unknown
BigY2: 489258Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 489258 |
|---|---|---|---|---|---|---|---|
| hg19:Y:25894654-A-C hg38:Y:23748507-A-C | P1_Y1 | A* | |||||
| hg19:Y:14393608-G-T hg38:Y:12272904-G-T | BY95402 | Y | Y | + | |||
| hg19:Y:13623911-C-CATAT hg38:Y:11468235-C-CATAT | 10×AT | ** | |||||
| hg19:Y:15922309-G-T hg38:Y:13810429-G-T | ** | ||||||
| hg19:Y:23098137-C-A hg38:Y:20936251-C-A | ** | ||||||
| hg19:Y:4151936-C-A hg38:Y:4283895-C-A | 17×A | ** | |||||
| hg19:Y:4888104-AC-A hg38:Y:5020063-AC-A | ** | ||||||
| hg19:Y:8321465-GTTTA-G hg38:Y:8453424-GTTTA-G | 5×TTTA | ** | |||||
| hg19:Y:21220240-CTTTTT-C hg38:Y:19058354-CTTTTT-C | 19×T | ** | |||||
| hg19:Y:15084466-CTTTTT-C hg38:Y:12972556-CTTTTT-C | 19×T | ** | |||||
| hg19:Y:13481996-C-A hg38:Y:11326320-C-A | ** | ||||||
| hg19:Y:4665901-C-A hg38:Y:4797860-C-A | ** | ||||||
| hg38:Y:10921821-T-A | ** | ||||||
| hg19:Y:16432931-C-A hg38:Y:14321051-C-A | ** | ||||||
| hg38:Y:11016366-C-A | ** | ||||||
| hg38:Y:10962707-C-A | ** | ||||||
| hg19:Y:26018406-TG-T hg38:Y:23872259-TG-T | P1_Y1 | ** | |||||
| hg19:Y:13485696-C-G hg38:Y:11330020-C-G | ** | ||||||
| hg38:Y:10859981-C-T | ** | ||||||
| hg19:Y:23415342-A-AT hg38:Y:21253456-A-AT | 21×T | ** | |||||
| hg38:Y:11015677-G-C | ** | ||||||
| hg38:Y:11015721-C-G | ** | ||||||
| hg38:Y:11015739-C-A | ** | ||||||
| hg19:Y:14376557-C-A hg38:Y:12255853-C-A | ** | ||||||
| hg38:Y:10905974-C-T | ** | ||||||
| hg38:Y:10905985-G-T | ** | ||||||
| hg38:Y:10906009-A-C | ** | ||||||
| hg38:Y:10759835-CA-C | ** | ||||||
| hg19:Y:5170487-C-A hg38:Y:5302446-C-A | ** | ||||||
| hg38:Y:10925500-A-T | ** | ||||||
| hg19:Y:21090971-C-A hg38:Y:18929085-C-A | ** | ||||||
| hg19:Y:21551524-G-T hg38:Y:19389638-G-T | ** | ||||||
| hg19:Y:5802952-G-T hg38:Y:5934911-G-T | ** | ||||||
| hg38:Y:10965091-C-A | ** | ||||||
| hg19:Y:6882158-C-A hg38:Y:7014117-C-A | ** | ||||||
| hg38:Y:10856733-G-T | ** | ||||||
| hg19:Y:3696376-C-A hg38:Y:3828335-C-A | ** | ||||||
| hg38:Y:10894959-G-C | ** | ||||||
| hg19:Y:13485557-G-C hg38:Y:11329881-G-C | ** | ||||||
| hg19:Y:5861616-C-A hg38:Y:5993575-C-A | ** | ||||||
| hg38:Y:10750694-C-G | ** | ||||||
| hg19:Y:16052794-C-A hg38:Y:13940914-C-A | ** | ||||||
| hg38:Y:11003271-G-C | ** | ||||||
| hg38:Y:11006177-C-A | ** | ||||||
| hg19:Y:18127846-C-A hg38:Y:16015966-C-A | FT274651 | ** | |||||
| hg19:Y:13928088-C-A hg38:Y:11807382-C-A | ** | ||||||
| hg19:Y:7391791-C-A hg38:Y:7523750-C-A | ** | ||||||
| hg19:Y:5204606-C-A hg38:Y:5336565-C-A | ** | ||||||
| hg19:Y:6765677-C-A hg38:Y:6897636-C-A | ** | ||||||
| hg19:Y:28759578-C-A hg38:Y:26613431-C-A | ** | ||||||
| hg19:Y:5359723-G-T hg38:Y:5491682-G-T | ** | ||||||
| hg38:Y:10748698-G-A | ** | ||||||
| hg38:Y:10748706-T-C | ** | ||||||
| hg38:Y:10983976-A-T | ** | ||||||
| hg19:Y:7107631-C-A hg38:Y:7239590-C-A | ** | ||||||
| hg19:Y:22085802-C-T hg38:Y:19923916-C-T | ** | ||||||
| hg19:Y:15060457-C-A hg38:Y:12948549-C-A | ** | ||||||
| hg38:Y:10789505-A-G | ** | ||||||
