MacCarthy
BigY2: 639321MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 639321 |
|---|---|---|---|---|---|---|---|
| hg19:Y:28817547-T-C hg38:Y:26671400-T-C | A* | ||||||
| hg19:Y:6337770-C-G hg38:Y:6469729-C-G | IR3_Dst | A* | |||||
| hg19:Y:25564675-G-A hg38:Y:23418528-G-A | P1_gr1 | A* | |||||
| hg19:Y:2811172-A-G hg38:Y:2943131-A-G | BY56584 | Y | Y | + | |||
| hg19:Y:6896627-A-G hg38:Y:7028586-A-G | BY62050 | Y | Y | + | |||
| hg19:Y:18998382-T-C hg38:Y:16886502-T-C | BY125377 | Y | Y | + | |||
| hg19:Y:19006188-G-C hg38:Y:16894308-G-C | BY125460 | Y | Y | + | |||
| hg19:Y:23630464-C-A hg38:Y:21468578-C-A | BY146860 | Y | Y | + | |||
| hg19:Y:14466530-AATCT-A hg38:Y:12345803-AATCT-A | 9×ATCT | * | |||||
| hg19:Y:9533866-A-AT hg38:Y:9696257-A-AT | IR3_Prx | 14×T | * | ||||
| hg19:Y:16492547-T-C hg38:Y:14380667-T-C | ** | ||||||
| hg19:Y:18084124-T-A hg38:Y:15972244-T-A | PF4573 F2707 | ** | |||||
| hg19:Y:8843535-TA-T hg38:Y:8975494-TA-T | ** | ||||||
| hg19:Y:21468591-C-A hg38:Y:19306705-C-A | M5536 PF1811 | ** | |||||
| hg19:Y:23194816-C-G hg38:Y:21032930-C-G | PH5352 | ** | |||||
| hg19:Y:22851518-G-T hg38:Y:20689632-G-T | CTS10947 PF4829 AM01346 | ** | |||||
| hg19:Y:59008508-C-T hg38:Y:56862361-C-T | ** | ||||||
| hg19:Y:8119053-G-GTT hg38:Y:8251012-G-GTT | 16×T | ** | |||||
| hg19:Y:24422580-G-C hg38:Y:22276433-G-C | ** | ||||||
| hg19:Y:24422581-G-A hg38:Y:22276434-G-A | ** | ||||||
| hg19:Y:24422583-A-T hg38:Y:22276436-A-T | ** | ||||||
| hg19:Y:22508712-A-C hg38:Y:20346826-A-C | DYZ19 | ** | |||||
| hg19:Y:7090139-C-CT hg38:Y:7222098-C-CT | 10×T | ** | |||||
| hg38:Y:10889807-T-C | ** | ||||||
| hg38:Y:10826248-T-C | ** | ||||||
| hg19:Y:9935029-C-A hg38:Y:10097420-C-A | ** | ||||||
| hg38:Y:56827622-G-T | ** | ||||||
| hg19:Y:13898783-C-A hg38:Y:11778077-C-A | ** | ||||||
| hg19:Y:5824669-C-A hg38:Y:5956628-C-A | ** | ||||||
| hg19:Y:6028909-C-A hg38:Y:6160868-C-A | ** | ||||||
| hg19:Y:27398546-G-A hg38:Y:25252399-G-A | P1_g3 | ** | |||||
| hg19:Y:13974243-G-T hg38:Y:11853537-G-T | ** | ||||||
| hg19:Y:16528284-G-GA hg38:Y:14416404-G-GA | 9×A | ** | |||||
| hg38:Y:10892556-TC-T | ** | ||||||
| hg38:Y:11001504-G-A | ** | ||||||
| hg38:Y:10840049-T-C | ** | ||||||
| hg38:Y:10821931-C-G | ** | ||||||
| hg19:Y:4080964-C-A hg38:Y:4212923-C-A | ** | ||||||
| hg19:Y:16051058-C-A hg38:Y:13939178-C-A | ** | ||||||
| hg19:Y:18088306-C-A hg38:Y:15976426-C-A | ** | ||||||
| hg19:Y:13457739-TC-T hg38:Y:11302063-TC-T | ** | ||||||
| hg38:Y:10880501-T-C | ** | ||||||
| hg19:Y:3990693-G-T hg38:Y:4122652-G-T | ** | ||||||
| hg38:Y:10755329-T-G | ** | ||||||
| hg19:Y:19071644-C-A hg38:Y:16959764-C-A | ** | ||||||
| hg19:Y:6714107-G-T hg38:Y:6846066-G-T | ** | ||||||
| hg38:Y:10889786-A-T | ** | ||||||
| hg38:Y:10892554-A-AC | ** | ||||||
| hg38:Y:56844490-G-C | ** | ||||||
| hg19:Y:9926735-C-A hg38:Y:10089126-C-A | ** | ||||||
| hg19:Y:21211400-C-A hg38:Y:19049514-C-A | ** | ||||||
| hg19:Y:19187704-C-T hg38:Y:17075824-C-T | ** | ||||||
| hg19:Y:7418072-TC-T hg38:Y:7550031-TC-T | ** | ||||||
| hg19:Y:14262318-C-A hg38:Y:12141612-C-A | ** | ||||||
| hg19:Y:21049220-C-A hg38:Y:18887334-C-A | ** | ||||||
| hg19:Y:7305542-CT-C hg38:Y:7437501-CT-C | 10×T | ** | |||||
