Hourihane
BigY2: 253758MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 253758 |
---|---|---|---|---|---|---|---|
hg19:Y:24588021-A-AT hg38:Y:22441874-A-AT | P3_t2 | 11×T | A* | ||||
hg19:Y:22289973-A-C hg38:Y:20128087-A-C | DYZ19 | A* | |||||
hg19:Y:6679254-A-G hg38:Y:6811213-A-G | BY60709 | Y | Y | + | |||
hg19:Y:7686911-G-A hg38:Y:7818870-G-A | BY66902 | Y | Y | + | |||
hg19:Y:16493924-T-C hg38:Y:14382044-T-C | BY108189 | Y | Y | + | |||
hg19:Y:17996618-C-T hg38:Y:15884738-C-T | BY119053 | P7_Gap | Y | + | |||
hg19:Y:21237947-C-T hg38:Y:19076061-C-T | BY131342 | Y | Y | + | |||
hg19:Y:23353804-T-C hg38:Y:21191918-T-C | BY144786 | Y | Y | + | |||
hg19:Y:28612576-A-G hg38:Y:26466429-A-G | BY150764 | Y | + | ||||
hg19:Y:28438220-G-A hg38:Y:26292073-G-A | P1_gr2 | ** | |||||
hg19:Y:13484779-A-C hg38:Y:11329103-A-C | ** | ||||||
hg19:Y:13474531-G-T hg38:Y:11318855-G-T | ** | ||||||
hg19:Y:7165279-G-T hg38:Y:7297238-G-T | ** | ||||||
hg19:Y:59017469-T-A hg38:Y:56871322-T-A | ** | ||||||
hg19:Y:13474509-T-A hg38:Y:11318833-T-A | ** | ||||||
hg19:Y:13487740-CCCT-C hg38:Y:11332064-CCCT-C | ** | ||||||
hg19:Y:21306549-C-A hg38:Y:19144663-C-A | ** | ||||||
hg19:Y:6267714-A-G hg38:Y:6399673-A-G | BY160662 | IR3_Dst | ** | ||||
hg19:Y:22742429-C-A hg38:Y:20580543-C-A | ** | ||||||
hg19:Y:13474493-C-A hg38:Y:11318817-C-A | ** | ||||||
hg38:Y:10781233-T-A | ** | ||||||
hg19:Y:27795119-C-CTA hg38:Y:25648972-C-CTA | P1_Y2 | ** | |||||
hg38:Y:10989452-C-A | ** | ||||||
hg38:Y:10974063-C-T | ** | ||||||
hg38:Y:10974064-C-T | ** | ||||||
hg38:Y:10974067-A-C | ** | ||||||
hg38:Y:10974079-GT-A | ** | ||||||
hg38:Y:10974094-G-T | ** | ||||||
hg38:Y:10974101-C-T | ** | ||||||
hg38:Y:10952227-T-G | ** | ||||||
hg38:Y:10815130-A-T | ** | ||||||
hg19:Y:25571908-C-A hg38:Y:23425761-C-A | P1_gr1 | ** | |||||
hg19:Y:18185307-C-A hg38:Y:16073427-C-A | ** | ||||||
hg38:Y:10993056-C-G | ** | ||||||
hg38:Y:10988779-C-A | ** | ||||||
hg38:Y:10816117-C-T | ** | ||||||
hg38:Y:10748301-C-A | ** | ||||||
hg19:Y:19770211-C-A hg38:Y:17658331-C-A | P5_Prx | ** | |||||
hg19:Y:14532069-C-A hg38:Y:12420270-C-A | ** | ||||||
hg38:Y:10934510-C-A | ** | ||||||
hg19:Y:15730497-C-A hg38:Y:13618617-C-A | ** | ||||||
hg19:Y:14402480-T-G hg38:Y:12281777-T-G | ** | ||||||
hg38:Y:10900138-T-C | ** | ||||||
hg38:Y:10974093-T-A | ** | ||||||
hg19:Y:4703541-C-A hg38:Y:4835500-C-A | ** | ||||||
hg38:Y:10769415-C-T | ** | ||||||
hg19:Y:7414276-TCAAAAAA-T hg38:Y:7546235-TCAAAAAA-T | ** | ||||||
hg38:Y:10769436-T-A | ** | ||||||
hg38:Y:10900150-C-T | ** | ||||||
hg38:Y:10940870-A-G | ** | ||||||
hg38:Y:10762988-CTCCTT-C | ** | ||||||
hg38:Y:10748304-T-C | ** | ||||||
hg38:Y:10748317-C-T | ** | ||||||
hg38:Y:10940880-G-T | ** | ||||||
hg19:Y:6233688-G-T hg38:Y:6365647-G-T | IR3_Dst | ** | |||||
hg19:Y:9172694-C-A hg38:Y:9335085-C-A | ** | ||||||
hg19:Y:16345116-A-T hg38:Y:14233236-A-T | ** | ||||||
hg38:Y:10763025-G-A | ** | ||||||
hg38:Y:10989169-C-T | ** | ||||||