| hg19:Y:3116087-C-A hg38:Y:3248046-C-A | ** | ||||||
| hg19:Y:3419982-GT-G hg38:Y:3551941-GT-G | 12×T | ** | |||||
| hg19:Y:4750789-C-A hg38:Y:4882748-C-A | ** | ||||||
| hg19:Y:22644625-C-A hg38:Y:20482739-C-A | ** | ||||||
| hg19:Y:18756143-C-A hg38:Y:16644263-C-A | ** | ||||||
| hg19:Y:22598739-C-A hg38:Y:20436853-C-A | ** | ||||||
| hg19:Y:15987348-C-A hg38:Y:13875468-C-A | ** | ||||||
| hg19:Y:23464882-C-A hg38:Y:21302996-C-A | ** | ||||||
| hg19:Y:4073461-G-T hg38:Y:4205420-G-T | ** | ||||||
| hg19:Y:4402040-C-A hg38:Y:4533999-C-A | ** | ||||||
| hg19:Y:28479749-C-A hg38:Y:26333602-C-A | ** | ||||||
| hg19:Y:7385924-C-A hg38:Y:7517883-C-A | ** | ||||||
| hg19:Y:13584738-C-A hg38:Y:11429062-C-A | ** | ||||||
| hg19:Y:18401546-C-A hg38:Y:16289666-C-A | P6_Gap | ** | |||||
| hg19:Y:18226120-C-A hg38:Y:16114240-C-A | ** | ||||||
| hg19:Y:13453317-TGC-T hg38:Y:11297641-TGC-T | ** | ||||||
| hg19:Y:13453303-C-T hg38:Y:11297627-C-T | ** | ||||||
| hg19:Y:15747456-G-T hg38:Y:13635576-G-T | ** | ||||||
| hg19:Y:14468368-C-A hg38:Y:12347637-C-A | ** | ||||||
| hg38:Y:10892627-C-A | ** | ||||||
| hg38:Y:10793683-C-A | ** | ||||||
| hg19:Y:5246686-G-T hg38:Y:5378645-G-T | ** | ||||||
| hg19:Y:22820411-C-A hg38:Y:20658525-C-A | ** | ||||||
| hg19:Y:24254085-CAA-C hg38:Y:22107938-CAA-C | P3_b1 | 11×A | ** | ||||
| hg19:Y:13712613-G-A hg38:Y:11556937-G-A | DYZ17 | ** | |||||
| hg38:Y:10950298-G-T | ** | ||||||
| hg38:Y:10750697-A-G | ** | ||||||
| hg19:Y:28361445-T-TA hg38:Y:26215298-T-TA | P1_gr2 | ** | |||||
| hg19:Y:28657583-C-A hg38:Y:26511436-C-A | ** | ||||||
| hg19:Y:24870855-G-T hg38:Y:22724708-G-T | IR1_R | ** | |||||
| hg38:Y:10844890-T-A | ** | ||||||
| hg19:Y:15943628-C-A hg38:Y:13831748-C-A | ** | ||||||
| hg38:Y:11014091-C-A | ** | ||||||
| hg38:Y:10964177-C-A | ** | ||||||
| hg38:Y:10906036-T-C | ** | ||||||
| hg19:Y:22422130-T-G hg38:Y:20260244-T-G | DYZ19 | ** | |||||
| hg19:Y:5103307-A-AT hg38:Y:5235266-A-AT | 9×T | ** | |||||
| hg38:Y:10964558-A-T | ** | ||||||
| hg19:Y:13705515-G-A hg38:Y:11549839-G-A | DYZ17 | ** | |||||
| hg38:Y:10750672-C-A | ** | ||||||
| hg19:Y:22810025-C-A hg38:Y:20648139-C-A | ** | ||||||
| hg19:Y:15688968-C-A hg38:Y:13577088-C-A | FT180436 | ** | |||||
| hg19:Y:5818418-A-G hg38:Y:5950377-A-G | ** | ||||||
| hg38:Y:10948290-C-A | ** | ||||||
| hg19:Y:13902222-C-A hg38:Y:11781516-C-A | ** | ||||||
| hg38:Y:10961235-C-G | ** | ||||||
| hg38:Y:10961264-T-A | ** | ||||||
| hg38:Y:10961266-C-T | ** | ||||||
| hg19:Y:23256280-C-A hg38:Y:21094394-C-A | ** | ||||||
| hg38:Y:10883506-T-G | ** | ||||||
| hg19:Y:13234365-C-A hg38:Y:11078689-C-A | ** | ||||||
| hg38:Y:10770406-C-A | ** | ||||||
| hg38:Y:10834816-A-T | ** | ||||||
| hg19:Y:16692754-A-T hg38:Y:14580874-A-T | ** | ||||||
| hg19:Y:14067282-C-A hg38:Y:11946576-C-A | ** | ||||||
| hg19:Y:8736984-C-A hg38:Y:8868943-C-A | ** | ||||||
| hg38:Y:10750723-G-T | ** | ||||||
| hg38:Y:10880466-C-A | ** | ||||||
| hg38:Y:10967312-C-A | ** | ||||||
| hg19:Y:4004155-G-T hg38:Y:4136114-G-T | ** | ||||||
