Wickens

BigY2: 580876
MDKA Birth: United States > Ohio

Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > BY3548 > Z43/S366 > ~19904794-T-C > BY3544 > S1523 > BY770 > BY1738

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
580876
20730419-C-T 18568533-C-T P4_Prx A*
28816765-G-A 26670618-G-A A*
6317842-C-T 6449801-C-T IR3_Dst A*
20624710-A-G 18462824-A-G P4_Prx A*
19779655-C-T 17667775-C-T P5_Prx A*
25872683-C-T 23726536-C-T P1_Y1 A*
19752357-C-G 17640477-C-G P5_Prx A*
15917310-A-C 13805430-A-C BY104905 YY+
9102856-G-A 9265247-G-A BY78108 Y+
15220371-C-T 13108457-C-T Y+
21608870-G-A 19446984-G-A BY41515 YY+
19009523-T-C 16897643-T-C BY125510 YY+
6737728-A-T 6869687-A-T BY60979 YY+
14989469-T-G 12877554-T-G BY98940 YY+
6778786-G-T 6910745-G-T BY61238 YY+
21384086-G-A 19222200-G-A BY132475 YY+
9860094-T-C 10022485-T-C BY41507 YY+
17670194-C-T 15558314-C-T BY41511 YY+
6859023-T-G 6990982-T-G BY41503 YY+
19227288-T-C 17115408-T-C BY41513 YY+
8877879-T-A 9009838-T-A BY41506 Y+
7091581-T-G 7223540-T-G BY41504 YY+
14088504-G-T 11967798-G-T BY92907 Y+
8592354-G-A 8724313-G-A BY41505 YY+
15268505-G-T 13156594-G-T BY41508 YY+
20803724-C-T 18641838-C-T BY212385 P4_Gap +
15531036-G-T 13419156-G-T BY41510 YY+
23074004-A-AT 20912118-A-AT +
20736064-G-A 18574178-G-A BY41514 P4_Prx +
16610542-A-T 14498662-A-T BY108976 YY+
15536599-AAATAAAAAAACAGAGAGAGACAAGAGGACTG-A 13424719-AAATAAAAAAACAGAGAGAGACAAGAGGACTG-A +
18843523-G-A 16731643-G-A BY41512 YY+
19537602-G-A 17425722-G-A BY129891 YY+
22461351-G-T 20299465-G-T DYZ19 +
15335701-T-C 13223819-T-C BY41509 YY+
23097687-G-A 20935801-G-A BY142931 YY+
22302154-G-C 20140268-G-C DYZ19 *
14135342-C-A 12014636-C-A **
14159700-G-A 12038994-G-A **
14135185-G-T 12014479-G-T **
14165881-C-A 12045175-C-A **
14213814-A-T 12093108-A-T **
14284666-C-A 12163960-C-A **
14135144-T-C 12014438-T-C **
14297959-C-A 12177253-C-A **
14046673-C-G 11925967-C-G **
14118425-G-A 11997719-G-A **
13929148-C-A 11808442-C-A **
13855239-T-G 11734533-T-G **
13859121-AGTGGAAT-A 11738415-AGTGGAAT-A **
15986685-C-A 13874805-C-A **
13859380-ACATGG-C 11738674-ACATGG-C **
15982037-C-A 13870157-C-A **
13859401-A-T 11738695-A-T **
13916022-T-G 11795316-T-G **
13954591-A-G 11833885-A-G **
14101271-T-G 11980565-T-G **
15971304-C-T 13859424-C-T **
13961337-G-C 11840631-G-C **
14031885-T-A 11911179-T-A **
14300682-TA-T 12179976-TA-T **
14046694-A-G 11925988-A-G **
14055052-A-C 11934346-A-C **
14085973-C-A 11965267-C-A **
14098745-A-C 11978039-A-C **
14300540-C-A 12179834-C-A **
14513273-T-G 12401478-T-G **
14339512-T-A 12218807-T-A **
15290404-T-G 13178503-T-G **
14880229-C-T 12768299-C-T **
14914781-C-A 12802848-C-A **
14927224-A-G 12815289-A-G **
15931719-C-A 13819839-C-A **
15012660-G-T 12900748-G-T **
15073364-G-T 12961454-G-T **
