19:Y:8694248-C-A hg38:Y:8826207-C-A | ** | ||||||
hg19:Y:8694272-A-G hg38:Y:8826231-A-G | ** | ||||||
hg19:Y:8751263-A-C hg38:Y:8883222-A-C | ** | ||||||
hg19:Y:8856052-G-T hg38:Y:8988011-G-T | ** | ||||||
hg38:Y:9111033-C-A | ** | ||||||
hg19:Y:9040854-C-A hg38:Y:9203245-C-A | ** | ||||||
hg19:Y:9076780-A-C hg38:Y:9239171-A-C | FT407705 | ** | |||||
hg19:Y:9602482-G-T hg38:Y:9764873-G-T | IR3_Prx | ** | |||||
hg19:Y:9602544-G-T hg38:Y:9764935-G-T | IR3_Prx | ** | |||||
hg19:Y:9804431-C-A hg38:Y:9966822-C-A | ** | ||||||
hg19:Y:9936533-C-T hg38:Y:10098924-C-T | ** | ||||||
hg19:Y:10031355-C-A hg38:Y:10193746-C-A | ** | ||||||
hg19:Y:10050328-G-A hg38:Y:10212719-G-A | ** | ||||||
hg38:Y:10685195-TC-T | ** | ||||||
hg38:Y:10745199-C-A | ** | ||||||
hg38:Y:10745210-G-C | ** | ||||||
hg38:Y:10749549-C-A | ** | ||||||
hg38:Y:10759783-T-TCCAC | ** | ||||||
hg38:Y:10762905-C-A | ** | ||||||
hg38:Y:10765824-CT-C | ** | ||||||
hg38:Y:10766375-T-G | ** | ||||||
hg38:Y:10766378-A-G | ** | ||||||
hg38:Y:10766658-A-G | ** | ||||||
hg38:Y:10766659-C-T | ** | ||||||
hg38:Y:10773363-C-T | FT430583 | ** | |||||
hg38:Y:10780646-A-G | ** | ||||||
hg38:Y:10780651-A-C | ** | ||||||
hg38:Y:10783724-G-A | ** | ||||||
hg38:Y:10786415-G-C | ** | ||||||
hg38:Y:10786447-ATTCC-A | ** | ||||||
hg38:Y:10786455-CC-A | ** | ||||||
hg38:Y:10792457-A-GGGTTT | ** | ||||||
hg38:Y:10796678-A-AATTCT | ** | ||||||
hg38:Y:10811984-C-A | ** | ||||||
hg38:Y:10817299-G-T | ** | ||||||
hg38:Y:10822821-C-A | ** | ||||||
hg38:Y:10824745-T-C | ** | ||||||
hg38:Y:10824748-A-C | ** | ||||||
hg38:Y:10824760-A-C | ** | ||||||
hg38:Y:10824765-T-A | FT432845 | ** | |||||
hg38:Y:10824781-TC-T | ** | ||||||
hg38:Y:10824785-C-CG | ** | ||||||
hg38:Y:10836088-A-T | ** | ||||||
hg38:Y:10836101-C-T | FT433403 | ** | |||||
hg38:Y:10836119-C-G | ** | ||||||
hg38:Y:10836120-C-T | FT433405 | ** | |||||
hg38:Y:10836121-T-C | ** | ||||||
hg38:Y:10836123-T-G | ** | ||||||
hg38:Y:10843929-A-T | FT433739 | ** | |||||
hg38:Y:10844148-C-G | ** | ||||||
hg38:Y:10847140-T-G | ** | ||||||
hg38:Y:10850790-C-A | ** | ||||||
hg38:Y:10858571-T-G | ** | ||||||
hg38:Y:10861367-T-C | ** | ||||||
hg38:Y:10861374-G-A | FT63804 | ** | |||||
hg38:Y:10861384-T-G | ** | ||||||
hg38:Y:10861386-C-G | ** | ||||||
hg38:Y:10861403-A-G | ** | ||||||
hg38:Y:10861428-CGCTCC-T | ** | ||||||
hg38:Y:10880730-T-C | ** | ||||||
hg38:Y:10881892-C-A | ** | ||||||
hg38:Y:10884804-T-G | ** | ||||||
hg38:Y:10888409-C-A | ** | ||||||
hg38:Y:10906702-G-T | ** | ||||||