hg19:Y:15338801-C-A hg38:Y:13226919-C-A | ** | ||||||
hg19:Y:19187385-ATTTTTTT-A hg38:Y:17075505-ATTTTTTT-A | 28×T | ** | |||||
hg38:Y:10688986-G-A | ** | ||||||
hg38:Y:10983516-C-T | ** | ||||||
hg38:Y:10983517-A-G | ** | ||||||
hg38:Y:10983520-G-A | FT439164 | ** | |||||
hg38:Y:10983540-G-C | ** | ||||||
hg38:Y:10983545-C-T | ** | ||||||
hg38:Y:10983550-G-T | FT439167 | ** | |||||
hg38:Y:10653507-C-T | ** | ||||||
hg38:Y:10979798-C-T | ** | ||||||
hg38:Y:10971945-T-A | ** | ||||||
hg38:Y:10971961-C-A | ** | ||||||
hg38:Y:10971966-C-G | ** | ||||||
hg38:Y:10763323-C-T | ** | ||||||
hg38:Y:10763332-TTTCC-T | ** | ||||||
hg19:Y:18743401-A-C hg38:Y:16631521-A-C | ** | ||||||
hg38:Y:10769441-A-ATTGCC | ** | ||||||
hg19:Y:3343805-C-A hg38:Y:3475764-C-A | ** | ||||||
hg19:Y:13898930-G-A hg38:Y:11778224-G-A | Y38081 | ** | |||||
hg19:Y:15047493-C-T hg38:Y:12935584-C-T | ** | ||||||
hg19:Y:13474524-G-T hg38:Y:11318848-G-T | ** | ||||||
hg19:Y:13474544-G-GT hg38:Y:11318868-G-GT | ** | ||||||
hg19:Y:13474547-GC-G hg38:Y:11318871-GC-G | ** | ||||||
hg38:Y:10781288-C-G | ** | ||||||
hg38:Y:10945055-G-T | ** | ||||||
hg19:Y:14458448-C-A hg38:Y:12337721-C-A | ** | ||||||
hg19:Y:16042793-C-A hg38:Y:13930913-C-A | ** | ||||||
hg38:Y:10781286-T-C | ** | ||||||
hg19:Y:6244486-CA-C hg38:Y:6376445-CA-C | IR3_Dst | ** | |||||
hg38:Y:11644808-C-A | DYZ17 | ** | |||||
hg38:Y:10815146-C-T | ** | ||||||
hg19:Y:4094549-C-A hg38:Y:4226508-C-A | ** | ||||||
hg19:Y:16413698-C-A hg38:Y:14301818-C-A | ** | ||||||
hg38:Y:10919015-G-T | ** | ||||||
hg19:Y:2701408-A-G hg38:Y:2833367-A-G | ** | ||||||
hg19:Y:17370780-C-A hg38:Y:15258900-C-A | ** | ||||||
hg19:Y:4223298-C-A hg38:Y:4355257-C-A | ** | ||||||
hg19:Y:7131380-A-C hg38:Y:7263339-A-C | ** | ||||||
hg19:Y:21694842-C-A hg38:Y:19532956-C-A | ** | ||||||
hg38:Y:10809586-T-C | FT432195 | ** | |||||
hg19:Y:21554473-ATTTTTT-A hg38:Y:19392587-ATTTTTT-A | 17×T | ** | |||||
hg38:Y:10655983-C-A | ** | ||||||
hg19:Y:15767089-C-A hg38:Y:13655209-C-A | ** | ||||||
hg38:Y:11034590-C-T | ** | ||||||
hg19:Y:27808649-G-T hg38:Y:25662502-G-T | P1_Y2 | ** | |||||
hg19:Y:28068165-T-TGG hg38:Y:25922018-T-TGG | P1_Y2 | ** | |||||
hg19:Y:9856070-C-A hg38:Y:10018461-C-A | ** | ||||||
hg38:Y:10979845-ACTGAT-A | ** | ||||||
hg38:Y:10746707-G-C | ** | ||||||
hg38:Y:10920439-A-T | ** | ||||||
hg38:Y:10920448-C-A | ** | ||||||
hg38:Y:10669401-T-C | ** | ||||||
hg19:Y:3131058-C-A hg38:Y:3263017-C-A | ** | ||||||
hg19:Y:14502677-C-A hg38:Y:12390882-C-A | ** | ||||||
hg38:Y:10810595-G-T | ** | ||||||
hg38:Y:10818261-C-A | ** | ||||||
hg38:Y:9056260-C-A | ** | ||||||
hg19:Y:21146378-C-A hg38:Y:18984492-C-A | ** | ||||||
hg19:Y:5772552-CT-C hg38:Y:5904511-CT-C | 10×T | ** | |||||
hg19:Y:23128586-C-A hg38:Y:20966700-C-A | ** | ||||||
hg38:Y:10940878-C-T | ** | ||||||
hg19:Y:4700517-C-A hg38:Y:4832476-C-A | ** | ||||||
hg19:Y:18013954-ATG-A hg38:Y:15902074-ATG-A | P7_Dst | 9×TG | ** | ||||