15092549-A-T 12980638-A-T **
15092570-A-C 12980659-A-C **
15290431-G-T 13178530-G-T **
14880219-C-T 12768289-C-T **
15379922-G-T 13268042-G-T **
15431691-G-C 13319811-G-C **
15485488-A-G 13373608-A-G **
15570834-G-T 13458954-G-T **
15653380-G-C 13541500-G-C **
15740841-T-C 13628961-T-C **
15745912-A-C 13634032-A-C **
15767081-T-C 13655201-T-C **
15863012-T-C 13751132-T-C **
14880224-C-A 12768294-C-A **
14799996-A-G 12688067-A-G **
14366662-C-G 12245957-C-G **
11666086-T-A **
14366663-A-T 12245958-A-T **
14391828-C-T 12271124-C-T **
14459958-C-T 12339231-C-T **
14467706-C-A 12346975-C-A **
14474658-C-T 12353927-C-T **
14485488-C-T 12364757-C-T **
15894666-C-A 13782786-C-A **
14546571-A-C 12434772-A-C **
14584613-G-A 12472813-G-A **
14798617-T-G 12686688-T-G **
14620969-T-G 12509167-T-G **
14630441-C-A 12518510-C-A **
14668876-G-C 12556942-G-C **
14701362-G-C 12589428-G-C **
14757885-C-T 12645954-C-T **
14764913-AA-T 12652982-AA-T **
14766616-T-G 12654685-T-G **
14766617-T-C 12654686-T-C **
14785533-T-C 12673603-T-C **
14546875-G-A 12435076-G-A **
19492290-C-CAA 17380410-C-CAA 37×A**
11663504-C-A **
10876670-C-G **
10834607-A-C **
10839640-A-G **
10841201-C-A **
10847127-T-G **
10848918-A-T **
10861361-C-A **
10861375-C-A **
10873079-A-T **
10877316-T-G **
10830195-A-C **
10882636-C-G **
10889399-T-C **
10890351-C-A **
10893835-A-G **
10915727-G-T **
10918960-A-G **
10918974-T-A **
10919021-A-G **
10923795-C-A **
10833585-C-A **
10830172-T-C **
10925042-C-A **
10805101-G-T **
10764603-TC-T **
10764973-G-C **
27960966-TAAAA-T 25814819-TAAAA-T P1_Y2 18×A**
10769823-C-A **
10780951-T-G **
10780965-A-G **
10783053-A-C **
10790027-A-C **
10807846-A-C **
10828081-C-A **
10810872-A-C **
10811483-A-G **
10817956-A-T **
10823734-T-C **
10823771-CCACT-C **
10823789-C-T **
10823799-C-T **
10823801-CCG-C **
10824154-T-TTGCAC **
10924323-A-G **
10925493-C-T **
11651733-A-G **
13460603-A-C 11304927-A-C **
11015320-A-C **
11025083-C-T **
11031657-A-T **
11031840-C-A **
11035945-C-T **
13292596-T-A 11136920-T-A **
13330255-G-T 11174579-G-T **
13412482-C-A 11256806-C-A **
13502439-C-A 11346763-C-A **
11006285-G-T **
13523591-C-A 11367915-C-A **
13566722-G-T 11411046-G-T **
16019101-G-A 13907221-G-A **
13585090-T-G 11429414-T-G **
13610801-C-A 11455125-C-A **
13639256-T-G 11483580-T-G **
13642266-A-T 11486590-A-T **
13743010-G-A 11587334-G-A **
13743022-A-T 11587346-A-T **
11013507-C-A **
11004025-C-A **
10926812-A-G **
10968763-T-A **
10933887-C-A **
10938426-C-A **
10947120-A-C **
10951587-C-G **
10951600-T-A **
10956541-T-TTCCAC **
10956545-T-C **
10961210-C-T **
10980012-T-C **
11001969-A-C **
10984491-A-G **
10988096-G-T **
10991461-T-A **
10991985-G-C **
10992002-C-T **
10992419-G-T **
10992652-C-T **
10995648-C-A **
10996570-C-T **