hg38:Y:10910408-G-C | ** | ||||||
hg38:Y:10911091-G-A | ** | ||||||
hg38:Y:10911098-C-G | ** | ||||||
hg38:Y:10911109-C-CA | ** | ||||||
hg38:Y:10911112-C-A | ** | ||||||
hg38:Y:10927222-C-CCACTT | ** | ||||||
hg38:Y:10930221-C-A | ** | ||||||
hg38:Y:10935531-ACATTC-A | ** | ||||||
hg38:Y:10940019-C-T | ** | ||||||
hg38:Y:10940023-A-T | ** | ||||||
hg38:Y:10940031-C-T | ** | ||||||
hg38:Y:10948307-A-T | ** | ||||||
hg38:Y:10949269-A-T | ** | ||||||
hg38:Y:10955412-ATTC-A | ** | ||||||
hg38:Y:10955419-T-C | ** | ||||||
hg38:Y:10955422-TGT-C | ** | ||||||
hg38:Y:10955470-CCACTCCA-C | ** | ||||||
hg38:Y:10961442-A-T | ** | ||||||
hg38:Y:10961563-A-C | ** | ||||||
hg38:Y:10961570-T-G | ** | ||||||
hg38:Y:10967738-C-G | ** | ||||||
hg38:Y:10979997-T-G | ** | ||||||
hg38:Y:10986238-C-A | ** | ||||||
hg38:Y:10988322-C-A | ** | ||||||
hg38:Y:10991878-C-A | ** | ||||||
hg38:Y:11003269-C-A | ** | ||||||
hg38:Y:11011236-C-A | FT393600 | ** | |||||
hg38:Y:11027926-T-A | ** | ||||||
hg19:Y:13207014-C-A hg38:Y:11051338-C-A | ** | ||||||
hg19:Y:13228126-C-A hg38:Y:11072450-C-A | ** | ||||||
hg19:Y:13250115-G-T hg38:Y:11094439-G-T | ** | ||||||
hg19:Y:13457727-A-AT hg38:Y:11302051-A-AT | ** | ||||||
hg19:Y:13457740-C-CGGTTTGAAGG hg38:Y:11302064-C-CGGTTTGAAGG | ** | ||||||
hg19:Y:13526113-C-A hg38:Y:11370437-C-A | ** | ||||||
hg19:Y:13602454-T-G hg38:Y:11446778-T-G | ** | ||||||
hg38:Y:11643644-G-T | DYZ17 | ** | |||||
hg38:Y:11659934-A-C | DYZ17 | ** | |||||
hg38:Y:11659937-C-G | DYZ17 | ** | |||||
hg38:Y:11671335-A-C | DYZ17 | ** | |||||
hg38:Y:11671336-G-C | DYZ17 | ** | |||||
hg38:Y:11671341-G-C | DYZ17 | ** | |||||
hg19:Y:13987286-G-C hg38:Y:11866580-G-C | ** | ||||||
hg19:Y:14055682-G-A hg38:Y:11934976-G-A | ** | ||||||
hg19:Y:14059963-C-A hg38:Y:11939257-C-A | ** | ||||||
hg19:Y:14147903-C-T hg38:Y:12027197-C-T | ** | ||||||
hg19:Y:14147961-C-T hg38:Y:12027255-C-T | ** | ||||||
hg19:Y:14151533-C-A hg38:Y:12030827-C-A | ** | ||||||
hg19:Y:14181622-C-G hg38:Y:12060916-C-G | ** | ||||||
hg19:Y:14233815-C-CTT hg38:Y:12113109-C-CTT | 11×T | ** | |||||
hg19:Y:14267022-C-A hg38:Y:12146316-C-A | ** | ||||||
hg19:Y:14445131-C-A hg38:Y:12324404-C-A | ** | ||||||
hg19:Y:14511866-G-A hg38:Y:12400071-G-A | ** | ||||||
hg19:Y:14549072-A-G hg38:Y:12437273-A-G | ** | ||||||
hg19:Y:14582418-G-T hg38:Y:12470618-G-T | ** | ||||||
hg19:Y:14695986-T-G hg38:Y:12584052-T-G | ** | ||||||
hg19:Y:14727370-C-A hg38:Y:12615438-C-A | ** | ||||||
hg19:Y:14734208-C-A hg38:Y:12622276-C-A | ** | ||||||
