unknown
BigY2: 788995MDKA Birth:
DenmarkTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 788995 |
|---|---|---|---|---|---|---|---|
| hg19:Y:24276975-G-T hg38:Y:22130828-G-T | P3_b1 | A* | |||||
| hg19:Y:14435875-A-T hg38:Y:12315148-A-T | S1256 | Y | + | ||||
| hg19:Y:8486570-G-A hg38:Y:8618529-G-A | ZS11566 | Y | Y | + | |||
| hg19:Y:6762379-C-T hg38:Y:6894338-C-T | BY50696 | Y | Y | + | |||
| hg19:Y:7729461-C-T hg38:Y:7861420-C-T | BY50715 | Y | Y | + | |||
| hg19:Y:8544877-C-T hg38:Y:8676836-C-T | BY50727 | Y | Y | + | |||
| hg19:Y:15634360-A-G hg38:Y:13522480-A-G | BY50774 | Y | Y | + | |||
| hg19:Y:15773206-C-A hg38:Y:13661326-C-A | BY50777 | Y | Y | + | |||
| hg19:Y:17294194-T-C hg38:Y:15182314-T-C | BY50793 | Y | Y | + | |||
| hg19:Y:18754297-C-T hg38:Y:16642417-C-T | BY50812 | Y | Y | + | |||
| hg19:Y:23471198-A-C hg38:Y:21309312-A-C | BY50886 | Y | Y | + | |||
| hg19:Y:22235452-G-T hg38:Y:20073566-G-T | DYZ19 | * | |||||
| hg19:Y:22318132-G-T hg38:Y:20156246-G-T | DYZ19 | * | |||||
| hg19:Y:16041772-C-A hg38:Y:13929892-C-A | ** | ||||||
| hg19:Y:22506256-G-T hg38:Y:20344370-G-T | PF4605 | DYZ19 | ** | ||||
| hg19:Y:22300829-G-T hg38:Y:20138943-G-T | DYZ19 | ** | |||||
| hg19:Y:26120150-TTTCCTTCC-T hg38:Y:23974003-TTTCCTTCC-T | P1_Y1 | 12×TTCC | ** | ||||
| hg19:Y:22815504-TG-T hg38:Y:20653618-TG-T | ** | ||||||
| hg19:Y:24392082-T-C hg38:Y:22245935-T-C | ** | ||||||
| hg19:Y:9908291-C-A hg38:Y:10070682-C-A | Z5334 | ** | |||||
| hg19:Y:22341180-G-T hg38:Y:20179294-G-T | DYZ19 | ** | |||||
| hg19:Y:23654432-C-T hg38:Y:21492546-C-T | FT233305 | FT233305 | ** | ||||
| hg19:Y:27714957-G-T hg38:Y:25568810-G-T | P1_Y2 | ** | |||||
| hg19:Y:14395497-C-A hg38:Y:12274793-C-A | ** | ||||||
| hg19:Y:18129595-C-A hg38:Y:16017715-C-A | ** | ||||||
| hg19:Y:4918378-C-A hg38:Y:5050337-C-A | ** | ||||||
| hg19:Y:19259733-C-A hg38:Y:17147853-C-A | ** | ||||||
| hg19:Y:14294334-C-A hg38:Y:12173628-C-A | ** | ||||||
| hg19:Y:2948048-C-A hg38:Y:3080007-C-A | ** | ||||||
| hg19:Y:17616603-C-A hg38:Y:15504723-C-A | ** | ||||||
| hg38:Y:10668904-C-A | ** | ||||||
| hg38:Y:10980768-C-A | ** | ||||||
| hg19:Y:21690980-C-A hg38:Y:19529094-C-A | ** | ||||||
| hg19:Y:19057876-C-CAA hg38:Y:16945996-C-CAA | 13×A | ** | |||||
| hg19:Y:13705404-G-A hg38:Y:11549728-G-A | DYZ17 | ** | |||||
| hg38:Y:10980776-C-A | ** | ||||||
| hg19:Y:8706139-C-A hg38:Y:8838098-C-A | ** | ||||||
| hg19:Y:22117793-C-A hg38:Y:19955907-C-A | ** | ||||||
| hg19:Y:2766688-A-AT hg38:Y:2898647-A-AT | 9×T | ** | |||||
| hg38:Y:10991250-C-G | ** | ||||||
| hg19:Y:19464134-G-T hg38:Y:17352254-G-T | ** | ||||||
| hg19:Y:22067617-C-A hg38:Y:19905731-C-A | ** | ||||||
| hg19:Y:14823977-C-A hg38:Y:12712044-C-A | ** | ||||||
| hg38:Y:10899331-G-T | ** | ||||||
| hg19:Y:18430129-T-A hg38:Y:16318249-T-A | P6_Dst | ** | |||||
| hg19:Y:9828786-C-A hg38:Y:9991177-C-A | Y89295 | ** | |||||
| hg38:Y:10997728-C-A | ** | ||||||
| hg38:Y:10997751-T-C | ** | ||||||