16018246-C-A 13906366-C-A **
16426250-C-A 14314370-C-A **
16070801-A-C 13958921-A-C **
22088808-G-T 19926922-G-T **
21770478-C-A 19608592-C-A **
21770726-G-C 19608840-G-C **
21809887-AG-A 19648001-AG-A **
21885757-A-C 19723871-A-C **
21924037-G-C 19762151-G-C **
21935188-T-A 19773302-T-A **
21969477-A-T 19807591-A-T **
22041637-G-T 19879751-G-T **
22171332-T-A 20009446-T-A **
21694886-A-G 19533000-A-G **
22229557-G-A 20067671-G-A DYZ19 **
22447020-G-T 20285134-G-T DYZ19 **
22447652-C-G 20285766-C-G DYZ19 **
22517128-A-G 20355242-A-G **
22521951-C-A 20360065-C-A **
22537154-T-A 20375268-T-A **
22587028-A-T 20425142-A-T **
22587052-A-T 20425166-A-T **
22809893-TG-T 20648007-TG-T **
21770454-C-T 19608568-C-T **
21677355-TC-T 19515469-TC-T **
22857781-T-G 20695895-T-G **
21141389-T-G 18979503-T-G **
20840744-G-C 18678858-G-C P4_Gap **
20840748-A-AG 18678862-A-AG P4_Gap **
20840751-CT-C 18678865-CT-C P4_Gap **
20840762-G-A 18678876-G-A P4_Gap **
20888599-A-G 18726713-A-G P4_Dst **
21042930-G-T 18881044-G-T **
21106895-C-T 18945009-C-T **
21141386-T-C 18979500-T-C **
21155137-A-G 18993251-A-G **
21677345-C-A 19515459-C-A **
21155172-C-A 18993286-C-A **
21184996-T-A 19023110-T-A **
21196495-G-T 19034609-G-T **
21262734-A-G 19100848-A-G **
21268511-C-T 19106625-C-T **
21307189-G-A 19145303-G-A **
21334011-C-A 19172125-C-A **
21387130-C-T 19225244-C-T **
21588659-G-T 19426773-G-T **
22838444-G-C 20676558-G-C **
23062865-T-C 20900979-T-C **
20711456-G-T 18549570-G-T P4_Prx **
28687258-T-G 26541111-T-G **
28464889-A-T 26318742-A-T **
28464895-A-T 26318748-A-T **
28464898-A-T 26318751-A-T **
28497037-C-A 26350890-C-A **
28537788-G-C 26391641-G-C **
28547428-T-A 26401281-T-A **
28574612-T-G 26428465-T-G **
28633103-C-A 26486956-C-A **
28701812-A-T 26555665-A-T **
28464872-A-C 26318725-A-C **
28707323-T-A 26561176-T-A **
28748727-G-T 26602580-G-T **
28776357-G-C 26630210-G-C **
56714072-G-A **
56714091-G-C **
56714095-T-TCTTTC **
56845868-C-A **
56861613-G-T **
56868904-A-T **
28464883-A-G 26318736-A-G **
28229292-T-C 26083145-T-C P1_b4 **
23138556-C-T 20976670-C-T **
23779908-G-T 21618022-G-T **
23144253-A-G 20982367-A-G **
23199841-T-C 21037955-T-C **
23200149-C-G 21038263-C-G **
23204825-G-T 21042939-G-T **
23333714-A-G 21171828-A-G **
23338261-C-A 21176375-C-A **
23340709-C-G 21178823-C-G **
23697523-C-A 21535637-C-A **
23875546-C-A 21713660-C-A **
28062615-T-C 25916468-T-C P1_Y2 **
24402020-C-G 22255873-C-G **
24433357-C-A 22287210-C-A **
25720455-T-A 23574308-T-A P1_b3 **
26025316-G-C 23879169-G-C P1_Y1 **
26098150-G-T 23952003-G-T P1_Y1 **
26314802-T-C 24168655-T-C P1_Y1 **
27521786-C-A 25375639-C-A P1_Y2 **
27607763-T-C 25461616-T-C P1_Y2 **
27618244-A-C 25472097-A-C P1_Y2 **
20840737-T-C 18678851-T-C P4_Gap **
