O'Neill
BigY3: B82361, BigY2: B82361MDKA Birth:
Northern IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 B82361 | BigY2 B82361 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:9693858-C-T hg38:Y:9856249-C-T | IR3_Prx | A+ | ||||||
| hg38:Y:10626867-C-G | A* | |||||||
| hg19:Y:26219190-C-T hg38:Y:24073043-C-T | P1_Y1 | A* | A* | |||||
| hg19:Y:27762778-T-TAC hg38:Y:25616631-T-TAC | P1_Y2 | 17×AC | A* | |||||
| hg19:Y:17882005-C-T hg38:Y:15770125-C-T | BY118081 | Y | Y | + | + | |||
| hg19:Y:3003557-A-G hg38:Y:3135516-A-G | FT90237 | + | ||||||
| hg19:Y:4559305-G-C hg38:Y:4691264-G-C | FT90367 | + | ||||||
| hg19:Y:16842752-G-A hg38:Y:14730872-G-A | FT90638 | Y | + | |||||
| hg19:Y:22279531-T-G hg38:Y:20117645-T-G | DYZ19 | * | ||||||
| hg19:Y:19418178-C-T hg38:Y:17306298-C-T | CTS10353 S1175 YSC0001249 | ** | ||||||
| hg19:Y:4826545-G-T hg38:Y:4958504-G-T | Z23448 | ** | ||||||
| hg19:Y:17668516-TG-T hg38:Y:15556636-TG-T | ** | |||||||
| hg38:Y:10799447-C-T | ** | |||||||
| hg19:Y:21107861-C-A hg38:Y:18945975-C-A | ** | |||||||
| hg19:Y:21816378-C-A hg38:Y:19654492-C-A | ** | |||||||
| hg19:Y:5249270-C-A hg38:Y:5381229-C-A | ** | |||||||
| hg19:Y:13642262-C-A hg38:Y:11486586-C-A | ** | |||||||
| hg38:Y:10851437-G-C | BY54081 | ** | ||||||
| hg19:Y:7503686-G-T hg38:Y:7635645-G-T | IR1_L | ** | ||||||
| hg38:Y:10965264-C-A | ** | |||||||
| hg38:Y:10757748-T-C | ** | |||||||
| hg38:Y:10992271-C-G | ** | |||||||
| hg38:Y:10759860-C-T | ** | |||||||
| hg19:Y:19112625-G-T hg38:Y:17000745-G-T | ** | |||||||
| hg38:Y:10877818-C-A | ** | |||||||
| hg19:Y:24870821-C-A hg38:Y:22724674-C-A | IR1_R | ** | ||||||
| hg38:Y:10979300-A-C | ** | |||||||
| hg38:Y:10979309-A-T | ** | |||||||
| hg38:Y:10669508-C-A | ** | |||||||
| hg38:Y:10982619-T-G | ** | |||||||
| hg38:Y:10973897-C-A | ** | |||||||
| hg38:Y:10777979-T-C | ** | |||||||
| hg38:Y:10776151-A-T | ** | |||||||
| hg38:Y:10629062-C-T | ** | |||||||
| hg38:Y:10689967-C-A | ** | |||||||
| hg38:Y:10820408-T-A | ** | |||||||
| hg38:Y:10982632-A-T | ** | |||||||
| hg38:Y:10814490-T-A | ** | |||||||
| hg38:Y:10814495-T-C | ** | |||||||
| hg38:Y:10814497-C-G | ** | |||||||
| hg38:Y:10814507-C-T | ** | |||||||
| hg38:Y:10814520-A-C | ** | |||||||
| hg38:Y:10814522-G-C | ** | |||||||
| hg38:Y:10814545-C-T | ** | |||||||
| hg19:Y:17580109-C-A hg38:Y:15468229-C-A | ** | |||||||
| hg19:Y:28533862-T-G hg38:Y:26387715-T-G | ** | |||||||
| hg19:Y:28345686-C-CACAT hg38:Y:26199539-C-CACAT | P1_gr2 | ** | ||||||
| hg38:Y:10877838-C-A | ** | |||||||
| hg38:Y:10877845-T-C | ** | |||||||
| hg19:Y:6791092-C-A hg38:Y:6923051-C-A | ** | |||||||
| hg19:Y:15061690-C-CTT hg38:Y:12949782-C-CTT | 13×T | ** | ||||||
| hg19:Y:7098893-G-T hg38:Y:7230852-G-T | ** | |||||||
| hg19:Y:9048137-G-T hg38:Y:9210528-G-T | ** | |||||||
| hg38:Y:10767868-T-C | ** | |||||||
| hg19:Y:22935398-C-A hg38:Y:20773512-C-A | ** | |||||||
| hg19:Y:14247818-C-A hg38:Y:12127112-C-A | ** | |||||||
| hg19:Y:14502709-C-A hg38:Y:12390914-C-A | ** | |||||||
| hg19:Y:13856101-G-T hg38:Y:11735395-G-T | DYZ17 | ** | ||||||
| hg19:Y:3287005-C-A hg38:Y:3418964-C-A | ** | |||||||
| hg38:Y:10657177-C-A | ** | |||||||