| hg19:Y:15782002-C-A hg38:Y:13670122-C-A | ** | ||||||
| hg19:Y:13909779-C-A hg38:Y:11789073-C-A | ** | ||||||
| hg19:Y:5448931-C-A hg38:Y:5580890-C-A | ** | ||||||
| hg19:Y:5214108-C-G hg38:Y:5346067-C-G | ** | ||||||
| hg19:Y:5214118-C-A hg38:Y:5346077-C-A | ** | ||||||
| hg19:Y:7222298-C-A hg38:Y:7354257-C-A | ** | ||||||
| hg38:Y:10849756-C-T | ** | ||||||
| hg38:Y:11675094-C-A | DYZ17 | ** | |||||
| hg19:Y:16058681-C-A hg38:Y:13946801-C-A | ** | ||||||
| hg19:Y:7217177-C-A hg38:Y:7349136-C-A | ** | ||||||
| hg19:Y:13927358-CAATA-C hg38:Y:11806652-CAATA-C | 4×AATA | ** | |||||
| hg38:Y:10875034-C-A | ** | ||||||
| hg19:Y:20500902-A-C hg38:Y:18339016-A-C | P5_Dst | ** | |||||
| hg19:Y:8288581-C-A hg38:Y:8420540-C-A | ** | ||||||
| hg19:Y:2688876-G-A hg38:Y:2820835-G-A | ** | ||||||
| hg19:Y:9198132-C-A hg38:Y:9360523-C-A | ** | ||||||
| hg38:Y:10997731-T-C | ** | ||||||
| hg19:Y:13453683-TATTCC-T hg38:Y:11298007-TATTCC-T | 5×ATTCC | ** | |||||
| hg19:Y:14602677-C-A hg38:Y:12490879-C-A | ** | ||||||
| hg38:Y2:3102-G-T | ** | ||||||
| hg19:Y:9892683-C-A hg38:Y:10055074-C-A | ** | ||||||
| hg19:Y:14549309-C-CAAA hg38:Y:12437510-C-CAAA | 16×A | ** | |||||
| hg19:Y:18744358-C-A hg38:Y:16632478-C-A | ** | ||||||
| hg19:Y:14635751-A-C hg38:Y:12523820-A-C | ** | ||||||
| hg19:Y:18731128-C-A hg38:Y:16619248-C-A | ** | ||||||
| hg38:Y:10892498-C-A | ** | ||||||
| hg19:Y:14029008-C-A hg38:Y:11908302-C-A | ** | ||||||
| hg38:Y:10997789-C-A | ** | ||||||
| hg38:Y:10975984-C-A | ** | ||||||
| hg19:Y:23815461-C-A hg38:Y:21653575-C-A | ** | ||||||
| hg38:Y:10779191-C-A | ** | ||||||
| hg38:Y:10984004-C-A | ** | ||||||
| hg19:Y:16279478-C-A hg38:Y:14167598-C-A | ** | ||||||
| hg19:Y:17760390-C-A hg38:Y:15648510-C-A | ** | ||||||
| hg19:Y:7767687-GT-G hg38:Y:7899646-GT-G | ** | ||||||
| hg19:Y:18430094-CAAA-C hg38:Y:16318214-CAAA-C | P6_Dst | 28×A | ** | ||||
| hg19:Y:13594290-G-T hg38:Y:11438614-G-T | ** | ||||||
| hg19:Y:23777428-G-T hg38:Y:21615542-G-T | ** | ||||||
| hg19:Y:19111043-C-A hg38:Y:16999163-C-A | ** | ||||||
| hg19:Y:17926953-C-A hg38:Y:15815073-C-A | ** | ||||||
| hg19:Y:18029603-C-A hg38:Y:15917723-C-A | ** | ||||||
| hg19:Y:17672991-C-A hg38:Y:15561111-C-A | ** | ||||||
| hg38:Y:10983997-T-A | ** | ||||||
| hg19:Y:4757355-C-A hg38:Y:4889314-C-A | ** | ||||||
| hg19:Y:7074957-C-A hg38:Y:7206916-C-A | ** | ||||||
| hg19:Y:2688860-G-A hg38:Y:2820819-G-A | ** | ||||||
| hg19:Y:2688867-G-T hg38:Y:2820826-G-T | ** | ||||||
| hg19:Y:2755472-T-C hg38:Y:2887431-T-C | ** | ||||||
| hg19:Y:2768203-A-G hg38:Y:2900162-A-G | ** | ||||||
| hg19:Y:2928427-T-C hg38:Y:3060386-T-C | ** | ||||||
| hg19:Y:3079347-A-C hg38:Y:3211306-A-C | ** | ||||||
| hg19:Y:3178784-G-A hg38:Y:3310743-G-A | ** | ||||||
| hg19:Y:3303087-C-A hg38:Y:3435046-C-A | ** | ||||||
| hg19:Y:3572096-C-T hg38:Y:3704055-C-T | ** | ||||||
| hg19:Y:3725534-C-A hg38:Y:3857493-C-A | ** | ||||||
| hg19:Y:3753312-A-G hg38:Y:3885271-A-G | ** | ||||||
