O'Cunha
BigY2: 235376MDKA Birth:
Portugal > MadeiraTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 235376 |
|---|---|---|---|---|---|---|---|
| hg19:Y:4780161-C-CA hg38:Y:4912120-C-CA | 10×A | A* | |||||
| hg19:Y:19727301-C-T hg38:Y:17615421-C-T | P5_Prx | A* | |||||
| hg19:Y:19925590-G-A hg38:Y:17813710-G-A | P5_Prx | A* | |||||
| hg19:Y:20051738-G-T hg38:Y:17939858-G-T | P5_Prx | A* | |||||
| hg19:Y:22306224-G-A hg38:Y:20144338-G-A | DYZ19 | A* | |||||
| hg19:Y:22313123-G-T hg38:Y:20151237-G-T | DYZ19 | A* | |||||
| hg19:Y:22450607-C-G hg38:Y:20288721-C-G | DYZ19 | A* | |||||
| hg19:Y:26155646-G-A hg38:Y:24009499-G-A | P1_Y1 | A* | |||||
| hg19:Y:26201918-T-G hg38:Y:24055771-T-G | P1_Y1 | A* | |||||
| hg19:Y:21816649-AT-A hg38:Y:19654763-AT-A | 9×T | + | |||||
| hg19:Y:23557784-C-T hg38:Y:21395898-C-T | BY36097 | Y80077 | Y | Y | + | ||
| hg19:Y:17685650-G-A hg38:Y:15573770-G-A | BY116658 | Y | Y | + | |||
| hg19:Y:19068737-G-A hg38:Y:16956857-G-A | Z2397 PF5197 | Y | Y | + | |||
| hg19:Y:3162624-G-A hg38:Y:3294583-G-A | FT316278 | + | |||||
| hg19:Y:7742142-C-G hg38:Y:7874101-C-G | Y | Y | + | ||||
| hg19:Y:8168360-T-A hg38:Y:8300319-T-A | Y | Y | + | ||||
| hg19:Y:8358492-T-C hg38:Y:8490451-T-C | Y | Y | + | ||||
| hg19:Y:8428970-G-T hg38:Y:8560929-G-T | Y | Y | + | ||||
| hg19:Y:9648323-T-A hg38:Y:9810714-T-A | IR3_Prx | + | |||||
| hg19:Y:13695791-T-C hg38:Y:11540115-T-C | BY88928 | DYZ17 | + | ||||
| hg19:Y:13826681-A-G hg38:Y:11705975-A-G | BY90735 | DYZ17 | + | ||||
| hg19:Y:14090382-C-G hg38:Y:11969676-C-G | Y | Y | + | ||||
| hg19:Y:14787401-A-T hg38:Y:12675471-A-T | Y | Y | + | ||||
| hg19:Y:15612562-G-A hg38:Y:13500682-G-A | Y | Y | + | ||||
| hg19:Y:15937758-T-G hg38:Y:13825878-T-G | Y | Y | + | ||||
| hg19:Y:16346962-T-G hg38:Y:14235082-T-G | Y | Y | + | ||||
| hg19:Y:16401185-C-A hg38:Y:14289305-C-A | Y | Y | + | ||||
| hg19:Y:16526033-A-G hg38:Y:14414153-A-G | Y | Y | + | ||||
| hg19:Y:16627403-T-C hg38:Y:14515523-T-C | Y | Y | + | ||||
| hg19:Y:18137753-T-C hg38:Y:16025873-T-C | Y | Y | + | ||||
| hg19:Y:18689241-A-C hg38:Y:16577361-A-C | Y | Y | + | ||||
| hg19:Y:19127985-G-T hg38:Y:17016105-G-T | Y | Y | + | ||||
| hg19:Y:19160564-A-G hg38:Y:17048684-A-G | Y | Y | + | ||||
| hg19:Y:19164771-A-C hg38:Y:17052891-A-C | Y | + | |||||
| hg19:Y:21625513-C-A hg38:Y:19463627-C-A | BY134299 | Y | Y | + | |||
| hg19:Y:22461844-A-G hg38:Y:20299958-A-G | BY52835 | DYZ19 | + | ||||
| hg19:Y:22484559-T-C hg38:Y:20322673-T-C | BY224652 | DYZ19 | + | ||||
| hg19:Y:23045273-C-G hg38:Y:20883387-C-G | Y | Y | + | ||||
| hg19:Y:24454805-C-T hg38:Y:22308658-C-T | Y | + | |||||
| hg38:Y2:12377-G-C | + | ||||||
| hg19:Y:22429259-C-G hg38:Y:20267373-C-G | DYZ19 | * | |||||
| hg19:Y:22299207-G-T hg38:Y:20137321-G-T | DYZ19 | * | |||||
| hg38:Y:10631699-C-CTTTCCATTCCATTCCATACT | * | ||||||
| hg19:Y:13480543-C-A hg38:Y:11324867-C-A | ** | ||||||
| hg19:Y:18036535-A-G hg38:Y:15924655-A-G | ** | ||||||
| hg19:Y:4683340-C-A hg38:Y:4815299-C-A | ** | ||||||
| hg19:Y:14739804-G-T hg38:Y:12627872-G-T | 13×T | ** | |||||
| hg19:Y:14835342-G-T hg38:Y:12723409-G-T | ** | ||||||
| hg19:Y:9975072-C-A hg38:Y:10137463-C-A | ** | ||||||
| hg19:Y:9764132-A-T hg38:Y:9926523-A-T | ** | ||||||
| hg19:Y:23464719-C-A hg38:Y:21302833-C-A | ** | ||||||
| hg38:Y:10999176-C-A | ** | ||||||
| hg19:Y:23034451-C-T hg38:Y:20872565-C-T | ** | ||||||
| hg19:Y:9979009-C-A hg38:Y:10141400-C-A | ** | ||||||
| hg38:Y:10921208-C-T | ** | ||||||
| hg19:Y:19967086-C-A hg38:Y:17855206-C-A | P5_Prx | ** | |||||
| hg38:Y:56828259-C-A | ** | ||||||
| hg19:Y:23345805-C-A hg38:Y:21183919-C-A | ** | ||||||
| hg19:Y:13891454-C-A hg38:Y:11770748-C-A | ** | ||||||
| hg19:Y:23034457-A-AT hg38:Y:20872571-A-AT | ** | ||||||
