McCoy
BigY2: B80845MDKA Birth:
United States > PennsylvaniaTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B80845 |
|---|---|---|---|---|---|---|---|
| hg19:Y:22307882-T-A hg38:Y:20145996-T-A | DYZ19 | A* | |||||
| hg19:Y:21287545-GA-G hg38:Y:19125659-GA-G | 10×A | + | |||||
| hg19:Y:8285679-G-T hg38:Y:8417638-G-T | BY71410 | Y | Y | + | |||
| hg19:Y:15658308-TTAA-T hg38:Y:13546428-TTAA-T | + | ||||||
| hg19:Y:18217495-T-C hg38:Y:16105615-T-C | BY120943 | Y | + | ||||
| hg19:Y:18704973-G-T hg38:Y:16593093-G-T | BY123267 | Y | Y | + | |||
| hg19:Y:19091743-C-T hg38:Y:16979863-C-T | BY126183 | Y | Y | + | |||
| hg19:Y:19562867-A-G hg38:Y:17450987-A-G | BY129974 | Y | + | ||||
| hg19:Y:21396130-G-T hg38:Y:19234244-G-T | BY132573 | Y | Y | + | |||
| hg19:Y:28159218-T-TACAC hg38:Y:26013071-T-TACAC | P1_b4 | 17×AC | * | ||||
| hg19:Y:14884646-C-T hg38:Y:12772712-C-T | CTS3383 PF3716 | ** | |||||
| hg19:Y:14884659-A-C hg38:Y:12772725-A-C | CTS3384 PF3717 | ** | |||||
| hg19:Y:7853028-C-A hg38:Y:7984987-C-A | PF3645 V1476 | ** | |||||
| hg19:Y:13961890-G-A hg38:Y:11841184-G-A | PF3696 CTS1555 | ** | |||||
| hg19:Y:16351523-C-T hg38:Y:14239643-C-T | L495 Z2788 | ** | |||||
| hg19:Y:16972480-C-CA hg38:Y:14860600-C-CA | 8×A | ** | |||||
| hg19:Y:22459264-G-A hg38:Y:20297378-G-A | FGC7049 | DYZ19 | ** | ||||
| hg19:Y:4996843-C-T hg38:Y:5128802-C-T | FT322374 | ** | |||||
| hg19:Y:7723912-G-A hg38:Y:7855871-G-A | M1544 | ** | |||||
| hg19:Y:19073869-TAC-T hg38:Y:16961989-TAC-T | 10×AC | ** | |||||
| hg19:Y:15542136-C-A hg38:Y:13430256-C-A | ** | ||||||
| hg19:Y:9444995-C-A hg38:Y:9607386-C-A | ** | ||||||
| hg38:Y:11027300-C-G | ** | ||||||
| hg38:Y:11027323-T-G | ** | ||||||
| hg38:Y:11027324-T-G | ** | ||||||
| hg19:Y:19469877-ACCC-A hg38:Y:17357997-ACCC-A | 12×C | ** | |||||
| hg19:Y:16006677-G-T hg38:Y:13894797-G-T | ** | ||||||
| hg19:Y:24611463-TG-T hg38:Y:22465316-TG-T | P3_t2 | ** | |||||
| hg38:Y:10682574-T-A | ** | ||||||
| hg38:Y:11030739-C-T | FT440186 | ** | |||||
| hg38:Y:11015226-A-AC | ** | ||||||
| hg19:Y:9934590-C-A hg38:Y:10096981-C-A | ** | ||||||
| hg19:Y:21267926-C-A hg38:Y:19106040-C-A | ** | ||||||
| hg19:Y:21541431-GTT-G hg38:Y:19379545-GTT-G | 11×T | ** | |||||
| hg19:Y:16779181-C-A hg38:Y:14667301-C-A | ** | ||||||
| hg38:Y:11015249-C-A | ** | ||||||
| hg19:Y:15740773-C-A hg38:Y:13628893-C-A | ** | ||||||
| hg38:Y:10799428-C-A | ** | ||||||
| hg38:Y:11030732-C-G | ** | ||||||
| hg19:Y:27583214-G-GTT hg38:Y:25437067-G-GTT | P1_Y2 | 11×T | ** | ||||
| hg19:Y:18814810-C-A hg38:Y:16702930-C-A | ** | ||||||
| hg19:Y:17474730-C-A hg38:Y:15362850-C-A | ** | ||||||
| hg38:Y:10792779-A-G | ** | ||||||
| hg38:Y:10882972-C-A | ** | ||||||
| hg19:Y:16476217-C-A hg38:Y:14364337-C-A | ** | ||||||
| hg19:Y:5295867-G-T hg38:Y:5427826-G-T | ** | ||||||
| hg38:Y:11030784-T-A | ** | ||||||
| hg38:Y:11030786-C-T | ** | ||||||
| hg38:Y:11030806-C-A | ** | ||||||
| hg38:Y:11030807-A-G | ** | ||||||
| hg38:Y:10954317-A-T | ** | ||||||
| hg19:Y:24613959-TG-T hg38:Y:22467812-TG-T | P3_t2 | ** | |||||
| hg38:Y:10848046-G-T | ** | ||||||
| hg38:Y:10950490-T-A | ** | ||||||
| hg38:Y:10950496-C-G | ** | ||||||
| hg19:Y:9371492-AT-A hg38:Y:9533883-AT-A | ** | ||||||
| hg19:Y:7156769-C-A hg38:Y:7288728-C-A | ** | ||||||