| hg19:Y:4103620-C-T hg38:Y:4235579-C-T | FT92789 | ** | |||||
| hg19:Y:4113424-T-A hg38:Y:4245383-T-A | ** | ||||||
| hg19:Y:4533733-G-A hg38:Y:4665692-G-A | ** | ||||||
| hg19:Y:4687631-C-A hg38:Y:4819590-C-A | ** | ||||||
| hg19:Y:4888758-C-A hg38:Y:5020717-C-A | ** | ||||||
| hg19:Y:5102565-G-T hg38:Y:5234524-G-T | ** | ||||||
| hg19:Y:5696786-G-T hg38:Y:5828745-G-T | ** | ||||||
| hg19:Y:5912759-G-T hg38:Y:6044718-G-T | ** | ||||||
| hg19:Y:6252395-A-T hg38:Y:6384354-A-T | IR3_Dst | ** | |||||
| hg19:Y:6426853-G-A hg38:Y:6558812-G-A | ** | ||||||
| hg19:Y:6634028-A-G hg38:Y:6765987-A-G | ** | ||||||
| hg19:Y:6634039-ACCT-A hg38:Y:6765998-ACCT-A | ** | ||||||
| hg19:Y:6759279-C-A hg38:Y:6891238-C-A | ** | ||||||
| hg19:Y:6805423-CA-C hg38:Y:6937382-CA-C | ** | ||||||
| hg19:Y:6855402-G-GGT hg38:Y:6987361-G-GGT | ** | ||||||
| hg19:Y:6920613-C-A hg38:Y:7052572-C-A | ** | ||||||
| hg19:Y:7078530-T-A hg38:Y:7210489-T-A | ** | ||||||
| hg19:Y:7127326-T-G hg38:Y:7259285-T-G | ** | ||||||
| hg19:Y:7174612-A-C hg38:Y:7306571-A-C | ** | ||||||
| hg19:Y:7237103-G-A hg38:Y:7369062-G-A | ** | ||||||
| hg19:Y:7276542-C-A hg38:Y:7408501-C-A | ** | ||||||
| hg19:Y:7340478-A-G hg38:Y:7472437-A-G | ** | ||||||
| hg19:Y:7769443-C-A hg38:Y:7901402-C-A | ** | ||||||
| hg19:Y:7858448-C-A hg38:Y:7990407-C-A | ** | ||||||
| hg19:Y:7918318-A-T hg38:Y:8050277-A-T | ** | ||||||
| hg19:Y:7940367-G-T hg38:Y:8072326-G-T | ** | ||||||
| hg19:Y:7994095-T-G hg38:Y:8126054-T-G | ** | ||||||
| hg19:Y:7996946-A-T hg38:Y:8128905-A-T | ** | ||||||
| hg19:Y:8045206-C-A hg38:Y:8177165-C-A | ** | ||||||
| hg19:Y:8078686-A-G hg38:Y:8210645-A-G | ** | ||||||
| hg19:Y:8349197-C-A hg38:Y:8481156-C-A | ** | ||||||
| hg19:Y:8351569-T-G hg38:Y:8483528-T-G | ** | ||||||
| hg19:Y:8376306-T-G hg38:Y:8508265-T-G | ** | ||||||
| hg19:Y:8462092-ACACTC-A hg38:Y:8594051-ACACTC-A | ** | ||||||
| hg19:Y:8472205-C-A hg38:Y:8604164-C-A | ** | ||||||
| hg19:Y:8674287-T-A hg38:Y:8806246-T-A | ** | ||||||
| hg19:Y:8691465-C-A hg38:Y:8823424-C-A | ** | ||||||
| hg19:Y:8720061-C-A hg38:Y:8852020-C-A | ** | ||||||
| hg19:Y:8832757-C-A hg38:Y:8964716-C-A | FTB43406 | ** | |||||
| hg19:Y:8867023-G-T hg38:Y:8998982-G-T | ** | ||||||
| hg38:Y:9109545-C-A | ** | ||||||
| hg19:Y:9041316-G-T hg38:Y:9203707-G-T | ** | ||||||
| hg19:Y:9087258-T-C hg38:Y:9249649-T-C | BY77972 | ** | |||||
| hg19:Y:9381085-C-A hg38:Y:9543476-C-A | ** | ||||||
| hg19:Y:9540263-T-G hg38:Y:9702654-T-G | IR3_Prx | ** | |||||
| hg19:Y:9544366-C-A hg38:Y:9706757-C-A | IR3_Prx | ** | |||||
| hg19:Y:9909696-G-T hg38:Y:10072087-G-T | ** | ||||||
| hg19:Y:9918600-A-G hg38:Y:10080991-A-G | ** | ||||||
| hg19:Y:10022220-G-A hg38:Y:10184611-G-A | ** | ||||||
| hg19:Y:10022227-C-G hg38:Y:10184618-C-G | ** | ||||||
| hg19:Y:10022230-T-G hg38:Y:10184621-T-G | ** | ||||||
| hg38:Y:10761163-T-G | ** | ||||||
| hg38:Y:10766397-C-A | ** | ||||||
| hg38:Y:10811600-C-A | ** | ||||||
| hg38:Y:10813321-T-G | ** | ||||||
| hg38:Y:10831613-T-A | ** | ||||||