| hg19:Y:14239324-C-A hg38:Y:12118618-C-A | ** | ||||||
| hg19:Y:16540968-C-A hg38:Y:14429088-C-A | ** | ||||||
| hg19:Y:6403706-T-C hg38:Y:6535665-T-C | ** | ||||||
| hg19:Y:15655084-C-A hg38:Y:13543204-C-A | ** | ||||||
| hg38:Y:10748038-T-G | ** | ||||||
| hg19:Y:18189482-C-A hg38:Y:16077602-C-A | ** | ||||||
| hg38:Y:10889348-C-A | ** | ||||||
| hg19:Y:13576092-C-A hg38:Y:11420416-C-A | ** | ||||||
| hg19:Y:21949141-C-A hg38:Y:19787255-C-A | ** | ||||||
| hg19:Y:6090431-C-A hg38:Y:6222390-C-A | ** | ||||||
| hg19:Y:16246059-G-T hg38:Y:14134179-G-T | ** | ||||||
| hg19:Y:15221765-C-A hg38:Y:13109851-C-A | ** | ||||||
| hg19:Y:13329218-AG-A hg38:Y:11173542-AG-A | ** | ||||||
| hg38:Y:10912947-A-G | ** | ||||||
| hg38:Y:10754484-C-A | ** | ||||||
| hg19:Y:14432108-C-A hg38:Y:12311381-C-A | ** | ||||||
| hg19:Y:28742550-C-A hg38:Y:26596403-C-A | ** | ||||||
| hg19:Y:5524801-A-G hg38:Y:5656760-A-G | ** | ||||||
| hg19:Y:6830557-C-A hg38:Y:6962516-C-A | ** | ||||||
| hg38:Y:10964854-C-T | ** | ||||||
| hg19:Y:7098011-C-A hg38:Y:7229970-C-A | ** | ||||||
| hg19:Y:14391792-C-A hg38:Y:12271088-C-A | ** | ||||||
| hg19:Y:23034391-C-T hg38:Y:20872505-C-T | ** | ||||||
| hg19:Y:15769443-C-CA hg38:Y:13657563-C-CA | ** | ||||||
| hg19:Y:16091253-C-A hg38:Y:13979373-C-A | ** | ||||||
| hg19:Y:15921229-C-A hg38:Y:13809349-C-A | ** | ||||||
| hg19:Y:4925408-G-T hg38:Y:5057367-G-T | ** | ||||||
| hg19:Y:2767941-G-T hg38:Y:2899900-G-T | ** | ||||||
| hg19:Y:14395645-C-A hg38:Y:12274941-C-A | ** | ||||||
| hg19:Y:3340703-C-T hg38:Y:3472662-C-T | ** | ||||||
| hg19:Y:16993354-C-A hg38:Y:14881474-C-A | ** | ||||||
| hg19:Y:13231684-C-A hg38:Y:11076008-C-A | ** | ||||||
| hg19:Y:8724115-C-A hg38:Y:8856074-C-A | ** | ||||||
| hg38:Y:10660525-C-A | ** | ||||||
| hg19:Y:15238983-A-C hg38:Y:13127069-A-C | ** | ||||||
| hg19:Y:20995543-C-CTTTCT hg38:Y:18833657-C-CTTTCT | P4_Dst | ** | |||||
| hg19:Y:22809955-C-A hg38:Y:20648069-C-A | ** | ||||||
| hg19:Y:17181626-C-A hg38:Y:15069746-C-A | ** | ||||||
| hg38:Y:10653748-C-A | ** | ||||||
| hg19:Y:6357873-T-G hg38:Y:6489832-T-G | ** | ||||||
| hg19:Y:5841942-C-A hg38:Y:5973901-C-A | ** | ||||||
| hg19:Y:28483770-C-A hg38:Y:26337623-C-A | ** | ||||||
| hg19:Y:7333101-C-A hg38:Y:7465060-C-A | ** | ||||||
| hg19:Y:13326237-T-C hg38:Y:11170561-T-C | ** | ||||||
| hg19:Y:17567471-C-A hg38:Y:15455591-C-A | ** | ||||||
| hg19:Y:15943095-C-A hg38:Y:13831215-C-A | ** | ||||||
| hg19:Y:17313423-C-A hg38:Y:15201543-C-A | ** | ||||||
| hg19:Y:14180854-C-A hg38:Y:12060148-C-A | ** | ||||||
| hg38:Y:11004773-GCATTC-G | ** | ||||||
| hg38:Y:10912943-G-C | ** | ||||||
| hg38:Y:10959215-G-A | ** | ||||||
| hg19:Y:15276609-C-A hg38:Y:13164698-C-A | ** | ||||||
| hg19:Y:16926847-C-A hg38:Y:14814967-C-A | ** | ||||||
| hg19:Y:7248064-C-A hg38:Y:7380023-C-A | ** | ||||||
| hg19:Y:19189466-G-TTT hg38:Y:17077586-G-TTT | ** | ||||||
| hg19:Y:20082757-T-TC hg38:Y:17970877-T-TC | P5_Dst | ** | |||||
| hg19:Y:18577254-C-A hg38:Y:16465374-C-A | ** | ||||||
| hg19:Y:4958301-G-T hg38:Y:5090260-G-T | ** | ||||||
| hg19:Y:21148446-C-A hg38:Y:18986560-C-A | ** | ||||||
| hg19:Y:13273042-C-A hg38:Y:11117366-C-A | ** | ||||||
| hg38:Y:11645509-A-G | DYZ17 | ** | |||||
| hg19:Y:8389732-C-A hg38:Y:8521691-C-A | ** | ||||||
| hg19:Y:4586388-C-T hg38:Y:4718347-C-T | 11×T | ** | |||||
| hg19:Y:4447329-C-A hg38:Y:4579288-C-A | ** | ||||||
| hg19:Y:4387943-C-A hg38:Y:4519902-C-A | ** | ||||||
| hg19:Y:23004603-C-A hg38:Y:20842717-C-A | ** | ||||||
| hg38:Y:10748025-C-G | ** | ||||||
| hg38:Y:10995944-C-A | ** | ||||||
| hg19:Y:22529600-C-A hg38:Y:20367714-C-A | ** | ||||||
| hg19:Y:14486025-C-A hg38:Y:12365294-C-A | ** | ||||||
| hg19:Y:16309301-T-G hg38:Y:14197421-T-G | ** | ||||||