| hg19:Y:24422588-T-C hg38:Y:22276441-T-C | ** | ||||||
| hg19:Y:17789788-CT-C hg38:Y:15677908-CT-C | 9×T | ** | |||||
| hg19:Y:19521969-T-A hg38:Y:17410089-T-A | ** | ||||||
| hg19:Y:19266746-C-A hg38:Y:17154866-C-A | ** | ||||||
| hg38:Y:10889766-A-T | ** | ||||||
| hg19:Y:19531369-C-A hg38:Y:17419489-C-A | ** | ||||||
| hg19:Y:19415371-C-A hg38:Y:17303491-C-A | ** | ||||||
| hg38:Y:10763268-CTCCAT-C | ** | ||||||
| hg19:Y:28688954-C-A hg38:Y:26542807-C-A | ** | ||||||
| hg19:Y:4561323-C-A hg38:Y:4693282-C-A | ** | ||||||
| hg19:Y:14656147-C-A hg38:Y:12544212-C-A | ** | ||||||
| hg19:Y:22147348-C-A hg38:Y:19985462-C-A | ** | ||||||
| hg19:Y:4533814-C-A hg38:Y:4665773-C-A | ** | ||||||
| hg38:Y:10880556-C-G | ** | ||||||
| hg38:Y:10880557-T-A | ** | ||||||
| hg38:Y:10880558-C-A | ** | ||||||
| hg38:Y:10880589-T-C | ** | ||||||
| hg38:Y:10880618-C-A | ** | ||||||
| hg38:Y:10880621-T-C | ** | ||||||
| hg19:Y:19216320-C-A hg38:Y:17104440-C-A | ** | ||||||
| hg38:Y:11003744-A-T | ** | ||||||
| hg19:Y:19472885-C-A hg38:Y:17361005-C-A | ** | ||||||
| hg38:Y:11001537-T-C | ** | ||||||
| hg19:Y:21695904-C-A hg38:Y:19534018-C-A | ** | ||||||
| hg38:Y:10899915-G-T | ** | ||||||
| hg19:Y:15868085-C-A hg38:Y:13756205-C-A | ** | ||||||
| hg38:Y:11003728-C-CT | ** | ||||||
| hg38:Y:11003729-AC-A | ** | ||||||
| hg19:Y:8848528-C-A hg38:Y:8980487-C-A | ** | ||||||
| hg38:Y:11001507-A-G | ** | ||||||
| hg19:Y:27424011-G-T hg38:Y:25277864-G-T | P1_g3 | ** | |||||
| hg19:Y:28621740-G-T hg38:Y:26475593-G-T | ** | ||||||
| hg38:Y:56840676-C-A | ** | ||||||
| hg19:Y:3848999-C-A hg38:Y:3980958-C-A | ** | ||||||
| hg19:Y:27862605-AGG-A hg38:Y:25716458-AGG-A | P1_Y2 | ** | |||||
| hg19:Y:13493776-C-A hg38:Y:11338100-C-A | ** | ||||||
| hg19:Y:2803384-C-A hg38:Y:2935343-C-A | ** | ||||||
| hg19:Y:8686410-C-A hg38:Y:8818369-C-A | ** | ||||||
| hg38:Y:10880499-T-A | ** | ||||||
| hg38:Y:10880512-A-C | ** | ||||||
| hg38:Y:10880513-A-G | ** | ||||||
| hg38:Y:10880520-T-TC | ** | ||||||
| hg19:Y:18704436-CT-C hg38:Y:16592556-CT-C | 8×T | ** | |||||
| hg19:Y:13457825-C-A hg38:Y:11302149-C-A | ** | ||||||
| hg19:Y:15780148-C-A hg38:Y:13668268-C-A | ** | ||||||
| hg19:Y:16410130-C-A hg38:Y:14298250-C-A | ** | ||||||
| hg38:Y:10866079-T-A | ** | ||||||
| hg38:Y:10880347-C-G | ** | ||||||
| hg19:Y:23803423-A-AT hg38:Y:21641537-A-AT | 9×T | ** | |||||
| hg19:Y:15566855-G-T hg38:Y:13454975-G-T | ** | ||||||
| hg19:Y:27862619-G-C hg38:Y:25716472-G-C | P1_Y2 | ** | |||||
| hg19:Y:24459388-T-TC hg38:Y:22313241-T-TC | ** | ||||||
| hg38:Y:10954191-T-A | ** | ||||||
| hg19:Y:16018853-C-A hg38:Y:13906973-C-A | ** | ||||||
| hg19:Y:16644842-C-A hg38:Y:14532962-C-A | ** | ||||||
| hg38:Y:10880281-C-T | ** | ||||||
| hg19:Y:14720141-G-T hg38:Y:12608209-G-T | ** | ||||||
| hg38:Y:10912769-C-A | ** | ||||||
| hg19:Y:7033549-C-A hg38:Y:7165508-C-A | ** | ||||||
| hg38:Y:10847587-C-A | ** | ||||||
| hg19:Y:23577050-C-A hg38:Y:21415164-C-A | ** | ||||||
| hg19:Y:13846565-C-A hg38:Y:11725859-C-A | DYZ17 | ** | |||||
| hg38:Y:10764752-C-A | ** | ||||||
| hg38:Y:10997064-T-C | ** | ||||||
| hg19:Y:15402296-C-A hg38:Y:13290416-C-A | ** | ||||||
| hg19:Y:18239019-C-A hg38:Y:16127139-C-A | ** | ||||||
| hg19:Y:6833386-C-A hg38:Y:6965345-C-A | ** | ||||||