| hg38:Y:10932269-C-A | FT437067 | ** | |||||
| hg19:Y:19479999-C-A hg38:Y:17368119-C-A | ** | ||||||
| hg38:Y:10750716-A-G | ** | ||||||
| hg38:Y:10946615-A-T | ** | ||||||
| hg38:Y:11015733-A-T | ** | ||||||
| hg38:Y:10828338-G-T | ** | ||||||
| hg19:Y:5204618-G-T hg38:Y:5336577-G-T | ** | ||||||
| hg19:Y:6401461-C-A hg38:Y:6533420-C-A | ** | ||||||
| hg19:Y:16429101-G-T hg38:Y:14317221-G-T | ** | ||||||
| hg38:Y:10935434-A-C | ** | ||||||
| hg38:Y:10935449-C-A | ** | ||||||
| hg19:Y:9419004-C-A hg38:Y:9581395-C-A | ** | ||||||
| hg19:Y:18901095-C-A hg38:Y:16789215-C-A | ** | ||||||
| hg38:Y:10691037-C-G | ** | ||||||
| hg19:Y:9959777-G-A hg38:Y:10122168-G-A | ** | ||||||
| hg38:Y2:27423-G-A | ** | ||||||
| hg19:Y:25647085-G-T hg38:Y:23500938-G-T | P1_b3 | ** | |||||
| hg38:Y:56830208-C-CACTCCACTCA | ** | ||||||
| hg19:Y:20824898-C-A hg38:Y:18663012-C-A | P4_Gap | ** | |||||
| hg19:Y:5710498-C-A hg38:Y:5842457-C-A | ** | ||||||
| hg38:Y:10955271-C-G | ** | ||||||
| hg38:Y:10672056-C-A | ** | ||||||
| hg38:Y:10769926-T-A | ** | ||||||
| hg19:Y:2708291-C-G hg38:Y:2840250-C-G | ** | ||||||
| hg19:Y:2773826-G-T hg38:Y:2905785-G-T | ** | ||||||
| hg19:Y:2775003-C-A hg38:Y:2906962-C-A | ** | ||||||
| hg19:Y:2856515-C-G hg38:Y:2988474-C-G | ** | ||||||
| hg19:Y:2856523-T-G hg38:Y:2988482-T-G | ** | ||||||
| hg19:Y:2856555-C-G hg38:Y:2988514-C-G | ** | ||||||
| hg19:Y:2919140-T-C hg38:Y:3051099-T-C | ** | ||||||
| hg19:Y:2927402-C-A hg38:Y:3059361-C-A | ** | ||||||
| hg19:Y:3013473-C-A hg38:Y:3145432-C-A | ** | ||||||
| hg19:Y:3023823-C-A hg38:Y:3155782-C-A | ** | ||||||
| hg19:Y:3037249-T-G hg38:Y:3169208-T-G | ** | ||||||
| hg19:Y:3164628-T-G hg38:Y:3296587-T-G | ** | ||||||
| hg19:Y:3170928-G-T hg38:Y:3302887-G-T | ** | ||||||
| hg19:Y:3176644-C-A hg38:Y:3308603-C-A | ** | ||||||
| hg19:Y:3324213-G-T hg38:Y:3456172-G-T | ** | ||||||
| hg19:Y:3491190-G-T hg38:Y:3623149-G-T | ** | ||||||
| hg19:Y:3514577-G-T hg38:Y:3646536-G-T | ** | ||||||
| hg19:Y:3658012-A-G hg38:Y:3789971-A-G | ** | ||||||
| hg19:Y:3686154-C-A hg38:Y:3818113-C-A | ** | ||||||
| hg19:Y:3722132-G-T hg38:Y:3854091-G-T | ** | ||||||
| hg19:Y:3770098-G-T hg38:Y:3902057-G-T | ** | ||||||
| hg19:Y:3829225-C-A hg38:Y:3961184-C-A | ** | ||||||
| hg19:Y:3855469-G-T hg38:Y:3987428-G-T | ** | ||||||
| hg19:Y:3881637-G-T hg38:Y:4013596-G-T | ** | ||||||
| hg19:Y:3920768-C-A hg38:Y:4052727-C-A | ** | ||||||
| hg19:Y:4004171-G-T hg38:Y:4136130-G-T | ** | ||||||
| hg19:Y:4012675-G-T hg38:Y:4144634-G-T | ** | ||||||
| hg19:Y:4110702-G-T hg38:Y:4242661-G-T | ** | ||||||
| hg19:Y:4146924-T-A hg38:Y:4278883-T-A | ** | ||||||
| hg19:Y:4169340-C-A hg38:Y:4301299-C-A | ** | ||||||
| hg19:Y:4171706-A-C hg38:Y:4303665-A-C | ** | ||||||
| hg19:Y:4201586-T-C hg38:Y:4333545-T-C | ** | ||||||
| hg19:Y:4241181-G-T hg38:Y:4373140-G-T | ** | ||||||
| hg19:Y:4247869-G-T hg38:Y:4379828-G-T | ** | ||||||
| hg19:Y:4251218-G-T hg38:Y:4383177-G-T | ** | ||||||
| hg19:Y:4317727-C-A hg38:Y:4449686-C-A | ** | ||||||