hg19:Y:14908554-A-T hg38:Y:12796621-A-T | ** | ||||||
hg19:Y:15133288-C-A hg38:Y:13021375-C-A | ** | ||||||
hg19:Y:15186435-C-T hg38:Y:13074521-C-T | ** | ||||||
hg19:Y:15186437-C-T hg38:Y:13074523-C-T | ** | ||||||
hg19:Y:15186446-G-A hg38:Y:13074532-G-A | ** | ||||||
hg19:Y:15186468-C-A hg38:Y:13074554-C-A | ** | ||||||
hg19:Y:15221345-A-G hg38:Y:13109431-A-G | ** | ||||||
hg19:Y:15254322-C-A hg38:Y:13142408-C-A | ** | ||||||
hg19:Y:15263578-A-G hg38:Y:13151668-A-G | ** | ||||||
hg19:Y:15270932-C-A hg38:Y:13159021-C-A | ** | ||||||
hg19:Y:15364673-T-C hg38:Y:13252793-T-C | ** | ||||||
hg19:Y:15683817-T-C hg38:Y:13571937-T-C | ** | ||||||
hg19:Y:15687596-A-G hg38:Y:13575716-A-G | ** | ||||||
hg19:Y:15745467-C-A hg38:Y:13633587-C-A | ** | ||||||
hg19:Y:15842764-G-A hg38:Y:13730884-G-A | ** | ||||||
hg19:Y:15858374-C-T hg38:Y:13746494-C-T | ** | ||||||
hg19:Y:15905085-A-G hg38:Y:13793205-A-G | ** | ||||||
hg19:Y:16079333-T-C hg38:Y:13967453-T-C | ** | ||||||
hg19:Y:16079334-G-A hg38:Y:13967454-G-A | ** | ||||||
hg19:Y:16319759-G-C hg38:Y:14207879-G-C | ** | ||||||
hg19:Y:16568082-C-A hg38:Y:14456202-C-A | ** | ||||||
hg19:Y:16620124-C-G hg38:Y:14508244-C-G | ** | ||||||
hg19:Y:16679344-G-C hg38:Y:14567464-G-C | ** | ||||||
hg19:Y:16704455-C-A hg38:Y:14592575-C-A | ** | ||||||
hg19:Y:16800784-C-A hg38:Y:14688904-C-A | ** | ||||||
hg19:Y:16971215-G-A hg38:Y:14859335-G-A | ** | ||||||
hg19:Y:17636757-C-A hg38:Y:15524877-C-A | ** | ||||||
hg19:Y:17825628-A-C hg38:Y:15713748-A-C | ** | ||||||
hg19:Y:17844219-G-T hg38:Y:15732339-G-T | ** | ||||||
hg19:Y:17876187-G-GGCA hg38:Y:15764307-G-GGCA | ** | ||||||
hg19:Y:17876207-G-C hg38:Y:15764327-G-C | ** | ||||||
hg19:Y:17876212-G-A hg38:Y:15764332-G-A | ** | ||||||
hg19:Y:18040738-A-T hg38:Y:15928858-A-T | ** | ||||||
hg19:Y:18040756-C-A hg38:Y:15928876-C-A | ** | ||||||
hg19:Y:18040761-G-T hg38:Y:15928881-G-T | ** | ||||||
hg19:Y:18040780-T-C hg38:Y:15928900-T-C | ** | ||||||
hg19:Y:18040790-T-G hg38:Y:15928910-T-G | ** | ||||||
hg19:Y:18189318-T-C hg38:Y:16077438-T-C | ** | ||||||
hg19:Y:18210839-C-G hg38:Y:16098959-C-G | ** | ||||||
hg19:Y:18745895-A-G hg38:Y:16634015-A-G | ** | ||||||
hg19:Y:18990291-C-A hg38:Y:16878411-C-A | ** | ||||||
hg19:Y:19036778-G-T hg38:Y:16924898-G-T | ** | ||||||
hg19:Y:19044358-A-T hg38:Y:16932478-A-T | ** | ||||||
hg19:Y:19058064-C-A hg38:Y:16946184-C-A | ** | ||||||
hg19:Y:19125075-C-A hg38:Y:17013195-C-A | ** | ||||||
hg19:Y:19254504-G-T hg38:Y:17142624-G-T | ** | ||||||
hg19:Y:19271285-T-C hg38:Y:17159405-T-C | ** | ||||||