| hg19:Y:6881467-A-G hg38:Y:7013426-A-G | ** | ||||||
| hg38:Y:10803380-C-A | ** | ||||||
| hg38:Y:10833437-G-T | ** | ||||||
| hg19:Y:18189539-C-A hg38:Y:16077659-C-A | ** | ||||||
| hg19:Y:3274163-C-G hg38:Y:3406122-C-G | ** | ||||||
| hg38:Y:10964824-C-A | ** | ||||||
| hg19:Y:6357935-G-T hg38:Y:6489894-G-T | ** | ||||||
| hg38:Y:10912077-C-A | ** | ||||||
| hg19:Y:7828997-C-A hg38:Y:7960956-C-A | ** | ||||||
| hg19:Y:22703592-T-C hg38:Y:20541706-T-C | ** | ||||||
| hg38:Y:11005044-C-A | FT144556 | ** | |||||
| hg19:Y:3436313-C-A hg38:Y:3568272-C-A | ** | ||||||
| hg19:Y:10049676-A-T hg38:Y:10212067-A-T | ** | ||||||
| hg19:Y:7432352-C-A hg38:Y:7564311-C-A | ** | ||||||
| hg38:Y:10942477-C-A | ** | ||||||
| hg19:Y:15744043-C-A hg38:Y:13632163-C-A | ** | ||||||
| hg19:Y:13601071-T-A hg38:Y:11445395-T-A | ** | ||||||
| hg19:Y:14458099-C-A hg38:Y:12337372-C-A | ** | ||||||
| hg38:Y:11000039-C-A | FT200003 | ** | |||||
| hg38:Y:11020295-C-T | ** | ||||||
| hg19:Y:2856517-C-A hg38:Y:2988476-C-A | ** | ||||||
| hg19:Y:18793706-C-A hg38:Y:16681826-C-A | ** | ||||||
| hg19:Y:7142783-C-A hg38:Y:7274742-C-A | ** | ||||||
| hg19:Y:27952091-GTATATATATATATATATATA-G hg38:Y:25805944-GTATATATATATATATATATA-G | P1_Y2 | 19×TA | ** | ||||
| hg19:Y:16645771-C-A hg38:Y:14533891-C-A | ** | ||||||
| hg19:Y:18930745-C-A hg38:Y:16818865-C-A | ** | ||||||
| hg19:Y:13487012-C-A hg38:Y:11331336-C-A | ** | ||||||
| hg38:Y:10760626-C-A | ** | ||||||
| hg19:Y:19547640-A-G hg38:Y:17435760-A-G | ** | ||||||
| hg19:Y:20902305-A-AG hg38:Y:18740419-A-AG | P4_Dst | ** | |||||
| hg38:Y:10845698-T-TTCGTG | ** | ||||||
| hg38:Y:10845713-T-G | ** | ||||||
| hg19:Y:15916376-C-A hg38:Y:13804496-C-A | ** | ||||||
| hg38:Y:10748021-C-G | ** | ||||||
| hg19:Y:6644965-C-A hg38:Y:6776924-C-A | ** | ||||||
| hg19:Y:8776604-T-C hg38:Y:8908563-T-C | ** | ||||||
| hg38:Y:10757399-C-T | ** | ||||||
| hg19:Y:2806250-C-T hg38:Y:2938209-C-T | ** | ||||||
| hg19:Y:21624540-C-A hg38:Y:19462654-C-A | ** | ||||||
| hg19:Y:9926892-C-A hg38:Y:10089283-C-A | ** | ||||||
| hg19:Y:22882112-C-A hg38:Y:20720226-C-A | ** | ||||||
| hg19:Y:22443480-G-C hg38:Y:20281594-G-C | BY219254 | DYZ19 | ** | ||||
| hg38:Y:10945579-G-T | ** | ||||||
| hg19:Y:14358382-C-A hg38:Y:12237677-C-A | ** | ||||||
| hg19:Y:16059485-G-T hg38:Y:13947605-G-T | ** | ||||||
| hg19:Y:21677573-T-C hg38:Y:19515687-T-C | ** | ||||||
| hg38:Y:10951288-C-A | ** | ||||||
| hg38:Y:10766741-C-A | ** | ||||||
| hg38:Y:11649347-C-A | DYZ17 | ** | |||||
| hg19:Y:6730311-C-A hg38:Y:6862270-C-A | ** | ||||||
| hg19:Y:16636051-C-A hg38:Y:14524171-C-A | ** | ||||||
| hg38:Y:10861942-T-C | ** | ||||||
| hg19:Y:5612656-C-A hg38:Y:5744615-C-A | ** | ||||||
| hg19:Y:2708322-GC-G hg38:Y:2840281-GC-G | ** | ||||||
| hg19:Y:2729737-A-T hg38:Y:2861696-A-T | ** | ||||||
| hg19:Y:2772509-TC-T hg38:Y:2904468-TC-T | ** | ||||||
| hg19:Y:2775212-C-A hg38:Y:2907171-C-A | ** | ||||||
| hg19:Y:2778592-C-T hg38:Y:2910551-C-T | ** | ||||||
| hg19:Y:2845224-A-G hg38:Y:2977183-A-G | ** | ||||||
| hg19:Y:2852683-A-T hg38:Y:2984642-A-T | ** | ||||||
| hg19:Y:2885590-C-A hg38:Y:3017549-C-A | ** | ||||||
| hg19:Y:2888523-ACATAAAACCAGCTGCTTTTATAAAAGAAGATTGCC-A hg38:Y:3020482-ACATAAAACCAGCTGCTTTTATAAAAGAAGATTGCC-A | ** | ||||||
| hg19:Y:2960618-G-T hg38:Y:3092577-G-T | ** | ||||||
| hg19:Y:2976634-G-T hg38:Y:3108593-G-T | ** | ||||||
| hg19:Y:3108436-C-A hg38:Y:3240395-C-A | ** | ||||||
| hg19:Y:3177127-G-A hg38:Y:3309086-G-A | ** | ||||||
| hg19:Y:3178181-C-A hg38:Y:3310140-C-A | ** | ||||||
| hg19:Y:3271401-C-A hg38:Y:3403360-C-A | ** | ||||||
| hg19:Y:3320502-G-T hg38:Y:3452461-G-T | ** | ||||||
| hg19:Y:3329448-C-A hg38:Y:3461407-C-A | ** | ||||||