| hg19:Y:28797799-A-G hg38:Y:26651652-A-G | ** | ||||||
| hg19:Y:28797807-G-T hg38:Y:26651660-G-T | ** | ||||||
| hg19:Y:21200866-C-A hg38:Y:19038980-C-A | ** | ||||||
| hg38:Y:10755023-G-A | BY83758 | ** | |||||
| hg38:Y:10980017-C-A | ** | ||||||
| hg38:Y:11030744-C-T | ** | ||||||
| hg38:Y:11030749-C-A | ** | ||||||
| hg38:Y:11030819-C-G | ** | ||||||
| hg38:Y:10848041-T-TC | ** | ||||||
| hg19:Y:21149579-TAGG-T hg38:Y:18987693-TAGG-T | ** | ||||||
| hg19:Y:13457666-C-A hg38:Y:11301990-C-A | ** | ||||||
| hg38:Y:10955275-C-A | ** | ||||||
| hg38:Y:10955309-T-G | ** | ||||||
| hg19:Y:13229646-C-A hg38:Y:11073970-C-A | ** | ||||||
| hg38:Y:10971903-A-T | ** | ||||||
| hg38:Y:10958191-C-A | ** | ||||||
| hg38:Y:10895789-T-G | ** | ||||||
| hg19:Y:19071775-C-A hg38:Y:16959895-C-A | ** | ||||||
| hg38:Y:11017685-C-A | ** | ||||||
| hg19:Y:17177300-C-A hg38:Y:15065420-C-A | ** | ||||||
| hg38:Y:10666283-CTCCAT-C | ** | ||||||
| hg19:Y:18982584-A-T hg38:Y:16870704-A-T | ** | ||||||
| hg38:Y:10744313-A-T | ** | ||||||
| hg19:Y:19000226-C-A hg38:Y:16888346-C-A | ** | ||||||
| hg38:Y:10977170-C-A | FT438884 | ** | |||||
| hg38:Y:11001786-C-A | ** | ||||||
| hg38:Y:11027091-G-A | ** | ||||||
| hg19:Y:15649810-C-A hg38:Y:13537930-C-A | ** | ||||||
| hg19:Y:18615982-C-A hg38:Y:16504102-C-A | ** | ||||||
| hg38:Y:10653994-C-A | ** | ||||||
| hg38:Y:11015273-T-C | ** | ||||||
| hg19:Y:9127503-G-T hg38:Y:9289894-G-T | ** | ||||||
| hg19:Y:8452174-C-A hg38:Y:8584133-C-A | ** | ||||||
| hg38:Y:10798207-T-A | ** | ||||||
| hg19:Y:15338941-C-A hg38:Y:13227059-C-A | ** | ||||||
| hg19:Y:3285154-G-T hg38:Y:3417113-G-T | ** | ||||||
| hg38:Y:10847105-C-G | ** | ||||||
| hg19:Y:3274648-C-A hg38:Y:3406607-C-A | ** | ||||||
| hg38:Y:10799469-C-T | ** | ||||||
| hg38:Y:11015180-C-A | ** | ||||||
| hg19:Y:8214971-C-A hg38:Y:8346930-C-A | FTB17206 | ** | |||||
| hg19:Y:21164754-C-A hg38:Y:19002868-C-A | ** | ||||||
| hg19:Y:18670171-C-A hg38:Y:16558291-C-A | ** | ||||||
| hg19:Y:28782772-C-A hg38:Y:26636625-C-A | ** | ||||||
| hg19:Y:8238305-C-A hg38:Y:8370264-C-A | ** | ||||||
| hg19:Y:14431651-G-T hg38:Y:12310924-G-T | ** | ||||||
| hg19:Y:16180207-C-A hg38:Y:14068327-C-A | ** | ||||||
| hg19:Y:22065224-C-A hg38:Y:19903338-C-A | ** | ||||||
| hg19:Y:6519744-C-A hg38:Y:6651703-C-A | ** | ||||||
| hg38:Y:11029755-C-A | ** | ||||||
| hg19:Y:21627103-C-T hg38:Y:19465217-C-T | ** | ||||||
| hg19:Y:6368395-C-A hg38:Y:6500354-C-A | ** | ||||||
| hg19:Y:18253141-T-A hg38:Y:16141261-T-A | FGC51435 | ** | |||||
| hg38:Y:10775984-C-G | ** | ||||||
| hg19:Y:21996432-G-T hg38:Y:19834546-G-T | ** | ||||||
| hg38:Y:11651942-G-T | DYZ17 | ** | |||||
| hg19:Y:18754760-C-A hg38:Y:16642880-C-A | ** | ||||||
| hg19:Y:7240565-C-A hg38:Y:7372524-C-A | ** | ||||||
| hg38:Y:10772685-G-A | ** | ||||||
| hg38:Y:10661978-A-C | ** | ||||||
| hg38:Y:10744311-C-T | ** | ||||||
| hg19:Y:7866739-C-A hg38:Y:7998698-C-A | ** | ||||||
| hg38:Y:11015231-TTTCAC-T | ** | ||||||
| hg19:Y:17038339-C-A hg38:Y:14926459-C-A | ** | ||||||
| hg19:Y:2708081-C-T hg38:Y:2840040-C-T | ** | ||||||
| hg19:Y:2708094-A-G hg38:Y:2840053-A-G | ** | ||||||
| hg19:Y:2708097-A-G hg38:Y:2840056-A-G | ** | ||||||
| hg38:Y:10803991-T-A | ** | ||||||
| hg19:Y:17090631-C-A hg38:Y:14978751-C-A | ** | ||||||