| hg19:Y:4321797-T-C hg38:Y:4453756-T-C | ** | ||||||
| hg19:Y:4321859-C-A hg38:Y:4453818-C-A | ** | ||||||
| hg19:Y:4402659-A-G hg38:Y:4534618-A-G | ** | ||||||
| hg19:Y:4444893-C-A hg38:Y:4576852-C-A | ** | ||||||
| hg19:Y:4597943-C-A hg38:Y:4729902-C-A | ** | ||||||
| hg19:Y:4715723-T-A hg38:Y:4847682-T-A | ** | ||||||
| hg19:Y:4715795-G-T hg38:Y:4847754-G-T | ** | ||||||
| hg19:Y:4728963-G-A hg38:Y:4860922-G-A | ** | ||||||
| hg19:Y:4730315-C-A hg38:Y:4862274-C-A | ** | ||||||
| hg19:Y:4792355-C-A hg38:Y:4924314-C-A | ** | ||||||
| hg19:Y:4830474-G-T hg38:Y:4962433-G-T | ** | ||||||
| hg19:Y:4832229-G-T hg38:Y:4964188-G-T | ** | ||||||
| hg19:Y:4832720-C-A hg38:Y:4964679-C-A | ** | ||||||
| hg19:Y:4832845-C-A hg38:Y:4964804-C-A | ** | ||||||
| hg19:Y:4917203-C-A hg38:Y:5049162-C-A | ** | ||||||
| hg19:Y:4920123-C-A hg38:Y:5052082-C-A | ** | ||||||
| hg19:Y:4960559-C-A hg38:Y:5092518-C-A | ** | ||||||
| hg19:Y:4967279-C-T hg38:Y:5099238-C-T | ** | ||||||
| hg19:Y:5024282-G-T hg38:Y:5156241-G-T | ** | ||||||
| hg19:Y:5049535-C-A hg38:Y:5181494-C-A | ** | ||||||
| hg19:Y:5189619-C-A hg38:Y:5321578-C-A | ** | ||||||
| hg19:Y:5204639-ACC-A hg38:Y:5336598-ACC-A | ** | ||||||
| hg19:Y:5235806-C-A hg38:Y:5367765-C-A | ** | ||||||
| hg19:Y:5236922-G-T hg38:Y:5368881-G-T | ** | ||||||
| hg19:Y:5291938-T-C hg38:Y:5423897-T-C | ** | ||||||
| hg19:Y:5359044-G-T hg38:Y:5491003-G-T | ** | ||||||
| hg19:Y:5409715-A-T hg38:Y:5541674-A-T | ** | ||||||
| hg19:Y:5443709-G-T hg38:Y:5575668-G-T | ** | ||||||
| hg19:Y:5462593-G-T hg38:Y:5594552-G-T | ** | ||||||
| hg19:Y:5465881-G-T hg38:Y:5597840-G-T | ** | ||||||
| hg19:Y:5651765-C-A hg38:Y:5783724-C-A | ** | ||||||
| hg19:Y:5671687-C-A hg38:Y:5803646-C-A | ** | ||||||
| hg19:Y:5716296-G-T hg38:Y:5848255-G-T | ** | ||||||
| hg19:Y:5864510-A-G hg38:Y:5996469-A-G | ** | ||||||
| hg19:Y:5876783-G-C hg38:Y:6008742-G-C | ** | ||||||
| hg19:Y:5876912-G-T hg38:Y:6008871-G-T | ** | ||||||
| hg19:Y:5884841-A-G hg38:Y:6016800-A-G | ** | ||||||
| hg19:Y:5946635-G-T hg38:Y:6078594-G-T | ** | ||||||
| hg19:Y:6065522-A-T hg38:Y:6197481-A-T | ** | ||||||
| hg19:Y:6252869-A-T hg38:Y:6384828-A-T | IR3_Dst | ** | |||||
| hg19:Y:6295385-G-A hg38:Y:6427344-G-A | IR3_Dst | ** | |||||
| hg19:Y:6358071-T-C hg38:Y:6490030-T-C | ** | ||||||
| hg19:Y:6406954-A-G hg38:Y:6538913-A-G | ** | ||||||
| hg19:Y:6771537-G-T hg38:Y:6903496-G-T | ** | ||||||
| hg19:Y:6780691-C-A hg38:Y:6912650-C-A | ** | ||||||
| hg19:Y:6977167-T-A hg38:Y:7109126-T-A | ** | ||||||
| hg19:Y:7015467-C-A hg38:Y:7147426-C-A | ** | ||||||
| hg19:Y:7133944-C-A hg38:Y:7265903-C-A | ** | ||||||
| hg19:Y:7160528-A-T hg38:Y:7292487-A-T | ** | ||||||
| hg19:Y:7165682-G-T hg38:Y:7297641-G-T | ** | ||||||
| hg19:Y:7200593-C-A hg38:Y:7332552-C-A | ** | ||||||
| hg19:Y:7299639-C-A hg38:Y:7431598-C-A | ** | ||||||
| hg19:Y:7346659-C-A hg38:Y:7478618-C-A | ** | ||||||
| hg19:Y:7391755-C-A hg38:Y:7523714-C-A | ** | ||||||
| hg19:Y:7469845-A-G hg38:Y:7601804-A-G | IR1_L | ** | |||||
| hg19:Y:7578859-G-T hg38:Y:7710818-G-T | ** | ||||||