| hg19:Y:3331018-C-A hg38:Y:3462977-C-A | ** | ||||||
| hg19:Y:3374656-G-C hg38:Y:3506615-G-C | ** | ||||||
| hg19:Y:3410549-ATTAT-A hg38:Y:3542508-ATTAT-A | 4×TTAT | ** | |||||
| hg19:Y:3538341-C-A hg38:Y:3670300-C-A | ** | ||||||
| hg19:Y:3612380-G-T hg38:Y:3744339-G-T | ** | ||||||
| hg19:Y:3707903-G-T hg38:Y:3839862-G-T | ** | ||||||
| hg19:Y:3814875-G-T hg38:Y:3946834-G-T | ** | ||||||
| hg19:Y:3829547-G-T hg38:Y:3961506-G-T | ** | ||||||
| hg19:Y:3865294-T-G hg38:Y:3997253-T-G | ** | ||||||
| hg19:Y:4107881-T-C hg38:Y:4239840-T-C | ** | ||||||
| hg19:Y:4160822-C-A hg38:Y:4292781-C-A | ** | ||||||
| hg19:Y:4270425-C-A hg38:Y:4402384-C-A | ** | ||||||
| hg19:Y:4374844-C-A hg38:Y:4506803-C-A | ** | ||||||
| hg19:Y:4412066-C-A hg38:Y:4544025-C-A | ** | ||||||
| hg19:Y:4417482-T-C hg38:Y:4549441-T-C | FGC31564 | ** | |||||
| hg19:Y:4480653-C-A hg38:Y:4612612-C-A | ** | ||||||
| hg19:Y:4586384-G-T hg38:Y:4718343-G-T | ** | ||||||
| hg19:Y:4586406-C-T hg38:Y:4718365-C-T | ** | ||||||
| hg19:Y:4628809-G-T hg38:Y:4760768-G-T | ** | ||||||
| hg19:Y:4723003-G-T hg38:Y:4854962-G-T | ** | ||||||
| hg19:Y:4853388-TA-T hg38:Y:4985347-TA-T | ** | ||||||
| hg19:Y:4888580-C-T hg38:Y:5020539-C-T | ** | ||||||
| hg19:Y:4999619-C-A hg38:Y:5131578-C-A | ** | ||||||
| hg19:Y:4999650-C-A hg38:Y:5131609-C-A | ** | ||||||
| hg19:Y:5091285-G-T hg38:Y:5223244-G-T | ** | ||||||
| hg19:Y:5141436-C-A hg38:Y:5273395-C-A | ** | ||||||
| hg19:Y:5214029-A-G hg38:Y:5345988-A-G | ** | ||||||
| hg19:Y:5235396-G-T hg38:Y:5367355-G-T | ** | ||||||
| hg19:Y:5277011-C-A hg38:Y:5408970-C-A | ** | ||||||
| hg19:Y:5310214-C-A hg38:Y:5442173-C-A | ** | ||||||
| hg19:Y:5340343-A-G hg38:Y:5472302-A-G | ** | ||||||
| hg19:Y:5428575-G-A hg38:Y:5560534-G-A | ** | ||||||
| hg19:Y:5446256-T-A hg38:Y:5578215-T-A | ** | ||||||
| hg19:Y:5472357-C-A hg38:Y:5604316-C-A | ** | ||||||
| hg19:Y:5494444-C-A hg38:Y:5626403-C-A | ** | ||||||
| hg19:Y:5591468-C-A hg38:Y:5723427-C-A | ** | ||||||
| hg19:Y:5755021-C-A hg38:Y:5886980-C-A | ** | ||||||
| hg19:Y:5781990-T-A hg38:Y:5913949-T-A | ** | ||||||
| hg19:Y:5806399-G-A hg38:Y:5938358-G-A | ** | ||||||
| hg19:Y:5870294-C-A hg38:Y:6002253-C-A | ** | ||||||
| hg19:Y:5894370-C-A hg38:Y:6026329-C-A | ** | ||||||
| hg19:Y:5894413-C-A hg38:Y:6026372-C-A | ** | ||||||
| hg19:Y:5913772-G-T hg38:Y:6045731-G-T | ** | ||||||
| hg19:Y:5966246-C-A hg38:Y:6098205-C-A | ** | ||||||
| hg19:Y:5969060-C-A hg38:Y:6101019-C-A | ** | ||||||
| hg19:Y:5976424-T-C hg38:Y:6108383-T-C | ** | ||||||
| hg19:Y:6010206-C-A hg38:Y:6142165-C-A | ** | ||||||
| hg19:Y:6031294-GA-G hg38:Y:6163253-GA-G | ** | ||||||
| hg19:Y:6031671-C-A hg38:Y:6163630-C-A | ** | ||||||
| hg19:Y:6034834-C-A hg38:Y:6166793-C-A | ** | ||||||
| hg19:Y:6068950-C-A hg38:Y:6200909-C-A | ** | ||||||
| hg19:Y:6357966-G-C hg38:Y:6489925-G-C | FT364813 | ** | |||||
| hg19:Y:6403204-G-T hg38:Y:6535163-G-T | ** | ||||||
| hg19:Y:6429541-C-A hg38:Y:6561500-C-A | ** | ||||||
| hg19:Y:6448804-C-A hg38:Y:6580763-C-A | ** | ||||||
| hg19:Y:6461832-T-A hg38:Y:6593791-T-A | ** | ||||||
| hg19:Y:6471790-G-T hg38:Y:6603749-G-T | ** | ||||||
| hg19:Y:6476251-C-T hg38:Y:6608210-C-T | ** | ||||||
| hg19:Y:6476261-T-C hg38:Y:6608220-T-C | ** | ||||||
| hg19:Y:6479589-G-A hg38:Y:6611548-G-A | FT326692 | ** | |||||
| hg19:Y:6516305-C-A hg38:Y:6648264-C-A | ** | ||||||
| hg19:Y:6532933-G-A hg38:Y:6664892-G-A | ** | ||||||
| hg19:Y:6540636-A-G hg38:Y:6672595-A-G | ** | ||||||
| hg19:Y:6582360-G-A hg38:Y:6714319-G-A | ** | ||||||
| hg19:Y:6611301-C-A hg38:Y:6743260-C-A | ** | ||||||
| hg19:Y:6682241-C-T hg38:Y:6814200-C-T | ** | ||||||
| hg19:Y:6730659-C-G hg38:Y:6862618-C-G | ** | ||||||
| hg19:Y:6756071-C-A hg38:Y:6888030-C-A | ** | ||||||