hg38:Y:10746705-C-T | ** | ||||||
hg38:Y:10979790-C-T | ** | ||||||
hg19:Y:18125643-C-A hg38:Y:16013763-C-A | ** | ||||||
hg38:Y:10746700-C-T | ** | ||||||
hg38:Y:10769395-C-A | ** | ||||||
hg38:Y:10898980-A-C | ** | ||||||
hg38:Y:10671590-C-G | ** | ||||||
hg38:Y:11011477-C-G | ** | ||||||
hg38:Y:10920435-C-A | ** | ||||||
hg38:Y:10920437-A-G | ** | ||||||
hg38:Y:10920441-G-A | ** | ||||||
hg19:Y:28767115-C-A hg38:Y:26620968-C-A | ** | ||||||
hg38:Y:11034574-A-T | ** | ||||||
hg38:Y:11034612-A-C | ** | ||||||
hg38:Y:10940913-T-C | ** | ||||||
hg19:Y:28700421-C-A hg38:Y:26554274-C-A | ** | ||||||
hg19:Y:14560741-C-A hg38:Y:12448942-C-A | ** | ||||||
hg38:Y:11644794-C-A | DYZ17 | ** | |||||
hg38:Y:10763005-C-T | ** | ||||||
hg19:Y:3500996-C-A hg38:Y:3632955-C-A | ** | ||||||
hg19:Y:7107011-CTATATATATA-C hg38:Y:7238970-CTATATATATA-C | 20×TA | ** | |||||
hg38:Y:10843686-C-A | ** | ||||||
hg38:Y:10843750-C-G | ** | ||||||
hg38:Y:10989406-G-A | ** | ||||||
hg19:Y:13578456-C-A hg38:Y:11422780-C-A | ** | ||||||
hg19:Y:14077221-C-A hg38:Y:11956515-C-A | ** | ||||||
hg19:Y:17503648-C-A hg38:Y:15391768-C-A | ** | ||||||
hg19:Y:21991478-C-A hg38:Y:19829592-C-A | ** | ||||||
hg19:Y:19466981-C-A hg38:Y:17355101-C-A | ** | ||||||
hg19:Y:5367842-G-T hg38:Y:5499801-G-T | FT55561 | ** | |||||
hg38:Y:11034588-T-G | ** | ||||||
hg38:Y:11034619-G-T | ** | ||||||
hg38:Y:11034624-G-A | FT440340 | ** | |||||
hg38:Y:11034635-A-G | ** | ||||||
hg38:Y:11034651-C-A | ** | ||||||
hg38:Y:11034659-CATTCCATTCTATTCAAA-C | ** | ||||||
hg38:Y:11034678-CGAT-C | ** | ||||||
hg19:Y:21550083-C-A hg38:Y:19388197-C-A | ** | ||||||
hg19:Y:8786775-A-C hg38:Y:8918734-A-C | ** | ||||||
hg38:Y:10940908-C-T | ** | ||||||
hg19:Y:7832264-ATTAT-A hg38:Y:7964223-ATTAT-A | 4×TTAT | ** | |||||
hg19:Y:18858534-C-A hg38:Y:16746654-C-A | ** | ||||||
hg38:Y:10683672-CTCCAT-C | ** | ||||||
hg19:Y:3116241-C-A hg38:Y:3248200-C-A | ** | ||||||
hg38:Y:10661024-C-A | ** | ||||||
hg19:Y:15980203-C-A hg38:Y:13868323-C-A | ** | ||||||
hg38:Y:10759392-C-A | ** | ||||||
hg38:Y:56842137-C-A | ** | ||||||
hg19:Y:22734392-G-T hg38:Y:20572506-G-T | ** | ||||||
hg38:Y:10979897-A-G | ** | ||||||
hg19:Y:17366850-G-T hg38:Y:15254970-G-T | ** | ||||||
hg19:Y:9774478-CTT-C hg38:Y:9936869-CTT-C | ** | ||||||
hg19:Y:13504693-C-A hg38:Y:11349017-C-A | ** | ||||||
hg19:Y:17794307-C-A hg38:Y:15682427-C-A | ** | ||||||
hg19:Y:27936766-A-AG hg38:Y:25790619-A-AG | P1_Y2 | ** | |||||
hg19:Y:14561784-C-A hg38:Y:12449985-C-A | ** | ||||||
hg19:Y:17019604-C-A hg38:Y:14907724-C-A | ** | ||||||
hg19:Y:16476210-T-G hg38:Y:14364330-T-G | ** | ||||||
hg38:Y:10979855-T-TGCCAC | ** | ||||||
hg19:Y:7166941-G-A hg38:Y:7298900-G-A | ** | ||||||
hg19:Y:2651979-C-A hg38:Y:2783938-C-A | ** | ||||||
hg38:Y:10961258-T-A | ** | ||||||
hg19:Y:16278650-C-A hg38:Y:14166770-C-A | ** | ||||||
hg19:Y:6693157-C-A hg38:Y:6825116-C-A | ** | ||||||
hg38:Y:10816116-C-T | ** | ||||||
hg38:Y:10842053-C-A | ** | ||||||
