Lewis
BigY2: N46299MDKA Birth:
EnglandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 N46299 |
|---|---|---|---|---|---|---|---|
| hg19:Y:13447466-C-T hg38:Y:11291790-C-T | A* | ||||||
| hg19:Y:8183587-G-GT hg38:Y:8315546-G-GT | 10×T | A* | |||||
| hg19:Y:7618879-A-G hg38:Y:7750838-A-G | BY66323 | Y | Y | + | |||
| hg19:Y:23629986-G-A hg38:Y:21468100-G-A | BY146855 | Y | Y | + | |||
| hg19:Y:14102794-G-GTCTATCTA hg38:Y:11982088-G-GTCTATCTA | BY33480 | 11×TCTA | * | ||||
| hg19:Y:13449764-TATTCCATTCT-T,TATTCCATTAC hg38:Y:11294088-TATTCCATTCT-T,TATTCCATTAC | * | ||||||
| hg19:Y:23377534-TA-T hg38:Y:21215648-TA-T | 9×A | ** | |||||
| hg19:Y:58985607-G-T hg38:Y:56839460-G-T | ** | ||||||
| hg19:Y:2960027-G-A hg38:Y:3091986-G-A | FT315561 | ** | |||||
| hg19:Y:28711550-G-A hg38:Y:26565403-G-A | ** | ||||||
| hg19:Y:14592230-C-A hg38:Y:12480430-C-A | ** | ||||||
| hg19:Y:14879852-C-A hg38:Y:12767922-C-A | Z2042 | ** | |||||
| hg19:Y:21368207-A-G hg38:Y:19206321-A-G | Z18318 | 10×TTATG | ** | ||||
| hg19:Y:6751568-C-A hg38:Y:6883527-C-A | ** | ||||||
| hg19:Y:28812872-G-A hg38:Y:26666725-G-A | ** | ||||||
| hg19:Y:15173666-G-C hg38:Y:13061752-G-C | ** | ||||||
| hg19:Y:13471961-G-A hg38:Y:11316285-G-A | ** | ||||||
| hg19:Y:13460606-C-A hg38:Y:11304930-C-A | ** | ||||||
| hg19:Y:6697158-G-T hg38:Y:6829117-G-T | ** | ||||||
| hg19:Y:14148014-AAAAT-A hg38:Y:12027308-AAAAT-A | 8×AAAT | ** | |||||
| hg19:Y:17367856-C-A hg38:Y:15255976-C-A | ** | ||||||
| hg38:Y:10997756-A-T | ** | ||||||
| hg38:Y:10997761-T-C | ** | ||||||
| hg38:Y:10997762-T-C | ** | ||||||
| hg38:Y:10967523-C-A | ** | ||||||
| hg38:Y:10796808-T-A | ** | ||||||
| hg19:Y:23875716-C-A hg38:Y:21713830-C-A | ** | ||||||
| hg19:Y:13460659-C-G hg38:Y:11304983-C-G | ** | ||||||
| hg19:Y:13487812-C-T hg38:Y:11332136-C-T | ** | ||||||
| hg19:Y:18189988-G-T hg38:Y:16078108-G-T | ** | ||||||
| hg38:Y:10956608-C-T | ** | ||||||
| hg19:Y:15189790-C-A hg38:Y:13077876-C-A | ** | ||||||
| hg19:Y:20252864-G-T hg38:Y:18090978-G-T | P5_Dst | ** | |||||
| hg19:Y:14033997-C-A hg38:Y:11913291-C-A | ** | ||||||
| hg19:Y:17503547-C-A hg38:Y:15391667-C-A | ** | ||||||
| hg38:Y:10925476-C-T | ** | ||||||
| hg19:Y:2909579-C-A hg38:Y:3041538-C-A | ** | ||||||
| hg38:Y:10808988-C-A | ** | ||||||
| hg38:Y:10934690-C-G | ** | ||||||
| hg38:Y:10934694-T-A | ** | ||||||
| hg38:Y:10934704-T-A | ** | ||||||
| hg38:Y:10808963-A-C | ** | ||||||
| hg19:Y:2669059-C-A hg38:Y:2801018-C-A | ** | ||||||
| hg38:Y:10673387-C-A | ** | ||||||
| hg38:Y:10807054-A-ACTCCT | ** | ||||||
| hg19:Y:14444902-C-A hg38:Y:12324175-C-A | ** | ||||||
| hg19:Y:18480357-T-A hg38:Y:16368477-T-A | P6_Dst | ** | |||||
| hg19:Y:13973248-C-A hg38:Y:11852542-C-A | ** | ||||||
| hg19:Y:23062736-C-A hg38:Y:20900850-C-A | ** | ||||||
| hg19:Y:22634807-C-A hg38:Y:20472921-C-A | ** | ||||||
| hg38:Y:11022138-T-G | ** | ||||||
| hg19:Y:24961235-C-A hg38:Y:22815088-C-A | g1 | ** | |||||