| hg38:Y:10841197-C-A | ** | |||||||
| hg19:Y:8044701-C-A hg38:Y:8176660-C-A | ** | |||||||
| hg38:Y:56851193-C-A | ** | |||||||
| hg38:Y:11036137-C-G | ** | |||||||
| hg38:Y:10982592-A-C | ** | |||||||
| hg19:Y:2950209-C-A hg38:Y:3082168-C-A | ** | |||||||
| hg38:Y:10767870-C-CCACTG | ** | |||||||
| hg19:Y:13543627-C-A hg38:Y:11387951-C-A | ** | |||||||
| hg19:Y:9089000-T-G hg38:Y:9251391-T-G | ** | |||||||
| hg19:Y:17018807-C-A hg38:Y:14906927-C-A | ** | |||||||
| hg19:Y:3610108-C-A hg38:Y:3742067-C-A | ** | |||||||
| hg38:Y:10806670-CCATTCCTTTG-C | ** | |||||||
| hg38:Y:10806732-A-C | ** | |||||||
| hg19:Y:16290939-C-A hg38:Y:14179059-C-A | FTB28976 | ** | ||||||
| hg19:Y:14557702-G-T hg38:Y:12445903-G-T | ** | |||||||
| hg19:Y:7470583-C-A hg38:Y:7602542-C-A | IR1_L | ** | ||||||
| hg19:Y:15790530-C-A hg38:Y:13678650-C-A | ** | |||||||
| hg38:Y:10818299-C-A | ** | |||||||
| hg19:Y:15250778-C-A hg38:Y:13138864-C-A | ** | |||||||
| hg19:Y:14198371-C-A hg38:Y:12077665-C-A | ** | |||||||
| hg38:Y:11014717-C-A | ** | |||||||
| hg19:Y:15335036-C-A hg38:Y:13223154-C-A | ** | |||||||
| hg38:Y:10682723-CAACTGCACTG-C | ** | |||||||
| hg38:Y:10921211-A-T | ** | |||||||
| hg38:Y:10796526-C-T | ** | |||||||
| hg19:Y:20446461-G-GT hg38:Y:18284575-G-GT | P5_Dst | ** | ||||||
| hg19:Y:23281361-A-T hg38:Y:21119475-A-T | 14×T | ** | ||||||
| hg19:Y:22564505-C-A hg38:Y:20402619-C-A | ** | |||||||
| hg19:Y:14362053-C-A hg38:Y:12241348-C-A | ** | |||||||
| hg19:Y:21202326-C-A hg38:Y:19040440-C-A | ** | |||||||
| hg19:Y:14639205-A-G hg38:Y:12527274-A-G | ** | |||||||
| hg19:Y:9982538-C-A hg38:Y:10144929-C-A | ** | |||||||
| hg19:Y:16620188-C-A hg38:Y:14508308-C-A | ** | |||||||
| hg19:Y:13700606-T-A hg38:Y:11544930-T-A | DYZ17 | ** | ||||||
| hg19:Y:19295542-G-T hg38:Y:17183662-G-T | ** | |||||||
| hg38:Y:56763486-C-A | ** | |||||||
| hg38:Y:10887081-C-A | ** | |||||||
| hg19:Y:21328187-C-A hg38:Y:19166301-C-A | ** | |||||||
| hg19:Y:17654795-C-A hg38:Y:15542915-C-A | ** | |||||||
| hg19:Y:3716189-C-A hg38:Y:3848148-C-A | ** | |||||||
| hg38:Y:10749379-C-A | ** | |||||||
| hg19:Y:3161082-C-A hg38:Y:3293041-C-A | ** | |||||||
| hg19:Y:23277356-C-A hg38:Y:21115470-C-A | ** | |||||||
| hg19:Y:6699560-C-A hg38:Y:6831519-C-A | ** | |||||||
| hg38:Y:10799427-C-A | ** | |||||||
| hg38:Y:10885670-C-A | ** | |||||||
| hg19:Y:15181722-A-C hg38:Y:13069808-A-C | ** | |||||||
| hg19:Y:2745800-G-C hg38:Y:2877759-G-C | ** | |||||||
| hg19:Y:2755528-C-A hg38:Y:2887487-C-A | ** | |||||||
| hg19:Y:3105303-G-T hg38:Y:3237262-G-T | ** | |||||||
| hg19:Y:3223138-G-T hg38:Y:3355097-G-T | ** | |||||||
| hg19:Y:3304617-A-G hg38:Y:3436576-A-G | ** | |||||||
| hg19:Y:3347094-C-A hg38:Y:3479053-C-A | ** | |||||||
| hg19:Y:3377435-G-T hg38:Y:3509394-G-T | ** | |||||||
| hg19:Y:3388715-T-C hg38:Y:3520674-T-C | ** | |||||||
| hg19:Y:3389611-C-A hg38:Y:3521570-C-A | ** | |||||||
| hg19:Y:3500656-G-A hg38:Y:3632615-G-A | ** | |||||||
| hg19:Y:3565529-G-T hg38:Y:3697488-G-T | ** | |||||||
| hg19:Y:3684288-C-A hg38:Y:3816247-C-A | ** | |||||||
| hg19:Y:3688565-G-A hg38:Y:3820524-G-A | ** | |||||||