| hg19:Y:8078680-A-C hg38:Y:8210639-A-C | ** | ||||||
| hg19:Y:8678499-C-A hg38:Y:8810458-C-A | ** | ||||||
| hg19:Y:8720178-A-T hg38:Y:8852137-A-T | ** | ||||||
| hg38:Y:9118260-C-A | ** | ||||||
| hg19:Y:9441619-A-C hg38:Y:9604010-A-C | ** | ||||||
| hg19:Y:9472441-G-T hg38:Y:9634832-G-T | ** | ||||||
| hg19:Y:9476755-C-A hg38:Y:9639146-C-A | ** | ||||||
| hg19:Y:9624643-G-T hg38:Y:9787034-G-T | IR3_Prx | ** | |||||
| hg19:Y:9930317-G-A hg38:Y:10092708-G-A | ** | ||||||
| hg19:Y:9941402-C-A hg38:Y:10103793-C-A | ** | ||||||
| hg19:Y:9950683-G-A hg38:Y:10113074-G-A | ** | ||||||
| hg19:Y:9959032-C-A hg38:Y:10121423-C-A | ** | ||||||
| hg19:Y:10039918-T-A hg38:Y:10202309-T-A | ** | ||||||
| hg38:Y:10660014-C-A | FT428447 | ** | |||||
| hg38:Y:10661743-T-A | ** | ||||||
| hg38:Y:10682999-G-T | ** | ||||||
| hg38:Y:10689504-C-A | ** | ||||||
| hg38:Y:10746542-T-G | ** | ||||||
| hg38:Y:10750645-C-T | ** | ||||||
| hg38:Y:10750670-T-A | ** | ||||||
| hg38:Y:10750680-T-C | ** | ||||||
| hg38:Y:10750684-T-A | ** | ||||||
| hg38:Y:10750691-C-T | ** | ||||||
| hg38:Y:10750732-C-A | ** | ||||||
| hg38:Y:10767931-C-A | ** | ||||||
| hg38:Y:10769867-A-G | ** | ||||||
| hg38:Y:10786133-C-A | ** | ||||||
| hg38:Y:10787810-G-T | ** | ||||||
| hg38:Y:10798127-T-G | ** | ||||||
| hg38:Y:10798350-C-G | ** | ||||||
| hg38:Y:10806465-C-A | ** | ||||||
| hg38:Y:10808679-TC-T | ** | ||||||
| hg38:Y:10808684-T-TA | ** | ||||||
| hg38:Y:10814592-C-A | ** | ||||||
| hg38:Y:10821278-G-T | ** | ||||||
| hg38:Y:10831771-C-A | ** | ||||||
| hg38:Y:10832644-T-A | ** | ||||||
| hg38:Y:10832709-G-T | ** | ||||||
| hg38:Y:10851458-TATTCC-T | ** | ||||||
| hg38:Y:10857055-C-A | ** | ||||||
| hg38:Y:10859310-C-A | ** | ||||||
| hg38:Y:10876691-C-A | ** | ||||||
| hg38:Y:10885498-C-A | ** | ||||||
| hg38:Y:10889548-G-T | ** | ||||||
| hg38:Y:10895636-T-G | ** | ||||||
| hg38:Y:10896464-C-A | ** | ||||||
| hg38:Y:10896475-C-A | ** | ||||||
| hg38:Y:10896509-C-T | ** | ||||||
| hg38:Y:10900582-C-A | ** | ||||||
| hg38:Y:10904818-A-G | ** | ||||||
| hg38:Y:10909632-AT-A | ** | ||||||
| hg38:Y:10912120-G-T | ** | ||||||
| hg38:Y:10936333-G-T | ** | ||||||
| hg38:Y:10945361-C-A | ** | ||||||
| hg38:Y:10946613-C-G | ** | ||||||
| hg38:Y:10948610-C-G | ** | ||||||
| hg38:Y:10973142-C-A | ** | ||||||
| hg38:Y:10983966-A-ACCCCT | ** | ||||||
| hg38:Y:10983971-A-T | ** | ||||||
| hg38:Y:10983981-A-T | ** | ||||||
| hg38:Y:10983985-C-CTTTCA | ** | ||||||
| hg38:Y:10983996-A-T | ** | ||||||
| hg38:Y:10997147-T-G | ** | ||||||
| hg38:Y:10998197-A-T | ** | ||||||
| hg38:Y:11004246-AC-A | ** | ||||||
| hg38:Y:11006217-C-A | ** | ||||||
| hg38:Y:11006384-C-A | ** | ||||||
| hg38:Y:11015693-A-T | ** | ||||||
| hg38:Y:11015753-AGTCCT-A | ** | ||||||
| hg38:Y:11031122-G-A | FT440197 | ** | |||||
| hg38:Y:11037170-CTCCAT-C | ** | ||||||
| hg19:Y:13206564-G-A hg38:Y:11050888-G-A | ** | ||||||
| hg19:Y:13234401-G-A hg38:Y:11078725-G-A | FGC66377 | ** | |||||
| hg19:Y:13453314-C-T hg38:Y:11297638-C-T | ** | ||||||