| hg19:Y:15987270-C-A hg38:Y:13875390-C-A | ** | ||||||
| hg38:Y:10826998-G-C | ** | ||||||
| hg38:Y:10827011-G-C | ** | ||||||
| hg38:Y:10827036-T-C | ** | ||||||
| hg19:Y:28801423-G-A hg38:Y:26655276-G-A | ** | ||||||
| hg38:Y:10692307-A-C | ** | ||||||
| hg19:Y:7338235-C-A hg38:Y:7470194-C-A | ** | ||||||
| hg19:Y:26236337-T-G hg38:Y:24090190-T-G | P1_Y1 | ** | |||||
| hg19:Y:2696509-C-A hg38:Y:2828468-C-A | ** | ||||||
| hg38:Y:56839461-T-TA | ** | ||||||
| hg38:Y:10760242-C-T | ** | ||||||
| hg19:Y:7451243-C-CA hg38:Y:7583202-C-CA | IR1_L | 10×A | ** | ||||
| hg19:Y:13471952-C-T hg38:Y:11316276-C-T | ** | ||||||
| hg19:Y:8736916-A-C hg38:Y:8868875-A-C | ** | ||||||
| hg38:Y:10818728-C-T | ** | ||||||
| hg38:Y:10818752-A-G | ** | ||||||
| hg38:Y:11035635-T-A | ** | ||||||
| hg38:Y:11035638-A-T | ** | ||||||
| hg38:Y:11035653-C-T | ** | ||||||
| hg19:Y:13471932-C-A hg38:Y:11316256-C-A | ** | ||||||
| hg38:Y:10763332-TTTCC-T | ** | ||||||
| hg38:Y:10827022-A-T | ** | ||||||
| hg38:Y:10770910-C-T | ** | ||||||
| hg38:Y:11022055-C-G | ** | ||||||
| hg38:Y:10793997-T-C | ** | ||||||
| hg38:Y:10793998-C-T | ** | ||||||
| hg19:Y:16479854-C-A hg38:Y:14367974-C-A | ** | ||||||
| hg38:Y:10770929-T-C | ** | ||||||
| hg38:Y:10770931-G-T | ** | ||||||
| hg38:Y:10770937-C-T | ** | ||||||
| hg38:Y:10770976-C-G | ** | ||||||
| hg38:Y:10818737-A-T | ** | ||||||
| hg38:Y:10818745-G-C | ** | ||||||
| hg38:Y:10818751-C-T | ** | ||||||
| hg38:Y2:16064-T-G | ** | ||||||
| hg38:Y:56839455-C-G | ** | ||||||
| hg38:Y:10760237-T-A | ** | ||||||
| hg19:Y:22010292-C-A hg38:Y:19848406-C-A | ** | ||||||
| hg38:Y:10818682-A-C | ** | ||||||
| hg38:Y:10818687-A-T | ** | ||||||
| hg19:Y:22244083-G-A hg38:Y:20082197-G-A | DYZ19 | ** | |||||
| hg38:Y:10857471-G-T | ** | ||||||
| hg19:Y:13460633-G-A hg38:Y:11304957-G-A | ** | ||||||
| hg38:Y:10796801-C-T | ** | ||||||
| hg38:Y:10796806-C-T | ** | ||||||
| hg38:Y:10796854-C-T | ** | ||||||
| hg38:Y:10796855-T-G | ** | ||||||
| hg38:Y:10796856-C-G | ** | ||||||
| hg19:Y:4957538-C-A hg38:Y:5089497-C-A | ** | ||||||
| hg19:Y:13475546-C-A hg38:Y:11319870-C-A | ** | ||||||
| hg38:Y:10997726-T-C | ** | ||||||
| hg19:Y:15132024-C-A hg38:Y:13020111-C-A | ** | ||||||
| hg19:Y:23466418-G-T hg38:Y:21304532-G-T | ** | ||||||
| hg19:Y:14444893-C-A hg38:Y:12324166-C-A | ** | ||||||
| hg38:Y:10827001-T-G | ** | ||||||
| hg38:Y:10827006-G-T | ** | ||||||
| hg38:Y:10827009-C-T | ** | ||||||
| hg38:Y:10827021-C-G | ** | ||||||
| hg38:Y:10827040-ACTCTG-A | ** | ||||||
| hg38:Y:10827059-C-G | ** | ||||||
| hg19:Y:28234350-C-A hg38:Y:26088203-C-A | P1_b4 | ** | |||||
| hg38:Y:10800962-A-C | ** | ||||||
| hg38:Y:10800964-C-G | ** | ||||||
| hg38:Y:10967546-T-A | ** | ||||||
| hg19:Y:7188376-C-A hg38:Y:7320335-C-A | ** | ||||||
| hg38:Y:10796648-A-T | ** | ||||||
| hg19:Y:6238668-CA-C hg38:Y:6370627-CA-C | IR3_Dst | ** | |||||
| hg38:Y:10942726-CT-C | ** | ||||||
| hg38:Y:10818716-C-T | ** | ||||||