hg19:Y:19479735-GCGCA-G hg38:Y:17367855-GCGCA-G | ** | ||||||
hg19:Y:19505393-A-G hg38:Y:17393513-A-G | ** | ||||||
hg19:Y:19848191-C-T hg38:Y:17736311-C-T | P5_Prx | ** | |||||
hg19:Y:19873582-C-T hg38:Y:17761702-C-T | P5_Prx | ** | |||||
hg19:Y:19873601-A-G hg38:Y:17761721-A-G | P5_Prx | ** | |||||
hg19:Y:19924525-T-C hg38:Y:17812645-T-C | P5_Prx | ** | |||||
hg19:Y:20840722-A-G hg38:Y:18678836-A-G | P4_Gap | ** | |||||
hg19:Y:21069935-C-A hg38:Y:18908049-C-A | ** | ||||||
hg19:Y:21220352-C-T hg38:Y:19058466-C-T | ** | ||||||
hg19:Y:21323347-T-G hg38:Y:19161461-T-G | ** | ||||||
hg19:Y:21334584-G-A hg38:Y:19172698-G-A | ** | ||||||
hg19:Y:21351648-T-C hg38:Y:19189762-T-C | ** | ||||||
hg19:Y:21442833-C-A hg38:Y:19280947-C-A | ** | ||||||
hg19:Y:21924120-C-A hg38:Y:19762234-C-A | ** | ||||||
hg19:Y:21979902-C-A hg38:Y:19818016-C-A | ** | ||||||
hg19:Y:22095662-C-A hg38:Y:19933776-C-A | ** | ||||||
hg19:Y:22269698-G-A hg38:Y:20107812-G-A | DYZ19 | ** | |||||
hg19:Y:22281959-C-G hg38:Y:20120073-C-G | DYZ19 | ** | |||||
hg19:Y:22292095-G-A hg38:Y:20130209-G-A | DYZ19 | ** | |||||
hg19:Y:22292098-T-C hg38:Y:20130212-T-C | DYZ19 | ** | |||||
hg19:Y:22460813-T-C hg38:Y:20298927-T-C | FGC51442 | DYZ19 | ** | ||||
hg19:Y:22537688-T-C hg38:Y:20375802-T-C | ** | ||||||
hg19:Y:22782320-T-C hg38:Y:20620434-T-C | ** | ||||||
hg19:Y:22841745-A-C hg38:Y:20679859-A-C | ** | ||||||
hg19:Y:22841861-G-T hg38:Y:20679975-G-T | ** | ||||||
hg19:Y:22842092-C-G hg38:Y:20680206-C-G | FTB34408 | ** | |||||
hg19:Y:22881219-C-A hg38:Y:20719333-C-A | ** | ||||||
hg19:Y:23009383-T-C hg38:Y:20847497-T-C | ** | ||||||
hg19:Y:23169831-C-T hg38:Y:21007945-C-T | ** | ||||||
hg19:Y:23169846-G-A hg38:Y:21007960-G-A | ** | ||||||
hg19:Y:23198169-G-T hg38:Y:21036283-G-T | ** | ||||||
hg19:Y:23261602-T-C hg38:Y:21099716-T-C | ** | ||||||
hg19:Y:23598067-C-A hg38:Y:21436181-C-A | ** | ||||||
hg19:Y:23609445-C-A hg38:Y:21447559-C-A | ** | ||||||
hg19:Y:23802045-TG-T hg38:Y:21640159-TG-T | ** | ||||||
hg19:Y:24432643-T-C hg38:Y:22286496-T-C | ** | ||||||
hg19:Y:26078851-T-C hg38:Y:23932704-T-C | BY226619 | P1_Y1 | ** | ||||
hg19:Y:26344351-C-T hg38:Y:24198204-C-T | P1_Y1 | ** | |||||
hg19:Y:27692864-G-A hg38:Y:25546717-G-A | P1_Y2 | ** | |||||
hg19:Y:27862655-A-G hg38:Y:25716508-A-G | P1_Y2 | ** | |||||
hg19:Y:28234442-TA-T hg38:Y:26088295-TA-T | P1_b4 | ** | |||||
hg19:Y:28544491-C-A hg38:Y:26398344-C-A | ** | ||||||
hg19:Y:28611535-A-G hg38:Y:26465388-A-G | ** | ||||||