| hg19:Y:5710419-C-A hg38:Y:5842378-C-A | ** | ||||||
| hg19:Y:13454367-C-A hg38:Y:11298691-C-A | ** | ||||||
| hg38:Y:10798413-C-A | ** | ||||||
| hg19:Y:16516503-C-A hg38:Y:14404623-C-A | ** | ||||||
| hg19:Y:18872200-C-A hg38:Y:16760320-C-A | ** | ||||||
| hg38:Y:10983117-TTTCCATTCCC-T | ** | ||||||
| hg19:Y:9231552-G-T hg38:Y:9393943-G-T | ** | ||||||
| hg19:Y:9093367-T-G hg38:Y:9255758-T-G | ** | ||||||
| hg19:Y:23128898-C-A hg38:Y:20967012-C-A | ** | ||||||
| hg19:Y:22295635-C-A hg38:Y:20133749-C-A | DYZ19 | ** | |||||
| hg38:Y:10756116-C-A | ** | ||||||
| hg19:Y:21503145-C-A hg38:Y:19341259-C-A | ** | ||||||
| hg38:Y:10925383-C-G | ** | ||||||
| hg19:Y:22170446-G-T hg38:Y:20008560-G-T | ** | ||||||
| hg19:Y:8849691-C-A hg38:Y:8981650-C-A | ** | ||||||
| hg19:Y:21658535-C-A hg38:Y:19496649-C-A | ** | ||||||
| hg38:Y:10792784-A-T | ** | ||||||
| hg38:Y:56828200-T-A | ** | ||||||
| hg19:Y:14762542-C-A hg38:Y:12650611-C-A | ** | ||||||
| hg19:Y:15156997-C-A hg38:Y:13045084-C-A | ** | ||||||
| hg38:Y:10798224-T-G | ** | ||||||
| hg19:Y:16706290-G-T hg38:Y:14594410-G-T | ** | ||||||
| hg19:Y:18738096-CTT-C hg38:Y:16626216-CTT-C | 11×T | ** | |||||
| hg19:Y:21162421-C-A hg38:Y:19000535-C-A | ** | ||||||
| hg19:Y:2855450-C-A hg38:Y:2987409-C-A | ** | ||||||
| hg38:Y:10799459-T-A | ** | ||||||
| hg19:Y:16034161-C-A hg38:Y:13922281-C-A | ** | ||||||
| hg19:Y:8052558-C-A hg38:Y:8184517-C-A | ** | ||||||
| hg19:Y:15475233-T-G hg38:Y:13363353-T-G | ** | ||||||
| hg19:Y:17211103-C-A hg38:Y:15099223-C-A | ** | ||||||
| hg19:Y:9979217-A-C hg38:Y:10141608-A-C | ** | ||||||
| hg19:Y:9625869-GT-G hg38:Y:9788260-GT-G | IR3_Prx | ** | |||||
| hg19:Y:8631383-CTTTTTTTTT-C hg38:Y:8763342-CTTTTTTTTT-C | 26×T | ** | |||||
| hg19:Y:7724754-C-A hg38:Y:7856713-C-A | ** | ||||||
| hg19:Y:14910818-T-G hg38:Y:12798885-T-G | ** | ||||||
| hg19:Y:7820944-C-A hg38:Y:7952903-C-A | ** | ||||||
| hg19:Y:17323419-G-A hg38:Y:15211539-G-A | ** | ||||||
| hg38:Y:10770175-C-A | ** | ||||||
| hg38:Y:10843868-C-A | ** | ||||||
| hg38:Y:10775979-C-G | ** | ||||||
| hg19:Y:13989152-C-A hg38:Y:11868446-C-A | ** | ||||||
| hg19:Y:14700131-C-A hg38:Y:12588197-C-A | ** | ||||||
| hg19:Y:28726112-C-A hg38:Y:26579965-C-A | ** | ||||||
| hg19:Y:14767936-T-C hg38:Y:12656005-T-C | ** | ||||||
| hg19:Y:5289152-G-T hg38:Y:5421111-G-T | ** | ||||||
| hg19:Y:22018887-C-A hg38:Y:19857001-C-A | ** | ||||||
| hg38:Y:11015217-C-T | ** | ||||||
| hg19:Y:2805528-TCAA-T hg38:Y:2937487-TCAA-T | ** | ||||||
| hg38:Y:10744301-C-T | ** | ||||||
| hg19:Y:14661691-C-A hg38:Y:12549756-C-A | ** | ||||||
| hg19:Y:21624624-C-A hg38:Y:19462738-C-A | ** | ||||||
| hg19:Y:15870681-C-A hg38:Y:13758801-C-A | ** | ||||||
| hg19:Y:2708082-A-G hg38:Y:2840041-A-G | ** | ||||||
| hg19:Y:2708088-A-T hg38:Y:2840047-A-T | ** | ||||||
| hg19:Y:2708105-T-A hg38:Y:2840064-T-A | ** | ||||||
| hg19:Y:2708114-G-C hg38:Y:2840073-G-C | ** | ||||||
| hg19:Y:2708115-T-C hg38:Y:2840074-T-C | ** | ||||||
| hg19:Y:2752552-C-A hg38:Y:2884511-C-A | ** | ||||||
| hg19:Y:2800663-C-A hg38:Y:2932622-C-A | ** | ||||||
| hg19:Y:2824072-T-G hg38:Y:2956031-T-G | ** | ||||||
| hg19:Y:2862908-AAAT-A hg38:Y:2994867-AAAT-A | ** | ||||||
| hg19:Y:3328667-G-A hg38:Y:3460626-G-A | ** | ||||||
| hg19:Y:3455565-G-T hg38:Y:3587524-G-T | ** | ||||||