| hg19:Y:6757652-T-C hg38:Y:6889611-T-C | ** | ||||||
| hg19:Y:6786609-G-GT hg38:Y:6918568-G-GT | ** | ||||||
| hg19:Y:6826999-C-T hg38:Y:6958958-C-T | FT36372 | ** | |||||
| hg19:Y:6874729-G-C hg38:Y:7006688-G-C | ** | ||||||
| hg19:Y:6882452-T-A hg38:Y:7014411-T-A | ** | ||||||
| hg19:Y:6911290-C-T hg38:Y:7043249-C-T | ** | ||||||
| hg19:Y:6978391-C-A hg38:Y:7110350-C-A | ** | ||||||
| hg19:Y:6992528-T-G hg38:Y:7124487-T-G | ** | ||||||
| hg19:Y:7012379-G-T hg38:Y:7144338-G-T | ** | ||||||
| hg19:Y:7017053-C-CA hg38:Y:7149012-C-CA | ** | ||||||
| hg19:Y:7040909-C-A hg38:Y:7172868-C-A | ** | ||||||
| hg19:Y:7091172-A-G hg38:Y:7223131-A-G | ** | ||||||
| hg19:Y:7132523-G-T hg38:Y:7264482-G-T | ** | ||||||
| hg19:Y:7180159-C-A hg38:Y:7312118-C-A | ** | ||||||
| hg19:Y:7185039-A-G hg38:Y:7316998-A-G | ** | ||||||
| hg19:Y:7294521-G-T hg38:Y:7426480-G-T | ** | ||||||
| hg19:Y:7359780-T-TAAA hg38:Y:7491739-T-TAAA | ** | ||||||
| hg19:Y:7364019-A-G hg38:Y:7495978-A-G | ** | ||||||
| hg19:Y:7372610-G-T hg38:Y:7504569-G-T | ** | ||||||
| hg19:Y:7664234-A-C hg38:Y:7796193-A-C | ** | ||||||
| hg19:Y:7917160-T-C hg38:Y:8049119-T-C | ** | ||||||
| hg19:Y:8085665-C-A hg38:Y:8217624-C-A | ** | ||||||
| hg19:Y:8694205-TG-T hg38:Y:8826164-TG-T | ** | ||||||
| hg19:Y:8699619-A-G hg38:Y:8831578-A-G | ** | ||||||
| hg19:Y:9047440-G-A hg38:Y:9209831-G-A | FT133659 | ** | |||||
| hg19:Y:9063374-A-G hg38:Y:9225765-A-G | ** | ||||||
| hg19:Y:9075266-C-A hg38:Y:9237657-C-A | ** | ||||||
| hg19:Y:9075939-G-A hg38:Y:9238330-G-A | ** | ||||||
| hg19:Y:9437071-C-A hg38:Y:9599462-C-A | ** | ||||||
| hg19:Y:9441472-C-A hg38:Y:9603863-C-A | ** | ||||||
| hg19:Y:9501345-C-T hg38:Y:9663736-C-T | ** | ||||||
| hg19:Y:9519198-T-C hg38:Y:9681589-T-C | ** | ||||||
| hg19:Y:9666606-T-C hg38:Y:9828997-T-C | IR3_Prx | ** | |||||
| hg19:Y:9873724-G-T hg38:Y:10036115-G-T | ** | ||||||
| hg19:Y:9937681-C-G hg38:Y:10100072-C-G | ** | ||||||
| hg19:Y:9939920-C-A hg38:Y:10102311-C-A | ** | ||||||
| hg19:Y:9977443-C-G hg38:Y:10139834-C-G | ** | ||||||
| hg19:Y:10006050-C-A hg38:Y:10168441-C-A | ** | ||||||
| hg19:Y:10018099-C-T hg38:Y:10180490-C-T | ** | ||||||
| hg19:Y:10032599-T-C hg38:Y:10194990-T-C | ** | ||||||
| hg19:Y:10034302-C-T hg38:Y:10196693-C-T | ** | ||||||
| hg19:Y:10049632-T-A hg38:Y:10212023-T-A | ** | ||||||
| hg19:Y:10049667-C-A hg38:Y:10212058-C-A | ** | ||||||
| hg38:Y:10657092-T-A | ** | ||||||
| hg38:Y:10667388-G-A | ** | ||||||
| hg38:Y:10775544-C-A | ** | ||||||
| hg38:Y:10780904-C-T | ** | ||||||
| hg38:Y:10782865-C-A | ** | ||||||
| hg38:Y:10788872-C-A | ** | ||||||
| hg38:Y:10806558-C-T | ** | ||||||
| hg38:Y:10811695-C-A | ** | ||||||
| hg38:Y:10811872-A-G | ** | ||||||
| hg38:Y:10828873-C-A | ** | ||||||
| hg38:Y:10830311-G-T | ** | ||||||
| hg38:Y:10830343-C-A | ** | ||||||
| hg38:Y:10835620-T-C | ** | ||||||
| hg38:Y:10841597-C-A | ** | ||||||
| hg38:Y:10845213-C-T | ** | ||||||
| hg38:Y:10845674-T-TCGAGA | ** | ||||||
| hg38:Y:10847723-C-A | ** | ||||||
| hg38:Y:10848042-C-A | ** | ||||||
| hg38:Y:10861922-A-C | ** | ||||||
| hg38:Y:10861937-T-C | FT434471 | ** | |||||
| hg38:Y:10861938-T-C | ** | ||||||
| hg38:Y:10861939-A-C | ** | ||||||
| hg38:Y:10861943-T-C | ** | ||||||
| hg38:Y:10861947-T-C | ** | ||||||
| hg38:Y:10861955-T-C | ** | ||||||
| hg38:Y:10861957-CTAAAT-C | ** | ||||||
| hg38:Y:10861967-T-C | ** | ||||||
| hg38:Y:10861972-T-G | ** | ||||||
| hg38:Y:10872009-C-A | ** | ||||||
| hg38:Y:10887909-C-A | ** | ||||||
| hg38:Y:10921167-A-G | ** | ||||||
| hg38:Y:10921173-T-A | ** | ||||||
| hg38:Y:10921210-C-T | FT436617 | ** | |||||
| hg38:Y:10942038-A-G | FT437532 | ** | |||||
| hg38:Y:10945640-T-C | ** | ||||||
| hg38:Y:10947985-C-A | ** | ||||||
| hg38:Y:10961180-C-G | ** | ||||||