| hg38:Y:10868987-C-A | ** | ||||||
| hg38:Y:10887564-C-A | ** | ||||||
| hg38:Y:10892513-C-A | ** | ||||||
| hg38:Y:10900272-G-T | ** | ||||||
| hg38:Y:10930926-C-T | ** | ||||||
| hg38:Y:10931658-C-A | ** | ||||||
| hg38:Y:10945116-C-T | FT127747 | ** | |||||
| hg38:Y:10973340-C-A | ** | ||||||
| hg38:Y:10975896-C-A | Y92861 | FT171753 | ** | ||||
| hg38:Y:10983984-C-T | ** | ||||||
| hg38:Y:10983992-T-A | ** | ||||||
| hg38:Y:10997749-C-T | ** | ||||||
| hg38:Y:10997753-C-T | ** | ||||||
| hg38:Y:11013986-C-A | ** | ||||||
| hg38:Y:11023076-C-A | ** | ||||||
| hg19:Y:13248313-C-A hg38:Y:11092637-C-A | ** | ||||||
| hg19:Y:13253951-C-A hg38:Y:11098275-C-A | ** | ||||||
| hg19:Y:13306155-T-G hg38:Y:11150479-T-G | ** | ||||||
| hg19:Y:13446403-C-A hg38:Y:11290727-C-A | ** | ||||||
| hg38:Y:11663721-G-T | DYZ17 | ** | |||||
| hg38:Y:11670773-C-A | DYZ17 | ** | |||||
| hg38:Y:11674534-G-T | DYZ17 | ** | |||||
| hg19:Y:13933321-G-T hg38:Y:11812615-G-T | ** | ||||||
| hg19:Y:13946051-C-A hg38:Y:11825345-C-A | ** | ||||||
| hg19:Y:14005757-A-G hg38:Y:11885051-A-G | ** | ||||||
| hg19:Y:14025753-A-C hg38:Y:11905047-A-C | ** | ||||||
| hg19:Y:14048104-C-A hg38:Y:11927398-C-A | ** | ||||||
| hg19:Y:14052754-C-A hg38:Y:11932048-C-A | ** | ||||||
| hg19:Y:14061292-T-C hg38:Y:11940586-T-C | BY92685 | ** | |||||
| hg19:Y:14159546-T-G hg38:Y:12038840-T-G | ** | ||||||
| hg19:Y:14205074-C-A hg38:Y:12084368-C-A | ** | ||||||
| hg19:Y:14243702-A-G hg38:Y:12122996-A-G | ** | ||||||
| hg19:Y:14254466-A-G hg38:Y:12133760-A-G | ** | ||||||
| hg19:Y:14317269-C-A hg38:Y:12196563-C-A | ** | ||||||
| hg19:Y:14421896-C-A hg38:Y:12301171-C-A | ** | ||||||
| hg19:Y:14454411-C-A hg38:Y:12333684-C-A | ** | ||||||
| hg19:Y:14463638-T-C hg38:Y:12342911-T-C | ** | ||||||
| hg19:Y:14491340-C-A hg38:Y:12379537-C-A | BY96104 | ** | |||||
| hg19:Y:14505316-T-TG hg38:Y:12393521-T-TG | ** | ||||||
| hg19:Y:14596209-C-A hg38:Y:12484409-C-A | ** | ||||||
| hg19:Y:14702103-T-C hg38:Y:12590169-T-C | ** | ||||||
| hg19:Y:14746064-G-A hg38:Y:12634133-G-A | ** | ||||||
| hg19:Y:14746080-G-T hg38:Y:12634149-G-T | ** | ||||||
| hg19:Y:14754070-T-G hg38:Y:12642139-T-G | ** | ||||||
| hg19:Y:14762375-C-A hg38:Y:12650444-C-A | ** | ||||||
| hg19:Y:14784790-C-A hg38:Y:12672860-C-A | ** | ||||||
| hg19:Y:14787324-C-A hg38:Y:12675394-C-A | ** | ||||||
| hg19:Y:14817498-C-A hg38:Y:12705569-C-A | ** | ||||||
| hg19:Y:14844605-G-T hg38:Y:12732671-G-T | ** | ||||||
| hg19:Y:14950495-C-A hg38:Y:12838569-C-A | ** | ||||||
| hg19:Y:14950497-T-TC hg38:Y:12838571-T-TC | ** | ||||||
| hg19:Y:14960334-C-G hg38:Y:12848409-C-G | ** | ||||||
| hg19:Y:14988678-T-C hg38:Y:12876744-T-C | ** | ||||||
| hg19:Y:15060799-C-A hg38:Y:12948891-C-A | ** | ||||||
| hg19:Y:15149804-A-G hg38:Y:13037891-A-G | ** | ||||||
| hg19:Y:15411774-C-A hg38:Y:13299894-C-A | ** | ||||||
| hg19:Y:15433089-A-G hg38:Y:13321209-A-G | ** | ||||||
| hg19:Y:15642196-AAACCTAATATCATATAAAAATGG-A hg38:Y:13530316-AAACCTAATATCATATAAAAATGG-A | ** | ||||||