| hg19:Y:3491438-G-T hg38:Y:3623397-G-T | ** | ||||||
| hg19:Y:3704826-C-A hg38:Y:3836785-C-A | ** | ||||||
| hg19:Y:3961334-C-A hg38:Y:4093293-C-A | ** | ||||||
| hg19:Y:4075123-C-A hg38:Y:4207082-C-A | ** | ||||||
| hg19:Y:4093561-G-A hg38:Y:4225520-G-A | ** | ||||||
| hg19:Y:4270869-G-T hg38:Y:4402828-G-T | ** | ||||||
| hg19:Y:4366415-C-A hg38:Y:4498374-C-A | ** | ||||||
| hg19:Y:4393122-G-T hg38:Y:4525081-G-T | ** | ||||||
| hg19:Y:4952060-C-A hg38:Y:5084019-C-A | ** | ||||||
| hg19:Y:5318199-G-A hg38:Y:5450158-G-A | ** | ||||||
| hg19:Y:5819792-C-A hg38:Y:5951751-C-A | ** | ||||||
| hg19:Y:6134746-C-T hg38:Y:6266705-C-T | ** | ||||||
| hg19:Y:6233512-G-T hg38:Y:6365471-G-T | IR3_Dst | ** | |||||
| hg19:Y:6329441-G-T hg38:Y:6461400-G-T | IR3_Dst | ** | |||||
| hg19:Y:6490754-C-A hg38:Y:6622713-C-A | ** | ||||||
| hg19:Y:6602894-G-T hg38:Y:6734853-G-T | ** | ||||||
| hg19:Y:6631344-C-G hg38:Y:6763303-C-G | ** | ||||||
| hg19:Y:6694133-G-A hg38:Y:6826092-G-A | ** | ||||||
| hg19:Y:6948188-C-A hg38:Y:7080147-C-A | ** | ||||||
| hg19:Y:7028830-T-C hg38:Y:7160789-T-C | ** | ||||||
| hg19:Y:7092306-C-A hg38:Y:7224265-C-A | ** | ||||||
| hg19:Y:7095720-C-A hg38:Y:7227679-C-A | ** | ||||||
| hg19:Y:7104243-C-A hg38:Y:7236202-C-A | ** | ||||||
| hg19:Y:7146228-G-C hg38:Y:7278187-G-C | ** | ||||||
| hg19:Y:7281698-C-A hg38:Y:7413657-C-A | ** | ||||||
| hg19:Y:7301694-G-T hg38:Y:7433653-G-T | ** | ||||||
| hg19:Y:7325743-C-A hg38:Y:7457702-C-A | ** | ||||||
| hg19:Y:7432476-C-A hg38:Y:7564435-C-A | ** | ||||||
| hg19:Y:7853086-C-A hg38:Y:7985045-C-A | ** | ||||||
| hg19:Y:7863292-C-A hg38:Y:7995251-C-A | ** | ||||||
| hg19:Y:7898351-C-A hg38:Y:8030310-C-A | ** | ||||||
| hg19:Y:8155782-G-A hg38:Y:8287741-G-A | BY164316 | ** | |||||
| hg19:Y:8169372-T-A hg38:Y:8301331-T-A | ** | ||||||
| hg19:Y:8342919-G-A hg38:Y:8474878-G-A | ** | ||||||
| hg19:Y:8513548-A-C hg38:Y:8645507-A-C | ** | ||||||
| hg19:Y:8635973-G-T hg38:Y:8767932-G-T | ** | ||||||
| hg19:Y:8979192-C-A hg38:Y:9141583-C-A | ** | ||||||
| hg19:Y:9030439-G-A hg38:Y:9192830-G-A | ** | ||||||
| hg19:Y:9378088-C-A hg38:Y:9540479-C-A | ** | ||||||
| hg19:Y:9396397-A-G hg38:Y:9558788-A-G | ** | ||||||
| hg19:Y:9444936-T-G hg38:Y:9607327-T-G | ** | ||||||
| hg19:Y:9454424-C-A hg38:Y:9616815-C-A | ** | ||||||
| hg19:Y:9512969-T-G hg38:Y:9675360-T-G | ** | ||||||
| hg19:Y:9622374-GT-G hg38:Y:9784765-GT-G | IR3_Prx | ** | |||||
| hg19:Y:9870188-G-T hg38:Y:10032579-G-T | ** | ||||||
| hg19:Y:9877220-G-T hg38:Y:10039611-G-T | ** | ||||||
| hg19:Y:9880465-C-A hg38:Y:10042856-C-A | ** | ||||||
| hg19:Y:9979262-C-A hg38:Y:10141653-C-A | ** | ||||||
| hg19:Y:10017848-C-A hg38:Y:10180239-C-A | ** | ||||||
| hg38:Y:10755006-C-CAGATT | ** | ||||||
| hg38:Y:10772688-CTCCAT-C | ** | ||||||
| hg38:Y:10798230-CCATTG-C | ** | ||||||
| hg38:Y:10798241-C-G | ** | ||||||
| hg38:Y:10798254-T-G | ** | ||||||
| hg38:Y:10799455-T-C | ** | ||||||
| hg38:Y:10803989-T-CCC | ** | ||||||
| hg38:Y:10803993-ATC-A | ** | ||||||
| hg38:Y:10818772-G-T | ** | ||||||
| hg38:Y:10828242-C-A | ** | ||||||
| hg38:Y:10840501-C-A | ** | ||||||
| hg38:Y:10875252-TTCCAC-T | ** | ||||||
| hg38:Y:10901044-C-A | ** | ||||||
| hg38:Y:10901138-C-A | ** | ||||||
| hg38:Y:10902179-C-G | ** | ||||||
| hg38:Y:10925378-C-T | ** | ||||||