hg19:Y:3080585-C-A hg38:Y:3212544-C-A | ** | ||||||
hg19:Y:3345870-AT-A hg38:Y:3477829-AT-A | ** | ||||||
hg19:Y:22165107-G-A hg38:Y:20003221-G-A | FTB30329 | ** | |||||
hg19:Y:2773691-TAAAAAA-T hg38:Y:2905650-TAAAAAA-T | 19×A | ** | |||||
hg19:Y:2824480-C-A hg38:Y:2956439-C-A | ** | ||||||
hg19:Y:2881473-T-A hg38:Y:3013432-T-A | ** | ||||||
hg19:Y:3039714-G-T hg38:Y:3171673-G-T | ** | ||||||
hg19:Y:3184916-G-T hg38:Y:3316875-G-T | ** | ||||||
hg19:Y:3223247-C-A hg38:Y:3355206-C-A | ** | ||||||
hg19:Y:3223321-G-A hg38:Y:3355280-G-A | ** | ||||||
hg19:Y:3254685-G-T hg38:Y:3386644-G-T | ** | ||||||
hg19:Y:3695496-G-T hg38:Y:3827455-G-T | FT371474 | ** | |||||
hg19:Y:3782189-G-T hg38:Y:3914148-G-T | ** | ||||||
hg19:Y:3809013-G-A hg38:Y:3940972-G-A | ** | ||||||
hg19:Y:3928947-A-T hg38:Y:4060906-A-T | ** | ||||||
hg19:Y:3943279-T-C hg38:Y:4075238-T-C | ** | ||||||
hg19:Y:4020492-G-T hg38:Y:4152451-G-T | ** | ||||||
hg19:Y:4047830-G-T hg38:Y:4179789-G-T | ** | ||||||
hg19:Y:4059518-C-A hg38:Y:4191477-C-A | ** | ||||||
hg19:Y:4102097-T-C hg38:Y:4234056-T-C | ** | ||||||
hg19:Y:4255659-A-G hg38:Y:4387618-A-G | ** | ||||||
hg19:Y:4295745-A-G hg38:Y:4427704-A-G | ** | ||||||
hg19:Y:4339311-C-A hg38:Y:4471270-C-A | ** | ||||||
hg19:Y:4434479-G-T hg38:Y:4566438-G-T | ** | ||||||
hg19:Y:4438086-C-A hg38:Y:4570045-C-A | ** | ||||||
hg19:Y:4471521-G-T hg38:Y:4603480-G-T | ** | ||||||
hg19:Y:4567844-C-A hg38:Y:4699803-C-A | ** | ||||||
hg19:Y:4698099-GGGAA-G hg38:Y:4830058-GGGAA-G | ** | ||||||
hg19:Y:4712332-C-T hg38:Y:4844291-C-T | ** | ||||||
hg19:Y:4712548-C-A hg38:Y:4844507-C-A | ** | ||||||
hg19:Y:4929108-G-A hg38:Y:5061067-G-A | ** | ||||||
hg19:Y:4946720-A-G hg38:Y:5078679-A-G | ** | ||||||
hg19:Y:4953878-G-T hg38:Y:5085837-G-T | ** | ||||||
hg19:Y:5165382-G-T hg38:Y:5297341-G-T | ** | ||||||
hg19:Y:5308512-C-A hg38:Y:5440471-C-A | ** | ||||||
hg19:Y:5736179-A-C hg38:Y:5868138-A-C | ** | ||||||
hg19:Y:5882970-C-A hg38:Y:6014929-C-A | ** | ||||||
hg19:Y:5992518-G-A hg38:Y:6124477-G-A | FT159306 | ** | |||||
hg19:Y:6051997-C-A hg38:Y:6183956-C-A | ** | ||||||
hg19:Y:6052011-G-T hg38:Y:6183970-G-T | ** | ||||||
hg19:Y:6267778-GCA-G hg38:Y:6399737-GCA-G | IR3_Dst | ** | |||||
hg19:Y:6491245-C-A hg38:Y:6623204-C-A | ** | ||||||
hg19:Y:6506649-C-A hg38:Y:6638608-C-A | ** | ||||||
hg19:Y:6590343-G-A hg38:Y:6722302-G-A | ** | ||||||
hg19:Y:6616241-C-A hg38:Y:6748200-C-A | ** | ||||||
hg19:Y:6647025-T-G hg38:Y:6778984-T-G | ** | ||||||
hg19:Y:6780708-C-A hg38:Y:6912667-C-A | ** | ||||||
hg19:Y:7014722-A-G hg38:Y:7146681-A-G | ** | ||||||
hg19:Y:7033535-C-T hg38:Y:7165494-C-T | ** | ||||||
hg19:Y:7042665-G-T hg38:Y:7174624-G-T | ** | ||||||
hg19:Y:7113118-C-A hg38:Y:7245077-C-A | ** | ||||||
hg19:Y:7117160-G-A hg38:Y:7249119-G-A | ** | ||||||
hg19:Y:7134739-TA-T hg38:Y:7266698-TA-T | ** | ||||||
hg19:Y:7256958-C-G hg38:Y:7388917-C-G | ** | ||||||
hg19:Y:7256962-G-T hg38:Y:7388921-G-T | ** | ||||||