| hg19:Y:15695743-T-C hg38:Y:13583863-T-C | ** | ||||||
| hg19:Y:15727286-G-C hg38:Y:13615406-G-C | BY103643 | ** | |||||
| hg19:Y:15799275-T-C hg38:Y:13687395-T-C | ** | ||||||
| hg19:Y:15916489-G-T hg38:Y:13804609-G-T | ** | ||||||
| hg19:Y:15975342-C-A hg38:Y:13863462-C-A | ** | ||||||
| hg19:Y:16071206-C-A hg38:Y:13959326-C-A | ** | ||||||
| hg19:Y:16468833-A-T hg38:Y:14356953-A-T | ** | ||||||
| hg19:Y:16510202-C-A hg38:Y:14398322-C-A | ** | ||||||
| hg19:Y:16517117-T-TA hg38:Y:14405237-T-TA | 8×A | ** | |||||
| hg19:Y:16620320-C-A hg38:Y:14508440-C-A | ** | ||||||
| hg19:Y:16635816-T-A hg38:Y:14523936-T-A | ** | ||||||
| hg19:Y:16757271-C-T hg38:Y:14645391-C-T | ** | ||||||
| hg19:Y:16933135-T-C hg38:Y:14821255-T-C | ** | ||||||
| hg19:Y:16962932-C-A hg38:Y:14851052-C-A | ** | ||||||
| hg19:Y:16963169-GTGA-G hg38:Y:14851289-GTGA-G | ** | ||||||
| hg19:Y:16990887-C-T hg38:Y:14879007-C-T | BY111610 | ** | |||||
| hg19:Y:17106435-T-G hg38:Y:14994555-T-G | ** | ||||||
| hg19:Y:17185151-C-A hg38:Y:15073271-C-A | ** | ||||||
| hg19:Y:17234280-C-A hg38:Y:15122400-C-A | ** | ||||||
| hg19:Y:17246749-C-A hg38:Y:15134869-C-A | ** | ||||||
| hg19:Y:17591905-A-C hg38:Y:15480025-A-C | ** | ||||||
| hg19:Y:17650236-A-C hg38:Y:15538356-A-C | ** | ||||||
| hg19:Y:17695766-C-A hg38:Y:15583886-C-A | ** | ||||||
| hg19:Y:17864904-C-A hg38:Y:15753024-C-A | ** | ||||||
| hg19:Y:17912317-A-T hg38:Y:15800437-A-T | BY211727 | ** | |||||
| hg19:Y:18127518-C-A hg38:Y:16015638-C-A | ** | ||||||
| hg19:Y:18270518-G-C hg38:Y:16158638-G-C | ** | ||||||
| hg19:Y:18270538-T-C hg38:Y:16158658-T-C | ** | ||||||
| hg19:Y:18270539-G-A hg38:Y:16158659-G-A | ** | ||||||
| hg19:Y:18270566-G-A hg38:Y:16158686-G-A | FT420556 | ** | |||||
| hg19:Y:18270570-ATAG-A hg38:Y:16158690-ATAG-A | ** | ||||||
| hg19:Y:18270577-G-GCAT hg38:Y:16158697-G-GCAT | ** | ||||||
| hg19:Y:18430026-AT-A hg38:Y:16318146-AT-A | P6_Dst | ** | |||||
| hg19:Y:18430134-G-T hg38:Y:16318254-G-T | P6_Dst | ** | |||||
| hg19:Y:18612976-T-C hg38:Y:16501096-T-C | ** | ||||||
| hg19:Y:18738115-T-C hg38:Y:16626235-T-C | ** | ||||||
| hg19:Y:18762315-C-A hg38:Y:16650435-C-A | ** | ||||||
| hg19:Y:18886783-C-A hg38:Y:16774903-C-A | ** | ||||||
| hg19:Y:18978934-C-A hg38:Y:16867054-C-A | ** | ||||||
| hg19:Y:19058831-G-A hg38:Y:16946951-G-A | ** | ||||||
| hg19:Y:19214273-C-A hg38:Y:17102393-C-A | ** | ||||||
| hg19:Y:19472936-C-A hg38:Y:17361056-C-A | ** | ||||||
| hg19:Y:19535063-A-G hg38:Y:17423183-A-G | ** | ||||||
| hg19:Y:19673309-T-A hg38:Y:17561429-T-A | P5_Prx | ** | |||||
| hg19:Y:19673350-GC-G hg38:Y:17561470-GC-G | P5_Prx | ** | |||||
| hg19:Y:19673953-C-A hg38:Y:17562073-C-A | P5_Prx | ** | |||||
| hg19:Y:20635019-GAT-G hg38:Y:18473133-GAT-G | P4_Prx | ** | |||||
| hg19:Y:20648943-G-T hg38:Y:18487057-G-T | P4_Prx | ** | |||||
| hg19:Y:20758774-A-T hg38:Y:18596888-A-T | P4_Prx | ** | |||||
| hg19:Y:20758786-A-T hg38:Y:18596900-A-T | P4_Prx | ** | |||||