| hg19:Y:3754417-G-T hg38:Y:3886376-G-T | ** | |||||||
| hg19:Y:4040177-C-A hg38:Y:4172136-C-A | ** | |||||||
| hg19:Y:4080696-T-G hg38:Y:4212655-T-G | ** | |||||||
| hg19:Y:4288559-C-A hg38:Y:4420518-C-A | ** | |||||||
| hg19:Y:4558238-C-T hg38:Y:4690197-C-T | ** | |||||||
| hg19:Y:4875006-G-T hg38:Y:5006965-G-T | ** | |||||||
| hg19:Y:5161511-C-A hg38:Y:5293470-C-A | ** | |||||||
| hg19:Y:5235728-G-T hg38:Y:5367687-G-T | ** | |||||||
| hg19:Y:5281053-G-T hg38:Y:5413012-G-T | ** | |||||||
| hg19:Y:5393234-G-T hg38:Y:5525193-G-T | ** | |||||||
| hg19:Y:5523522-C-A hg38:Y:5655481-C-A | ** | |||||||
| hg19:Y:5644983-C-G hg38:Y:5776942-C-G | ** | |||||||
| hg19:Y:5712675-C-A hg38:Y:5844634-C-A | ** | |||||||
| hg19:Y:5756413-A-C hg38:Y:5888372-A-C | ** | |||||||
| hg19:Y:6028967-AT-A hg38:Y:6160926-AT-A | ** | |||||||
| hg19:Y:6031960-C-A hg38:Y:6163919-C-A | ** | |||||||
| hg19:Y:6316527-G-C hg38:Y:6448486-G-C | IR3_Dst | ** | ||||||
| hg19:Y:6316544-C-A hg38:Y:6448503-C-A | IR3_Dst | ** | ||||||
| hg19:Y:6390042-C-A hg38:Y:6522001-C-A | ** | |||||||
| hg19:Y:6465083-C-A hg38:Y:6597042-C-A | ** | |||||||
| hg19:Y:6650846-C-A hg38:Y:6782805-C-A | ** | |||||||
| hg19:Y:6878940-C-A hg38:Y:7010899-C-A | ** | |||||||
| hg19:Y:6886896-A-G hg38:Y:7018855-A-G | ** | |||||||
| hg19:Y:7099383-A-G hg38:Y:7231342-A-G | ** | |||||||
| hg19:Y:7099384-G-A hg38:Y:7231343-G-A | ** | |||||||
| hg19:Y:7115918-T-G hg38:Y:7247877-T-G | ** | |||||||
| hg19:Y:7160969-C-A hg38:Y:7292928-C-A | ** | |||||||
| hg19:Y:7161677-C-A hg38:Y:7293636-C-A | ** | |||||||
| hg19:Y:7198860-C-A hg38:Y:7330819-C-A | ** | |||||||
| hg19:Y:7217179-G-T hg38:Y:7349138-G-T | ** | |||||||
| hg19:Y:7295850-G-T hg38:Y:7427809-G-T | ** | |||||||
| hg19:Y:7360979-C-A hg38:Y:7492938-C-A | ** | |||||||
| hg19:Y:7364920-C-A hg38:Y:7496879-C-A | ** | |||||||
| hg19:Y:7397665-C-A hg38:Y:7529624-C-A | ** | |||||||
| hg19:Y:7590854-C-T hg38:Y:7722813-C-T | ** | |||||||
| hg19:Y:7608483-C-T hg38:Y:7740442-C-T | ** | |||||||
| hg19:Y:7670651-C-A hg38:Y:7802610-C-A | ** | |||||||
| hg19:Y:8055223-G-T hg38:Y:8187182-G-T | ** | |||||||
| hg19:Y:8162031-C-A hg38:Y:8293990-C-A | ** | |||||||
| hg19:Y:8214261-G-T hg38:Y:8346220-G-T | ** | |||||||
| hg19:Y:8214918-C-G hg38:Y:8346877-C-G | ** | |||||||
| hg19:Y:8408505-C-A hg38:Y:8540464-C-A | ** | |||||||
| hg19:Y:8697829-C-T hg38:Y:8829788-C-T | ** | |||||||
| hg19:Y:8842535-C-A hg38:Y:8974494-C-A | ** | |||||||
| hg19:Y:8866057-C-A hg38:Y:8998016-C-A | ** | |||||||
| hg19:Y:9074801-G-A hg38:Y:9237192-G-A | ** | |||||||
| hg19:Y:9088973-C-G hg38:Y:9251364-C-G | ** | |||||||
| hg19:Y:9093313-C-A hg38:Y:9255704-C-A | ** | |||||||
| hg19:Y:9327957-C-T hg38:Y:9490348-C-T | ** | |||||||
| hg19:Y:9829047-G-T hg38:Y:9991438-G-T | ** | |||||||
| hg19:Y:9859060-G-T hg38:Y:10021451-G-T | ** | |||||||
| hg19:Y:9952726-A-T hg38:Y:10115117-A-T | ** | |||||||
| hg19:Y:9958047-G-T hg38:Y:10120438-G-T | ** | |||||||
| hg38:Y:10624916-A-C | ** | |||||||
| hg38:Y:10626457-A-C | FT428000 | ** | ||||||
| hg38:Y:10629061-C-G | ** | |||||||
| hg38:Y:10629069-T-A | ** | |||||||
| hg38:Y:10646672-CTCTCT-C | ** | |||||||
| hg38:Y:10659417-T-C | ** | |||||||