hg19:Y:8216442-T-C hg38:Y:8348401-T-C | ** | ||||||
hg19:Y:8279165-C-T hg38:Y:8411124-C-T | ** | ||||||
hg19:Y:8345751-G-T hg38:Y:8477710-G-T | ** | ||||||
hg19:Y:8977064-G-T hg38:Y:9139455-G-T | ** | ||||||
hg19:Y:8981179-A-G hg38:Y:9143570-A-G | ** | ||||||
hg19:Y:9030284-A-C hg38:Y:9192675-A-C | ** | ||||||
hg19:Y:9237706-C-A hg38:Y:9400097-C-A | ** | ||||||
hg19:Y:9519883-T-G hg38:Y:9682274-T-G | ** | ||||||
hg19:Y:9820572-A-AC hg38:Y:9982963-A-AC | ** | ||||||
hg19:Y:9911180-G-T hg38:Y:10073571-G-T | ** | ||||||
hg19:Y:9919718-C-A hg38:Y:10082109-C-A | ** | ||||||
hg19:Y:9979137-A-G hg38:Y:10141528-A-G | ** | ||||||
hg19:Y:10028562-G-A hg38:Y:10190953-G-A | ** | ||||||
hg19:Y:10050284-TTCTGTCTA-T hg38:Y:10212675-TTCTGTCTA-T | ** | ||||||
hg38:Y:10655932-T-A | ** | ||||||
hg38:Y:10655947-T-C | ** | ||||||
hg38:Y:10665197-G-T | ** | ||||||
hg38:Y:10671591-A-G | ** | ||||||
hg38:Y:10671593-T-C | ** | ||||||
hg38:Y:10671594-A-T | ** | ||||||
hg38:Y:10671614-A-T | ** | ||||||
hg38:Y:10687777-T-C | ** | ||||||
hg38:Y:10746682-A-G | ** | ||||||
hg38:Y:10757827-T-G | ** | ||||||
hg38:Y:10758315-G-T | ** | ||||||
hg38:Y:10761732-C-A | ** | ||||||
hg38:Y:10767771-C-A | ** | ||||||
hg38:Y:10781279-T-A | ** | ||||||
hg38:Y:10805175-C-A | ** | ||||||
hg38:Y:10809576-T-TTTAATTCAAA | ** | ||||||
hg38:Y:10820960-C-G | ** | ||||||
hg38:Y:10837918-C-A | ** | ||||||
hg38:Y:10838939-C-T | ** | ||||||
hg38:Y:10848694-T-C | ** | ||||||
hg38:Y:10894256-C-A | ** | ||||||
hg38:Y:10898509-C-T | ** | ||||||
hg38:Y:10903023-C-A | ** | ||||||
hg38:Y:10905198-G-A | ** | ||||||
hg38:Y:10908299-C-A | ** | ||||||
hg38:Y:10918849-G-T | ** | ||||||
hg38:Y:10920491-A-T | ** | ||||||
hg38:Y:10927994-C-T | ** | ||||||
hg38:Y:10931479-C-A | ** | ||||||
hg38:Y:10931534-C-A | ** | ||||||
hg38:Y:10959896-A-G | ** | ||||||
hg38:Y:10968984-A-T | ** | ||||||
hg38:Y:10976264-C-T | ** | ||||||
hg38:Y:10977015-C-A | ** | ||||||
hg38:Y:10979894-T-C | ** | ||||||
hg38:Y:10982166-C-A | ** | ||||||
hg38:Y:10989395-A-T | ** | ||||||
hg38:Y:10989398-C-G | ** | ||||||
hg38:Y:10989441-A-G | ** | ||||||
hg38:Y:10997191-T-G | ** | ||||||
hg38:Y:10997437-C-A | ** | ||||||
hg38:Y:11007807-C-A | ** | ||||||
hg38:Y:11018982-C-A | ** | ||||||
hg38:Y:11024768-C-A | ** | ||||||
hg38:Y:11026501-C-A | ** | ||||||
hg19:Y:13333444-C-A hg38:Y:11177768-C-A | ** | ||||||
hg19:Y:13484489-A-G hg38:Y:11328813-A-G | ** | ||||||
hg19:Y:13484780-A-T hg38:Y:11329104-A-T | ** | ||||||
hg19:Y:13499767-G-T hg38:Y:11344091-G-T | ** | ||||||
hg19:Y:13585215-C-T hg38:Y:11429539-C-T | ** | ||||||
hg19:Y:13592661-C-T hg38:Y:11436985-C-T | ** | ||||||
hg38:Y:11644822-C-G | DYZ17 | ** | |||||
hg38:Y:11644829-A-T | DYZ17 | ** | |||||
hg38:Y:11653164-A-G | DYZ17 | ** | |||||
hg38:Y:11659822-G-A | DYZ17 | ** | |||||
hg38:Y:11662613-G-T | DYZ17 | ** | |||||
hg38:Y:11667221-A-G | DYZ17 | ** | |||||
hg19:Y:13858204-G-T hg38:Y:11737498-G-T | DYZ17 | ** | |||||
hg19:Y:13898916-A-C hg38:Y:11778210-A-C | ** | ||||||