| hg19:Y:20839660-C-A hg38:Y:18677774-C-A | P4_Gap | ** | |||||
| hg19:Y:21140104-C-A hg38:Y:18978218-C-A | ** | ||||||
| hg19:Y:21172594-C-A hg38:Y:19010708-C-A | ** | ||||||
| hg19:Y:21234696-A-C hg38:Y:19072810-A-C | ** | ||||||
| hg19:Y:21234731-T-G hg38:Y:19072845-T-G | ** | ||||||
| hg19:Y:21235818-C-A hg38:Y:19073932-C-A | ** | ||||||
| hg19:Y:21306644-A-C hg38:Y:19144758-A-C | ** | ||||||
| hg19:Y:21326662-C-A hg38:Y:19164776-C-A | ** | ||||||
| hg19:Y:21360510-C-A hg38:Y:19198624-C-A | ** | ||||||
| hg19:Y:21366085-C-A hg38:Y:19204199-C-A | ** | ||||||
| hg19:Y:21368881-G-A hg38:Y:19206995-G-A | ** | ||||||
| hg19:Y:21388681-T-G hg38:Y:19226795-T-G | ** | ||||||
| hg19:Y:21411476-C-A hg38:Y:19249590-C-A | ** | ||||||
| hg19:Y:21437568-A-C hg38:Y:19275682-A-C | ** | ||||||
| hg19:Y:21589672-A-C hg38:Y:19427786-A-C | ** | ||||||
| hg19:Y:22032668-G-T hg38:Y:19870782-G-T | ** | ||||||
| hg19:Y:22114924-T-G hg38:Y:19953038-T-G | ** | ||||||
| hg19:Y:22133151-C-A hg38:Y:19971265-C-A | ** | ||||||
| hg19:Y:22147859-C-A hg38:Y:19985973-C-A | ** | ||||||
| hg19:Y:22167460-T-C hg38:Y:20005574-T-C | ** | ||||||
| hg19:Y:22207554-T-A hg38:Y:20045668-T-A | ** | ||||||
| hg19:Y:22208809-C-A hg38:Y:20046923-C-A | ** | ||||||
| hg19:Y:22215420-G-A hg38:Y:20053534-G-A | ** | ||||||
| hg19:Y:22252749-C-A hg38:Y:20090863-C-A | DYZ19 | ** | |||||
| hg19:Y:22508166-A-G hg38:Y:20346280-A-G | DYZ19 | ** | |||||
| hg19:Y:22510195-A-TC hg38:Y:20348309-A-TC | DYZ19 | ** | |||||
| hg19:Y:22510198-GC-G hg38:Y:20348312-GC-G | DYZ19 | ** | |||||
| hg19:Y:22739657-C-G hg38:Y:20577771-C-G | ** | ||||||
| hg19:Y:22829499-A-C hg38:Y:20667613-A-C | ** | ||||||
| hg19:Y:22886089-C-A hg38:Y:20724203-C-A | ** | ||||||
| hg19:Y:22899800-CACTG-C hg38:Y:20737914-CACTG-C | ** | ||||||
| hg19:Y:22991880-C-A hg38:Y:20829994-C-A | ** | ||||||
| hg19:Y:23029855-A-C hg38:Y:20867969-A-C | ** | ||||||
| hg19:Y:23068550-C-A hg38:Y:20906664-C-A | ** | ||||||
| hg19:Y:23421186-C-A hg38:Y:21259300-C-A | ** | ||||||
| hg19:Y:23425542-C-A hg38:Y:21263656-C-A | ** | ||||||
| hg19:Y:23780067-G-A hg38:Y:21618181-G-A | ** | ||||||
| hg19:Y:23780072-T-C hg38:Y:21618186-T-C | ** | ||||||
| hg19:Y:23780085-A-T hg38:Y:21618199-A-T | ** | ||||||
| hg19:Y:23869940-C-A hg38:Y:21708054-C-A | ** | ||||||
| hg19:Y:24502425-C-A hg38:Y:22356278-C-A | ** | ||||||
| hg19:Y:24875625-G-T hg38:Y:22729478-G-T | g1 | ** | |||||
| hg19:Y:28064049-C-A hg38:Y:25917902-C-A | P1_Y2 | ** | |||||
| hg19:Y:28483601-C-T hg38:Y:26337454-C-T | ** | ||||||
| hg19:Y:28549062-C-A hg38:Y:26402915-C-A | ** | ||||||
| hg38:Y:56847531-C-A | ** | ||||||
| hg19:Y:14247868-A-T hg38:Y:12127162-A-T | PF1630 M5129 CTS2284 | *** | |||||
| hg19:Y:19091408-T-G hg38:Y:16979528-T-G | BY55149 | *** | |||||
| hg19:Y:17421471-C-A hg38:Y:15309591-C-A | Y10822 | *** | |||||
| hg19:Y:14407169-CTT-C,CT hg38:Y:12286467-CTT-C,CT | 16×T | *** | |||||
| hg19:Y:21687983-C-G hg38:Y:19526097-C-G | *** | ||||||