hg19:Y:28611536-T-C hg38:Y:26465389-T-C | ** | ||||||
hg19:Y:28622856-T-A hg38:Y:26476709-T-A | ** | ||||||
hg19:Y:28689052-A-G hg38:Y:26542905-A-G | ** | ||||||
hg19:Y:28716377-T-C hg38:Y:26570230-T-C | ** | ||||||
hg19:Y:28728314-C-A hg38:Y:26582167-C-A | ** | ||||||
hg19:Y:28734749-C-A hg38:Y:26588602-C-A | ** | ||||||
hg19:Y:28740558-C-T hg38:Y:26594411-C-T | ** | ||||||
hg38:Y:56728163-A-G | ** | ||||||
hg38:Y:56827545-TCCTTTCCATTCC-T | ** | ||||||
hg38:Y:56841519-C-A | ** | ||||||
hg38:Y:56842852-C-T | ** | ||||||
hg19:Y:13644719-G-A hg38:Y:11489043-G-A | FGC79655 | *** | |||||
hg19:Y:18972216-C-CA hg38:Y:16860336-C-CA | 8×A | *** | |||||
hg19:Y:13196107-C-G hg38:Y:11040431-C-G | *** | ||||||
hg19:Y:14322128-C-T hg38:Y:12201422-C-T | *** | ||||||
hg19:Y:14322133-A-C hg38:Y:12201427-A-C | *** | ||||||
hg19:Y:13194008-C-A hg38:Y:11038332-C-A | *** | ||||||
hg19:Y:21318477-CAAAAAA-C hg38:Y:19156591-CAAAAAA-C | 19×A | *** | |||||
hg19:Y:23142052-G-T hg38:Y:20980166-G-T | *** | ||||||
hg19:Y:19558348-C-A hg38:Y:17446468-C-A | *** | ||||||
hg19:Y:6768885-CTT-C,CTTT hg38:Y:6900844-CTT-C,CTTT | 17×T | *** | |||||
hg38:Y:10686575-C-G | *** | ||||||
hg19:Y:16868393-T-C hg38:Y:14756513-T-C | *** | ||||||
hg19:Y:21222155-G-A hg38:Y:19060269-G-A | *** | ||||||
hg19:Y:19505368-C-A hg38:Y:17393488-C-A | YFS2975623 | *** | |||||
hg19:Y:15199993-T-C hg38:Y:13088079-T-C | *** | ||||||
hg19:Y:15200017-TA-T hg38:Y:13088103-TA-T | *** | ||||||
hg19:Y:23493697-G-T hg38:Y:21331811-G-T | *** | ||||||
hg38:Y:10686628-T-TTCCAC | *** | ||||||
hg19:Y:17375422-G-T hg38:Y:15263542-G-T | *** | ||||||
hg19:Y:6975265-A-C hg38:Y:7107224-A-C | *** | ||||||
hg19:Y:23490993-C-T hg38:Y:21329107-C-T | *** | ||||||
hg38:Y:10880327-C-CATTAA | *** | ||||||
hg19:Y:15495460-CAAAAAA-C hg38:Y:13383580-CAAAAAA-C | 16×A | *** | |||||
hg38:Y:10946714-A-C | A20860 | BY209827 | *** | ||||
hg19:Y:13725995-G-A hg38:Y:11570319-G-A | DYZ17 | *** | |||||
hg38:Y:10973662-C-G | *** | ||||||
hg19:Y:7099368-A-G hg38:Y:7231327-A-G | *** | ||||||
hg19:Y:2845219-C-T hg38:Y:2977178-C-T | *** | ||||||
hg19:Y:5412277-C-A hg38:Y:5544236-C-A | *** | ||||||
hg19:Y:6734508-C-A hg38:Y:6866467-C-A | *** | ||||||
hg19:Y:7099354-A-C hg38:Y:7231313-A-C | *** | ||||||
hg19:Y:7383541-A-G hg38:Y:7515500-A-G | *** | ||||||
hg19:Y:7991111-C-A hg38:Y:8123070-C-A | *** | ||||||
hg19:Y:8019847-ATTT-A hg38:Y:8151806-ATTT-A | 12×T | *** | |||||
hg19:Y:8658953-C-A hg38:Y:8790912-C-A | *** | ||||||
hg19:Y:8705698-CTTT-C,CTTTT hg38:Y:8837657-CTTT-C,CTTTT | 16×T | *** | |||||