| hg38:Y:10973740-G-T | ** | ||||||
| hg38:Y:10978531-A-G | ** | ||||||
| hg38:Y:10999613-C-A | ** | ||||||
| hg38:Y:11000023-C-CTATTACTTT | ** | ||||||
| hg38:Y:11000026-TTCCA-T | ** | ||||||
| hg38:Y:11005035-A-G | FT393359 | ** | |||||
| hg38:Y:11009661-G-T | ** | ||||||
| hg38:Y:11016815-C-A | ** | ||||||
| hg38:Y:11025087-C-A | ** | ||||||
| hg19:Y:13259189-C-A hg38:Y:11103513-C-A | ** | ||||||
| hg19:Y:13290315-T-A hg38:Y:11134639-T-A | ** | ||||||
| hg19:Y:13309919-C-A hg38:Y:11154243-C-A | ** | ||||||
| hg19:Y:13405187-T-A hg38:Y:11249511-T-A | ** | ||||||
| hg19:Y:13484802-C-A hg38:Y:11329126-C-A | ** | ||||||
| hg19:Y:13509749-C-A hg38:Y:11354073-C-A | FT444569 | ** | |||||
| hg19:Y:13515969-C-A hg38:Y:11360293-C-A | ** | ||||||
| hg19:Y:13550452-C-A hg38:Y:11394776-C-A | ** | ||||||
| hg19:Y:13617998-C-CT hg38:Y:11462322-C-CT | ** | ||||||
| hg19:Y:13637390-G-T hg38:Y:11481714-G-T | ** | ||||||
| hg19:Y:13720182-C-G hg38:Y:11564506-C-G | DYZ17 | ** | |||||
| hg38:Y:11667051-A-G | DYZ17 | ** | |||||
| hg38:Y:11673002-G-T | DYZ17 | ** | |||||
| hg19:Y:13922497-C-A hg38:Y:11801791-C-A | ** | ||||||
| hg19:Y:14007722-C-A hg38:Y:11887016-C-A | ** | ||||||
| hg19:Y:14195256-C-A hg38:Y:12074550-C-A | ** | ||||||
| hg19:Y:14250621-T-C hg38:Y:12129915-T-C | ** | ||||||
| hg19:Y:14379182-T-A hg38:Y:12258478-T-A | ** | ||||||
| hg19:Y:14382161-C-A hg38:Y:12261457-C-A | ** | ||||||
| hg19:Y:14420236-T-A hg38:Y:12299511-T-A | ** | ||||||
| hg19:Y:14421438-C-A hg38:Y:12300713-C-A | ** | ||||||
| hg19:Y:14445371-T-C hg38:Y:12324644-T-C | ** | ||||||
| hg19:Y:14446542-A-G hg38:Y:12325815-A-G | ** | ||||||
| hg19:Y:14492717-G-T hg38:Y:12380914-G-T | ** | ||||||
| hg19:Y:14507722-T-C hg38:Y:12395927-T-C | ** | ||||||
| hg19:Y:14532562-G-T hg38:Y:12420763-G-T | ** | ||||||
| hg19:Y:14550196-T-A hg38:Y:12438397-T-A | ** | ||||||
| hg19:Y:14599067-G-T hg38:Y:12487267-G-T | ** | ||||||
| hg19:Y:14608121-G-A hg38:Y:12496323-G-A | ** | ||||||
| hg19:Y:15127088-C-A hg38:Y:13015175-C-A | ** | ||||||
| hg19:Y:15170828-G-T hg38:Y:13058914-G-T | ** | ||||||
| hg19:Y:15238990-A-G hg38:Y:13127076-A-G | ** | ||||||
| hg19:Y:15364891-C-A hg38:Y:13253011-C-A | FT226760 | ** | |||||
| hg19:Y:15368881-C-A hg38:Y:13257001-C-A | ** | ||||||
| hg19:Y:15397280-C-T hg38:Y:13285400-C-T | ** | ||||||
| hg19:Y:15450327-G-A hg38:Y:13338447-G-A | ** | ||||||
| hg19:Y:15533122-G-T hg38:Y:13421242-G-T | ** | ||||||
| hg19:Y:15557996-T-C hg38:Y:13446116-T-C | ** | ||||||
| hg19:Y:15679938-C-A hg38:Y:13568058-C-A | ** | ||||||
| hg19:Y:15688188-C-A hg38:Y:13576308-C-A | ** | ||||||
| hg19:Y:15760656-C-G hg38:Y:13648776-C-G | ** | ||||||
| hg19:Y:15775286-C-A hg38:Y:13663406-C-A | ** | ||||||
| hg19:Y:15789949-C-G hg38:Y:13678069-C-G | ** | ||||||
| hg19:Y:15871639-C-A hg38:Y:13759759-C-A | ** | ||||||
| hg19:Y:15890943-A-T hg38:Y:13779063-A-T | ** | ||||||
| hg19:Y:15922441-G-A hg38:Y:13810561-G-A | ** | ||||||
| hg19:Y:16029566-C-A hg38:Y:13917686-C-A | ** | ||||||
| hg19:Y:16030120-T-C hg38:Y:13918240-T-C | ** | ||||||
| hg19:Y:16240905-A-T hg38:Y:14129025-A-T | ** | ||||||
| hg19:Y:16320036-C-T hg38:Y:14208156-C-T | ** | ||||||
| hg19:Y:16342278-A-G hg38:Y:14230398-A-G | ** | ||||||
| hg19:Y:16421281-C-A hg38:Y:14309401-C-A | ** | ||||||
| hg19:Y:16432048-C-A hg38:Y:14320168-C-A | FT131123 | ** | |||||
| hg19:Y:16470684-G-T hg38:Y:14358804-G-T | ** | ||||||
| hg19:Y:16490694-A-C hg38:Y:14378814-A-C | ** | ||||||
| hg19:Y:16493159-C-A hg38:Y:14381279-C-A | ** | ||||||
| hg19:Y:16503684-T-A hg38:Y:14391804-T-A | ** | ||||||
| hg19:Y:16539711-T-C hg38:Y:14427831-T-C | ** | ||||||
| hg19:Y:16605562-C-G hg38:Y:14493682-C-G | ** | ||||||
| hg19:Y:16645615-C-T hg38:Y:14533735-C-T | ** | ||||||