20654925-A-G 18493039-A-G P4_Prx **
16205821-G-A 14093941-G-A FGC28903 **
17491984-G-T 15380104-G-T **
17058590-G-A 14946710-G-A **
17169397-A-C 15057517-A-C **
17169405-A-G 15057525-A-G **
17213244-G-T 15101364-G-T **
17213245-C-T 15101365-C-T **
17310909-G-T 15199029-G-T **
17406858-A-T 15294978-A-T **
17489758-A-T 15377878-A-T **
17503388-G-T 15391508-G-T **
17027647-T-G 14915767-T-G **
17503672-G-A 15391792-G-A FT46478 **
17535194-C-A 15423314-C-A **
17547634-C-A 15435754-C-A **
17551916-A-C 15440036-A-C **
17581958-T-A 15470078-T-A **
17634629-C-A 15522749-C-A **
17638466-T-G 15526586-T-G **
17854340-C-T 15742460-C-T **
17863365-A-T 15751485-A-T **
17043123-T-C 14931243-T-C **
16993528-T-C 14881648-T-C **
18071470-C-T 15959590-C-T **
10763337-A-G **
16210952-T-C 14099072-T-C **
16284282-C-A 14172402-C-A **
16316744-G-A 14204864-G-A **
16342256-A-T 14230376-A-T 7×GAAG**
16412836-A-G 14300956-A-G **
16417326-C-A 14305446-C-A **
16423349-C-A 14311469-C-A **
16423373-C-A 14311493-C-A **
16445798-A-G 14333918-A-G **
16931246-T-C 14819366-T-C **
16506984-C-A 14395104-C-A **
16602683-A-G 14490803-A-G **
16620732-C-T 14508852-C-T **
16688249-G-A 14576369-G-A **
16738727-T-C 14626847-T-C **
16847724-G-T 14735844-G-T **
16889823-G-T 14777943-G-T **
16889845-G-T 14777965-G-T **
16931104-G-T 14819224-G-T **
17907834-C-T 15795954-C-T **
18130477-A-C 16018597-A-C **
20632089-A-G 18470203-A-G P4_Prx **
19547452-T-A 17435572-T-A **
19127633-A-AT 17015753-A-AT **
19248559-G-T 17136679-G-T **
19271495-C-G 17159615-C-G **
19324147-C-A 17212267-C-A **
19429370-C-T 17317490-C-T **
19448330-C-T 17336450-C-T **
19464104-T-A 17352224-T-A **
19465637-A-C 17353757-A-C **
19592338-T-TG 17480458-T-TG P5_Prx **
19127619-T-C 17015739-T-C **
19622071-A-C 17510191-A-C P5_Prx **
19709574-G-T 17597694-G-T P5_Prx **
19775341-G-A 17663461-G-A P5_Prx **
20108241-TA-T 17996361-TA-T P5_Dst **
20458301-A-G 18296415-A-G P5_Dst **
20574824-A-C 18412938-A-C P5_Dst **
20574915-G-T 18413029-G-T P5_Dst **
20603667-C-G 18441781-C-G P5_Dst **
20603816-A-G 18441930-A-G P5_Dst **
19127628-A-T 17015748-A-T **
19122099-A-G 17010219-A-G **
18194608-C-A 16082728-C-A **
18744194-A-C 16632314-A-C **
18197823-C-A 16085943-C-A **
18249853-G-T 16137973-G-T **
18340607-A-T 16228727-A-T P6_Prx **
18407003-A-T 16295123-A-T P6_Gap **
18621712-T-C 16509832-T-C **
18628132-C-G 16516252-C-G **
18630945-G-C 16519065-G-C **
18728976-C-A 16617096-C-A **
18730934-A-G 16619054-A-G **
18756817-T-C 16644937-T-C **
19068021-C-A 16956141-C-A **
18766788-A-T 16654908-A-T **
18769471-G-A 16657591-G-A **
18825625-G-T 16713745-G-T **
18831658-C-A 16719778-C-A **
18880017-A-T 16768137-A-T **
18997589-C-A 16885709-C-A **
19022307-C-A 16910427-C-A **
19052026-C-G 16940146-C-G **
19053393-G-T 16941513-G-T **