| hg38:Y:10925413-C-G | ** | ||||||
| hg38:Y:10936883-ATTACC-A | ** | ||||||
| hg38:Y:10959255-C-T | FT191094 | ** | |||||
| hg38:Y:10991709-C-A | ** | ||||||
| hg38:Y:10993198-C-A | ** | ||||||
| hg38:Y:11015165-CATTAT-C | ** | ||||||
| hg38:Y:11015558-A-G | ** | ||||||
| hg38:Y:11015583-A-T | ** | ||||||
| hg38:Y:11015587-T-C | ** | ||||||
| hg38:Y:11015591-C-G | ** | ||||||
| hg19:Y:13237479-G-T hg38:Y:11081803-G-T | ** | ||||||
| hg19:Y:13479645-T-A hg38:Y:11323969-T-A | ** | ||||||
| hg19:Y:13584222-C-A hg38:Y:11428546-C-A | ** | ||||||
| hg19:Y:13598936-G-T hg38:Y:11443260-G-T | ** | ||||||
| hg19:Y:13612571-A-G hg38:Y:11456895-A-G | ** | ||||||
| hg38:Y:11663723-A-G | DYZ17 | ** | |||||
| hg19:Y:13883621-C-A hg38:Y:11762915-C-A | ** | ||||||
| hg19:Y:13944797-C-A hg38:Y:11824091-C-A | ** | ||||||
| hg19:Y:14040913-G-A hg38:Y:11920207-G-A | ** | ||||||
| hg19:Y:14069894-C-A hg38:Y:11949188-C-A | ** | ||||||
| hg19:Y:14093387-T-G hg38:Y:11972681-T-G | ** | ||||||
| hg19:Y:14125088-C-A hg38:Y:12004382-C-A | ** | ||||||
| hg19:Y:14212818-C-A hg38:Y:12092112-C-A | ** | ||||||
| hg19:Y:14215060-G-T hg38:Y:12094354-G-T | ** | ||||||
| hg19:Y:14295227-C-A hg38:Y:12174521-C-A | ** | ||||||
| hg19:Y:14318337-T-G hg38:Y:12197631-T-G | ** | ||||||
| hg19:Y:14371369-G-T hg38:Y:12250665-G-T | ** | ||||||
| hg19:Y:14461165-A-G hg38:Y:12340438-A-G | ** | ||||||
| hg19:Y:14464503-G-T hg38:Y:12343776-G-T | ** | ||||||
| hg19:Y:14478824-C-A hg38:Y:12358093-C-A | ** | ||||||
| hg19:Y:14518365-A-T hg38:Y:12406566-A-T | ** | ||||||
| hg19:Y:14562851-G-A hg38:Y:12451051-G-A | ** | ||||||
| hg19:Y:14608260-T-A hg38:Y:12496462-T-A | ** | ||||||
| hg19:Y:14660295-A-C hg38:Y:12548360-A-C | ** | ||||||
| hg19:Y:14743161-A-AT hg38:Y:12631229-A-AT | ** | ||||||
| hg19:Y:14767908-T-C hg38:Y:12655977-T-C | ** | ||||||
| hg19:Y:14767926-A-G hg38:Y:12655995-A-G | ** | ||||||
| hg19:Y:14767937-G-A hg38:Y:12656006-G-A | ** | ||||||
| hg19:Y:14819205-C-A hg38:Y:12707272-C-A | ** | ||||||
| hg19:Y:14825159-G-T hg38:Y:12713226-G-T | ** | ||||||
| hg19:Y:14998646-A-C hg38:Y:12886731-A-C | ** | ||||||
| hg19:Y:15045707-T-A hg38:Y:12933797-T-A | ** | ||||||
| hg19:Y:15059728-CT-C hg38:Y:12947820-CT-C | ** | ||||||
| hg19:Y:15059766-C-T hg38:Y:12947858-C-T | ** | ||||||
| hg19:Y:15221741-C-A hg38:Y:13109827-C-A | ** | ||||||
| hg19:Y:15287125-C-A hg38:Y:13175224-C-A | ** | ||||||
| hg19:Y:15387871-T-A hg38:Y:13275991-T-A | ** | ||||||
| hg19:Y:15467838-C-A hg38:Y:13355958-C-A | ** | ||||||
| hg19:Y:15491169-C-A hg38:Y:13379289-C-A | ** | ||||||
| hg19:Y:15500699-C-A hg38:Y:13388819-C-A | ** | ||||||
| hg19:Y:15536439-A-T hg38:Y:13424559-A-T | ** | ||||||
| hg19:Y:15657994-A-T hg38:Y:13546114-A-T | ** | ||||||
| hg19:Y:15677804-G-C hg38:Y:13565924-G-C | ** | ||||||
| hg19:Y:15882553-A-G hg38:Y:13770673-A-G | ** | ||||||
| hg19:Y:15932485-A-C hg38:Y:13820605-A-C | ** | ||||||
| hg19:Y:16076019-A-C hg38:Y:13964139-A-C | ** | ||||||
| hg19:Y:16085830-A-T hg38:Y:13973950-A-T | ** | ||||||
| hg19:Y:16192698-C-A hg38:Y:14080818-C-A | ** | ||||||
| hg19:Y:16384926-T-G hg38:Y:14273046-T-G | ** | ||||||
| hg19:Y:16457820-C-A hg38:Y:14345940-C-A | ** | ||||||
| hg19:Y:16553977-T-C hg38:Y:14442097-T-C | ** | ||||||
| hg19:Y:16602521-A-C hg38:Y:14490641-A-C | ** | ||||||