| hg19:Y:16667186-G-A hg38:Y:14555306-G-A | ** | ||||||
| hg19:Y:16688261-C-A hg38:Y:14576381-C-A | ** | ||||||
| hg19:Y:16702876-T-A hg38:Y:14590996-T-A | ** | ||||||
| hg19:Y:16707134-G-A hg38:Y:14595254-G-A | ** | ||||||
| hg19:Y:16739489-G-A hg38:Y:14627609-G-A | ** | ||||||
| hg19:Y:16777914-C-T hg38:Y:14666034-C-T | ** | ||||||
| hg19:Y:16932919-C-T hg38:Y:14821039-C-T | ** | ||||||
| hg19:Y:17014386-C-T hg38:Y:14902506-C-T | FT68205 | ** | |||||
| hg19:Y:17074875-G-A hg38:Y:14962995-G-A | FT180915 | ** | |||||
| hg19:Y:17095321-T-C hg38:Y:14983441-T-C | ** | ||||||
| hg19:Y:17103850-A-G hg38:Y:14991970-A-G | ** | ||||||
| hg19:Y:17170495-A-T hg38:Y:15058615-A-T | ** | ||||||
| hg19:Y:17666836-A-G hg38:Y:15554956-A-G | ** | ||||||
| hg19:Y:17666945-C-A hg38:Y:15555065-C-A | ** | ||||||
| hg19:Y:17716896-C-A hg38:Y:15605016-C-A | ** | ||||||
| hg19:Y:17870925-C-A hg38:Y:15759045-C-A | ** | ||||||
| hg19:Y:18172881-T-G hg38:Y:16061001-T-G | ** | ||||||
| hg19:Y:18194097-A-G hg38:Y:16082217-A-G | ** | ||||||
| hg19:Y:18346410-C-A hg38:Y:16234530-C-A | P6_Prx | ** | |||||
| hg19:Y:18443430-T-C hg38:Y:16331550-T-C | P6_Dst | ** | |||||
| hg19:Y:19112300-A-G hg38:Y:17000420-A-G | ** | ||||||
| hg19:Y:19127642-AAATAT-A hg38:Y:17015762-AAATAT-A | ** | ||||||
| hg19:Y:19187698-G-A hg38:Y:17075818-G-A | ** | ||||||
| hg19:Y:19248935-G-A hg38:Y:17137055-G-A | ** | ||||||
| hg19:Y:19415395-C-A hg38:Y:17303515-C-A | ** | ||||||
| hg19:Y:19479252-A-T hg38:Y:17367372-A-T | ** | ||||||
| hg19:Y:20004154-C-A hg38:Y:17892274-C-A | P5_Prx | ** | |||||
| hg19:Y:20243524-G-T hg38:Y:18081638-G-T | P5_Dst | ** | |||||
| hg19:Y:20640381-C-A hg38:Y:18478495-C-A | P4_Prx | ** | |||||
| hg19:Y:20648586-G-GGAAAT hg38:Y:18486700-G-GGAAAT | P4_Prx | ** | |||||
| hg19:Y:20995625-G-C hg38:Y:18833739-G-C | P4_Dst | ** | |||||
| hg19:Y:21078956-C-A hg38:Y:18917070-C-A | ** | ||||||
| hg19:Y:21134924-AAT-A hg38:Y:18973038-AAT-A | ** | ||||||
| hg19:Y:21139623-A-G hg38:Y:18977737-A-G | ** | ||||||
| hg19:Y:21383391-C-A hg38:Y:19221505-C-A | ** | ||||||
| hg19:Y:21402217-C-CT hg38:Y:19240331-C-CT | ** | ||||||
| hg19:Y:21556880-T-G hg38:Y:19394994-T-G | ** | ||||||
| hg19:Y:21670856-T-C hg38:Y:19508970-T-C | ** | ||||||
| hg19:Y:21824925-G-A hg38:Y:19663039-G-A | ** | ||||||
| hg19:Y:21836605-T-C hg38:Y:19674719-T-C | ** | ||||||
| hg19:Y:21912484-C-A hg38:Y:19750598-C-A | ** | ||||||
| hg19:Y:21939680-T-A hg38:Y:19777794-T-A | ** | ||||||
| hg19:Y:21955761-T-A hg38:Y:19793875-T-A | ** | ||||||
| hg19:Y:21991110-C-A hg38:Y:19829224-C-A | ** | ||||||
| hg19:Y:22023232-C-A hg38:Y:19861346-C-A | ** | ||||||
| hg19:Y:22132857-A-T hg38:Y:19970971-A-T | ** | ||||||
| hg19:Y:22164559-A-T hg38:Y:20002673-A-T | ** | ||||||
| hg19:Y:22170722-A-T hg38:Y:20008836-A-T | ** | ||||||
| hg19:Y:22175996-C-A hg38:Y:20014110-C-A | ** | ||||||
| hg19:Y:22188821-C-A hg38:Y:20026935-C-A | ** | ||||||
| hg19:Y:22241211-C-G hg38:Y:20079325-C-G | DYZ19 | ** | |||||
| hg19:Y:22517272-C-A hg38:Y:20355386-C-A | ** | ||||||
| hg19:Y:22624940-C-A hg38:Y:20463054-C-A | ** | ||||||
| hg19:Y:22683603-C-T hg38:Y:20521717-C-T | ** | ||||||
| hg19:Y:22730497-C-A hg38:Y:20568611-C-A | ** | ||||||
| hg19:Y:22801148-G-C hg38:Y:20639262-G-C | ** | ||||||
| hg19:Y:22809887-G-A hg38:Y:20648001-G-A | ** | ||||||
| hg19:Y:22950175-C-A hg38:Y:20788289-C-A | ** | ||||||
| hg19:Y:23009438-T-C hg38:Y:20847552-T-C | ** | ||||||
| hg19:Y:23034390-A-C hg38:Y:20872504-A-C | ** | ||||||
| hg19:Y:23034414-C-T hg38:Y:20872528-C-T | ** | ||||||
| hg19:Y:23034415-C-G hg38:Y:20872529-C-G | ** | ||||||
| hg19:Y:23034431-CA-T hg38:Y:20872545-CA-T | ** | ||||||
| hg19:Y:23099899-C-A hg38:Y:20938013-C-A | ** | ||||||