10763353-T-TAAGCA **
10766744-T-C **
10761718-A-C **
3229530-A-G 3361489-A-G **
10892055-A-C **
18984033-C-A 16872153-C-A Y131254 **
11643472-T-C **
3627847-C-A 3759806-C-A **
18978754-C-A 16866874-C-A **
3968030-C-A 4099989-C-A **
8479475-C-A 8611434-C-A **
10993059-CA-C **
6975966-C-A 7107925-C-A **
9320430-A-C 9482821-A-C **
22185855-CTTTTTT-C 20023969-CTTTTTT-C 25×T**
10764609-C-G **
10861377-C-A **
2708320-C-A 2840279-C-A **
10654473-G-T **
16738743-G-T 14626863-G-T **
6699076-G-T 6831035-G-T **
15712261-C-A 13600381-C-A **
6699059-A-G 6831018-A-G **
7339803-A-T 7471762-A-T **
13522945-C-A 11367269-C-A **
4103213-A-G 4235172-A-G **
23006754-G-A 20844868-G-A **
17870942-C-A 15759062-C-A **
20569469-G-T 18407583-G-T P5_Dst **
4900288-C-A 5032247-C-A **
28507421-C-A 26361274-C-A **
7150762-C-A 7282721-C-A **
16041050-C-A 13929170-C-A **
26014748-T-TC 23868601-T-TC P1_Y1 **
13485561-C-G 11329885-C-G **
4171701-C-A 4303660-C-A **
11037482-C-A **
6663965-G-T 6795924-G-T **
11015767-C-A **
11651277-T-G **
8045399-C-A 8177358-C-A **
16874915-C-A 14763035-C-A **
3849211-G-A 3981170-G-A **
9952548-C-A 10114939-C-A **
20840761-T-C 18678875-T-C P4_Gap **
15279016-C-A 13167115-C-A **
16430395-C-A 14318515-C-A **
5910325-C-A 6042284-C-A **
8816491-C-A 8948450-C-A **
10758145-C-A **
17782794-G-T 15670914-G-T **
15866201-G-A 13754321-G-A **
13891673-T-G 11770967-T-G **
28546916-C-A 26400769-C-A **
11009022-T-C **
2708378-C-A 2840337-C-A **
28622702-C-A 26476555-C-A **
18789670-C-A 16677790-C-A **
6392562-C-A 6524521-C-A **
19476494-T-C 17364614-T-C **
10838168-C-A **
21514052-C-A 19352166-C-A **
21176983-C-A 19015097-C-A **
6401402-C-A 6533361-C-A **
28514607-C-A 26368460-C-A **
21238657-G-C 19076771-G-C **
3626496-T-C 3758455-T-C **
4769256-G-A 4901215-G-A **
26204662-A-G 24058515-A-G P1_Y1 **
10924984-A-G **
13233543-C-A 11077867-C-A **
10654059-A-T **
28556323-C-G 26410176-C-G **
17953658-C-A 15841778-C-A **
15728772-T-C 13616892-T-C **
10976201-C-A **
2854773-C-A 2986732-C-A **
17567433-C-A 15455553-C-A **
28714444-C-A 26568297-C-A **
10815346-C-T **
9691025-G-T 9853416-G-T IR3_Prx **
21945376-C-A 19783490-C-A **
10751544-C-A **
14800038-C-A 12688109-C-A **
6509329-C-A 6641288-C-A **
21238668-T-C 19076782-T-C **
4124035-C-A 4255994-C-A **
17638423-G-C 15526543-G-C **
15982165-T-A 13870285-T-A **
18127633-C-A 16015753-C-A **
16095755-T-A 13983875-T-A **
21438279-C-A 19276393-C-A **
4521571-T-C 4653530-T-C **
19055446-G-T 16943566-G-T **
10823755-TACACC-T **
20802737-C-A 18640851-C-A P4_Gap **
10958810-C-A **
2665828-C-A 2797787-C-A **
11675242-T-A **
7277765-C-A 7409724-C-A **
10792637-C-A **
5194769-C-T 5326728-C-T **
10849662-A-C **
10997204-G-T **
11025820-C-A **
16221606-C-A 14109726-C-A **
10651538-C-A **
21371602-C-A 19209716-C-A **