| hg38:Y:10660013-C-A | FT428446 | ** | ||||||
| hg38:Y:10667881-T-C | ** | |||||||
| hg38:Y:10668978-A-G | ** | |||||||
| hg38:Y:10682701-T-A | ** | |||||||
| hg38:Y:10686407-C-A | ** | |||||||
| hg38:Y:10745856-T-A | ** | |||||||
| hg38:Y:10750115-G-T | ** | |||||||
| hg38:Y:10774265-C-A | ** | |||||||
| hg38:Y:10783200-C-A | ** | |||||||
| hg38:Y:10788545-G-T | ** | |||||||
| hg38:Y:10792625-T-C | ** | |||||||
| hg38:Y:10796488-T-C | ** | |||||||
| hg38:Y:10796511-CATTGA-C | ** | |||||||
| hg38:Y:10796554-T-C | ** | |||||||
| hg38:Y:10804473-C-G | ** | |||||||
| hg38:Y:10806708-G-C | ** | |||||||
| hg38:Y:10806715-C-G | ** | |||||||
| hg38:Y:10806727-A-C | ** | |||||||
| hg38:Y:10822540-C-A | ** | |||||||
| hg38:Y:10851714-A-T | FT434123 | ** | ||||||
| hg38:Y:10882571-C-A | ** | |||||||
| hg38:Y:10901275-C-A | ** | |||||||
| hg38:Y:10921182-A-C | ** | |||||||
| hg38:Y:10921213-T-A | ** | |||||||
| hg38:Y:10921226-C-CATGCT | ** | |||||||
| hg38:Y:10921241-C-T | ** | |||||||
| hg38:Y:10921242-A-C | ** | |||||||
| hg38:Y:10925753-G-T | ** | |||||||
| hg38:Y:10926343-C-A | ** | |||||||
| hg38:Y:10940853-C-T | ** | |||||||
| hg38:Y:10940859-T-A | ** | |||||||
| hg38:Y:10940876-C-T | ** | |||||||
| hg38:Y:10940902-ACTCCC-A | ** | |||||||
| hg38:Y:10940915-C-T | FT437473 | ** | ||||||
| hg38:Y:10945096-C-A | ** | |||||||
| hg38:Y:10954607-T-A | ** | |||||||
| hg38:Y:10979292-T-A | ** | |||||||
| hg38:Y:10979304-A-G | ** | |||||||
| hg38:Y:10982560-C-CCGCT | ** | |||||||
| hg38:Y:10982568-T-CC | ** | |||||||
| hg38:Y:10982595-C-CCTCTT | ** | |||||||
| hg38:Y:10982602-A-T | ** | |||||||
| hg38:Y:10982607-A-C | ** | |||||||
| hg38:Y:10987120-TAA-T | ** | |||||||
| hg38:Y:10991035-C-A | ** | |||||||
| hg38:Y:10991501-T-G | ** | |||||||
| hg38:Y:10995712-T-C | ** | |||||||
| hg38:Y:10999604-C-A | ** | |||||||
| hg38:Y:11006383-C-A | ** | |||||||
| hg38:Y:11006885-T-C | ** | |||||||
| hg38:Y:11006895-T-C | ** | |||||||
| hg38:Y:11034694-C-A | ** | |||||||
| hg19:Y:13195997-C-A hg38:Y:11040321-C-A | ** | |||||||
| hg19:Y:13273688-TTTTC-T hg38:Y:11118012-TTTTC-T | ** | |||||||
| hg19:Y:13328826-C-A hg38:Y:11173150-C-A | ** | |||||||
| hg19:Y:13485711-A-G hg38:Y:11330035-A-G | ** | |||||||
| hg19:Y:13550817-A-G hg38:Y:11395141-A-G | ** | |||||||
| hg19:Y:13568429-G-T hg38:Y:11412753-G-T | ** | |||||||
| hg19:Y:13571549-C-A hg38:Y:11415873-C-A | ** | |||||||
| hg19:Y:13594769-C-A hg38:Y:11439093-C-A | ** | |||||||
| hg19:Y:13596072-G-T hg38:Y:11440396-G-T | ** | |||||||
| hg19:Y:13743060-C-A hg38:Y:11587384-C-A | DYZ17 | ** | ||||||
| hg19:Y:13743080-G-T hg38:Y:11587404-G-T | DYZ17 | ** | ||||||
| hg38:Y:11653141-G-A | DYZ17 | ** | ||||||
| hg38:Y:11659917-A-C | DYZ17 | ** | ||||||
| hg19:Y:13803457-G-T hg38:Y:11682751-G-T | DYZ17 | ** | ||||||
| hg19:Y:13809869-G-T hg38:Y:11689163-G-T | DYZ17 | ** | ||||||
| hg19:Y:13960877-T-A hg38:Y:11840171-T-A | ** | |||||||
| hg19:Y:13962020-T-A hg38:Y:11841314-T-A | ** | |||||||
| hg19:Y:13962170-C-A hg38:Y:11841464-C-A | ** | |||||||
| hg19:Y:13973320-C-A hg38:Y:11852614-C-A | ** | |||||||
| hg19:Y:14051819-G-T hg38:Y:11931113-G-T | ** | |||||||