| hg38:Y:10818717-A-G | ** | ||||||
| hg38:Y:10818723-C-T | ** | ||||||
| hg19:Y:16607573-C-A hg38:Y:14495693-C-A | ** | ||||||
| hg19:Y:18871831-C-A hg38:Y:16759951-C-A | ** | ||||||
| hg38:Y:10770966-A-C | ** | ||||||
| hg19:Y:13620670-C-A hg38:Y:11464994-C-A | ** | ||||||
| hg38:Y:10922319-C-A | ** | ||||||
| hg38:Y:10652647-G-T | ** | ||||||
| hg19:Y:17560523-C-A hg38:Y:15448643-C-A | ** | ||||||
| hg19:Y:18611646-T-TA hg38:Y:16499766-T-TA | 9×A | ** | |||||
| hg19:Y:18328848-C-A hg38:Y:16216968-C-A | P6_Prx | ** | |||||
| hg19:Y:18631838-C-A hg38:Y:16519958-C-A | ** | ||||||
| hg19:Y:19706651-TCAC-T hg38:Y:17594771-TCAC-T | P5_Prx | 6×CAC | ** | ||||
| hg19:Y:15832308-C-A hg38:Y:13720428-C-A | ** | ||||||
| hg19:Y:6757236-C-A hg38:Y:6889195-C-A | ** | ||||||
| hg19:Y:15070613-TCA-T hg38:Y:12958704-TCA-T | ** | ||||||
| hg19:Y:21371559-C-A hg38:Y:19209673-C-A | ** | ||||||
| hg19:Y:17306299-C-A hg38:Y:15194419-C-A | ** | ||||||
| hg19:Y:4241723-C-A hg38:Y:4373682-C-A | ** | ||||||
| hg38:Y:10967545-T-C | ** | ||||||
| hg19:Y:13463922-C-T hg38:Y:11308246-C-T | ** | ||||||
| hg38:Y:56849601-C-A | ** | ||||||
| hg19:Y:3834746-C-A hg38:Y:3966705-C-A | ** | ||||||
| hg19:Y:22903771-C-A hg38:Y:20741885-C-A | ** | ||||||
| hg19:Y:7041758-C-A hg38:Y:7173717-C-A | ** | ||||||
| hg19:Y:13463925-G-A hg38:Y:11308249-G-A | ** | ||||||
| hg38:Y:10827065-T-A | ** | ||||||
| hg19:Y:23845014-G-T hg38:Y:21683128-G-T | ** | ||||||
| hg38:Y:10997789-C-T | ** | ||||||
| hg19:Y:17735188-C-A hg38:Y:15623308-C-A | ** | ||||||
| hg19:Y:21954475-C-A hg38:Y:19792589-C-A | ** | ||||||
| hg19:Y:17313480-C-A hg38:Y:15201600-C-A | ** | ||||||
| hg19:Y:20409756-A-C hg38:Y:18247870-A-C | P5_Dst | ** | |||||
| hg19:Y:13461801-G-T hg38:Y:11306125-G-T | ** | ||||||
| hg19:Y:13461806-C-T hg38:Y:11306130-C-T | ** | ||||||
| hg19:Y:18050207-C-A hg38:Y:15938327-C-A | ** | ||||||
| hg38:Y:10826967-G-T | ** | ||||||
| hg38:Y:10967565-T-G | ** | ||||||
| hg38:Y:10808973-C-T | ** | ||||||
| hg19:Y:13460602-C-T hg38:Y:11304926-C-T | ** | ||||||
| hg19:Y:22132418-C-A hg38:Y:19970532-C-A | ** | ||||||
| hg19:Y:22366196-C-A hg38:Y:20204310-C-A | DYZ19 | ** | |||||
| hg19:Y:22366197-A-G hg38:Y:20204311-A-G | DYZ19 | ** | |||||
| hg19:Y:3991945-AACAC-A hg38:Y:4123904-AACAC-A | 12×AC | ** | |||||
| hg38:Y:10768086-T-A | ** | ||||||
| hg19:Y:15221377-C-A hg38:Y:13109463-C-A | ** | ||||||
| hg19:Y:7153032-C-A hg38:Y:7284991-C-A | ** | ||||||
| hg38:Y:11653621-C-A | DYZ17 | ** | |||||
| hg19:Y:19394203-C-A hg38:Y:17282323-C-A | ** | ||||||
| hg19:Y:28008318-G-T hg38:Y:25862171-G-T | P1_Y2 | ** | |||||
| hg19:Y:14147091-C-A hg38:Y:12026385-C-A | ** | ||||||
| hg19:Y:17737434-C-A hg38:Y:15625554-C-A | ** | ||||||
| hg38:Y:10804775-C-T | ** | ||||||
| hg19:Y:13255087-C-G hg38:Y:11099411-C-G | ** | ||||||
| hg19:Y:20322185-T-TG hg38:Y:18160299-T-TG | P5_Dst | ** | |||||
| hg38:Y:10951051-AACTGC-A | ** | ||||||