13290889-C-A 11135213-C-A **
13975815-C-A 11855109-C-A **
10823784-A-T **
19720733-GA-G 17608853-GA-G P5_Prx **
18565057-GTC-G 16453177-GTC-G **
10059379-TAA-T 10221770-TAA-T 11×A**
21773905-C-A 19612019-C-A **
21472405-C-A 19310519-C-A **
13859408-T-A 11738702-T-A **
19012404-C-A 16900524-C-A **
3436392-G-A 3568351-G-A **
14281055-C-A 12160349-C-A **
21534733-C-A 19372847-C-A **
9163047-C-A 9325438-C-A **
18328809-G-A 16216929-G-A P6_Prx **
8080133-G-C 8212092-G-C **
17915959-C-A 15804079-C-A **
23831288-T-G 21669402-T-G **
10050729-C-A 10213120-C-A **
6714605-C-A 6846564-C-A **
17144071-G-T 15032191-G-T **
15566811-T-A 13454931-T-A **
10978773-C-A **
18256227-T-C 16144347-T-C **
6752537-C-A 6884496-C-A **
13598641-C-A 11442965-C-A **
6709117-C-A 6841076-C-A **
19079256-A-G 16967376-A-G **
10847073-C-A **
10847107-C-T **
7721439-C-A 7853398-C-A **
5316899-C-A 5448858-C-A **
7078517-C-A 7210476-C-A **
17927421-C-A 15815541-C-A **
24636409-G-T 22490262-G-T P3_t2 **
8351628-C-A 8483587-C-A **
27424016-G-T 25277869-G-T P1_g3 **
22914591-C-T 20752705-C-T **
17676307-A-G 15564427-A-G **
7356374-C-A 7488333-C-A **
14146962-C-A 12026256-C-A **
10672682-C-A **
18204985-CAAAAAA-C 16093105-CAAAAAA-C 23×A**
6490723-C-A 6622682-C-A **
5212073-C-A 5344032-C-A **
11014693-C-T **
10847071-T-A **
15927809-C-A 13815929-C-A **
18743339-A-C 16631459-A-C **
9732928-C-T 9895319-C-T IR3_Prx **
15688965-C-A 13577085-C-A **
2895258-C-A 3027217-C-A **
20685153-C-A 18523267-C-A P4_Prx **
9990017-G-T 10152408-G-T **
28062618-A-G 25916471-A-G P1_Y2 **
9735640-A-T 9898031-A-T IR3_Prx **
4171688-C-A 4303647-C-A **
25964916-T-G 23818769-T-G P1_Y1 **
28633698-C-A 26487551-C-A **
10929973-C-A **
10824211-C-T **
9397996-C-A 9560387-C-A **
10950985-ACACTC-A **
21428509-C-A 19266623-C-A **
11001980-C-A **
14563987-A-T 12452187-A-T **
15423442-T-C 13311562-T-C **
13988988-C-A 11868282-C-A **
28649040-C-A 26502893-C-A **
15387914-C-A 13276034-C-A **
21427671-C-A 19265785-C-A **
10947113-A-C **
7223458-C-A 7355417-C-A **
7131322-C-A 7263281-C-A **
7132758-T-C 7264717-T-C **
7139105-T-G 7271064-T-G **
7158096-A-G 7290055-A-G **
7166579-A-T 7298538-A-T **
7201535-G-A 7333494-G-A **
7207440-C-A 7339399-C-A **
7211382-T-A 7343341-T-A **
7295933-T-G 7427892-T-G **
7033560-T-G 7165519-T-G **
7295992-T-A 7427951-T-A **
7337036-G-C 7468995-G-C **
7337820-A-G 7469779-A-G **
7341412-T-G 7473371-T-G **
7363313-TC-T 7495272-TC-T **
7377474-G-C 7509433-G-C **
7385758-T-A 7517717-T-A **
7754533-G-T 7886492-G-T **
7783279-A-T 7915238-A-T **
7063770-A-G 7195729-A-G **
7013469-G-C 7145428-G-C **
7832300-A-G 7964259-A-G **
6374455-G-T 6506414-G-T **
6001559-T-C 6133518-T-C **
6003387-G-T 6135346-G-T **
6007204-C-A 6139163-C-A **
6085995-C-A 6217954-C-A **
6096976-A-T 6228935-A-T **