hg19:Y:13898918-T-C hg38:Y:11778212-T-C | ** | ||||||
hg19:Y:13909928-C-A hg38:Y:11789222-C-A | ** | ||||||
hg19:Y:13910154-C-G hg38:Y:11789448-C-G | ** | ||||||
hg19:Y:14162085-A-G hg38:Y:12041379-A-G | ** | ||||||
hg19:Y:14352114-G-A hg38:Y:12231409-G-A | ** | ||||||
hg19:Y:14527753-C-T hg38:Y:12415954-C-T | ** | ||||||
hg19:Y:14585230-G-T hg38:Y:12473430-G-T | ** | ||||||
hg19:Y:14619541-C-A hg38:Y:12507739-C-A | ** | ||||||
hg19:Y:14623569-C-T hg38:Y:12511767-C-T | ** | ||||||
hg19:Y:14623577-T-G hg38:Y:12511775-T-G | ** | ||||||
hg19:Y:14695963-A-C hg38:Y:12584029-A-C | ** | ||||||
hg19:Y:14696008-A-AC hg38:Y:12584074-A-AC | ** | ||||||
hg19:Y:14755465-A-C hg38:Y:12643534-A-C | ** | ||||||
hg19:Y:14793872-C-A hg38:Y:12681943-C-A | ** | ||||||
hg19:Y:15369127-C-A hg38:Y:13257247-C-A | ** | ||||||
hg19:Y:15480335-C-A hg38:Y:13368455-C-A | ** | ||||||
hg19:Y:15579517-C-T hg38:Y:13467637-C-T | ** | ||||||
hg19:Y:15622226-C-A hg38:Y:13510346-C-A | ** | ||||||
hg19:Y:15843134-C-A hg38:Y:13731254-C-A | ** | ||||||
hg19:Y:16008181-A-G hg38:Y:13896301-A-G | ** | ||||||
hg19:Y:16270650-G-T hg38:Y:14158770-G-T | ** | ||||||
hg19:Y:16319414-G-T hg38:Y:14207534-G-T | ** | ||||||
hg19:Y:16355221-A-G hg38:Y:14243341-A-G | ** | ||||||
hg19:Y:16536141-A-G hg38:Y:14424261-A-G | ** | ||||||
hg19:Y:16588516-C-A hg38:Y:14476636-C-A | ** | ||||||
hg19:Y:16681473-C-A hg38:Y:14569593-C-A | ** | ||||||
hg19:Y:17218213-C-A hg38:Y:15106333-C-A | ** | ||||||
hg19:Y:17222626-G-T hg38:Y:15110746-G-T | ** | ||||||
hg19:Y:17250805-G-A hg38:Y:15138925-G-A | ** | ||||||
hg19:Y:17375298-G-C hg38:Y:15263418-G-C | ** | ||||||
hg19:Y:17504960-A-T hg38:Y:15393080-A-T | ** | ||||||
hg19:Y:17885672-C-A hg38:Y:15773792-C-A | ** | ||||||
hg19:Y:17918645-G-T hg38:Y:15806765-G-T | ** | ||||||
hg19:Y:18134297-C-A hg38:Y:16022417-C-A | ** | ||||||
hg19:Y:18166203-G-T hg38:Y:16054323-G-T | ** | ||||||
hg19:Y:18454876-T-G hg38:Y:16342996-T-G | P6_Dst | ** | |||||
hg19:Y:18462706-G-C hg38:Y:16350826-G-C | P6_Dst | ** | |||||
hg19:Y:18471775-A-G hg38:Y:16359895-A-G | P6_Dst | ** | |||||
hg19:Y:18767219-C-T hg38:Y:16655339-C-T | ** | ||||||
hg19:Y:18767224-A-T hg38:Y:16655344-A-T | ** | ||||||
hg19:Y:18892381-C-A hg38:Y:16780501-C-A | ** | ||||||
hg19:Y:18932846-A-G hg38:Y:16820966-A-G | ** | ||||||
hg19:Y:18994578-G-A hg38:Y:16882698-G-A | ** | ||||||
hg19:Y:18994579-A-G hg38:Y:16882699-A-G | ** | ||||||
hg19:Y:19058100-C-A hg38:Y:16946220-C-A | ** | ||||||
hg19:Y:19187447-T-TC hg38:Y:17075567-T-TC | ** | ||||||
hg19:Y:19417286-C-A hg38:Y:17305406-C-A | ** | ||||||
hg19:Y:19464035-G-T hg38:Y:17352155-G-T | ** | ||||||
hg19:Y:19520888-C-A hg38:Y:17409008-C-A | ** | ||||||
hg19:Y:19591944-A-AATAT hg38:Y:17480064-A-AATAT | P5_Prx | 10×AT | ** | ||||
hg19:Y:20265320-TCA-T hg38:Y:18103434-TCA-T | P5_Dst | ** | |||||
hg19:Y:21055205-C-A hg38:Y:18893319-C-A | ** | ||||||
hg19:Y:21091002-C-A hg38:Y:18929116-C-A | ** | ||||||