| hg19:Y:13453320-A-ATTTTCCG hg38:Y:11297644-A-ATTTTCCG | ** | ||||||
| hg19:Y:13528202-G-T hg38:Y:11372526-G-T | ** | ||||||
| hg19:Y:13592517-C-A hg38:Y:11436841-C-A | ** | ||||||
| hg19:Y:13705517-A-G hg38:Y:11549841-A-G | DYZ17 | ** | |||||
| hg19:Y:13858874-G-A hg38:Y:11738168-G-A | DYZ17 | ** | |||||
| hg19:Y:13892350-C-A hg38:Y:11771644-C-A | ** | ||||||
| hg19:Y:13936019-T-C hg38:Y:11815313-T-C | ** | ||||||
| hg19:Y:13943195-G-T hg38:Y:11822489-G-T | ** | ||||||
| hg19:Y:13971226-G-A hg38:Y:11850520-G-A | ** | ||||||
| hg19:Y:13971260-G-T hg38:Y:11850554-G-T | ** | ||||||
| hg19:Y:14311730-A-T hg38:Y:12191024-A-T | ** | ||||||
| hg19:Y:14313660-C-A hg38:Y:12192954-C-A | ** | ||||||
| hg38:Y:12376715-T-G | ** | ||||||
| hg19:Y:14531925-C-A hg38:Y:12420126-C-A | ** | ||||||
| hg19:Y:14537959-A-G hg38:Y:12426160-A-G | ** | ||||||
| hg19:Y:14645042-T-G hg38:Y:12533111-T-G | ** | ||||||
| hg19:Y:14910930-C-A hg38:Y:12798997-C-A | ** | ||||||
| hg19:Y:14912893-C-A hg38:Y:12800960-C-A | ** | ||||||
| hg19:Y:15034839-T-G hg38:Y:12922927-T-G | ** | ||||||
| hg19:Y:15034856-T-G hg38:Y:12922944-T-G | ** | ||||||
| hg19:Y:15168066-C-A hg38:Y:13056152-C-A | ** | ||||||
| hg19:Y:15185373-C-T hg38:Y:13073459-C-T | ** | ||||||
| hg19:Y:15235560-C-A hg38:Y:13123646-C-A | ** | ||||||
| hg19:Y:15323433-T-A hg38:Y:13211551-T-A | ** | ||||||
| hg19:Y:15396896-G-T hg38:Y:13285016-G-T | ** | ||||||
| hg19:Y:15468638-C-A hg38:Y:13356758-C-A | ** | ||||||
| hg19:Y:15559015-C-A hg38:Y:13447135-C-A | ** | ||||||
| hg19:Y:15620381-C-A hg38:Y:13508501-C-A | ** | ||||||
| hg19:Y:15636089-T-G hg38:Y:13524209-T-G | ** | ||||||
| hg19:Y:15680323-C-A hg38:Y:13568443-C-A | ** | ||||||
| hg19:Y:15788763-C-A hg38:Y:13676883-C-A | ** | ||||||
| hg19:Y:15917602-C-A hg38:Y:13805722-C-A | ** | ||||||
| hg19:Y:16048671-T-A hg38:Y:13936791-T-A | ** | ||||||
| hg19:Y:16048688-A-C hg38:Y:13936808-A-C | ** | ||||||
| hg19:Y:16351841-G-T hg38:Y:14239961-G-T | ** | ||||||
| hg19:Y:16354391-G-T hg38:Y:14242511-G-T | ** | ||||||
| hg19:Y:16382059-G-T hg38:Y:14270179-G-T | ** | ||||||
| hg19:Y:16467337-T-C hg38:Y:14355457-T-C | ** | ||||||
| hg19:Y:16516419-A-T hg38:Y:14404539-A-T | ** | ||||||
| hg19:Y:16617466-C-A hg38:Y:14505586-C-A | ** | ||||||
| hg19:Y:16663024-T-A hg38:Y:14551144-T-A | ** | ||||||
| hg19:Y:16677528-C-A hg38:Y:14565648-C-A | ** | ||||||
| hg19:Y:16677687-C-A hg38:Y:14565807-C-A | ** | ||||||
| hg19:Y:16700800-C-A hg38:Y:14588920-C-A | ** | ||||||
| hg19:Y:16719956-C-A hg38:Y:14608076-C-A | ** | ||||||
| hg19:Y:16938280-C-A hg38:Y:14826400-C-A | ** | ||||||
| hg19:Y:17117398-C-A hg38:Y:15005518-C-A | ** | ||||||
| hg19:Y:17127127-C-A hg38:Y:15015247-C-A | ** | ||||||
| hg19:Y:17187492-G-C hg38:Y:15075612-G-C | ** | ||||||
| hg19:Y:17346438-G-T hg38:Y:15234558-G-T | ** | ||||||
| hg19:Y:17597977-T-A hg38:Y:15486097-T-A | ** | ||||||
| hg19:Y:17646754-G-T hg38:Y:15534874-G-T | ** | ||||||
| hg19:Y:17788499-C-T hg38:Y:15676619-C-T | ** | ||||||
| hg19:Y:17788507-C-G hg38:Y:15676627-C-G | ** | ||||||