| hg19:Y:16643402-C-A hg38:Y:14531522-C-A | *** | ||||||
| hg19:Y:2862892-CAA-C,CAAA hg38:Y:2994851-CAA-C,CAAA | 18×A | *** | |||||
| hg19:Y:17500760-G-T hg38:Y:15388880-G-T | *** | ||||||
| hg38:Y:10965647-T-C | *** | ||||||
| hg19:Y:3407701-C-A hg38:Y:3539660-C-A | *** | ||||||
| hg38:Y:10965621-C-CTGCAT | *** | ||||||
| hg38:Y:10935601-C-G | *** | ||||||
| hg19:Y:2821377-CA-C,CAA hg38:Y:2953336-CA-C,CAA | 17×A | *** | |||||
| hg38:Y:10924380-T-C | *** | ||||||
| hg19:Y:19529008-C-A hg38:Y:17417128-C-A | *** | ||||||
| hg38:Y:10935636-C-G | *** | ||||||
| hg19:Y:4504950-C-A hg38:Y:4636909-C-A | *** | ||||||
| hg19:Y:16440353-C-A hg38:Y:14328473-C-A | *** | ||||||
| hg38:Y:11649345-C-A | DYZ17 | *** | |||||
| hg19:Y:18627790-C-A hg38:Y:16515910-C-A | *** | ||||||
| hg19:Y:3848990-C-A hg38:Y:3980949-C-A | *** | ||||||
| hg19:Y:21890760-C-A hg38:Y:19728874-C-A | *** | ||||||
| hg19:Y:14619950-C-A hg38:Y:12508148-C-A | *** | ||||||
| hg38:Y:10789943-A-G | *** | ||||||
| hg38:Y:10789951-C-T | *** | ||||||
| hg38:Y:10789955-T-G | *** | ||||||
| hg19:Y:21596809-C-A hg38:Y:19434923-C-A | *** | ||||||
| hg19:Y:2789034-C-T hg38:Y:2920993-C-T | *** | ||||||
| hg19:Y:4222976-C-A hg38:Y:4354935-C-A | *** | ||||||
| hg19:Y:5796586-C-A hg38:Y:5928545-C-A | *** | ||||||
| hg19:Y:6733809-C-A hg38:Y:6865768-C-A | *** | ||||||
| hg19:Y:6734237-T-C hg38:Y:6866196-T-C | *** | ||||||
| hg19:Y:7081916-C-A hg38:Y:7213875-C-A | *** | ||||||
| hg19:Y:7665517-C-A hg38:Y:7797476-C-A | *** | ||||||
| hg19:Y:7764345-C-A hg38:Y:7896304-C-A | *** | ||||||
| hg19:Y:7850756-C-A hg38:Y:7982715-C-A | *** | ||||||
| hg19:Y:7854669-C-A hg38:Y:7986628-C-A | *** | ||||||
| hg19:Y:8095214-T-G hg38:Y:8227173-T-G | *** | ||||||
| hg19:Y:8100381-T-C hg38:Y:8232340-T-C | *** | ||||||
| hg19:Y:8144788-C-A hg38:Y:8276747-C-A | *** | ||||||
| hg19:Y:8145424-G-A hg38:Y:8277383-G-A | *** | ||||||
| hg19:Y:8349552-T-C hg38:Y:8481511-T-C | *** | ||||||
| hg19:Y:8571150-CA-C,CAA hg38:Y:8703109-CA-C,CAA | 14×A | *** | |||||
| hg19:Y:8675041-C-A hg38:Y:8807000-C-A | *** | ||||||
| hg19:Y:8703679-C-A hg38:Y:8835638-C-A | *** | ||||||
| hg19:Y:8704087-C-A hg38:Y:8836046-C-A | *** | ||||||
| hg19:Y:8705337-C-A hg38:Y:8837296-C-A | FT115941 | *** | |||||
| hg19:Y:9090768-C-A hg38:Y:9253159-C-A | *** | ||||||
| hg19:Y:9504055-A-G hg38:Y:9666446-A-G | *** | ||||||
| hg38:Y:10662601-C-A | *** | ||||||
| hg38:Y:10750457-C-A | *** | ||||||
| hg38:Y:10764063-G-T | *** | ||||||
| hg38:Y:10802456-C-A | *** | ||||||
| hg38:Y:10947265-C-A | *** | ||||||
| hg38:Y:10974663-C-A | *** | ||||||
| hg19:Y:13482377-T-A hg38:Y:11326701-T-A | *** | ||||||
| hg19:Y:13624352-GTATA-G,GTATATA hg38:Y:11468676-GTATA-G,GTATATA | 11×TA | *** | |||||
| hg19:Y:14065968-C-A hg38:Y:11945262-C-A | *** | ||||||
| hg19:Y:14392735-CTTTTTTT-C hg38:Y:12272031-CTTTTTTT-C | 17×T | *** | |||||
| hg19:Y:14398469-G-T hg38:Y:12277765-G-T | *** | ||||||
| hg19:Y:14700287-C-A hg38:Y:12588353-C-A | *** | ||||||
