O'Brien
BigY2: 606858MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 606858 |
---|---|---|---|---|---|---|---|
hg19:Y:22286027-G-T hg38:Y:20124141-G-T | DYZ19 | A* | |||||
hg19:Y:13600262-G-C hg38:Y:11444586-G-C | DC863 | + | |||||
hg19:Y:14030633-A-T hg38:Y:11909927-A-T | DC864 | Y | Y | + | |||
hg19:Y:22510680-A-T hg38:Y:20348794-A-T | BY225670 | DYZ19 | + | ||||
hg19:Y:22288257-C-A hg38:Y:20126371-C-A | DYZ19 | * | |||||
hg19:Y:24278270-G-GAA hg38:Y:22132123-G-GAA | P3_b1 | ** | |||||
hg19:Y:13859632-G-A hg38:Y:11738926-G-A | DYZ17 | ** | |||||
hg19:Y:9131177-C-T hg38:Y:9293568-C-T | ** | ||||||
hg19:Y:26100458-T-A hg38:Y:23954311-T-A | FGC15999 | P1_Y1 | ** | ||||
hg19:Y:4557545-C-CA hg38:Y:4689504-C-CA | ** | ||||||
hg19:Y:58988222-C-T hg38:Y:56842075-C-T | ** | ||||||
hg19:Y:13859604-G-A hg38:Y:11738898-G-A | DYZ17 | ** | |||||
hg19:Y:13859615-C-T hg38:Y:11738909-C-T | DYZ17 | ** | |||||
hg19:Y:13859630-G-C hg38:Y:11738924-G-C | DYZ17 | ** | |||||
hg19:Y:13859640-G-A hg38:Y:11738934-G-A | FT130667 | DYZ17 | ** | ||||
hg38:Y:10765237-G-T | ** | ||||||
hg38:Y:10830953-G-A | FGC77151 | ** | |||||
hg38:Y:10747805-T-A | ** | ||||||
hg38:Y:10830916-C-G | ** | ||||||
hg38:Y:10896384-A-T | ** | ||||||
hg38:Y:56850434-A-C | ** | ||||||
hg38:Y:11000429-A-T | ** | ||||||
hg38:Y:10770492-C-G | ** | ||||||
hg38:Y:10825669-T-C | ** | ||||||
hg19:Y:15238010-C-A hg38:Y:13126096-C-A | ** | ||||||
hg38:Y:10860038-C-A | ** | ||||||
hg19:Y:19183915-C-G hg38:Y:17072035-C-G | ** | ||||||
hg38:Y:10834508-T-C | ** | ||||||
hg38:Y:10768147-A-T | ** | ||||||
hg38:Y:10768157-T-A | ** | ||||||
hg38:Y:11033710-C-G | ** | ||||||
hg38:Y:11033718-C-T | ** | ||||||
hg38:Y:10679183-A-T | ** | ||||||
hg19:Y:6106080-A-C hg38:Y:6238039-A-C | ** | ||||||
hg38:Y:10983719-T-A | ** | ||||||
hg38:Y:10983742-C-T | ** | ||||||
hg19:Y:14916807-C-A hg38:Y:12804874-C-A | ** | ||||||
hg19:Y:19883773-G-T hg38:Y:17771893-G-T | P5_Prx | ** | |||||
hg19:Y:28521180-C-A hg38:Y:26375033-C-A | ** | ||||||
hg38:Y:10770477-T-C | ** | ||||||
hg38:Y:10770515-T-A | ** | ||||||
hg38:Y:10770519-A-G | ** | ||||||
hg19:Y:23591019-T-G hg38:Y:21429133-T-G | ** | ||||||
hg38:Y:10656850-C-T | ** | ||||||
hg38:Y:10975838-T-C | ** | ||||||
hg19:Y:13212740-A-G hg38:Y:11057064-A-G | ** | ||||||
hg38:Y:10983692-T-A | ** | ||||||
hg38:Y:10975793-T-C | ** | ||||||
hg38:Y:10975794-T-G | ** | ||||||
hg38:Y:10881272-T-C | ** | ||||||
hg38:Y:10830929-CTAAAA-C | ** | ||||||
hg19:Y:19183516-ATTTTTTT-A hg38:Y:17071636-ATTTTTTT-A | 13×T | ** | |||||
hg19:Y:5204640-C-A hg38:Y:5336599-C-A | ** | ||||||
hg38:Y:10656844-A-T | ** | ||||||
hg38:Y:10656855-C-T | ** | ||||||
hg19:Y:18738108-C-A hg38:Y:16626228-C-A | ** | ||||||
hg19:Y:27398546-G-T hg38:Y:25252399-G-T | P1_g3 | ** | |||||