| hg19:Y:14454409-A-G hg38:Y:12333682-A-G | ** | |||||||
| hg19:Y:14482139-G-T hg38:Y:12361408-G-T | ** | |||||||
| hg19:Y:14593553-C-A hg38:Y:12481753-C-A | ** | |||||||
| hg19:Y:14639201-G-T hg38:Y:12527270-G-T | ** | |||||||
| hg19:Y:14700570-C-A hg38:Y:12588636-C-A | FT400796 | ** | ||||||
| hg19:Y:14711786-G-T hg38:Y:12599853-G-T | ** | |||||||
| hg19:Y:15242522-C-A hg38:Y:13130608-C-A | ** | |||||||
| hg19:Y:15297039-G-T hg38:Y:13185138-G-T | ** | |||||||
| hg19:Y:15368993-G-T hg38:Y:13257113-G-T | ** | |||||||
| hg19:Y:15405353-C-A hg38:Y:13293473-C-A | ** | |||||||
| hg19:Y:15611283-A-T hg38:Y:13499403-A-T | 8×AT | ** | ||||||
| hg19:Y:15698154-C-A hg38:Y:13586274-C-A | ** | |||||||
| hg19:Y:15721242-C-A hg38:Y:13609362-C-A | ** | |||||||
| hg19:Y:15722549-C-A hg38:Y:13610669-C-A | ** | |||||||
| hg19:Y:15882455-C-A hg38:Y:13770575-C-A | ** | |||||||
| hg19:Y:15966390-G-T hg38:Y:13854510-G-T | ** | |||||||
| hg19:Y:16233271-C-A hg38:Y:14121391-C-A | ** | |||||||
| hg19:Y:16345600-GAA-G hg38:Y:14233720-GAA-G | 11×A | ** | ||||||
| hg19:Y:16463357-C-A hg38:Y:14351477-C-A | ** | |||||||
| hg19:Y:16489434-G-T hg38:Y:14377554-G-T | ** | |||||||
| hg19:Y:16545414-C-CAA hg38:Y:14433534-C-CAA | 24×A | ** | ||||||
| hg19:Y:16622362-G-A hg38:Y:14510482-G-A | FT143938 | ** | ||||||
| hg19:Y:16631750-C-A hg38:Y:14519870-C-A | 14×T | ** | ||||||
| hg19:Y:17122435-G-T hg38:Y:15010555-G-T | ** | |||||||
| hg19:Y:17129286-A-G hg38:Y:15017406-A-G | ** | |||||||
| hg19:Y:17137110-T-C hg38:Y:15025230-T-C | ** | |||||||
| hg19:Y:17182269-G-T hg38:Y:15070389-G-T | ** | |||||||
| hg19:Y:17204216-C-A hg38:Y:15092336-C-A | ** | |||||||
| hg19:Y:17545713-G-A hg38:Y:15433833-G-A | ** | |||||||
| hg19:Y:17666460-C-A hg38:Y:15554580-C-A | ** | |||||||
| hg19:Y:17713889-T-G hg38:Y:15602009-T-G | ** | |||||||
| hg19:Y:17750893-C-A hg38:Y:15639013-C-A | ** | |||||||
| hg19:Y:17798985-C-A hg38:Y:15687105-C-A | ** | |||||||
| hg19:Y:17813616-C-A hg38:Y:15701736-C-A | ** | |||||||
| hg19:Y:17850169-G-T hg38:Y:15738289-G-T | ** | |||||||
| hg19:Y:17854405-G-T hg38:Y:15742525-G-T | ** | |||||||
| hg19:Y:18161200-TTC-T hg38:Y:16049320-TTC-T | ** | |||||||
| hg19:Y:18236334-C-A hg38:Y:16124454-C-A | ** | |||||||
| hg19:Y:18295774-T-TA hg38:Y:16183894-T-TA | P6_Prx | ** | ||||||
| hg19:Y:18365730-C-A hg38:Y:16253850-C-A | P6_Prx | ** | ||||||
| hg19:Y:18421587-C-A hg38:Y:16309707-C-A | P6_Gap | ** | ||||||
| hg19:Y:18857763-A-C hg38:Y:16745883-A-C | ** | |||||||
| hg19:Y:19035792-C-A hg38:Y:16923912-C-A | ** | |||||||
| hg19:Y:19295531-C-G hg38:Y:17183651-C-G | ** | |||||||
| hg19:Y:19295547-T-C hg38:Y:17183667-T-C | ** | |||||||
| hg19:Y:19298358-G-T hg38:Y:17186478-G-T | ** | |||||||
| hg19:Y:19518305-C-A hg38:Y:17406425-C-A | ** | |||||||
| hg19:Y:19644684-T-G hg38:Y:17532804-T-G | P5_Prx | ** | ||||||
| hg19:Y:20043566-C-A hg38:Y:17931686-C-A | P5_Prx | ** | ||||||
| hg19:Y:20229286-C-A hg38:Y:18067400-C-A | P5_Dst | ** | ||||||
| hg19:Y:20534783-A-G hg38:Y:18372897-A-G | P5_Dst | ** | ||||||
| hg19:Y:21079526-C-A hg38:Y:18917640-C-A | ** | |||||||
| hg19:Y:21104841-G-A hg38:Y:18942955-G-A | FT25102 | ** | ||||||