| hg19:Y:23199889-G-A hg38:Y:21038003-G-A | FTB34486 | ** | |||||
| hg19:Y:23425204-A-C hg38:Y:21263318-A-C | ** | ||||||
| hg19:Y:23742313-C-A hg38:Y:21580427-C-A | ** | ||||||
| hg19:Y:23848467-C-T hg38:Y:21686581-C-T | ** | ||||||
| hg19:Y:23953883-C-A hg38:Y:21807736-C-A | ** | ||||||
| hg19:Y:24341719-A-G hg38:Y:22195572-A-G | P3_t1 | ** | |||||
| hg19:Y:24447233-A-G hg38:Y:22301086-A-G | ** | ||||||
| hg19:Y:24466351-G-T hg38:Y:22320204-G-T | ** | ||||||
| hg19:Y:25727937-AGT-A hg38:Y:23581790-AGT-A | P1_b3 | ** | |||||
| hg19:Y:27935876-G-T hg38:Y:25789729-G-T | P1_Y2 | ** | |||||
| hg19:Y:28484454-G-C hg38:Y:26338307-G-C | ** | ||||||
| hg19:Y:28506116-C-G hg38:Y:26359969-C-G | ** | ||||||
| hg19:Y:28545826-A-T hg38:Y:26399679-A-T | ** | ||||||
| hg19:Y:28546846-T-C hg38:Y:26400699-T-C | ** | ||||||
| hg19:Y:28591906-AT-A hg38:Y:26445759-AT-A | ** | ||||||
| hg19:Y:28697481-C-A hg38:Y:26551334-C-A | FTA42228 | ** | |||||
| hg19:Y:28712109-T-A hg38:Y:26565962-T-A | ** | ||||||
| hg19:Y:28726487-A-T hg38:Y:26580340-A-T | ** | ||||||
| hg19:Y:28734821-T-C hg38:Y:26588674-T-C | ** | ||||||
| hg19:Y:28768674-C-T hg38:Y:26622527-C-T | ** | ||||||
| hg19:Y:28773659-C-A hg38:Y:26627512-C-A | ** | ||||||
| hg19:Y:28797889-A-G hg38:Y:26651742-A-G | ** | ||||||
| hg38:Y:56828264-C-CT | ** | ||||||
| hg38:Y:56828267-GT-C | ** | ||||||
| hg38:Y:56843584-C-A | ** | ||||||
| hg38:Y:56849589-T-A | ** | ||||||
| hg38:Y:56859987-C-A | ** | ||||||
| hg38:Y:56887023-G-T | ** | ||||||
| hg19:Y:6786910-TA-T hg38:Y:6918869-TA-T | *** | ||||||
| hg38:Y:10678062-G-GATTCCATTCCATTCCATTCC | *** | ||||||
| hg38:Y:11660126-C-A | DYZ17 | *** | |||||
| hg38:Y:10669496-CTCCATTCCAT-C | *** | ||||||
| hg19:Y:17503942-G-T hg38:Y:15392062-G-T | *** | ||||||
| hg19:Y:17117423-AT-A hg38:Y:15005543-AT-A | 9×T | *** | |||||
| hg38:Y:11671207-C-A | DYZ17 | *** | |||||
| hg19:Y:13489813-T-A hg38:Y:11334137-T-A | *** | ||||||
| hg19:Y:22480640-G-T hg38:Y:20318754-G-T | BY176296 | DYZ19 | *** | ||||
| hg19:Y:24359622-C-T hg38:Y:22213475-C-T | *** | ||||||
| hg19:Y:14053650-C-A hg38:Y:11932944-C-A | *** | ||||||
| hg19:Y:7133024-T-G hg38:Y:7264983-T-G | *** | ||||||
| hg19:Y:16057226-C-A hg38:Y:13945346-C-A | *** | ||||||
| hg19:Y:4781081-T-C hg38:Y:4913040-T-C | *** | ||||||
| hg19:Y:6765640-GT-G,GTTTT hg38:Y:6897599-GT-G,GTTTT | 21×T | *** | |||||
| hg19:Y:6778850-C-A hg38:Y:6910809-C-A | *** | ||||||
| hg19:Y:7133007-C-T hg38:Y:7264966-C-T | *** | ||||||
| hg19:Y:7133018-G-C hg38:Y:7264977-G-C | *** | ||||||
| hg19:Y:7133021-G-A hg38:Y:7264980-G-A | *** | ||||||
| hg19:Y:7186782-C-A hg38:Y:7318741-C-A | *** | ||||||
| hg19:Y:7418819-G-T hg38:Y:7550778-G-T | *** | ||||||
| hg19:Y:8214346-A-C hg38:Y:8346305-A-C | *** | ||||||
| hg19:Y:8441104-C-A hg38:Y:8573063-C-A | *** | ||||||
| hg19:Y:8807627-C-A hg38:Y:8939586-C-A | *** | ||||||
| hg38:Y:10631697-T-A | *** | ||||||
| hg38:Y:10631699-C-T | *** | ||||||
| hg38:Y:10647720-C-A | *** | ||||||
| hg19:Y:13484935-A-T hg38:Y:11329259-A-T | *** | ||||||
| hg38:Y:11676826-G-A | DYZ17 | *** | |||||
| hg19:Y:14279932-G-T hg38:Y:12159226-G-T | *** | ||||||
| hg19:Y:14301724-G-T hg38:Y:12181018-G-T | *** | ||||||
| hg19:Y:14315408-ATTT-A,ATTTT hg38:Y:12194702-ATTT-A,ATTTT | 16×T | *** | |||||
| hg19:Y:16647527-GC-G hg38:Y:14535647-GC-G | *** | ||||||
| hg19:Y:16905694-T-C hg38:Y:14793814-T-C | *** | ||||||
| hg19:Y:19250722-G-C hg38:Y:17138842-G-C | *** | ||||||
| hg19:Y:23380857-A-G hg38:Y:21218971-A-G | *** | ||||||
| hg19:Y:28766386-C-A hg38:Y:26620239-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 235376 | 9872851 | 8030188 | 7905406 |
| Used in age calculations | 9872851 | 8030188 | 7905406 |
| Counts of SNPs | 22 | 22 |
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