hg19:Y:27398549-G-T hg38:Y:25252402-G-T | P1_g3 | ** | |||||
hg19:Y:26415697-G-T hg38:Y:24269550-G-T | P1_Y1 | ** | |||||
hg38:Y:10676696-A-C | ** | ||||||
hg19:Y:13472017-TAAGAGAATCCATACAGCA-T hg38:Y:11316341-TAAGAGAATCCATACAGCA-T | ** | ||||||
hg38:Y:10764586-A-T | ** | ||||||
hg38:Y:10764589-C-G | ** | ||||||
hg19:Y:7040206-G-T hg38:Y:7172165-G-T | ** | ||||||
hg38:Y:10971832-C-A | ** | ||||||
hg19:Y:6330228-AC-A hg38:Y:6462187-AC-A | IR3_Dst | ** | |||||
hg19:Y:4919331-G-T hg38:Y:5051290-G-T | ** | ||||||
hg38:Y:11007425-C-A | ** | ||||||
hg38:Y:10891989-A-T | ** | ||||||
hg38:Y:10945119-C-T | ** | ||||||
hg19:Y:14557798-G-T hg38:Y:12445999-G-T | ** | ||||||
hg19:Y:4179020-TAAA-T hg38:Y:4310979-TAAA-T | 17×A | ** | |||||
hg19:Y:15249073-G-GA hg38:Y:13137159-G-GA | 9×A | ** | |||||
hg19:Y:23002859-A-G hg38:Y:20840973-A-G | BY26607 | ** | |||||
hg19:Y:23002861-A-G hg38:Y:20840975-A-G | BY26608 | ** | |||||
hg19:Y:27641706-C-A hg38:Y:25495559-C-A | P1_Y2 | ** | |||||
hg38:Y:10959465-ACTGCT-A | ** | ||||||
hg19:Y:14325110-C-A hg38:Y:12204404-C-A | ** | ||||||
hg38:Y:10679161-G-C | ** | ||||||
hg38:Y:10825657-C-T | ** | ||||||
hg38:Y:10825688-T-A | ** | ||||||
hg19:Y:13890971-C-A hg38:Y:11770265-C-A | ** | ||||||
hg38:Y:10673955-T-A | ** | ||||||
hg38:Y:56845884-C-A | ** | ||||||
hg38:Y:10651914-G-T | ** | ||||||
hg19:Y:22682538-C-G hg38:Y:20520652-C-G | ** | ||||||
hg38:Y:10679129-T-C | ** | ||||||
hg38:Y:10839927-T-A | ** | ||||||
hg38:Y:10693117-C-A | ** | ||||||
hg19:Y:18965891-C-A hg38:Y:16854011-C-A | ** | ||||||
hg19:Y:13919292-C-A hg38:Y:11798586-C-A | ** | ||||||
hg38:Y:10958828-T-C | ** | ||||||
hg38:Y:10983686-T-A | ** | ||||||
hg38:Y:10983687-T-C | ** | ||||||
hg38:Y:11010874-C-T | ** | ||||||
hg38:Y:11010883-T-C | ** | ||||||
hg38:Y:10972317-CCCACT-C | ** | ||||||
hg38:Y:10866890-T-C | ** | ||||||
hg38:Y:10800541-T-A | ** | ||||||
hg19:Y:9566984-TG-T hg38:Y:9729375-TG-T | IR3_Prx | ** | |||||
hg19:Y:21133552-G-T hg38:Y:18971666-G-T | ** | ||||||
hg38:Y:10877702-G-C | ** | ||||||
hg19:Y:8981541-C-A hg38:Y:9143932-C-A | ** | ||||||
hg19:Y:15449883-A-T hg38:Y:13338003-A-T | ** | ||||||
hg19:Y:3409169-C-A hg38:Y:3541128-C-A | FT317123 | ** | |||||
hg38:Y:10769568-A-T | ** | ||||||
hg38:Y:10963387-ACACAC-A | ** | ||||||
hg38:Y:10668641-C-CATGGA | ** | ||||||
hg38:Y:11033337-G-T | ** | ||||||
hg19:Y:8832756-C-A hg38:Y:8964715-C-A | ** | ||||||
hg38:Y:11000415-T-A | ** | ||||||
hg38:Y:10667894-C-A | ** | ||||||
hg19:Y:13490665-C-A hg38:Y:11334989-C-A | ** | ||||||
hg19:Y:5874246-C-A hg38:Y:6006205-C-A | ** | ||||||
hg38:Y:10693514-C-A | ** | ||||||
hg38:Y:11034703-C-T | ** | ||||||
hg38:Y:10958855-C-G | ** | ||||||
hg19:Y:26018408-TG-T hg38:Y:23872261-TG-T | P1_Y1 | ** | |||||
hg19:Y:22205653-A-C hg38:Y:20043767-A-C | ** | ||||||