| hg19:Y:16612700-C-A hg38:Y:14500820-C-A | ** | ||||||
| hg19:Y:16714682-C-T hg38:Y:14602802-C-T | ** | ||||||
| hg19:Y:16760062-T-G hg38:Y:14648182-T-G | ** | ||||||
| hg19:Y:16813929-C-A hg38:Y:14702049-C-A | ** | ||||||
| hg19:Y:16878267-C-A hg38:Y:14766387-C-A | ** | ||||||
| hg19:Y:17039229-C-A hg38:Y:14927349-C-A | ** | ||||||
| hg19:Y:17096261-C-A hg38:Y:14984381-C-A | ** | ||||||
| hg19:Y:17279478-C-A hg38:Y:15167598-C-A | ** | ||||||
| hg19:Y:17305323-C-A hg38:Y:15193443-C-A | ** | ||||||
| hg19:Y:17879614-A-C hg38:Y:15767734-A-C | ** | ||||||
| hg19:Y:17941616-C-A hg38:Y:15829736-C-A | ** | ||||||
| hg19:Y:18188548-G-T hg38:Y:16076668-G-T | ** | ||||||
| hg19:Y:18195778-C-A hg38:Y:16083898-C-A | ** | ||||||
| hg19:Y:18246454-G-T hg38:Y:16134574-G-T | ** | ||||||
| hg19:Y:18365606-C-A hg38:Y:16253726-C-A | P6_Prx | ** | |||||
| hg19:Y:18581770-T-C hg38:Y:16469890-T-C | ** | ||||||
| hg19:Y:18703209-C-A hg38:Y:16591329-C-A | ** | ||||||
| hg19:Y:18718796-A-G hg38:Y:16606916-A-G | ** | ||||||
| hg19:Y:18737565-CT-C hg38:Y:16625685-CT-C | ** | ||||||
| hg19:Y:18762529-T-C hg38:Y:16650649-T-C | ** | ||||||
| hg19:Y:18777493-C-A hg38:Y:16665613-C-A | ** | ||||||
| hg19:Y:18837558-C-A hg38:Y:16725678-C-A | ** | ||||||
| hg19:Y:18932863-C-A hg38:Y:16820983-C-A | ** | ||||||
| hg19:Y:19041468-G-T hg38:Y:16929588-G-T | ** | ||||||
| hg19:Y:19079335-C-A hg38:Y:16967455-C-A | ** | ||||||
| hg19:Y:19110022-C-A hg38:Y:16998142-C-A | ** | ||||||
| hg19:Y:19124955-G-A hg38:Y:17013075-G-A | ** | ||||||
| hg19:Y:19172811-T-G hg38:Y:17060931-T-G | ** | ||||||
| hg19:Y:19216424-T-G hg38:Y:17104544-T-G | ** | ||||||
| hg19:Y:19394208-A-C hg38:Y:17282328-A-C | ** | ||||||
| hg19:Y:19464814-G-T hg38:Y:17352934-G-T | ** | ||||||
| hg19:Y:19465928-C-G hg38:Y:17354048-C-G | ** | ||||||
| hg19:Y:19500504-C-T hg38:Y:17388624-C-T | ** | ||||||
| hg19:Y:19558028-T-C hg38:Y:17446148-T-C | ** | ||||||
| hg19:Y:20614762-T-C hg38:Y:18452876-T-C | P4_Prx | ** | |||||
| hg19:Y:21314419-C-T hg38:Y:19152533-C-T | ** | ||||||
| hg19:Y:21370303-A-G hg38:Y:19208417-A-G | ** | ||||||
| hg19:Y:21425177-C-A hg38:Y:19263291-C-A | ** | ||||||
| hg19:Y:21650943-A-C hg38:Y:19489057-A-C | ** | ||||||
| hg19:Y:21651792-C-A hg38:Y:19489906-C-A | ** | ||||||
| hg19:Y:21875765-G-T hg38:Y:19713879-G-T | ** | ||||||
| hg19:Y:22037364-G-A hg38:Y:19875478-G-A | ** | ||||||
| hg19:Y:22070412-TCCAAA-T hg38:Y:19908526-TCCAAA-T | ** | ||||||
| hg19:Y:22113441-A-T hg38:Y:19951555-A-T | ** | ||||||
| hg19:Y:22124068-C-A hg38:Y:19962182-C-A | ** | ||||||
| hg19:Y:22143147-A-T hg38:Y:19981261-A-T | ** | ||||||
| hg19:Y:22143156-C-A hg38:Y:19981270-C-A | ** | ||||||
| hg19:Y:22169627-G-T hg38:Y:20007741-G-T | ** | ||||||
| hg19:Y:22202066-C-A hg38:Y:20040180-C-A | ** | ||||||
| hg19:Y:22457416-A-C hg38:Y:20295530-A-C | DYZ19 | ** | |||||
| hg19:Y:22480634-T-C hg38:Y:20318748-T-C | DYZ19 | ** | |||||
| hg19:Y:22585377-C-A hg38:Y:20423491-C-A | ** | ||||||
| hg19:Y:22611385-G-T hg38:Y:20449499-G-T | ** | ||||||
| hg19:Y:22653286-C-T hg38:Y:20491400-C-T | FT189151 | ** | |||||
| hg19:Y:22703595-CAAAAA-C hg38:Y:20541709-CAAAAA-C | 30×A | ** | |||||
| hg19:Y:22720524-T-A hg38:Y:20558638-T-A | ** | ||||||
| hg19:Y:22855334-T-C hg38:Y:20693448-T-C | ** | ||||||
| hg19:Y:23010970-G-T hg38:Y:20849084-G-T | ** | ||||||