| hg19:Y:21147984-C-T hg38:Y:18986098-C-T | ** | |||||||
| hg19:Y:21534713-C-A hg38:Y:19372827-C-A | ** | |||||||
| hg19:Y:21926451-C-A hg38:Y:19764565-C-A | ** | |||||||
| hg19:Y:21994094-A-C hg38:Y:19832208-A-C | ** | |||||||
| hg19:Y:22037333-C-A hg38:Y:19875447-C-A | ** | |||||||
| hg19:Y:22078074-C-A hg38:Y:19916188-C-A | ** | |||||||
| hg19:Y:22581237-C-A hg38:Y:20419351-C-A | ** | |||||||
| hg19:Y:23052655-C-A hg38:Y:20890769-C-A | ** | |||||||
| hg19:Y:23411929-C-A hg38:Y:21250043-C-A | ** | |||||||
| hg19:Y:23483373-C-A hg38:Y:21321487-C-A | ** | |||||||
| hg19:Y:23577163-G-A hg38:Y:21415277-G-A | ** | |||||||
| hg19:Y:23855679-G-T hg38:Y:21693793-G-T | ** | |||||||
| hg19:Y:24408479-C-A hg38:Y:22262332-C-A | ** | |||||||
| hg19:Y:24430106-C-A hg38:Y:22283959-C-A | ** | |||||||
| hg19:Y:24440045-T-A hg38:Y:22293898-T-A | ** | |||||||
| hg19:Y:24485397-A-G hg38:Y:22339250-A-G | ** | |||||||
| hg19:Y:26063049-A-T hg38:Y:23916902-A-T | P1_Y1 | ** | ||||||
| hg19:Y:26206161-G-T hg38:Y:24060014-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26970902-G-A hg38:Y:24824755-G-A | P1_r4 | ** | ||||||
| hg19:Y:27827799-G-T hg38:Y:25681652-G-T | FGC52243 | P1_Y2 | ** | |||||
| hg19:Y:28601078-T-A hg38:Y:26454931-T-A | ** | |||||||
| hg19:Y:28601079-C-T hg38:Y:26454932-C-T | ** | |||||||
| hg19:Y:28601084-A-C hg38:Y:26454937-A-C | ** | |||||||
| hg19:Y:28601092-T-A hg38:Y:26454945-T-A | ** | |||||||
| hg19:Y:28601095-C-A hg38:Y:26454948-C-A | ** | |||||||
| hg19:Y:28743604-G-T hg38:Y:26597457-G-T | ** | |||||||
| hg38:Y:56752188-A-T | ** | |||||||
| hg38:Y:56763492-G-C | ** | |||||||
| hg38:Y:56850403-GC-G | ** | |||||||
| hg38:Y:56850407-A-AC | ** | |||||||
| hg38:Y:56862325-G-T | ** | |||||||
| hg38:Y:56871563-G-T | ** | |||||||
| hg19:Y:6335209-A-AT hg38:Y:6467168-A-AT | IR3_Dst | ** | ||||||
| hg19:Y:6335202-AT-A hg38:Y:6467161-AT-A | IR3_Dst | ** | ||||||
| hg19:Y:14101106-A-C hg38:Y:11980400-A-C | ** | |||||||
| hg19:Y:15012652-G-C hg38:Y:12900740-G-C | ** | |||||||
| hg19:Y:16999712-C-T hg38:Y:14887832-C-T | ** | |||||||
| hg19:Y:17669716-T-C hg38:Y:15557836-T-C | ** | |||||||
| hg19:Y:19831910-A-G hg38:Y:17720030-A-G | P5_Prx | ** | ||||||
| hg19:Y:19831911-A-T hg38:Y:17720031-A-T | P5_Prx | ** | ||||||
| hg19:Y:19831920-A-AAAT hg38:Y:17720040-A-AAAT | P5_Prx | 10×AC | ** | |||||
| hg19:Y:21352536-G-A hg38:Y:19190650-G-A | ** | |||||||
| hg19:Y:21352554-G-A hg38:Y:19190668-G-A | ** | |||||||
| hg19:Y:21438209-A-G hg38:Y:19276323-A-G | ** | |||||||
| hg19:Y:21746236-T-C hg38:Y:19584350-T-C | ** | |||||||
| hg19:Y:21929500-A-G hg38:Y:19767614-A-G | ** | |||||||
| hg19:Y:23049679-A-G hg38:Y:20887793-A-G | ** | |||||||
| hg19:Y:27991744-A-G hg38:Y:25845597-A-G | P1_Y2 | ** | ||||||
| hg19:Y:8535223-TG-T hg38:Y:8667182-TG-T | *** | |||||||
| hg19:Y:14512661-C-A hg38:Y:12400866-C-A | CTS2838 | *** | ||||||
| hg19:Y:13811198-G-A hg38:Y:11690492-G-A | DYZ17 | *** | ||||||
| hg19:Y:6368815-G-T hg38:Y:6500774-G-T | FT198103 | *** | ||||||
| hg38:Y:10926677-CCGTTG-C | *** | |||||||
| hg38:Y:56835738-C-T | *** | |||||||
| hg19:Y:6491101-C-A hg38:Y:6623060-C-A | *** | |||||||