hg19:Y:5507465-AT-A hg38:Y:5639424-AT-A | 9×T | ** | |||||
hg38:Y:10866869-T-C | ** | ||||||
hg38:Y:10866870-G-T | ** | ||||||
hg38:Y:10866871-T-C | ** | ||||||
hg38:Y:11000183-T-A | ** | ||||||
hg38:Y:10800597-T-C | ** | ||||||
hg19:Y:8665703-C-A hg38:Y:8797662-C-A | ** | ||||||
hg38:Y:10679129-TTCAATTCCAA-T | ** | ||||||
hg19:Y:6240908-T-TC hg38:Y:6372867-T-TC | IR3_Dst | ** | |||||
hg19:Y:23252484-C-A hg38:Y:21090598-C-A | ** | ||||||
hg19:Y:14488688-G-T hg38:Y:12367957-G-T | ** | ||||||
hg19:Y:17004561-C-A hg38:Y:14892681-C-A | ** | ||||||
hg19:Y:14263395-C-A hg38:Y:12142689-C-A | FTB3085 | ** | |||||
hg38:Y:10667384-C-A | ** | ||||||
hg19:Y:21208596-C-A hg38:Y:19046710-C-A | ** | ||||||
hg38:Y:10826953-C-A | ** | ||||||
hg38:Y:10859977-G-T | ** | ||||||
hg38:Y:10877705-C-T | ** | ||||||
hg38:Y:10671599-C-A | ** | ||||||
hg19:Y:5524336-C-A hg38:Y:5656295-C-A | ** | ||||||
hg19:Y:7217275-C-A hg38:Y:7349234-C-A | ** | ||||||
hg38:Y:10924098-C-A | ** | ||||||
hg19:Y:6776304-C-A hg38:Y:6908263-C-A | ** | ||||||
hg19:Y:22199329-C-A hg38:Y:20037443-C-A | ** | ||||||
hg19:Y:9931667-C-A hg38:Y:10094058-C-A | ** | ||||||
hg19:Y:25525621-T-G hg38:Y:23379474-T-G | P1_gr1 | ** | |||||
hg38:Y:10800547-T-C | ** | ||||||
hg38:Y:10800584-G-C | ** | ||||||
hg38:Y:10679164-A-C | ** | ||||||
hg38:Y:10679176-G-A | ** | ||||||
hg38:Y:10679186-C-T | ** | ||||||
hg38:Y:10848129-C-A | ** | ||||||
hg19:Y:18150559-C-A hg38:Y:16038679-C-A | ** | ||||||
hg19:Y:18196173-C-A hg38:Y:16084293-C-A | ** | ||||||
hg38:Y:10982883-T-A | ** | ||||||
hg38:Y:10881252-C-A | ** | ||||||
hg19:Y:24264740-CA-C hg38:Y:22118593-CA-C | P3_b1 | ** | |||||
hg38:Y:10679159-C-T | ** | ||||||
hg19:Y:6977078-C-A hg38:Y:7109037-C-A | ** | ||||||
hg19:Y:21283460-C-A hg38:Y:19121574-C-A | ** | ||||||
hg19:Y:23007739-G-T hg38:Y:20845853-G-T | ** | ||||||
hg19:Y:14988782-C-T hg38:Y:12876848-C-T | ** | ||||||
hg19:Y:21250925-C-A hg38:Y:19089039-C-A | ** | ||||||
hg38:Y:10809467-C-A | ** | ||||||
hg19:Y:7613863-A-C hg38:Y:7745822-A-C | ** | ||||||
hg19:Y:7123653-C-A hg38:Y:7255612-C-A | ** | ||||||
hg38:Y:11000418-C-CCTGGAGTTT | ** | ||||||
hg19:Y:14912103-C-A hg38:Y:12800170-C-A | ** | ||||||
hg19:Y:17218195-C-A hg38:Y:15106315-C-A | ** | ||||||
hg19:Y:6509437-C-A hg38:Y:6641396-C-A | ** | ||||||
hg38:Y:10972069-C-A | ** | ||||||
hg38:Y:10972070-T-C | ** | ||||||
hg38:Y:10972075-T-G | ** | ||||||
hg19:Y:15677735-G-T hg38:Y:13565855-G-T | ** | ||||||
hg19:Y:19183907-C-T hg38:Y:17072027-C-T | ** | ||||||
hg38:Y:10889631-T-A | ** | ||||||
hg19:Y:8100599-C-A hg38:Y:8232558-C-A | ** | ||||||
hg19:Y:14689017-C-A hg38:Y:12577083-C-A | ** | ||||||
hg19:Y:6010221-C-A hg38:Y:6142180-C-A | ** | ||||||
hg19:Y:23425178-C-A hg38:Y:21263292-C-A | ** | ||||||