| hg19:Y:23099835-C-A hg38:Y:20937949-C-A | ** | ||||||
| hg19:Y:23167747-C-A hg38:Y:21005861-C-A | FT134946 | ** | |||||
| hg19:Y:23609587-C-A hg38:Y:21447701-C-A | ** | ||||||
| hg19:Y:23625653-CA-C hg38:Y:21463767-CA-C | ** | ||||||
| hg19:Y:23745117-G-T hg38:Y:21583231-G-T | ** | ||||||
| hg19:Y:23791979-C-A hg38:Y:21630093-C-A | ** | ||||||
| hg19:Y:23808651-G-T hg38:Y:21646765-G-T | ** | ||||||
| hg19:Y:23824179-C-A hg38:Y:21662293-C-A | ** | ||||||
| hg19:Y:23955018-C-A hg38:Y:21808871-C-A | ** | ||||||
| hg19:Y:24310307-AT-A hg38:Y:22164160-AT-A | P3_t1 | ** | |||||
| hg19:Y:24364036-T-C hg38:Y:22217889-T-C | ** | ||||||
| hg19:Y:24404163-C-A hg38:Y:22258016-C-A | ** | ||||||
| hg19:Y:24405915-G-T hg38:Y:22259768-G-T | ** | ||||||
| hg19:Y:25521479-T-G hg38:Y:23375332-T-G | P1_gr1 | ** | |||||
| hg19:Y:27570848-A-G hg38:Y:25424701-A-G | P1_Y2 | ** | |||||
| hg19:Y:28461551-C-A hg38:Y:26315404-C-A | ** | ||||||
| hg19:Y:28510849-C-A hg38:Y:26364702-C-A | ** | ||||||
| hg19:Y:28635527-T-G hg38:Y:26489380-T-G | ** | ||||||
| hg19:Y:28756962-C-A hg38:Y:26610815-C-A | ** | ||||||
| hg38:Y:56828136-T-G | ** | ||||||
| hg38:Y:56828186-T-C | ** | ||||||
| hg38:Y:56828204-A-G | ** | ||||||
| hg38:Y:56828205-A-T | ** | ||||||
| hg38:Y:56846584-C-A | ** | ||||||
| hg19:Y:19369221-TA-T hg38:Y:17257341-TA-T | 11×A | *** | |||||
| hg19:Y:19073940-TAC-T hg38:Y:16962060-TAC-T | *** | ||||||
| hg19:Y:58977253-C-A hg38:Y:56831106-C-A | *** | ||||||
| hg19:Y:13456837-TATTCC-T hg38:Y:11301161-TATTCC-T | 7×ATTCC | *** | |||||
| hg19:Y:8350832-C-A hg38:Y:8482791-C-A | BY17525 | BY20655 | *** | ||||
| hg19:Y:14821877-CAA-C hg38:Y:12709944-CAA-C | 11×A | *** | |||||
| hg19:Y:7970855-C-A hg38:Y:8102814-C-A | *** | ||||||
| hg38:Y:11015905-T-A | *** | ||||||
| hg38:Y:11001963-C-A | *** | ||||||
| hg19:Y:13468260-C-G hg38:Y:11312584-C-G | *** | ||||||
| hg19:Y:15588715-CA-C,CAA hg38:Y:13476835-CA-C,CAA | 14×A | *** | |||||
| hg19:Y:15619600-C-A hg38:Y:13507720-C-A | *** | ||||||
| hg19:Y:13468271-G-A hg38:Y:11312595-G-A | *** | ||||||
| hg19:Y:17873630-C-A hg38:Y:15761750-C-A | *** | ||||||
| hg38:Y:10934842-C-G | *** | ||||||
| hg38:Y:10844180-C-T | *** | ||||||
| hg19:Y:22579984-C-A hg38:Y:20418098-C-A | *** | ||||||
| hg19:Y:8158056-C-A hg38:Y:8290015-C-A | *** | ||||||
| hg38:Y:10934841-T-G | *** | ||||||
| hg19:Y:5084594-C-A hg38:Y:5216553-C-A | *** | ||||||
| hg19:Y:22792919-C-A hg38:Y:20631033-C-A | *** | ||||||
| hg19:Y:8398836-C-A hg38:Y:8530795-C-A | *** | ||||||
| hg19:Y:13468269-G-T hg38:Y:11312593-G-T | *** | ||||||
| hg19:Y:15250862-A-T hg38:Y:13138948-A-T | *** | ||||||
| hg19:Y:7342066-G-T hg38:Y:7474025-G-T | *** | ||||||
| hg38:Y:56742657-G-T | *** | ||||||
| hg19:Y:9457435-C-A hg38:Y:9619826-C-A | *** | ||||||
| hg19:Y:2803844-C-A hg38:Y:2935803-C-A | *** | ||||||
| hg19:Y:18414108-C-A hg38:Y:16302228-C-A | P6_Gap | *** | |||||
| hg19:Y:15011128-C-A hg38:Y:12899213-C-A | *** | ||||||
| hg19:Y:15250847-C-A hg38:Y:13138933-C-A | *** | ||||||
| hg19:Y:2746643-G-A hg38:Y:2878602-G-A | BY192925 | *** | |||||
| hg19:Y:3713505-C-A hg38:Y:3845464-C-A | *** | ||||||
| hg19:Y:6085551-C-A hg38:Y:6217510-C-A | *** | ||||||
| hg19:Y:6787168-C-A hg38:Y:6919127-C-A | *** | ||||||
| hg19:Y:7184090-C-A hg38:Y:7316049-C-A | *** | ||||||