| hg38:Y:10896322-C-G | ** | ||||||
| hg19:Y:27435933-C-A hg38:Y:25289786-C-A | P1_Y2 | ** | |||||
| hg19:Y:15903986-A-C hg38:Y:13792106-A-C | ** | ||||||
| hg19:Y:15659101-C-A hg38:Y:13547221-C-A | ** | ||||||
| hg19:Y:22970052-G-A hg38:Y:20808166-G-A | ** | ||||||
| hg19:Y:13454580-T-C hg38:Y:11298904-T-C | ** | ||||||
| hg38:Y:10851140-A-T | ** | ||||||
| hg19:Y:25733068-C-A hg38:Y:23586921-C-A | P1_b3 | ** | |||||
| hg19:Y:13722612-C-A hg38:Y:11566936-C-A | DYZ17 | ** | |||||
| hg38:Y:10688468-C-A | ** | ||||||
| hg19:Y:22835272-C-A hg38:Y:20673386-C-A | ** | ||||||
| hg19:Y:2683941-G-A hg38:Y:2815900-G-A | ** | ||||||
| hg19:Y:2693351-G-A hg38:Y:2825310-G-A | ** | ||||||
| hg19:Y:2721952-C-T hg38:Y:2853911-C-T | ** | ||||||
| hg19:Y:2721958-G-C hg38:Y:2853917-G-C | ** | ||||||
| hg19:Y:2721960-A-G hg38:Y:2853919-A-G | ** | ||||||
| hg19:Y:2721964-T-C hg38:Y:2853923-T-C | ** | ||||||
| hg19:Y:2721966-C-T hg38:Y:2853925-C-T | BY56004 | ** | |||||
| hg19:Y:2752492-C-A hg38:Y:2884451-C-A | ** | ||||||
| hg19:Y:2784597-T-G hg38:Y:2916556-T-G | ** | ||||||
| hg19:Y:2784636-T-G hg38:Y:2916595-T-G | ** | ||||||
| hg19:Y:2820060-C-A hg38:Y:2952019-C-A | ** | ||||||
| hg19:Y:2820061-A-G hg38:Y:2952020-A-G | ** | ||||||
| hg19:Y:2820062-C-T hg38:Y:2952021-C-T | ** | ||||||
| hg19:Y:2824083-T-G hg38:Y:2956042-T-G | ** | ||||||
| hg19:Y:2947966-T-G hg38:Y:3079925-T-G | ** | ||||||
| hg19:Y:3047951-A-C hg38:Y:3179910-A-C | ** | ||||||
| hg19:Y:3076500-C-A hg38:Y:3208459-C-A | ** | ||||||
| hg19:Y:3104506-G-T hg38:Y:3236465-G-T | ** | ||||||
| hg19:Y:3161453-C-A hg38:Y:3293412-C-A | ** | ||||||
| hg19:Y:3861044-C-A hg38:Y:3993003-C-A | ** | ||||||
| hg19:Y:3876625-G-T hg38:Y:4008584-G-T | ** | ||||||
| hg19:Y:4065417-GA-G hg38:Y:4197376-GA-G | 8×A | ** | |||||
| hg19:Y:4700980-G-T hg38:Y:4832939-G-T | ** | ||||||
| hg19:Y:5123208-A-G hg38:Y:5255167-A-G | ** | ||||||
| hg19:Y:5298539-C-A hg38:Y:5430498-C-A | ** | ||||||
| hg19:Y:5449139-A-G hg38:Y:5581098-A-G | ** | ||||||
| hg19:Y:5620990-C-A hg38:Y:5752949-C-A | ** | ||||||
| hg19:Y:5824636-C-A hg38:Y:5956595-C-A | ** | ||||||
| hg19:Y:5873577-C-A hg38:Y:6005536-C-A | ** | ||||||
| hg19:Y:6035605-G-T hg38:Y:6167564-G-T | ** | ||||||
| hg19:Y:6179541-G-T hg38:Y:6311500-G-T | IR3_Dst | ** | |||||
| hg19:Y:6588455-C-A hg38:Y:6720414-C-A | ** | ||||||
| hg19:Y:6699367-TTTTC-T hg38:Y:6831326-TTTTC-T | 4×TTTC | ** | |||||
| hg19:Y:6936188-C-A hg38:Y:7068147-C-A | ** | ||||||
| hg19:Y:7101212-G-A hg38:Y:7233171-G-A | ** | ||||||
| hg19:Y:7165325-T-G hg38:Y:7297284-T-G | ** | ||||||
| hg19:Y:7186081-C-A hg38:Y:7318040-C-A | ** | ||||||
| hg19:Y:7206970-C-A hg38:Y:7338929-C-A | ** | ||||||
| hg19:Y:7271256-T-A hg38:Y:7403215-T-A | ** | ||||||
| hg19:Y:7289477-C-A hg38:Y:7421436-C-A | ** | ||||||
| hg19:Y:7312626-G-T hg38:Y:7444585-G-T | ** | ||||||
| hg19:Y:7364061-T-C hg38:Y:7496020-T-C | ** | ||||||
| hg19:Y:7417504-G-T hg38:Y:7549463-G-T | ** | ||||||
| hg19:Y:7567905-C-A hg38:Y:7699864-C-A | ** | ||||||
| hg19:Y:7582009-A-C hg38:Y:7713968-A-C | ** | ||||||
| hg19:Y:7638857-C-A hg38:Y:7770816-C-A | ** | ||||||
| hg19:Y:7649210-C-A hg38:Y:7781169-C-A | ** | ||||||
| hg19:Y:7781537-C-A hg38:Y:7913496-C-A | ** | ||||||
| hg19:Y:7782856-G-A hg38:Y:7914815-G-A | ** | ||||||