| hg38:Y:10951085-C-G | ** | ||||||
| hg38:Y:10951112-A-G | ** | ||||||
| hg38:Y:10951120-A-G | ** | ||||||
| hg38:Y:10951128-T-C | ** | ||||||
| hg38:Y:10997727-T-C | ** | ||||||
| hg38:Y:10997737-T-TCCACC | ** | ||||||
| hg19:Y:17158546-T-C hg38:Y:15046666-T-C | ** | ||||||
| hg19:Y:5214108-C-A hg38:Y:5346067-C-A | ** | ||||||
| hg19:Y:22855074-G-T hg38:Y:20693188-G-T | ** | ||||||
| hg19:Y:27030364-C-A hg38:Y:24884217-C-A | P1_r4 | ** | |||||
| hg38:Y:11031670-C-T | ** | ||||||
| hg38:Y:11031690-C-A | ** | ||||||
| hg19:Y:17146571-T-A hg38:Y:15034691-T-A | ** | ||||||
| hg19:Y:8835195-C-A hg38:Y:8967154-C-A | ** | ||||||
| hg19:Y:15769163-C-A hg38:Y:13657283-C-A | ** | ||||||
| hg19:Y:14194752-C-A hg38:Y:12074046-C-A | ** | ||||||
| hg19:Y:14325062-C-A hg38:Y:12204356-C-A | ** | ||||||
| hg19:Y:19382324-TTAC-T hg38:Y:17270444-TTAC-T | ** | ||||||
| hg19:Y:2668958-G-A hg38:Y:2800917-G-A | ** | ||||||
| hg19:Y:2701392-T-G hg38:Y:2833351-T-G | ** | ||||||
| hg19:Y:2791317-T-C hg38:Y:2923276-T-C | ** | ||||||
| hg19:Y:2805528-TCAA-T hg38:Y:2937487-TCAA-T | ** | ||||||
| hg19:Y:2818242-C-A hg38:Y:2950201-C-A | ** | ||||||
| hg19:Y:2907150-T-A hg38:Y:3039109-T-A | ** | ||||||
| hg19:Y:3105521-G-T hg38:Y:3237480-G-T | ** | ||||||
| hg19:Y:3105609-G-T hg38:Y:3237568-G-T | ** | ||||||
| hg19:Y:3409900-C-A hg38:Y:3541859-C-A | ** | ||||||
| hg19:Y:3496382-C-A hg38:Y:3628341-C-A | ** | ||||||
| hg19:Y:3754044-C-A hg38:Y:3886003-C-A | ** | ||||||
| hg19:Y:3983248-G-T hg38:Y:4115207-G-T | ** | ||||||
| hg19:Y:4196061-C-A hg38:Y:4328020-C-A | ** | ||||||
| hg19:Y:4293402-C-A hg38:Y:4425361-C-A | ** | ||||||
| hg19:Y:4365374-C-A hg38:Y:4497333-C-A | ** | ||||||
| hg19:Y:4552780-G-A hg38:Y:4684739-G-A | FT108805 | ** | |||||
| hg19:Y:4725494-T-G hg38:Y:4857453-T-G | ** | ||||||
| hg19:Y:4766390-G-T hg38:Y:4898349-G-T | ** | ||||||
| hg19:Y:4867655-C-A hg38:Y:4999614-C-A | ** | ||||||
| hg19:Y:5154108-G-T hg38:Y:5286067-G-T | ** | ||||||
| hg19:Y:5212408-C-A hg38:Y:5344367-C-A | ** | ||||||
| hg19:Y:5319002-C-A hg38:Y:5450961-C-A | ** | ||||||
| hg19:Y:5358647-A-C hg38:Y:5490606-A-C | ** | ||||||
| hg19:Y:5713607-C-A hg38:Y:5845566-C-A | ** | ||||||
| hg19:Y:5724180-T-C hg38:Y:5856139-T-C | ** | ||||||
| hg19:Y:5796727-A-T hg38:Y:5928686-A-T | ** | ||||||
| hg19:Y:6365085-C-A hg38:Y:6497044-C-A | ** | ||||||
| hg19:Y:6428660-C-A hg38:Y:6560619-C-A | ** | ||||||
| hg19:Y:6621414-C-T hg38:Y:6753373-C-T | ** | ||||||
| hg19:Y:6734427-C-A hg38:Y:6866386-C-A | ** | ||||||
| hg19:Y:7081763-G-A hg38:Y:7213722-G-A | ** | ||||||
| hg19:Y:7100954-CTTTTTTT-C hg38:Y:7232913-CTTTTTTT-C | 32×T | ** | |||||
| hg19:Y:7103531-A-C hg38:Y:7235490-A-C | ** | ||||||
| hg19:Y:7123770-C-A hg38:Y:7255729-C-A | ** | ||||||
| hg19:Y:7157056-C-A hg38:Y:7289015-C-A | ** | ||||||
| hg19:Y:7217913-C-A hg38:Y:7349872-C-A | ** | ||||||
| hg19:Y:7254267-C-A hg38:Y:7386226-C-A | ** | ||||||
| hg19:Y:7295912-C-A hg38:Y:7427871-C-A | ** | ||||||