hg19:Y:9777507-CAAA-C,CAAAAA hg38:Y:9939898-CAAA-C,CAAAAA | 17×A | *** | |||||
hg38:Y:10673907-C-A | *** | ||||||
hg38:Y:10754744-G-C,GATA | *** | ||||||
hg38:Y:10776092-C-G | *** | ||||||
hg19:Y:13196100-T-A hg38:Y:11040424-T-A | *** | ||||||
hg19:Y:13487767-ACAGGCCTCGACGCCCTGGGACC-A hg38:Y:11332091-ACAGGCCTCGACGCCCTGGGACC-A | *** | ||||||
hg19:Y:13644722-TC-T hg38:Y:11489046-TC-T | *** | ||||||
hg38:Y:11659752-G-A | DYZ17 | *** | |||||
hg19:Y:14281283-C-A hg38:Y:12160577-C-A | *** | ||||||
hg19:Y:14297460-T-C hg38:Y:12176754-T-C | BY153588 | *** | |||||
hg19:Y:14464213-T-G hg38:Y:12343486-T-G | *** | ||||||
hg19:Y:14485005-T-C hg38:Y:12364274-T-C | *** | ||||||
hg19:Y:14520673-C-A hg38:Y:12408874-C-A | *** | ||||||
hg19:Y:14685921-G-A hg38:Y:12573987-G-A | *** | ||||||
hg19:Y:14764786-G-A hg38:Y:12652855-G-A | *** | ||||||
hg19:Y:15604990-C-A hg38:Y:13493110-C-A | *** | ||||||
hg19:Y:15622778-CAA-C hg38:Y:13510898-CAA-C | 9×A | *** | |||||
hg19:Y:16720515-A-G hg38:Y:14608635-A-G | *** | ||||||
hg19:Y:17552328-C-A hg38:Y:15440448-C-A | *** | ||||||
hg19:Y:17884829-C-A hg38:Y:15772949-C-A | *** | ||||||
hg19:Y:18106254-G-A hg38:Y:15994374-G-A | FTB7554 | *** | |||||
hg19:Y:18714038-C-A hg38:Y:16602158-C-A | *** | ||||||
hg19:Y:18890434-A-G hg38:Y:16778554-A-G | *** | ||||||
hg19:Y:19342581-T-G hg38:Y:17230701-T-G | *** | ||||||
hg19:Y:19430014-AT-A hg38:Y:17318134-AT-A | *** | ||||||
hg19:Y:21983261-C-A hg38:Y:19821375-C-A | *** | ||||||
hg19:Y:22287141-C-A hg38:Y:20125255-C-A | DYZ19 | *** | |||||
hg19:Y:22430050-A-C hg38:Y:20268164-A-C | DYZ19 | *** | |||||
hg19:Y:22436828-C-A hg38:Y:20274942-C-A | DYZ19 | *** | |||||
hg19:Y:22461311-T-A hg38:Y:20299425-T-A | DYZ19 | *** | |||||
hg19:Y:22552264-C-A hg38:Y:20390378-C-A | *** | ||||||
hg19:Y:22665177-C-A hg38:Y:20503291-C-A | *** | ||||||
hg19:Y:23007608-T-G hg38:Y:20845722-T-G | *** | ||||||
hg19:Y:23115281-C-A hg38:Y:20953395-C-A | *** | ||||||
hg19:Y:23191955-A-T hg38:Y:21030069-A-T | *** | ||||||
hg19:Y:23191956-T-G hg38:Y:21030070-T-G | *** | ||||||
hg19:Y:23191967-A-C hg38:Y:21030081-A-C | *** | ||||||
hg19:Y:23441155-C-A hg38:Y:21279269-C-A | *** | ||||||
hg19:Y:24878173-G-T hg38:Y:22732026-G-T | g1 | *** | |||||
hg38:Y:56827559-TTCC-T | *** | ||||||
hg38:Y:56838572-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 211188 | 9239619 | 7572284 | 7501390 |
Used in age calculations | 9239619 | 7572284 | 7501390 |
Counts of SNPs | 4 | 3 |
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