| hg19:Y:7940414-T-C hg38:Y:8072373-T-C | ** | ||||||
| hg19:Y:7987068-T-A hg38:Y:8119027-T-A | ** | ||||||
| hg19:Y:7992302-G-T hg38:Y:8124261-G-T | ** | ||||||
| hg19:Y:8022790-C-A hg38:Y:8154749-C-A | FGC37549 | ** | |||||
| hg19:Y:8039943-C-G hg38:Y:8171902-C-G | FT236101 | ** | |||||
| hg19:Y:8054643-C-A hg38:Y:8186602-C-A | ** | ||||||
| hg19:Y:8102140-G-T hg38:Y:8234099-G-T | ** | ||||||
| hg19:Y:8126304-A-C hg38:Y:8258263-A-C | ** | ||||||
| hg19:Y:8213457-A-C hg38:Y:8345416-A-C | ** | ||||||
| hg19:Y:8253605-T-G hg38:Y:8385564-T-G | ** | ||||||
| hg19:Y:8604192-TC-T hg38:Y:8736151-TC-T | ** | ||||||
| hg19:Y:8732337-A-C hg38:Y:8864296-A-C | ** | ||||||
| hg19:Y:8737420-C-A hg38:Y:8869379-C-A | ** | ||||||
| hg19:Y:9002976-G-T hg38:Y:9165367-G-T | ** | ||||||
| hg19:Y:9013022-C-T hg38:Y:9175413-C-T | ** | ||||||
| hg19:Y:9013026-G-C hg38:Y:9175417-G-C | ** | ||||||
| hg19:Y:9111466-C-T hg38:Y:9273857-C-T | ** | ||||||
| hg19:Y:9467433-C-A hg38:Y:9629824-C-A | ** | ||||||
| hg19:Y:9836910-G-A hg38:Y:9999301-G-A | ** | ||||||
| hg19:Y:9888161-G-T hg38:Y:10050552-G-T | ** | ||||||
| hg38:Y:10656387-C-A | ** | ||||||
| hg38:Y:10663078-C-T | ** | ||||||
| hg38:Y:10667898-C-A | ** | ||||||
| hg38:Y:10687458-C-A | ** | ||||||
| hg38:Y:10693003-C-A | ** | ||||||
| hg38:Y:10770974-CTCCAT-C | ** | ||||||
| hg38:Y:10773136-C-A | ** | ||||||
| hg38:Y:10789894-T-G | ** | ||||||
| hg38:Y:10798278-C-A | ** | ||||||
| hg38:Y:10803886-C-A | ** | ||||||
| hg38:Y:10826188-C-A | ** | ||||||
| hg38:Y:10838925-C-A | ** | ||||||
| hg38:Y:10839989-TTCCAC-T | ** | ||||||
| hg38:Y:10840014-ATCCAT-A | ** | ||||||
| hg38:Y:10846211-C-A | ** | ||||||
| hg38:Y:10855796-C-A | ** | ||||||
| hg38:Y:10902083-C-A | ** | ||||||
| hg38:Y:10946843-A-G | ** | ||||||
| hg38:Y:10997075-C-G | ** | ||||||
| hg38:Y:10997092-TTCCAC-T | ** | ||||||
| hg38:Y:10997132-T-C | ** | ||||||
| hg19:Y:13262834-C-A hg38:Y:11107158-C-A | ** | ||||||
| hg19:Y:13319565-G-A hg38:Y:11163889-G-A | ** | ||||||
| hg19:Y:13523296-T-C hg38:Y:11367620-T-C | ** | ||||||
| hg19:Y:13722550-A-T hg38:Y:11566874-A-T | DYZ17 | ** | |||||
| hg19:Y:13722602-T-A hg38:Y:11566926-T-A | DYZ17 | ** | |||||
| hg19:Y:13722617-G-T hg38:Y:11566941-G-T | DYZ17 | ** | |||||
| hg38:Y:11646128-G-T | DYZ17 | ** | |||||
| hg19:Y:13921125-CAA-C hg38:Y:11800419-CAA-C | 10×A | ** | |||||
| hg19:Y:13935615-T-C hg38:Y:11814909-T-C | ** | ||||||
| hg19:Y:13936401-T-C hg38:Y:11815695-T-C | ** | ||||||
| hg19:Y:14059954-C-A hg38:Y:11939248-C-A | ** | ||||||
| hg19:Y:14145746-C-A hg38:Y:12025040-C-A | ** | ||||||
| hg19:Y:14281721-C-A hg38:Y:12161015-C-A | ** | ||||||
| hg19:Y:14293635-T-G hg38:Y:12172929-T-G | ** | ||||||
| hg19:Y:14295113-C-A hg38:Y:12174407-C-A | ** | ||||||
| hg19:Y:14356167-C-A hg38:Y:12235462-C-A | ** | ||||||
| hg19:Y:14431675-C-A hg38:Y:12310948-C-A | ** | ||||||
| hg19:Y:14443753-C-A hg38:Y:12323026-C-A | ** | ||||||
| hg19:Y:14578480-T-A hg38:Y:12466680-T-A | ** | ||||||
| hg19:Y:14849039-G-T hg38:Y:12737105-G-T | ** | ||||||
| hg19:Y:14957760-C-A hg38:Y:12845835-C-A | ** | ||||||
| hg19:Y:15068952-C-A hg38:Y:12957043-C-A | ** | ||||||
| hg19:Y:15406750-C-A hg38:Y:13294870-C-A | ** | ||||||
| hg19:Y:15422026-G-A hg38:Y:13310146-G-A | ** | ||||||