| hg19:Y:7633376-C-A hg38:Y:7765335-C-A | ** | ||||||
| hg19:Y:7711558-A-G hg38:Y:7843517-A-G | ** | ||||||
| hg19:Y:7853099-T-G hg38:Y:7985058-T-G | ** | ||||||
| hg19:Y:7867880-GAAAGAAAGA-G hg38:Y:7999839-GAAAGAAAGA-G | ** | ||||||
| hg19:Y:8786803-C-T hg38:Y:8918762-C-T | FGC25804 | ** | |||||
| hg19:Y:8853084-G-T hg38:Y:8985043-G-T | ** | ||||||
| hg19:Y:8913124-CCTTGGAATTCAT-C hg38:Y:9045083-CCTTGGAATTCAT-C | ** | ||||||
| hg38:Y:9109283-G-T | ** | ||||||
| hg19:Y:9381380-C-A hg38:Y:9543771-C-A | ** | ||||||
| hg19:Y:9382245-G-A hg38:Y:9544636-G-A | ** | ||||||
| hg19:Y:9391517-G-T hg38:Y:9553908-G-T | ** | ||||||
| hg19:Y:9457217-C-A hg38:Y:9619608-C-A | ** | ||||||
| hg19:Y:9772159-C-A hg38:Y:9934550-C-A | ** | ||||||
| hg19:Y:9804106-A-G hg38:Y:9966497-A-G | ** | ||||||
| hg19:Y:9890478-G-A hg38:Y:10052869-G-A | ** | ||||||
| hg19:Y:10010461-A-G hg38:Y:10172852-A-G | ** | ||||||
| hg38:Y:10653477-C-G | ** | ||||||
| hg38:Y:10668451-CTCTTTTTCAT-C | ** | ||||||
| hg38:Y:10683954-C-A | ** | ||||||
| hg38:Y:10691386-C-A | ** | ||||||
| hg38:Y:10748057-A-G | ** | ||||||
| hg38:Y:10755365-T-A | ** | ||||||
| hg38:Y:10756621-T-C | ** | ||||||
| hg38:Y:10765159-A-T | ** | ||||||
| hg38:Y:10765166-C-T | ** | ||||||
| hg38:Y:10765201-A-G | FT430221 | ** | |||||
| hg38:Y:10784046-C-A | ** | ||||||
| hg38:Y:10796826-C-A | ** | ||||||
| hg38:Y:10808941-T-C | ** | ||||||
| hg38:Y:10808964-A-T | ** | ||||||
| hg38:Y:10824790-T-G | ** | ||||||
| hg38:Y:10826956-T-C | ** | ||||||
| hg38:Y:10826963-C-T | ** | ||||||
| hg38:Y:10830104-C-A | ** | ||||||
| hg38:Y:10850614-C-G | ** | ||||||
| hg38:Y:10869522-T-C | ** | ||||||
| hg38:Y:10904353-C-A | ** | ||||||
| hg38:Y:10913832-G-T | ** | ||||||
| hg38:Y:10916085-G-T | ** | ||||||
| hg38:Y:10923870-G-A | ** | ||||||
| hg38:Y:10944014-C-A | ** | ||||||
| hg38:Y:10973231-A-T | ** | ||||||
| hg38:Y:10975366-C-A | ** | ||||||
| hg38:Y:10986672-N-T | ** | ||||||
| hg38:Y:10995091-C-A | ** | ||||||
| hg38:Y:11025273-C-T | ** | ||||||
| hg38:Y:11026424-G-T | ** | ||||||
| hg38:Y:11030710-T-G | ** | ||||||
| hg38:Y:11031713-C-T | ** | ||||||
| hg19:Y:13263036-C-G hg38:Y:11107360-C-G | ** | ||||||
| hg19:Y:13308246-C-A hg38:Y:11152570-C-A | ** | ||||||
| hg19:Y:13369913-G-T hg38:Y:11214237-G-T | ** | ||||||
| hg19:Y:13463952-C-CAGG hg38:Y:11308276-C-CAGG | ** | ||||||
| hg19:Y:13483952-T-A hg38:Y:11328276-T-A | ** | ||||||
| hg19:Y:13484507-A-T hg38:Y:11328831-A-T | ** | ||||||
| hg19:Y:13484514-C-A hg38:Y:11328838-C-A | ** | ||||||
| hg19:Y:13522877-G-A hg38:Y:11367201-G-A | ** | ||||||
| hg19:Y:13714988-A-T hg38:Y:11559312-A-T | DYZ17 | ** | |||||
| hg38:Y:11645023-G-T | DYZ17 | ** | |||||
| hg38:Y:11650122-C-A | DYZ17 | ** | |||||
| hg38:Y:11664455-C-A | DYZ17 | ** | |||||
| hg19:Y:13974888-C-A hg38:Y:11854182-C-A | ** | ||||||
| hg19:Y:14029371-T-A hg38:Y:11908665-T-A | ** | ||||||
| hg19:Y:14054183-C-A hg38:Y:11933477-C-A | ** | ||||||