| hg19:Y:16375211-C-A hg38:Y:14263331-C-A | Y96152 | *** | ||||||
| hg38:Y:10659256-G-T | *** | |||||||
| hg19:Y:28608035-C-A hg38:Y:26461888-C-A | *** | |||||||
| hg38:Y:10935559-GTCCATTCCAT-G | *** | |||||||
| hg19:Y:9771998-C-A hg38:Y:9934389-C-A | *** | |||||||
| hg19:Y:23841178-G-T hg38:Y:21679292-G-T | *** | |||||||
| hg19:Y:15501996-C-A hg38:Y:13390116-C-A | *** | |||||||
| hg38:Y:10988702-G-T | *** | |||||||
| hg19:Y:7100804-C-A hg38:Y:7232763-C-A | *** | |||||||
| hg19:Y:4567274-C-A hg38:Y:4699233-C-A | *** | |||||||
| hg19:Y:13487803-G-C hg38:Y:11332127-G-C | *** | |||||||
| hg38:Y:10892759-G-T | *** | |||||||
| hg38:Y:10973063-C-A | *** | |||||||
| hg19:Y:21950613-C-A hg38:Y:19788727-C-A | *** | |||||||
| hg19:Y:28773615-C-A hg38:Y:26627468-C-A | *** | |||||||
| hg19:Y:5684791-C-A hg38:Y:5816750-C-A | *** | |||||||
| hg38:Y:10845698-T-A,C | *** | |||||||
| hg19:Y:14588809-G-T hg38:Y:12477009-G-T | *** | |||||||
| hg38:Y:10755408-G-A,C | *** | |||||||
| hg19:Y:16085837-C-A hg38:Y:13973957-C-A | *** | |||||||
| hg19:Y:8525394-C-A hg38:Y:8657353-C-A | *** | |||||||
| hg19:Y:13466319-A-G hg38:Y:11310643-A-G | *** | |||||||
| hg19:Y:2892773-C-A hg38:Y:3024732-C-A | *** | |||||||
| hg19:Y:3148443-C-A hg38:Y:3280402-C-A | *** | |||||||
| hg19:Y:4243572-C-T hg38:Y:4375531-C-T | *** | |||||||
| hg19:Y:5904993-T-C hg38:Y:6036952-T-C | *** | |||||||
| hg19:Y:6649301-C-A hg38:Y:6781260-C-A | *** | |||||||
| hg19:Y:6854462-G-A hg38:Y:6986421-G-A | *** | |||||||
| hg19:Y:7042899-G-T hg38:Y:7174858-G-T | *** | |||||||
| hg19:Y:7133919-C-A hg38:Y:7265878-C-A | *** | |||||||
| hg19:Y:7661734-C-T hg38:Y:7793693-C-T | *** | |||||||
| hg19:Y:8151727-C-A hg38:Y:8283686-C-A | *** | |||||||
| hg19:Y:8165932-G-T hg38:Y:8297891-G-T | *** | |||||||
| hg19:Y:8649469-G-T hg38:Y:8781428-G-T | *** | |||||||
| hg19:Y:8701425-C-A hg38:Y:8833384-C-A | *** | |||||||
| hg19:Y:8752638-C-A hg38:Y:8884597-C-A | *** | |||||||
| hg19:Y:9173360-G-A hg38:Y:9335751-G-A | *** | |||||||
| hg19:Y:9457129-C-A hg38:Y:9619520-C-A | *** | |||||||
| hg19:Y:9849905-C-A hg38:Y:10012296-C-A | *** | |||||||
| hg19:Y:9855878-C-A hg38:Y:10018269-C-A | *** | |||||||
| hg19:Y:10023426-C-A hg38:Y:10185817-C-A | *** | |||||||
| hg19:Y:10057561-C-A hg38:Y:10219952-C-A | *** | |||||||
| hg38:Y:10656868-C-A | *** | |||||||
| hg38:Y:10669509-C-A,CGGATG | *** | |||||||
| hg38:Y:10677670-C-A | *** | |||||||
| hg38:Y:10775240-C-A | *** | |||||||
| hg38:Y:10879727-C-T | *** | |||||||
| hg38:Y:10882850-C-A | *** | |||||||
| hg38:Y:10988707-C-G | *** | |||||||
| hg38:Y:11036092-C-CAACAT,T | *** | |||||||
| hg19:Y:13571040-A-C hg38:Y:11415364-A-C | *** | |||||||
| hg19:Y:14233076-C-A hg38:Y:12112370-C-A | *** | |||||||
| hg19:Y:14265209-C-A hg38:Y:12144503-C-A | *** | |||||||
| hg19:Y:14459460-C-A hg38:Y:12338733-C-A | *** | |||||||
| hg19:Y:14482114-G-T hg38:Y:12361383-G-T | *** | |||||||
| hg19:Y:14639744-G-A hg38:Y:12527813-G-A | *** | |||||||
| hg19:Y:14722143-C-A hg38:Y:12610211-C-A | *** | |||||||
| hg19:Y:14722405-C-A hg38:Y:12610473-C-A | *** | |||||||
| hg19:Y:15025184-C-A hg38:Y:12913272-C-A | *** | |||||||
| hg19:Y:15222802-C-A hg38:Y:13110888-C-A | *** | |||||||