| hg19:Y:15513608-T-G hg38:Y:13401728-T-G | ** | ||||||
| hg19:Y:15529948-C-A hg38:Y:13418068-C-A | ** | ||||||
| hg19:Y:15714420-C-A hg38:Y:13602540-C-A | ** | ||||||
| hg19:Y:15912561-C-A hg38:Y:13800681-C-A | ** | ||||||
| hg19:Y:16029951-C-A hg38:Y:13918071-C-A | ** | ||||||
| hg19:Y:16134226-A-G hg38:Y:14022346-A-G | P8_Spc | ** | |||||
| hg19:Y:16134230-T-G hg38:Y:14022350-T-G | P8_Spc | ** | |||||
| hg19:Y:16333702-GT-G hg38:Y:14221822-GT-G | ** | ||||||
| hg19:Y:16424441-G-T hg38:Y:14312561-G-T | ** | ||||||
| hg19:Y:16440425-A-T hg38:Y:14328545-A-T | ** | ||||||
| hg19:Y:16485764-G-A hg38:Y:14373884-G-A | ** | ||||||
| hg19:Y:16516240-C-A hg38:Y:14404360-C-A | ** | ||||||
| hg19:Y:16625467-C-A hg38:Y:14513587-C-A | ** | ||||||
| hg19:Y:16638912-G-T hg38:Y:14527032-G-T | ** | ||||||
| hg19:Y:16877071-A-G hg38:Y:14765191-A-G | ** | ||||||
| hg19:Y:16881434-C-A hg38:Y:14769554-C-A | ** | ||||||
| hg19:Y:16896196-C-A hg38:Y:14784316-C-A | ** | ||||||
| hg19:Y:17191638-G-A hg38:Y:15079758-G-A | ** | ||||||
| hg19:Y:17208383-C-G hg38:Y:15096503-C-G | ** | ||||||
| hg19:Y:17212428-G-T hg38:Y:15100548-G-T | ** | ||||||
| hg19:Y:17240630-C-A hg38:Y:15128750-C-A | ** | ||||||
| hg19:Y:17275003-TAGATAGAC-T hg38:Y:15163123-TAGATAGAC-T | ** | ||||||
| hg19:Y:17298895-G-A hg38:Y:15187015-G-A | FT30479 | ** | |||||
| hg19:Y:17383761-C-A hg38:Y:15271881-C-A | ** | ||||||
| hg19:Y:17462141-C-A hg38:Y:15350261-C-A | ** | ||||||
| hg19:Y:17504852-G-T hg38:Y:15392972-G-T | ** | ||||||
| hg19:Y:17637811-C-A hg38:Y:15525931-C-A | ** | ||||||
| hg19:Y:17685748-T-A hg38:Y:15573868-T-A | ** | ||||||
| hg19:Y:17804558-C-A hg38:Y:15692678-C-A | ** | ||||||
| hg19:Y:17844197-G-T hg38:Y:15732317-G-T | ** | ||||||
| hg19:Y:17877026-G-A hg38:Y:15765146-G-A | ** | ||||||
| hg19:Y:17878426-G-A hg38:Y:15766546-G-A | ** | ||||||
| hg19:Y:17896243-A-G hg38:Y:15784363-A-G | ** | ||||||
| hg19:Y:18204232-CA-C hg38:Y:16092352-CA-C | ** | ||||||
| hg19:Y:18213437-C-A hg38:Y:16101557-C-A | ** | ||||||
| hg19:Y:18255083-G-A hg38:Y:16143203-G-A | ** | ||||||
| hg19:Y:18259310-C-A hg38:Y:16147430-C-A | ** | ||||||
| hg19:Y:18296635-G-T hg38:Y:16184755-G-T | P6_Prx | 18×CA | ** | ||||
| hg19:Y:18539003-C-A hg38:Y:16427123-C-A | ** | ||||||
| hg19:Y:18569643-C-A hg38:Y:16457763-C-A | ** | ||||||
| hg19:Y:18573767-C-A hg38:Y:16461887-C-A | ** | ||||||
| hg19:Y:18581872-T-C hg38:Y:16469992-T-C | ** | ||||||
| hg19:Y:18632922-G-GA hg38:Y:16521042-G-GA | ** | ||||||
| hg19:Y:18698603-CT-C hg38:Y:16586723-CT-C | ** | ||||||
| hg19:Y:18786857-A-G hg38:Y:16674977-A-G | ** | ||||||
| hg19:Y:18869118-C-T hg38:Y:16757238-C-T | ** | ||||||
| hg19:Y:19112664-T-C hg38:Y:17000784-T-C | ** | ||||||
| hg19:Y:19138952-C-A hg38:Y:17027072-C-A | ** | ||||||
| hg19:Y:19376263-A-T hg38:Y:17264383-A-T | ** | ||||||
| hg19:Y:19498189-C-A hg38:Y:17386309-C-A | ** | ||||||
| hg19:Y:19873684-G-C hg38:Y:17761804-G-C | P5_Prx | ** | |||||
| hg19:Y:21151594-A-T hg38:Y:18989708-A-T | ** | ||||||
| hg19:Y:21165390-C-G hg38:Y:19003504-C-G | FT237618 | ** | |||||
| hg19:Y:21254004-G-T hg38:Y:19092118-G-T | ** | ||||||
| hg19:Y:21353973-C-A hg38:Y:19192087-C-A | FGC1440 | ** | |||||
| hg19:Y:21457659-G-T hg38:Y:19295773-G-T | ** | ||||||
| hg19:Y:21592654-T-G hg38:Y:19430768-T-G | ** | ||||||