| hg19:Y:14125079-G-A hg38:Y:12004373-G-A | ** | ||||||
| hg19:Y:14125087-A-G hg38:Y:12004381-A-G | ** | ||||||
| hg19:Y:14125097-C-G hg38:Y:12004391-C-G | ** | ||||||
| hg19:Y:14342499-C-A hg38:Y:12221794-C-A | ** | ||||||
| hg19:Y:14513240-G-C hg38:Y:12401445-G-C | ** | ||||||
| hg19:Y:14526565-C-G hg38:Y:12414766-C-G | BY71519 | FT245948 | ** | ||||
| hg19:Y:14526740-C-A hg38:Y:12414941-C-A | ** | ||||||
| hg19:Y:14592221-C-A hg38:Y:12480421-C-A | ** | ||||||
| hg19:Y:14649688-C-A hg38:Y:12537753-C-A | ** | ||||||
| hg19:Y:14778926-T-A hg38:Y:12666996-T-A | ** | ||||||
| hg19:Y:15034715-T-A hg38:Y:12922803-T-A | ** | ||||||
| hg19:Y:15275717-C-A hg38:Y:13163806-C-A | ** | ||||||
| hg19:Y:15347018-C-A hg38:Y:13235137-C-A | ** | ||||||
| hg19:Y:15573643-A-C hg38:Y:13461763-A-C | ** | ||||||
| hg19:Y:15652963-C-A hg38:Y:13541083-C-A | ** | ||||||
| hg19:Y:15698218-C-A hg38:Y:13586338-C-A | ** | ||||||
| hg19:Y:15928399-CA-C hg38:Y:13816519-CA-C | ** | ||||||
| hg19:Y:16004279-G-A hg38:Y:13892399-G-A | ** | ||||||
| hg19:Y:16095669-C-A hg38:Y:13983789-C-A | ** | ||||||
| hg19:Y:16172098-G-T hg38:Y:14060218-G-T | ** | ||||||
| hg19:Y:16405245-C-A hg38:Y:14293365-C-A | ** | ||||||
| hg19:Y:16484113-T-A hg38:Y:14372233-T-A | ** | ||||||
| hg19:Y:16549626-A-C hg38:Y:14437746-A-C | ** | ||||||
| hg19:Y:16554107-T-A hg38:Y:14442227-T-A | ** | ||||||
| hg19:Y:16562959-C-A hg38:Y:14451079-C-A | ** | ||||||
| hg19:Y:16568005-C-A hg38:Y:14456125-C-A | ** | ||||||
| hg19:Y:16705391-C-A hg38:Y:14593511-C-A | ** | ||||||
| hg19:Y:16843236-T-G hg38:Y:14731356-T-G | ** | ||||||
| hg19:Y:16967362-C-A hg38:Y:14855482-C-A | ** | ||||||
| hg19:Y:17006554-G-A hg38:Y:14894674-G-A | ** | ||||||
| hg19:Y:17158540-T-G hg38:Y:15046660-T-G | ** | ||||||
| hg19:Y:17158545-G-C hg38:Y:15046665-G-C | ** | ||||||
| hg19:Y:17212148-T-G hg38:Y:15100268-T-G | ** | ||||||
| hg19:Y:17305270-C-A hg38:Y:15193390-C-A | FT64230 | ** | |||||
| hg19:Y:17370992-G-T hg38:Y:15259112-G-T | ** | ||||||
| hg19:Y:17440534-G-T hg38:Y:15328654-G-T | ** | ||||||
| hg19:Y:17502613-T-C hg38:Y:15390733-T-C | ** | ||||||
| hg19:Y:18050263-C-A hg38:Y:15938383-C-A | ** | ||||||
| hg19:Y:18172529-C-A hg38:Y:16060649-C-A | ** | ||||||
| hg19:Y:18183120-G-T hg38:Y:16071240-G-T | ** | ||||||
| hg19:Y:18566039-C-A hg38:Y:16454159-C-A | ** | ||||||
| hg19:Y:18604493-C-A hg38:Y:16492613-C-A | ** | ||||||
| hg19:Y:18926729-C-A hg38:Y:16814849-C-A | ** | ||||||
| hg19:Y:18927486-T-C hg38:Y:16815606-T-C | ** | ||||||
| hg19:Y:19052058-G-A hg38:Y:16940178-G-A | FT48168 | ** | |||||
| hg19:Y:19065173-C-A hg38:Y:16953293-C-A | ** | ||||||
| hg19:Y:19097591-A-G hg38:Y:16985711-A-G | ** | ||||||
| hg19:Y:19162022-T-C hg38:Y:17050142-T-C | ** | ||||||
| hg19:Y:19213546-C-G hg38:Y:17101666-C-G | ** | ||||||
| hg19:Y:19411970-G-GAAAGAA hg38:Y:17300090-G-GAAAGAA | ** | ||||||
| hg19:Y:19515114-C-A hg38:Y:17403234-C-A | ** | ||||||