| hg19:Y:17788508-T-C hg38:Y:15676628-T-C | ** | ||||||
| hg19:Y:17788515-T-C hg38:Y:15676635-T-C | ** | ||||||
| hg19:Y:17788516-G-T hg38:Y:15676636-G-T | ** | ||||||
| hg19:Y:17788527-G-C hg38:Y:15676647-G-C | ** | ||||||
| hg19:Y:17855857-G-T hg38:Y:15743977-G-T | ** | ||||||
| hg19:Y:18188810-A-G hg38:Y:16076930-A-G | ** | ||||||
| hg19:Y:18189741-A-T hg38:Y:16077861-A-T | ** | ||||||
| hg19:Y:18189765-A-C hg38:Y:16077885-A-C | ** | ||||||
| hg19:Y:18633642-A-T hg38:Y:16521762-A-T | ** | ||||||
| hg19:Y:18682599-C-A hg38:Y:16570719-C-A | ** | ||||||
| hg19:Y:18819570-G-A hg38:Y:16707690-G-A | ** | ||||||
| hg19:Y:19081786-T-G hg38:Y:16969906-T-G | ** | ||||||
| hg19:Y:19504187-A-G hg38:Y:17392307-A-G | ** | ||||||
| hg19:Y:19537827-C-A hg38:Y:17425947-C-A | ** | ||||||
| hg19:Y:19600396-G-T hg38:Y:17488516-G-T | P5_Prx | ** | |||||
| hg19:Y:19948096-C-A hg38:Y:17836216-C-A | P5_Prx | ** | |||||
| hg19:Y:20470161-T-C hg38:Y:18308275-T-C | P5_Dst | ** | |||||
| hg19:Y:20950443-C-A hg38:Y:18788557-C-A | P4_Dst | ** | |||||
| hg19:Y:20970353-A-AT hg38:Y:18808467-A-AT | P4_Dst | ** | |||||
| hg19:Y:21433242-C-A hg38:Y:19271356-C-A | ** | ||||||
| hg19:Y:21807176-G-T hg38:Y:19645290-G-T | ** | ||||||
| hg19:Y:21884810-CA-C hg38:Y:19722924-CA-C | ** | ||||||
| hg19:Y:21887804-C-A hg38:Y:19725918-C-A | ** | ||||||
| hg19:Y:21958444-G-T hg38:Y:19796558-G-T | ** | ||||||
| hg19:Y:22011639-T-A hg38:Y:19849753-T-A | ** | ||||||
| hg19:Y:22198700-C-A hg38:Y:20036814-C-A | ** | ||||||
| hg19:Y:22454770-A-T hg38:Y:20292884-A-T | DYZ19 | ** | |||||
| hg19:Y:22732885-T-G hg38:Y:20570999-T-G | ** | ||||||
| hg19:Y:22776958-C-A hg38:Y:20615072-C-A | ** | ||||||
| hg19:Y:22809979-G-A hg38:Y:20648093-G-A | ** | ||||||
| hg19:Y:22879428-A-G hg38:Y:20717542-A-G | ** | ||||||
| hg19:Y:22901962-C-A hg38:Y:20740076-C-A | ** | ||||||
| hg19:Y:22901962-C-CA hg38:Y:20740076-C-CA | ** | ||||||
| hg19:Y:23009893-C-A hg38:Y:20848007-C-A | ** | ||||||
| hg19:Y:23026671-C-A hg38:Y:20864785-C-A | ** | ||||||
| hg19:Y:23126312-A-T hg38:Y:20964426-A-T | ** | ||||||
| hg19:Y:23625303-T-G hg38:Y:21463417-T-G | ** | ||||||
| hg19:Y:23648176-C-T hg38:Y:21486290-C-T | ** | ||||||
| hg38:Y:21780461-G-T | ** | ||||||
| hg19:Y:24624661-A-G hg38:Y:22478514-A-G | P3_t2 | ** | |||||
| hg19:Y:26834647-G-A hg38:Y:24688500-G-A | P1_g2 | ** | |||||
| hg19:Y:27484326-T-G hg38:Y:25338179-T-G | P1_Y2 | ** | |||||
| hg19:Y:27964977-T-A hg38:Y:25818830-T-A | P1_Y2 | ** | |||||
| hg19:Y:28402128-A-C hg38:Y:26255981-A-C | P1_gr2 | ** | |||||
| hg19:Y:28615475-C-A hg38:Y:26469328-C-A | ** | ||||||
| hg19:Y:28653304-C-A hg38:Y:26507157-C-A | ** | ||||||
| hg19:Y:28668032-A-G hg38:Y:26521885-A-G | ** | ||||||
| hg19:Y:28798076-TGGA-T hg38:Y:26651929-TGGA-T | ** | ||||||
| hg38:Y:56844863-C-T | ** | ||||||
| hg38:Y:56860575-G-T | ** | ||||||
| hg38:Y:56872363-G-T | ** | ||||||
| hg38:Y:10877800-C-A | *** | ||||||
| hg19:Y:22102554-C-A hg38:Y:19940668-C-A | FTB20574 | *** | |||||
| hg38:Y:10928806-TTCCAC-T | *** | ||||||