| hg19:Y:7226914-C-A hg38:Y:7358873-C-A | *** | ||||||
| hg19:Y:7365601-C-A hg38:Y:7497560-C-A | *** | ||||||
| hg19:Y:7508954-A-C hg38:Y:7640913-A-C | *** | ||||||
| hg19:Y:8024379-A-T hg38:Y:8156338-A-T | *** | ||||||
| hg19:Y:8090658-G-T hg38:Y:8222617-G-T | *** | ||||||
| hg19:Y:8428901-G-T hg38:Y:8560860-G-T | *** | ||||||
| hg19:Y:8721265-C-A hg38:Y:8853224-C-A | *** | ||||||
| hg19:Y:9104426-C-A hg38:Y:9266817-C-A | *** | ||||||
| hg19:Y:9857382-C-A hg38:Y:10019773-C-A | *** | ||||||
| hg19:Y:9864347-G-T hg38:Y:10026738-G-T | *** | ||||||
| hg38:Y:10934827-C-A,T | *** | ||||||
| hg38:Y:10975456-C-A | *** | ||||||
| hg19:Y:13319308-C-A hg38:Y:11163632-C-A | *** | ||||||
| hg19:Y:13463907-C-A,T hg38:Y:11308231-C-A,T | *** | ||||||
| hg38:Y:11643766-A-AAGAAT | DYZ17 | *** | |||||
| hg19:Y:14169261-C-A hg38:Y:12048555-C-A | *** | ||||||
| hg19:Y:14940229-C-A hg38:Y:12828303-C-A | *** | ||||||
| hg19:Y:14997602-CT-C hg38:Y:12885687-CT-C | *** | ||||||
| hg19:Y:15191330-C-A hg38:Y:13079416-C-A | *** | ||||||
| hg19:Y:15312000-C-A hg38:Y:13200105-C-A | *** | ||||||
| hg19:Y:15341883-C-A hg38:Y:13230002-C-A | *** | ||||||
| hg19:Y:16511308-C-A hg38:Y:14399428-C-A | *** | ||||||
| hg19:Y:16517521-C-A hg38:Y:14405641-C-A | *** | ||||||
| hg19:Y:16712069-A-G hg38:Y:14600189-A-G | *** | ||||||
| hg19:Y:16764547-C-A hg38:Y:14652667-C-A | *** | ||||||
| hg19:Y:16862585-AT-A hg38:Y:14750705-AT-A | 9×T | *** | |||||
| hg19:Y:16874000-C-A hg38:Y:14762120-C-A | *** | ||||||
| hg19:Y:17283113-GTT-G,GTTT hg38:Y:15171233-GTT-G,GTTT | 13×T | *** | |||||
| hg19:Y:17587627-C-A hg38:Y:15475747-C-A | *** | ||||||
| hg19:Y:17599200-C-A hg38:Y:15487320-C-A | *** | ||||||
| hg19:Y:18394326-CATGAAGA-C hg38:Y:16282446-CATGAAGA-C | P6_Gap | *** | |||||
| hg19:Y:18900077-G-T hg38:Y:16788197-G-T | 8×A | *** | |||||
| hg19:Y:18994849-A-G hg38:Y:16882969-A-G | FT261687 | 6×GAAG | *** | ||||
| hg19:Y:19415938-C-A hg38:Y:17304058-C-A | *** | ||||||
| hg19:Y:19509191-C-A hg38:Y:17397311-C-A | *** | ||||||
| hg19:Y:19525929-C-A hg38:Y:17414049-C-A | *** | ||||||
| hg19:Y:21477682-G-C hg38:Y:19315796-G-C | *** | ||||||
| hg19:Y:21762444-C-A hg38:Y:19600558-C-A | *** | ||||||
| hg19:Y:22036843-C-A hg38:Y:19874957-C-A | *** | ||||||
| hg19:Y:22127159-T-C hg38:Y:19965273-T-C | *** | ||||||
| hg19:Y:22935429-C-A hg38:Y:20773543-C-A | *** | ||||||
| hg19:Y:23022860-C-A hg38:Y:20860974-C-A | FT85253 | *** | |||||
| hg19:Y:23258097-C-A hg38:Y:21096211-C-A | *** | ||||||
| hg19:Y:23298159-C-T hg38:Y:21136273-C-T | *** | ||||||
| hg19:Y:23459177-C-A hg38:Y:21297291-C-A | *** | ||||||
| hg19:Y:23498984-C-A hg38:Y:21337098-C-A | *** | ||||||
| hg19:Y:23564845-A-G hg38:Y:21402959-A-G | *** | ||||||
| hg19:Y:23855704-G-T hg38:Y:21693818-G-T | *** | ||||||
| hg19:Y:24458497-G-T hg38:Y:22312350-G-T | *** | ||||||
| hg19:Y:28589751-C-A hg38:Y:26443604-C-A | *** | ||||||
| hg19:Y:28784495-G-C hg38:Y:26638348-G-C | *** | ||||||
| hg19:Y:28800602-C-A hg38:Y:26654455-C-A | *** | ||||||
| hg19:Y:28815981-C-T hg38:Y:26669834-C-T | *** | ||||||
| hg38:Y:56825900-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B80845 | 8685869 | 7137569 | 7085451 |
| Used in age calculations | 8685869 | 7137569 | 7085451 |
| Counts of SNPs | 5 | 5 |
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