hg19:Y:21187319-C-A hg38:Y:19025433-C-A | ** | ||||||
hg19:Y:21265318-T-C hg38:Y:19103432-T-C | ** | ||||||
hg19:Y:21457427-C-T hg38:Y:19295541-C-T | ** | ||||||
hg19:Y:21514003-T-C hg38:Y:19352117-T-C | ** | ||||||
hg19:Y:21653823-C-A hg38:Y:19491937-C-A | ** | ||||||
hg19:Y:21671674-C-A hg38:Y:19509788-C-A | ** | ||||||
hg19:Y:21886718-CA-C hg38:Y:19724832-CA-C | ** | ||||||
hg19:Y:22001332-T-G hg38:Y:19839446-T-G | ** | ||||||
hg19:Y:22080648-G-T hg38:Y:19918762-G-T | ** | ||||||
hg19:Y:22211921-C-A hg38:Y:20050035-C-A | ** | ||||||
hg19:Y:22513237-C-A hg38:Y:20351351-C-A | ** | ||||||
hg19:Y:22537604-TTAAAAAATAAGAAATTAAA-T hg38:Y:20375718-TTAAAAAATAAGAAATTAAA-T | ** | ||||||
hg19:Y:22804141-C-A hg38:Y:20642255-C-A | ** | ||||||
hg19:Y:22843806-C-T hg38:Y:20681920-C-T | ** | ||||||
hg19:Y:22914532-C-A hg38:Y:20752646-C-A | ** | ||||||
hg19:Y:23046072-A-C hg38:Y:20884186-A-C | ** | ||||||
hg19:Y:23340162-C-A hg38:Y:21178276-C-A | ** | ||||||
hg19:Y:23640052-A-G hg38:Y:21478166-A-G | ** | ||||||
hg19:Y:23831299-C-A hg38:Y:21669413-C-A | ** | ||||||
hg19:Y:23837575-G-T hg38:Y:21675689-G-T | ** | ||||||
hg19:Y:24115243-C-A hg38:Y:21969096-C-A | P3_b1 | ** | |||||
hg19:Y:24266598-T-G hg38:Y:22120451-T-G | P3_b1 | ** | |||||
hg19:Y:24540300-A-AG hg38:Y:22394153-A-AG | P3_t2 | ** | |||||
hg19:Y:26366532-G-T hg38:Y:24220385-G-T | P1_Y1 | ** | |||||
hg19:Y:27958476-C-T hg38:Y:25812329-C-T | P1_Y2 | ** | |||||
hg19:Y:27971761-AC-A hg38:Y:25825614-AC-A | P1_Y2 | ** | |||||
hg19:Y:28655563-C-A hg38:Y:26509416-C-A | ** | ||||||
hg38:Y:56824583-G-T | ** | ||||||
hg19:Y:58848117-G-T hg38:Y:56742754-C-A | *** | ||||||
hg19:Y:5073563-A-AAT hg38:Y:5205522-A-AAT | *** | ||||||
hg19:Y:58978201-A-C hg38:Y:56832054-A-C | *** | ||||||
hg19:Y:16772435-ATT-A hg38:Y:14660555-ATT-A | 17×T | *** | |||||
hg19:Y:18965642-CTTTTTT-C hg38:Y:16853762-CTTTTTT-C | 19×T | *** | |||||
hg19:Y:9836888-GTTTTT-G hg38:Y:9999279-GTTTTT-G | 20×T | *** | |||||
hg38:Y:10896318-C-CGGATG | *** | ||||||
hg19:Y:19129053-CTTTT-C hg38:Y:17017173-CTTTT-C | 16×T | *** | |||||
hg19:Y:23540607-TA-T hg38:Y:21378721-TA-T | 9×A | *** | |||||
hg38:Y:10825273-TG-T | *** | ||||||
hg19:Y:14642670-C-CT hg38:Y:12530739-C-CT | 10×T | *** | |||||
hg38:Y:10796585-T-A | *** | ||||||
hg38:Y:10796571-A-C | *** | ||||||
hg38:Y:10796582-A-C | *** | ||||||
hg38:Y:10796588-A-G | *** | ||||||
hg38:Y:10796589-A-G | *** | ||||||
hg38:Y:10796596-T-G | *** | ||||||
hg38:Y:10796605-C-A | *** | ||||||
hg38:Y:10796607-G-T | *** | ||||||
hg19:Y:14847004-CA-C,CAA hg38:Y:12735070-CA-C,CAA | 20×A | *** | |||||
hg38:Y:56846948-G-T | *** | ||||||
hg38:Y:10922175-CCTCAT-C | *** | ||||||
hg19:Y:23498080-AT-A,ATT hg38:Y:21336194-AT-A,ATT | 19×T | *** | |||||
hg38:Y:10942886-T-C | *** | ||||||
hg38:Y:11016086-C-A | *** | ||||||
hg38:Y:10654253-C-A | *** | ||||||
hg19:Y:3271601-C-CTT hg38:Y:3403560-C-CTT | 14×T | *** | |||||
hg19:Y:23597652-C-A hg38:Y:21435766-C-A | *** | ||||||