| hg19:Y:21617813-GA-G hg38:Y:19455927-GA-G | ** | ||||||
| hg19:Y:21700460-A-C hg38:Y:19538574-A-C | ** | ||||||
| hg19:Y:22180954-A-G hg38:Y:20019068-A-G | ** | ||||||
| hg19:Y:22208808-T-A hg38:Y:20046922-T-A | ** | ||||||
| hg19:Y:22527239-C-T hg38:Y:20365353-C-T | ** | ||||||
| hg19:Y:22527242-G-A hg38:Y:20365356-G-A | ** | ||||||
| hg19:Y:22538145-C-A hg38:Y:20376259-C-A | ** | ||||||
| hg19:Y:22585387-T-A hg38:Y:20423501-T-A | ** | ||||||
| hg19:Y:22587971-A-C hg38:Y:20426085-A-C | ** | ||||||
| hg19:Y:22600015-C-A hg38:Y:20438129-C-A | ** | ||||||
| hg19:Y:22650110-C-A hg38:Y:20488224-C-A | ** | ||||||
| hg19:Y:22725970-C-A hg38:Y:20564084-C-A | ** | ||||||
| hg19:Y:22734321-G-T hg38:Y:20572435-G-T | ** | ||||||
| hg19:Y:22802917-C-A hg38:Y:20641031-C-A | ** | ||||||
| hg19:Y:22818806-C-A hg38:Y:20656920-C-A | ** | ||||||
| hg19:Y:22882004-A-T hg38:Y:20720118-A-T | ** | ||||||
| hg19:Y:22916758-C-A hg38:Y:20754872-C-A | ** | ||||||
| hg19:Y:23002491-C-A hg38:Y:20840605-C-A | ** | ||||||
| hg19:Y:23042303-C-A hg38:Y:20880417-C-A | ** | ||||||
| hg19:Y:23119137-C-A hg38:Y:20957251-C-A | ** | ||||||
| hg19:Y:23264267-C-A hg38:Y:21102381-C-A | ** | ||||||
| hg19:Y:23464531-C-A hg38:Y:21302645-C-A | ** | ||||||
| hg19:Y:23493583-T-G hg38:Y:21331697-T-G | ** | ||||||
| hg19:Y:23561599-A-G hg38:Y:21399713-A-G | ** | ||||||
| hg19:Y:23576626-C-A hg38:Y:21414740-C-A | ** | ||||||
| hg19:Y:23597639-C-A hg38:Y:21435753-C-A | ** | ||||||
| hg19:Y:23840476-C-A hg38:Y:21678590-C-A | ** | ||||||
| hg19:Y:23958730-C-A hg38:Y:21812583-C-A | ** | ||||||
| hg19:Y:24422602-C-G hg38:Y:22276455-C-G | ** | ||||||
| hg19:Y:24422610-G-C hg38:Y:22276463-G-C | ** | ||||||
| hg19:Y:24459373-T-C hg38:Y:22313226-T-C | ** | ||||||
| hg19:Y:24459378-T-C hg38:Y:22313231-T-C | ** | ||||||
| hg19:Y:24459379-G-A hg38:Y:22313232-G-A | ** | ||||||
| hg19:Y:24507997-C-A hg38:Y:22361850-C-A | ** | ||||||
| hg19:Y:24511180-C-A hg38:Y:22365033-C-A | ** | ||||||
| hg19:Y:24870882-C-A hg38:Y:22724735-C-A | IR1_R | ** | |||||
| hg19:Y:26435257-G-T hg38:Y:24289110-G-T | P1_Y1 | ** | |||||
| hg19:Y:27398535-AG-A hg38:Y:25252388-AG-A | P1_g3 | ** | |||||
| hg19:Y:28500734-C-A hg38:Y:26354587-C-A | ** | ||||||
| hg19:Y:28544355-T-A hg38:Y:26398208-T-A | ** | ||||||
| hg19:Y:28609739-T-C hg38:Y:26463592-T-C | ** | ||||||
| hg38:Y2:3113-C-A | ** | ||||||
| hg38:Y2:16971-G-T | ** | ||||||
| hg19:Y:14264865-GGTGT-G hg38:Y:12144159-GGTGT-G | 9×GT | *** | |||||
| hg19:Y:13446833-T-C hg38:Y:11291157-T-C | *** | ||||||
| hg19:Y:8266802-C-A hg38:Y:8398761-C-A | FT327490 | *** | |||||
| hg19:Y:18392810-A-G hg38:Y:16280930-A-G | FT253741 | P6_Gap | *** | ||||
| hg19:Y:18392814-G-A hg38:Y:16280934-G-A | Z7578 | P6_Gap | 8×TCTA | *** | |||
| hg19:Y:18051014-T-TA hg38:Y:15939134-T-TA | A10537 | 8×A | *** | ||||
| hg19:Y:22069001-CAA-C,CA hg38:Y:19907115-CAA-C,CA | 14×A | *** | |||||
| hg19:Y:15956866-C-CTT hg38:Y:13844986-C-CTT | 15×T | *** | |||||
| hg19:Y:4325846-CTTAT-C hg38:Y:4457805-CTTAT-C | 6×TTAT | *** | |||||
| hg19:Y:6768762-G-GAA hg38:Y:6900721-G-GAA | 17×A | *** | |||||
| hg19:Y:17729886-C-A hg38:Y:15618006-C-A | *** | ||||||
| hg19:Y:2702822-C-A hg38:Y:2834781-C-A | *** | ||||||
| hg19:Y:24361124-C-A hg38:Y:22214977-C-A | *** | ||||||