| hg19:Y:19575908-T-C hg38:Y:17464028-T-C | P5_Prx | ** | |||||
| hg19:Y:19820842-A-G hg38:Y:17708962-A-G | P5_Prx | ** | |||||
| hg19:Y:20280169-TC-T hg38:Y:18118283-TC-T | P5_Dst | ** | |||||
| hg19:Y:21118540-C-A hg38:Y:18956654-C-A | ** | ||||||
| hg19:Y:21220801-C-G hg38:Y:19058915-C-G | ** | ||||||
| hg19:Y:21224886-T-G hg38:Y:19063000-T-G | ** | ||||||
| hg19:Y:21225181-T-G hg38:Y:19063295-T-G | ** | ||||||
| hg19:Y:21283551-C-A hg38:Y:19121665-C-A | ** | ||||||
| hg19:Y:21382494-G-A hg38:Y:19220608-G-A | ** | ||||||
| hg19:Y:21428462-C-A hg38:Y:19266576-C-A | ** | ||||||
| hg19:Y:21920657-C-A hg38:Y:19758771-C-A | ** | ||||||
| hg19:Y:22526286-G-A hg38:Y:20364400-G-A | ** | ||||||
| hg19:Y:22603319-A-G hg38:Y:20441433-A-G | ** | ||||||
| hg19:Y:22776036-A-T hg38:Y:20614150-A-T | ** | ||||||
| hg19:Y:22875446-A-C hg38:Y:20713560-A-C | ** | ||||||
| hg19:Y:23033522-C-A hg38:Y:20871636-C-A | ** | ||||||
| hg19:Y:23047606-T-C hg38:Y:20885720-T-C | ** | ||||||
| hg19:Y:23081935-A-G hg38:Y:20920049-A-G | ** | ||||||
| hg19:Y:23111790-C-A hg38:Y:20949904-C-A | ** | ||||||
| hg19:Y:23255670-A-C hg38:Y:21093784-A-C | ** | ||||||
| hg19:Y:23745432-G-A hg38:Y:21583546-G-A | ** | ||||||
| hg19:Y:23832973-C-A hg38:Y:21671087-C-A | ** | ||||||
| hg19:Y:23837202-G-T hg38:Y:21675316-G-T | ** | ||||||
| hg19:Y:23844996-G-T hg38:Y:21683110-G-T | ** | ||||||
| hg19:Y:23876229-C-G hg38:Y:21714343-C-G | ** | ||||||
| hg19:Y:24074202-C-A hg38:Y:21928055-C-A | P3_b1 | ** | |||||
| hg19:Y:24112776-T-G hg38:Y:21966629-T-G | P3_b1 | ** | |||||
| hg19:Y:24389101-C-T hg38:Y:22242954-C-T | ** | ||||||
| hg19:Y:24405012-A-T hg38:Y:22258865-A-T | ** | ||||||
| hg19:Y:24613956-GTGTGT-G hg38:Y:22467809-GTGTGT-G | P3_t2 | ** | |||||
| hg19:Y:27499335-AAAAAAG-A hg38:Y:25353188-AAAAAAG-A | P1_Y2 | ** | |||||
| hg19:Y:27863551-G-T hg38:Y:25717404-G-T | P1_Y2 | ** | |||||
| hg19:Y:28223881-G-T hg38:Y:26077734-G-T | P1_b4 | ** | |||||
| hg19:Y:28466406-C-A hg38:Y:26320259-C-A | ** | ||||||
| hg19:Y:28755964-G-T hg38:Y:26609817-G-T | ** | ||||||
| hg19:Y:2960041-G-A hg38:Y:3092000-G-A | *** | ||||||
| hg38:Y:10789405-C-A,G | *** | ||||||
| hg19:Y:23248544-TA-T hg38:Y:21086658-TA-T | 8×A | *** | |||||
| hg38:Y:10987835-ATTCC-A | *** | ||||||
| hg38:Y:10807235-T-C | *** | ||||||
| hg19:Y:23495846-CTTT-C hg38:Y:21333960-CTTT-C | 14×T | *** | |||||
| hg19:Y:22802868-ATTTTTT-A hg38:Y:20640982-ATTTTTT-A | 32×T | *** | |||||
| hg19:Y:8549032-GTTTT-G hg38:Y:8680991-GTTTT-G | 23×T | *** | |||||
| hg19:Y:23860427-T-TA hg38:Y:21698541-T-TA | 8×A | *** | |||||
| hg19:Y:16823945-C-A hg38:Y:14712065-C-A | *** | ||||||
| hg19:Y:21469243-CT-C,CTT hg38:Y:19307357-CT-C,CTT | 13×T | *** | |||||
| hg19:Y:17293121-A-AT hg38:Y:15181241-A-AT | 9×T | *** | |||||
| hg19:Y:28745224-C-A hg38:Y:26599077-C-A | *** | ||||||
| hg38:Y:10814533-C-A | *** | ||||||
| hg19:Y:3500712-C-A hg38:Y:3632671-C-A | *** | ||||||
| hg19:Y:13457781-G-GAGTT hg38:Y:11302105-G-GAGTT | *** | ||||||