| hg19:Y:14777117-C-A hg38:Y:12665186-C-A | *** | ||||||
| hg19:Y:14783946-C-A hg38:Y:12672016-C-A | *** | ||||||
| hg19:Y:14818871-GT-G hg38:Y:12706942-GT-G | 9×T | *** | |||||
| hg19:Y:14859953-G-T hg38:Y:12748019-G-T | FT392043 | *** | |||||
| hg19:Y:14953309-C-A hg38:Y:12841383-C-A | *** | ||||||
| hg19:Y:15151681-C-A hg38:Y:13039768-C-A | *** | ||||||
| hg19:Y:15192207-C-A hg38:Y:13080293-C-A | *** | ||||||
| hg19:Y:15221624-C-A hg38:Y:13109710-C-A | *** | ||||||
| hg19:Y:15326494-T-A hg38:Y:13214612-T-A | *** | ||||||
| hg19:Y:15399721-A-G hg38:Y:13287841-A-G | *** | ||||||
| hg19:Y:15438222-C-A hg38:Y:13326342-C-A | *** | ||||||
| hg19:Y:15460487-T-C hg38:Y:13348607-T-C | *** | ||||||
| hg19:Y:15561958-A-G hg38:Y:13450078-A-G | *** | ||||||
| hg19:Y:15653219-CCACA-C hg38:Y:13541339-CCACA-C | *** | ||||||
| hg19:Y:16217564-G-A hg38:Y:14105684-G-A | *** | ||||||
| hg19:Y:16313015-G-A hg38:Y:14201135-G-A | *** | ||||||
| hg19:Y:16341354-C-A hg38:Y:14229474-C-A | *** | ||||||
| hg19:Y:16427823-G-T hg38:Y:14315943-G-T | *** | ||||||
| hg19:Y:17510564-C-A hg38:Y:15398684-C-A | *** | ||||||
| hg19:Y:17853145-G-A hg38:Y:15741265-G-A | *** | ||||||
| hg19:Y:17963092-C-A hg38:Y:15851212-C-A | *** | ||||||
| hg19:Y:18144304-A-G hg38:Y:16032424-A-G | *** | ||||||
| hg19:Y:18198354-C-A hg38:Y:16086474-C-A | *** | ||||||
| hg19:Y:18226064-G-A hg38:Y:16114184-G-A | FT181420 | *** | |||||
| hg19:Y:18693939-C-A hg38:Y:16582059-C-A | *** | ||||||
| hg19:Y:18717876-TAA-T,TAAAA hg38:Y:16605996-TAA-T,TAAAA | 16×A | *** | |||||
| hg19:Y:18768206-T-G hg38:Y:16656326-T-G | *** | ||||||
| hg19:Y:18961775-C-A hg38:Y:16849895-C-A | *** | ||||||
| hg19:Y:21317812-C-A hg38:Y:19155926-C-A | *** | ||||||
| hg19:Y:21563855-C-A hg38:Y:19401969-C-A | *** | ||||||
| hg19:Y:21675374-C-A hg38:Y:19513488-C-A | *** | ||||||
| hg19:Y:21772401-C-A hg38:Y:19610515-C-A | *** | ||||||
| hg19:Y:21875336-C-T hg38:Y:19713450-C-T | *** | ||||||
| hg19:Y:22025101-C-A hg38:Y:19863215-C-A | *** | ||||||
| hg19:Y:22171547-G-T hg38:Y:20009661-G-T | *** | ||||||
| hg19:Y:22518753-TA-T,TAA hg38:Y:20356867-TA-T,TAA | 14×A | *** | |||||
| hg19:Y:22793581-C-A hg38:Y:20631695-C-A | *** | ||||||
| hg19:Y:23081857-T-A hg38:Y:20919971-T-A | *** | ||||||
| hg19:Y:23089021-A-AT hg38:Y:20927135-A-AT | 8×T | *** | |||||
| hg19:Y:23197251-C-A hg38:Y:21035365-C-A | 9×T | *** | |||||
| hg19:Y:23967215-GA-G hg38:Y:21821068-GA-G | 9×A | *** | |||||
| hg19:Y:24433646-C-A hg38:Y:22287499-C-A | *** | ||||||
| hg19:Y:28609740-G-A hg38:Y:26463593-G-A | *** | ||||||
| hg19:Y:28733914-G-A hg38:Y:26587767-G-A | *** | ||||||
| hg19:Y:28733924-G-A hg38:Y:26587777-G-A | *** | ||||||
| hg38:Y:56861823-A-ACG | *** | ||||||
| hg38:Y:56861830-A-AC,C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 788995 | 8496688 | 6946660 | 6904184 |
| Used in age calculations | 8496688 | 6946660 | 6904184 |
| Counts of SNPs | 10 | 9 |
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