| hg38:Y:11643707-T-A | DYZ17 | *** | |||||
| hg19:Y:7617852-AT-A hg38:Y:7749811-AT-A | 10×T | *** | |||||
| hg19:Y:22627216-CTT-C hg38:Y:20465330-CTT-C | 12×T | *** | |||||
| hg19:Y:18426482-GA-G,GAA hg38:Y:16314602-GA-G,GAA | P6_Gap | 15×A | *** | ||||
| hg19:Y:2974540-C-A hg38:Y:3106499-C-A | *** | ||||||
| hg19:Y:23293662-C-A hg38:Y:21131776-C-A | *** | ||||||
| hg19:Y:6873167-C-A hg38:Y:7005126-C-A | *** | ||||||
| hg19:Y:18725175-C-A hg38:Y:16613295-C-A | *** | ||||||
| hg19:Y:21139937-C-A hg38:Y:18978051-C-A | *** | ||||||
| hg19:Y:14342337-C-A hg38:Y:12221632-C-A | *** | ||||||
| hg19:Y:17673101-C-A hg38:Y:15561221-C-A | *** | ||||||
| hg19:Y:4770409-G-T hg38:Y:4902368-G-T | *** | ||||||
| hg38:Y:11005474-A-T | *** | ||||||
| hg38:Y:11005464-AT-A | *** | ||||||
| hg19:Y:24406172-G-T hg38:Y:22260025-G-T | *** | ||||||
| hg19:Y:22079514-C-A hg38:Y:19917628-C-A | *** | ||||||
| hg19:Y:58848125-C-A hg38:Y:56742746-G-T | *** | ||||||
| hg19:Y:21480959-C-A hg38:Y:19319073-C-A | *** | ||||||
| hg38:Y:10808605-CCAT-C | *** | ||||||
| hg19:Y:15394201-T-C hg38:Y:13282321-T-C | *** | ||||||
| hg19:Y:14349446-C-A hg38:Y:12228741-C-A | *** | ||||||
| hg19:Y:13446815-C-G hg38:Y:11291139-C-G | *** | ||||||
| hg38:Y:56833655-TCCTATTCCATTCCTC-T,TCC | *** | ||||||
| hg19:Y:16371118-A-ATT hg38:Y:14259238-A-ATT | 15×T | *** | |||||
| hg19:Y:5125968-C-CTT hg38:Y:5257927-C-CTT | 14×T | *** | |||||
| hg19:Y:22647608-T-TA hg38:Y:20485722-T-TA | 8×A | *** | |||||
| hg19:Y:2666746-C-A hg38:Y:2798705-C-A | *** | ||||||
| hg19:Y:2813338-A-AT hg38:Y:2945297-A-AT | *** | ||||||
| hg19:Y:2848622-T-C hg38:Y:2980581-T-C | *** | ||||||
| hg19:Y:3388978-C-A hg38:Y:3520937-C-A | *** | ||||||
| hg19:Y:3726239-C-A hg38:Y:3858198-C-A | *** | ||||||
| hg19:Y:6870754-C-A hg38:Y:7002713-C-A | *** | ||||||
| hg19:Y:7131438-C-A hg38:Y:7263397-C-A | *** | ||||||
| hg19:Y:7330623-C-A hg38:Y:7462582-C-A | *** | ||||||
| hg19:Y:7400850-C-A hg38:Y:7532809-C-A | *** | ||||||
| hg19:Y:7628494-C-A hg38:Y:7760453-C-A | *** | ||||||
| hg19:Y:7926096-C-A hg38:Y:8058055-C-A | *** | ||||||
| hg19:Y:8350360-G-T hg38:Y:8482319-G-T | *** | ||||||
| hg19:Y:8647698-C-A hg38:Y:8779657-C-A | *** | ||||||
| hg19:Y:8788135-CA-C hg38:Y:8920094-CA-C | *** | ||||||
| hg19:Y:8819905-T-C hg38:Y:8951864-T-C | *** | ||||||
| hg19:Y:9111452-G-T hg38:Y:9273843-G-T | *** | ||||||
| hg19:Y:9138933-C-A hg38:Y:9301324-C-A | *** | ||||||
| hg19:Y:9458205-C-A hg38:Y:9620596-C-A | *** | ||||||
| hg19:Y:9481213-C-A hg38:Y:9643604-C-A | *** | ||||||
| hg19:Y:9574419-C-A hg38:Y:9736810-C-A | IR3_Prx | *** | |||||
| hg19:Y:9644010-C-A hg38:Y:9806401-C-A | IR3_Prx | *** | |||||
| hg38:Y:10866084-CCCAAT-C,CTCAAC | *** | ||||||
| hg38:Y:10953801-G-A | *** | ||||||
| hg38:Y:10965568-C-G | *** | ||||||
| hg19:Y:13212673-C-T hg38:Y:11056997-C-T | *** | ||||||
| hg19:Y:13721009-G-T hg38:Y:11565333-G-T | DYZ17 | *** | |||||
| hg19:Y:14329441-C-A hg38:Y:12208735-C-A | *** | ||||||
| hg19:Y:14343646-C-A hg38:Y:12222941-C-A | *** | ||||||
| hg19:Y:14639432-C-A hg38:Y:12527501-C-A | *** | ||||||
| hg19:Y:14700321-A-G hg38:Y:12588387-A-G | *** | ||||||
| hg19:Y:14701783-C-A hg38:Y:12589849-C-A | *** | ||||||
| hg19:Y:14807520-C-A hg38:Y:12695591-C-A | *** | ||||||