| hg38:Y:10997097-C-T | *** | ||||||
| hg19:Y:21104437-TAAA-T,TA hg38:Y:18942551-TAAA-T,TA | 22×A | *** | |||||
| hg19:Y:13511687-G-T hg38:Y:11356011-G-T | *** | ||||||
| hg19:Y:14384430-G-T hg38:Y:12263726-G-T | *** | ||||||
| hg38:Y:56846992-C-A | *** | ||||||
| hg38:Y:10748703-A-C | *** | ||||||
| hg38:Y:10950566-C-A | *** | ||||||
| hg38:Y:10780637-T-C | *** | ||||||
| hg19:Y:21068495-C-A hg38:Y:18906609-C-A | *** | ||||||
| hg38:Y:10795059-T-C | *** | ||||||
| hg38:Y:10796673-A-C,T | *** | ||||||
| hg19:Y:15510605-C-A hg38:Y:13398725-C-A | *** | ||||||
| hg19:Y:3829197-C-A hg38:Y:3961156-C-A | *** | ||||||
| hg38:Y:10997134-C-G | *** | ||||||
| hg19:Y:16345137-CTTCTT-C hg38:Y:14233257-CTTCTT-C | *** | ||||||
| hg19:Y:19411711-C-A hg38:Y:17299831-C-A | Y104648 | *** | |||||
| hg19:Y:7128330-G-T hg38:Y:7260289-G-T | *** | ||||||
| hg19:Y:13466131-C-A hg38:Y:11310455-C-A | *** | ||||||
| hg19:Y:7338291-C-A hg38:Y:7470250-C-A | *** | ||||||
| hg19:Y:15468678-CAAAAAAAAA-C hg38:Y:13356798-CAAAAAAAAA-C | 23×A | *** | |||||
| hg19:Y:6644771-AT-A,ATT hg38:Y:6776730-AT-A,ATT | 11×T | *** | |||||
| hg19:Y:7615355-G-T hg38:Y:7747314-G-T | *** | ||||||
| hg19:Y:8690701-T-A hg38:Y:8822660-T-A | *** | ||||||
| hg19:Y:9949192-G-A hg38:Y:10111583-G-A | *** | ||||||
| hg38:Y:10766864-C-A | *** | ||||||
| hg38:Y:10899339-C-A | *** | ||||||
| hg38:Y:10939829-G-C | *** | ||||||
| hg38:Y:10977127-C-T | *** | ||||||
| hg38:Y:10980834-C-A | *** | ||||||
| hg38:Y:11008630-C-A | *** | ||||||
| hg38:Y:11022064-TCTA-T,TC | *** | ||||||
| hg38:Y:11650609-G-T | DYZ17 | *** | |||||
| hg19:Y:13999086-G-T hg38:Y:11878380-G-T | *** | ||||||
| hg19:Y:14066864-T-A hg38:Y:11946158-T-A | *** | ||||||
| hg19:Y:15158380-C-A hg38:Y:13046466-C-A | *** | ||||||
| hg19:Y:15174609-G-A hg38:Y:13062695-G-A | *** | ||||||
| hg19:Y:15477406-A-G hg38:Y:13365526-A-G | *** | ||||||
| hg19:Y:16345134-C-A hg38:Y:14233254-C-A | *** | ||||||
| hg19:Y:16865053-C-A hg38:Y:14753173-C-A | *** | ||||||
| hg19:Y:18197880-G-T hg38:Y:16086000-G-T | *** | ||||||
| hg19:Y:18706964-C-A hg38:Y:16595084-C-A | *** | ||||||
| hg19:Y:19544541-T-C hg38:Y:17432661-T-C | *** | ||||||
| hg19:Y:21084335-GTATATATATA-G hg38:Y:18922449-GTATATATATA-G | 8×TA | *** | |||||
| hg19:Y:22658809-C-A hg38:Y:20496923-C-A | *** | ||||||
| hg19:Y:22770880-C-A hg38:Y:20608994-C-A | *** | ||||||
| hg19:Y:22965317-A-T hg38:Y:20803431-A-T | *** | ||||||
| hg19:Y:23205778-C-A hg38:Y:21043892-C-A | *** | ||||||
| hg19:Y:23380294-C-A hg38:Y:21218408-C-A | *** | ||||||
| hg19:Y:23837077-G-T hg38:Y:21675191-G-T | *** | ||||||
| hg19:Y:23961351-C-A hg38:Y:21815204-C-A | *** | ||||||
| hg19:Y:28610574-G-T hg38:Y:26464427-G-T | *** | ||||||
| hg19:Y:28610629-G-T hg38:Y:26464482-G-T | *** | ||||||
| hg38:Y:56835931-CTCAAT-C,CTCCAT | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 489258 | 9586889 | 7789784 | 7681137 |
| Used in age calculations | 9586889 | 7789784 | 7681137 |
| Counts of SNPs | 1 | 1 |
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