| hg19:Y:15656647-T-C hg38:Y:13544767-T-C | *** | |||||||
| hg19:Y:15747376-G-T hg38:Y:13635496-G-T | *** | |||||||
| hg19:Y:15822528-T-C hg38:Y:13710648-T-C | *** | |||||||
| hg19:Y:15845849-C-A hg38:Y:13733969-C-A | *** | |||||||
| hg19:Y:15882443-C-A hg38:Y:13770563-C-A | *** | |||||||
| hg19:Y:16019303-C-A hg38:Y:13907423-C-A | *** | |||||||
| hg19:Y:16253195-C-A hg38:Y:14141315-C-A | *** | |||||||
| hg19:Y:16603908-C-A hg38:Y:14492028-C-A | *** | |||||||
| hg19:Y:16804824-CT-C hg38:Y:14692944-CT-C | *** | |||||||
| hg19:Y:17303099-C-A hg38:Y:15191219-C-A | *** | |||||||
| hg19:Y:17876105-C-A hg38:Y:15764225-C-A | *** | |||||||
| hg19:Y:17896160-G-T hg38:Y:15784280-G-T | *** | |||||||
| hg19:Y:17924345-C-A hg38:Y:15812465-C-A | *** | |||||||
| hg19:Y:17976438-C-A hg38:Y:15864558-C-A | BY118878 | *** | ||||||
| hg19:Y:18269643-C-A hg38:Y:16157763-C-A | *** | |||||||
| hg19:Y:18573764-C-A hg38:Y:16461884-C-A | *** | |||||||
| hg19:Y:18777581-C-A hg38:Y:16665701-C-A | *** | |||||||
| hg19:Y:19052480-A-T hg38:Y:16940600-A-T | *** | |||||||
| hg19:Y:19236968-G-T hg38:Y:17125088-G-T | *** | |||||||
| hg19:Y:19423626-C-A hg38:Y:17311746-C-A | *** | |||||||
| hg19:Y:19522852-C-A hg38:Y:17410972-C-A | *** | |||||||
| hg19:Y:20063842-C-A hg38:Y:17951962-C-A | P5_Gap | *** | ||||||
| hg19:Y:21253589-A-AT hg38:Y:19091703-A-AT | *** | |||||||
| hg19:Y:21468580-C-A hg38:Y:19306694-C-A | FTA24842 | *** | ||||||
| hg19:Y:21560092-C-A hg38:Y:19398206-C-A | *** | |||||||
| hg19:Y:21693891-C-A hg38:Y:19532005-C-A | *** | |||||||
| hg19:Y:21722293-G-T hg38:Y:19560407-G-T | *** | |||||||
| hg19:Y:22018226-G-A hg38:Y:19856340-G-A | *** | |||||||
| hg19:Y:22039744-C-A hg38:Y:19877858-C-A | *** | |||||||
| hg19:Y:22518753-TAA-T,TAAA hg38:Y:20356867-TAA-T,TAAA | 14×A | *** | ||||||
| hg19:Y:23042865-C-A hg38:Y:20880979-C-A | *** | |||||||
| hg19:Y:23650887-G-T hg38:Y:21489001-G-T | *** | |||||||
| hg19:Y:23745106-G-T hg38:Y:21583220-G-T | *** | |||||||
| hg19:Y:23829353-G-T hg38:Y:21667467-G-T | *** | |||||||
| hg19:Y:24399686-C-A hg38:Y:22253539-C-A | *** | |||||||
| hg19:Y:24502918-C-A hg38:Y:22356771-C-A | *** | |||||||
| hg19:Y:25937887-C-A hg38:Y:23791740-C-A | P1_Y1 | *** | ||||||
| hg19:Y:8002387-A-G hg38:Y:8134346-A-G | *** | |||||||
| hg19:Y:4163728-G-A hg38:Y:4295687-G-A | *** | |||||||
| hg19:Y:7579224-T-C hg38:Y:7711183-T-C | *** | |||||||
| hg19:Y:10043240-G-A hg38:Y:10205631-G-A | *** | |||||||
| hg19:Y:13292305-T-A hg38:Y:11136629-T-A | *** | |||||||
| hg19:Y:13628148-G-A hg38:Y:11472472-G-A | *** | |||||||
| hg19:Y:15940235-A-G hg38:Y:13828355-A-G | *** | |||||||
| hg19:Y:16505988-CTTTTTTTT-C,CTTT hg38:Y:14394108-CTTTTTTTT-C,CTTT | 31×T | *** | ||||||
| hg19:Y:17406962-C-G hg38:Y:15295082-C-G | *** | |||||||
| hg19:Y:21335435-T-C hg38:Y:19173549-T-C | *** | |||||||
| hg19:Y:27503248-T-A hg38:Y:25357101-T-A | P1_Y2 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B82361 | 8708256 | 7108406 | 7054451 |
| Kit: B82361 | 14932769 | 9347949 | 8309997 |
| Used in age calculations | 14932769 | 9347949 | 8309997 |
| Counts of SNPs | 2 | 1 |
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