| hg19:Y:13902312-C-T hg38:Y:11781606-C-T | *** | ||||||
| hg19:Y:13194032-GCACTT-G hg38:Y:11038356-GCACTT-G | *** | ||||||
| hg19:Y:15217530-C-A hg38:Y:13105616-C-A | *** | ||||||
| hg38:Y:11031637-G-A | FT303189 | *** | |||||
| hg19:Y:13471914-T-C hg38:Y:11316238-T-C | *** | ||||||
| hg19:Y:22886416-C-A hg38:Y:20724530-C-A | *** | ||||||
| hg19:Y:17564912-GAA-G,GAAA hg38:Y:15453032-GAA-G,GAAA | 16×A | *** | |||||
| hg19:Y:3131512-TTCTCTTCTCTTCTCTTCTCC-T,TTCTCTTCTCTTCTCTTCTCT hg38:Y:3263471-TTCTCTTCTCTTCTCTTCTCC-T,TTCTCTTCTCTTCTCTTCTCT | *** | ||||||
| hg19:Y:13194090-C-A hg38:Y:11038414-C-A | *** | ||||||
| hg19:Y:2702963-C-A hg38:Y:2834922-C-A | *** | ||||||
| hg19:Y:6650102-C-A hg38:Y:6782061-C-A | *** | ||||||
| hg19:Y:7636010-TAAA-T,TAAAA hg38:Y:7767969-TAAA-T,TAAAA | 15×A | *** | |||||
| hg19:Y:7768694-C-A hg38:Y:7900653-C-A | *** | ||||||
| hg19:Y:9019003-C-A hg38:Y:9181394-C-A | *** | ||||||
| hg19:Y:9195534-C-A hg38:Y:9357925-C-A | *** | ||||||
| hg19:Y:10035557-C-A hg38:Y:10197948-C-A | *** | ||||||
| hg38:Y:10682546-C-T | *** | ||||||
| hg38:Y:10935262-C-A | *** | ||||||
| hg38:Y:10981422-C-A | *** | ||||||
| hg19:Y:13526126-C-A hg38:Y:11370450-C-A | *** | ||||||
| hg38:Y:11643261-GTGAAGT-G | DYZ17 | *** | |||||
| hg19:Y:14219785-C-A hg38:Y:12099079-C-A | *** | ||||||
| hg19:Y:14764797-C-A hg38:Y:12652866-C-A | *** | ||||||
| hg19:Y:14895109-C-A hg38:Y:12783175-C-A | *** | ||||||
| hg19:Y:15030070-C-A hg38:Y:12918158-C-A | *** | ||||||
| hg19:Y:15399730-C-A hg38:Y:13287850-C-A | *** | ||||||
| hg19:Y:15490365-A-AT hg38:Y:13378485-A-AT | *** | ||||||
| hg19:Y:15592851-C-T hg38:Y:13480971-C-T | *** | ||||||
| hg19:Y:15681955-C-A hg38:Y:13570075-C-A | *** | ||||||
| hg19:Y:16420718-T-C hg38:Y:14308838-T-C | *** | ||||||
| hg19:Y:17654147-C-A hg38:Y:15542267-C-A | *** | ||||||
| hg19:Y:17940189-C-A hg38:Y:15828309-C-A | FT181282 | *** | |||||
| hg19:Y:17946635-CTTTTT-C,CTTTT hg38:Y:15834755-CTTTTT-C,CTTTT | 20×T | *** | |||||
| hg19:Y:17976534-G-A hg38:Y:15864654-G-A | *** | ||||||
| hg19:Y:18711623-C-A hg38:Y:16599743-C-A | *** | ||||||
| hg19:Y:18827116-C-G hg38:Y:16715236-C-G | *** | ||||||
| hg19:Y:19378242-C-A hg38:Y:17266362-C-A | *** | ||||||
| hg19:Y:19539488-C-A hg38:Y:17427608-C-A | *** | ||||||
| hg19:Y:21071271-A-ATT hg38:Y:18909385-A-ATT | 13×T | *** | |||||
| hg19:Y:21355052-GAAA-G,GAAAA hg38:Y:19193166-GAAA-G,GAAAA | 15×A | *** | |||||
| hg19:Y:21545698-C-A hg38:Y:19383812-C-A | *** | ||||||
| hg19:Y:22521753-C-A hg38:Y:20359867-C-A | *** | ||||||
| hg19:Y:22583867-G-T hg38:Y:20421981-G-T | *** | ||||||
| hg19:Y:28798507-A-G hg38:Y:26652360-A-G | *** | ||||||
| hg38:Y:56827601-C-A | *** | ||||||
| hg38:Y:56837272-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: N46299 | 8960076 | 7349645 | 7305385 |
| Used in age calculations | 8960076 | 7349645 | 7305385 |
| Counts of SNPs | 2 | 2 |
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