hg19:Y:16680691-C-A hg38:Y:14568811-C-A | *** | ||||||
hg38:Y:10997720-A-G | *** | ||||||
hg38:Y:10997724-C-G | *** | ||||||
hg19:Y:23188675-C-A hg38:Y:21026789-C-A | *** | ||||||
hg38:Y:56842834-T-A | *** | ||||||
hg19:Y:9426905-C-A hg38:Y:9589296-C-A | *** | ||||||
hg19:Y:14181487-G-T hg38:Y:12060781-G-T | *** | ||||||
hg19:Y:23196210-C-A hg38:Y:21034324-C-A | *** | ||||||
hg19:Y:13487788-C-T hg38:Y:11332112-C-T | *** | ||||||
hg19:Y:2773722-G-T hg38:Y:2905681-G-T | *** | ||||||
hg19:Y:15686927-C-A hg38:Y:13575047-C-A | *** | ||||||
hg19:Y:18600818-C-A hg38:Y:16488938-C-A | *** | ||||||
hg19:Y:3131139-C-A hg38:Y:3263098-C-A | *** | ||||||
hg38:Y:10898217-C-A | *** | ||||||
hg19:Y:19061309-C-A hg38:Y:16949429-C-A | *** | ||||||
hg19:Y:10019972-C-A hg38:Y:10182363-C-A | *** | ||||||
hg19:Y:15495770-TA-T hg38:Y:13383890-TA-T | 8×A | *** | |||||
hg38:Y:10892568-C-G | *** | ||||||
hg38:Y:10653609-C-T | *** | ||||||
hg19:Y:5199775-G-A hg38:Y:5331734-G-A | *** | ||||||
hg19:Y:5214247-C-A hg38:Y:5346206-C-A | *** | ||||||
hg19:Y:6874849-C-T hg38:Y:7006808-C-T | *** | ||||||
hg19:Y:7038657-C-A hg38:Y:7170616-C-A | *** | ||||||
hg19:Y:7537728-G-T hg38:Y:7669687-G-T | *** | ||||||
hg19:Y:8668190-G-T hg38:Y:8800149-G-T | *** | ||||||
hg19:Y:8835118-C-A hg38:Y:8967077-C-A | *** | ||||||
hg19:Y:9859055-G-T hg38:Y:10021446-G-T | *** | ||||||
hg38:Y:10671599-C-G | *** | ||||||
hg38:Y:10788822-C-A | *** | ||||||
hg38:Y:10788864-G-T | *** | ||||||
hg38:Y:10855967-C-A | *** | ||||||
hg38:Y:10908007-G-T | *** | ||||||
hg19:Y:13236556-T-C hg38:Y:11080880-T-C | *** | ||||||
hg19:Y:14098654-C-A hg38:Y:11977948-C-A | *** | ||||||
hg19:Y:14470874-C-A hg38:Y:12350143-C-A | *** | ||||||
hg19:Y:15057731-ATGTCTAATTTTTTTTTTTTTTTTT-A,ATGTCTAATTTTTTTTTTTTTTT hg38:Y:12945823-ATGTCTAATTTTTTTTTTTTTTTTT-A,ATGTCTAATTTTTTTTTTTTTTT | *** | ||||||
hg19:Y:15130570-C-A hg38:Y:13018657-C-A | *** | ||||||
hg19:Y:15404066-C-A hg38:Y:13292186-C-A | *** | ||||||
hg19:Y:16051167-C-A hg38:Y:13939287-C-A | *** | ||||||
hg19:Y:16309571-CAAA-C,CAAAA hg38:Y:14197691-CAAA-C,CAAAA | 17×A | *** | |||||
hg19:Y:17136498-G-A hg38:Y:15024618-G-A | *** | ||||||
hg19:Y:17545805-C-A hg38:Y:15433925-C-A | *** | ||||||
hg19:Y:18174761-G-T hg38:Y:16062881-G-T | *** | ||||||
hg19:Y:18425119-C-A hg38:Y:16313239-C-A | P6_Gap | *** | |||||
hg19:Y:19143138-TTTTTGAGACA-T,TTTGAGACA hg38:Y:17031258-TTTTTGAGACA-T,TTTGAGACA | *** | ||||||
hg19:Y:19361083-C-A hg38:Y:17249203-C-A | *** | ||||||
hg19:Y:21354468-C-A hg38:Y:19192582-C-A | *** | ||||||
hg19:Y:21625193-C-A hg38:Y:19463307-C-A | *** | ||||||
hg19:Y:22980801-C-A hg38:Y:20818915-C-A | *** | ||||||
hg19:Y:24503109-A-G hg38:Y:22356962-A-G | *** | ||||||
hg38:Y:56842063-T-C | *** | ||||||
hg38:Y:56842817-A-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 253758 | 9343875 | 7615904 | 7524414 |
Used in age calculations | 9343875 | 7615904 | 7524414 |
Counts of SNPs | 6 | 6 |
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