6225300-C-A 6357259-C-A IR3_Dst **
6255293-T-G 6387252-T-G IR3_Dst **
6255379-A-C 6387338-A-C IR3_Dst **
6374587-G-T 6506546-G-T **
6916367-C-A 7048326-C-A **
6454124-G-T 6586083-G-T **
6454562-A-G 6586521-A-G **
6699044-T-G 6831003-T-G **
6699046-GT-G 6831005-GT-G **
6786919-T-A 6918878-T-A **
6806769-TTAAAGATGATG-T 6938728-TTAAAGATGATG-T **
6839688-C-A 6971647-C-A **
6892011-A-C 7023970-A-C **
6916316-C-G 7048275-C-G **
7829594-C-G 7961553-C-G **
7832305-G-T 7964264-G-T **
5961164-T-C 6093123-T-C **
10032777-C-A 10195168-C-A **
9940628-C-G 10103019-C-G **
9942159-C-A 10104550-C-A **
9964238-A-C 10126629-A-C **
9964246-C-A 10126637-C-A **
9978043-A-C 10140434-A-C **
9994792-T-C 10157183-T-C **
10019720-A-C 10182111-A-C **
10029369-C-A 10191760-C-A **
10072302-G-T 10234693-G-T **
9865178-G-T 10027569-G-T **
10624363-C-G **
10632724-C-A **
10660905-C-A **
10661902-T-A **
10669260-T-A **
10677600-C-T **
10677878-T-G **
10689865-G-T **
10755119-T-C **
9940627-A-C 10103018-A-C **
9839400-G-T 10001791-G-T **
7896958-C-A 8028917-C-A **
8712894-TG-T 8844853-TG-T **
8016966-GAC-T 8148925-GAC-T **
8073217-A-G 8205176-A-G **
8077538-G-T 8209497-G-T **
8110900-C-A 8242859-C-A **
8138145-A-C 8270104-A-C **
8321688-G-T 8453647-G-T **
8671668-C-A 8803627-C-A **
8679418-T-C 8811377-T-C **
8697394-C-A 8829353-C-A **
8746390-C-A 8878349-C-A **
9702829-C-T 9865220-C-T IR3_Prx **
8911693-A-C 9043652-A-C **
9056500-C-A **
9119397-A-C **
9025543-C-A 9187934-C-A **
9047494-T-C 9209885-T-C **
9234315-C-A 9396706-C-A **
9514944-C-T 9677335-C-T **
9515025-G-C 9677416-G-C **
9531235-T-TGC 9693626-T-TGC IR3_Prx **
6001535-T-C 6133494-T-C **
6255342-T-C 6387301-T-C IR3_Dst **
56876047-G-A **
4108202-T-G 4240161-T-G **
3781029-C-G 3912988-C-G **
3831161-C-A 3963120-C-A **
3849281-G-T 3981240-G-T **
3850011-T-C 3981970-T-C **
3939216-G-T 4071175-G-T **
3939425-G-T 4071384-G-T **
4093900-C-T 4225859-C-T **
4108319-C-T 4240278-C-T **
3609785-A-G 3741744-A-G **
4129669-A-C 4261628-A-C **
4129790-A-C 4261749-A-C **
4133327-G-A 4265286-G-A **
4160433-G-C 4292392-G-C **
4326414-T-C 4458373-T-C **
4416898-G-A 4548857-G-A **
4447344-T-G 4579303-T-G **
3697078-G-T 3829037-G-T **
3607930-A-G 3739889-A-G **
4574626-G-T 4706585-G-T **
2799614-G-A 2931573-G-A **
26047325-T-G 23901178-T-G P1_Y1 **
7341015-G-T 7472974-G-T **
17770598-T-A 15658718-T-A **
2684241-T-A 2816200-T-A **
2684688-A-T 2816647-A-T **
2759452-A-C 2891411-A-C **
2778669-C-A 2910628-C-A **
2856388-T-C 2988347-T-C **
3551363-T-C 3683322-T-C **
2948316-C-A 3080275-C-A **
2998953-T-C 3130912-T-C **
3111083-G-T 3243042-G-T **
3229535-T-G 3361494-T-G 15×TG**
3346140-A-G 3478099-A-G **
3480984-C-A 3612943-C-A **
3515366-G-T 3647325-G-T **
3550575-A-T 3682534-A-T **
4574509-G-T 4706468-G-T **