| hg19:Y:14890349-C-A hg38:Y:12778415-C-A | *** | ||||||
| hg19:Y:15035213-GA-G hg38:Y:12923301-GA-G | 10×A | *** | |||||
| hg19:Y:15156399-C-A hg38:Y:13044486-C-A | *** | ||||||
| hg19:Y:15241705-C-A hg38:Y:13129791-C-A | *** | ||||||
| hg19:Y:15249654-G-A hg38:Y:13137740-G-A | *** | ||||||
| hg19:Y:15415987-C-T hg38:Y:13304107-C-T | *** | ||||||
| hg19:Y:15469784-C-A hg38:Y:13357904-C-A | *** | ||||||
| hg19:Y:15626313-T-G hg38:Y:13514433-T-G | FT296552 | *** | |||||
| hg19:Y:15642015-C-A hg38:Y:13530135-C-A | *** | ||||||
| hg19:Y:15680373-T-C hg38:Y:13568493-T-C | *** | ||||||
| hg19:Y:15934972-C-T hg38:Y:13823092-C-T | *** | ||||||
| hg19:Y:15978565-G-GA hg38:Y:13866685-G-GA | 9×A | *** | |||||
| hg19:Y:16534586-C-A hg38:Y:14422706-C-A | *** | ||||||
| hg19:Y:16852747-C-A hg38:Y:14740867-C-A | *** | ||||||
| hg19:Y:16910428-C-A hg38:Y:14798548-C-A | *** | ||||||
| hg19:Y:16984576-C-A hg38:Y:14872696-C-A | *** | ||||||
| hg19:Y:17118336-C-A hg38:Y:15006456-C-A | *** | ||||||
| hg19:Y:17386588-A-C hg38:Y:15274708-A-C | *** | ||||||
| hg19:Y:17408514-C-A hg38:Y:15296634-C-A | *** | ||||||
| hg19:Y:17652202-C-A hg38:Y:15540322-C-A | *** | ||||||
| hg19:Y:17889280-C-A hg38:Y:15777400-C-A | *** | ||||||
| hg19:Y:17904150-C-A hg38:Y:15792270-C-A | *** | ||||||
| hg19:Y:18235359-C-A hg38:Y:16123479-C-A | *** | ||||||
| hg19:Y:18886152-C-A hg38:Y:16774272-C-A | *** | ||||||
| hg19:Y:19045687-CTT-C,CTTT hg38:Y:16933807-CTT-C,CTTT | 17×T | *** | |||||
| hg19:Y:19137328-C-A hg38:Y:17025448-C-A | *** | ||||||
| hg19:Y:19308347-A-G hg38:Y:17196467-A-G | *** | ||||||
| hg19:Y:19338691-A-G hg38:Y:17226811-A-G | *** | ||||||
| hg19:Y:19401497-C-A hg38:Y:17289617-C-A | *** | ||||||
| hg19:Y:21066002-C-A hg38:Y:18904116-C-A | *** | ||||||
| hg19:Y:21180089-C-A hg38:Y:19018203-C-A | *** | ||||||
| hg19:Y:21299064-C-A hg38:Y:19137178-C-A | *** | ||||||
| hg19:Y:21461020-C-A hg38:Y:19299134-C-A | *** | ||||||
| hg19:Y:21486566-C-A hg38:Y:19324680-C-A | *** | ||||||
| hg19:Y:21841045-C-A hg38:Y:19679159-C-A | *** | ||||||
| hg19:Y:22065949-T-A hg38:Y:19904063-T-A | *** | ||||||
| hg19:Y:22175273-C-A hg38:Y:20013387-C-A | *** | ||||||
| hg19:Y:22181231-C-A hg38:Y:20019345-C-A | *** | ||||||
| hg19:Y:22591867-C-A hg38:Y:20429981-C-A | *** | ||||||
| hg19:Y:22758572-C-A hg38:Y:20596686-C-A | *** | ||||||
| hg19:Y:22772446-A-G hg38:Y:20610560-A-G | *** | ||||||
| hg19:Y:22792752-C-A hg38:Y:20630866-C-A | *** | ||||||
| hg19:Y:22869107-C-A hg38:Y:20707221-C-A | *** | ||||||
| hg19:Y:23022777-C-A hg38:Y:20860891-C-A | *** | ||||||
| hg19:Y:23540039-C-A hg38:Y:21378153-C-A | *** | ||||||
| hg19:Y:23575425-C-A hg38:Y:21413539-C-A | *** | ||||||
| hg19:Y:23595750-C-A hg38:Y:21433864-C-A | *** | ||||||
| hg19:Y:23854715-C-A hg38:Y:21692829-C-A | *** | ||||||
| hg19:Y:23855551-C-A hg38:Y:21693665-C-A | *** | ||||||
| hg19:Y:23953102-C-A hg38:Y:21806955-C-A | *** | ||||||
| hg19:Y:24480109-C-A hg38:Y:22333962-C-A | *** | ||||||
| hg19:Y:28480055-C-A hg38:Y:26333908-C-A | *** | ||||||
| hg19:Y:28499602-C-A hg38:Y:26353455-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 639321 | 8383566 | 6912581 | 6873220 |
| Used in age calculations | 8383566 | 6912581 | 6873220 |
| Counts of SNPs | 5 | 5 |
Big Tree Main Page