3968096-C-A 4100055-C-A **
4655869-C-A 4787828-C-A **
5267558-TG-T 5399517-TG-T **
5815013-A-C 5946972-A-C **
5814882-G-T 5946841-G-T **
5200680-G-C 5332639-G-C **
5191230-T-TTC 5323189-T-TTC **
5127657-A-T 5259616-A-T **
5818447-G-T 5950406-G-T **
5824162-A-T 5956121-A-T **
4959826-A-G 5091785-A-G **
5336808-A-C 5468767-A-C **
5869628-C-A 6001587-C-A **
5401168-A-G 5533127-A-G **
4934838-C-A 5066797-C-A **
4926153-G-T 5058112-G-T **
4919495-C-A 5051454-C-A **
5267578-G-T 5399537-G-T **
5620147-C-A 5752106-C-A **
4665792-C-A 4797751-C-A **
5795978-T-G 5927937-T-G **
5882237-G-T 6014196-G-T **
5927193-A-G 6059152-A-G **
5961036-T-A 6092995-T-A **
4687919-A-C 4819878-A-C **
4861906-T-A 4993865-T-A **
7502266-G-T 7634225-G-T IR1_L ***
9042545-G-T 9204936-G-T ***
10992684-C-A ***
11643721-ATTGAT-A,AATGAA ***
2998992-G-T 3130951-G-T ***
20065220-G-T 17953340-G-T P5_Gap ***
11650731-G-T ***
16557867-C-A 14445987-C-A ***
21961777-C-A 19799891-C-A ***
16369153-C-A 14257273-C-A ***
23801945-C-A 21640059-C-A ***
13821334-C-A 11700628-C-A BY90555 ***
10968504-C-A ***
16868631-GTA-G,GTATA 14756751-GTA-G,GTATA ***
2693175-C-A 2825134-C-A ***
10831532-T-A,C ***
11030175-T-G ***
11030130-A-T ***
11030124-C-G ***
10677518-T-TTCCGC ***
19060153-C-A 16948273-C-A BY17935 A16289 ***
19415337-A-G 17303457-A-G ***
22647516-CTTATA-C 20485630-CTTATA-C ***
56847364-A-T ***
4179158-C-A 4311117-C-A ***
56847300-C-A ***
3593022-AAG-A 3724981-AAG-A ***
16875047-A-T 14763167-A-T ***
7058076-A-T 7190035-A-T ***
10968503-C-A ***
15468666-T-G 13356786-T-G ***
10938547-A-G ***
18740828-G-A 16628948-G-A ***
4805004-C-A 4936963-C-A ***
8350317-C-A 8482276-C-A ***
10991290-CT-C ***
22287976-T-C 20126090-T-C BY216208 DYZ19 ***
18037772-C-A 15925892-C-A ***
23498099-TG-T 21336213-TG-T ***
10921172-A-T ***
4527510-A-T 4659469-A-T ***
15270877-TAA-T,TA 13158966-TAA-T,TA 13×A***
21663277-AG-AA,G 19501391-AG-AA,G ***
23827530-T-A 21665644-T-A 9×A***
19302703-C-A 17190823-C-A ***
19367024-C-G 17255144-C-G ***
9508124-C-A 9670515-C-A ***
14995486-C-G 12883571-C-G ***
21891317-C-A 19729431-C-A ***
23420978-G-A 21259092-G-A ***
23341992-A-G 21180106-A-G ***
23197356-G-A 21035470-G-A ***
9025616-T-C 9188007-T-C ***
18406556-C-A 16294676-C-A P6_Gap ***
16986934-TA-T 14875054-TA-T ***
3965598-ATTTTATT-A 4097557-ATTTTATT-A ***
15510517-C-A 13398637-C-A ***
3657723-C-A 3789682-C-A ***
10677497-A-T ***
11012432-G-T ***
23419315-C-A 21257429-C-A ***
22538460-A-G 20376574-A-G ***
8135220-T-TC 8267179-T-TC ***
19299110-C-T 17187230-C-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 580876961913678266527720377
Used in age calculations961913678266527720377
Counts of SNPs2222
Variant counts last updated 2019-10-10 02:43:36.


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