hg19:Y:23523588-A-G hg38:Y:21361702-A-G | ** | ||||||
hg38:Y:56847038-C-A | ** | ||||||
hg19:Y:5219334-GGAGT-G hg38:Y:5351293-GGAGT-G | ** | ||||||
hg38:Y:56850444-T-A | ** | ||||||
hg19:Y:15927697-C-A hg38:Y:13815817-C-A | ** | ||||||
hg19:Y:17549398-C-A hg38:Y:15437518-C-A | ** | ||||||
hg19:Y:9055385-C-A hg38:Y:9217776-C-A | ** | ||||||
hg19:Y:19625540-A-C hg38:Y:17513660-A-C | P5_Prx | ** | |||||
hg19:Y:2798954-T-C hg38:Y:2930913-T-C | ** | ||||||
hg19:Y:28655584-G-A hg38:Y:26509437-G-A | FT381603 | ** | |||||
hg38:Y:10667891-A-C | ** | ||||||
hg19:Y:2789681-C-A hg38:Y:2921640-C-A | ** | ||||||
hg19:Y:2789693-C-A hg38:Y:2921652-C-A | ** | ||||||
hg19:Y:2789696-C-A hg38:Y:2921655-C-A | ** | ||||||
hg19:Y:2869026-G-T hg38:Y:3000985-G-T | ** | ||||||
hg19:Y:2966370-G-T hg38:Y:3098329-G-T | ** | ||||||
hg19:Y:3011672-C-A hg38:Y:3143631-C-A | ** | ||||||
hg19:Y:3103605-G-T hg38:Y:3235564-G-T | ** | ||||||
hg19:Y:3107167-C-A hg38:Y:3239126-C-A | ** | ||||||
hg19:Y:3107269-C-A hg38:Y:3239228-C-A | ** | ||||||
hg19:Y:3496501-G-T hg38:Y:3628460-G-T | ** | ||||||
hg19:Y:3496990-G-T hg38:Y:3628949-G-T | ** | ||||||
hg19:Y:3661067-T-C hg38:Y:3793026-T-C | ** | ||||||
hg19:Y:3726586-C-A hg38:Y:3858545-C-A | ** | ||||||
hg19:Y:4028156-C-A hg38:Y:4160115-C-A | ** | ||||||
hg19:Y:4209442-G-T hg38:Y:4341401-G-T | ** | ||||||
hg19:Y:4209446-G-T hg38:Y:4341405-G-T | ** | ||||||
hg19:Y:4260337-A-G hg38:Y:4392296-A-G | ** | ||||||
hg19:Y:4409672-G-T hg38:Y:4541631-G-T | ** | ||||||
hg19:Y:4416951-A-G hg38:Y:4548910-A-G | ** | ||||||
hg19:Y:4458050-C-A hg38:Y:4590009-C-A | ** | ||||||
hg19:Y:4461129-G-T hg38:Y:4593088-G-T | ** | ||||||
hg19:Y:4670117-C-A hg38:Y:4802076-C-A | ** | ||||||
hg19:Y:4896092-G-A hg38:Y:5028051-G-A | ** | ||||||
hg19:Y:4896097-C-A hg38:Y:5028056-C-A | ** | ||||||
hg19:Y:4986394-C-A hg38:Y:5118353-C-A | ** | ||||||
hg19:Y:5068762-G-T hg38:Y:5200721-G-T | ** | ||||||
hg19:Y:5543599-C-A hg38:Y:5675558-C-A | ** | ||||||
hg19:Y:5583231-C-A hg38:Y:5715190-C-A | ** | ||||||
hg19:Y:5620236-A-C hg38:Y:5752195-A-C | ** | ||||||
hg19:Y:5713016-C-A hg38:Y:5844975-C-A | ** | ||||||
hg19:Y:5716901-C-A hg38:Y:5848860-C-A | ** | ||||||
hg19:Y:5948079-G-T hg38:Y:6080038-G-T | ** | ||||||
hg19:Y:5969822-C-A hg38:Y:6101781-C-A | ** | ||||||
hg19:Y:6150053-G-T hg38:Y:6282012-G-T | IR3_Dst | ** | |||||
hg19:Y:6479662-G-T hg38:Y:6611621-G-T | ** | ||||||
hg19:Y:6486369-G-T hg38:Y:6618328-G-T | ** | ||||||
hg19:Y:6543153-C-A hg38:Y:6675112-C-A | ** | ||||||
hg19:Y:6580531-C-T hg38:Y:6712490-C-T | ** | ||||||
hg19:Y:6809419-G-A hg38:Y:6941378-G-A | ** | ||||||
hg19:Y:6971736-A-C hg38:Y:7103695-A-C | ** | ||||||
hg19:Y:6995124-C-A hg38:Y:7127083-C-A | ** | ||||||
hg19:Y:7039704-G-T hg38:Y:7171663-G-T | ** | ||||||
hg19:Y:7109019-C-A hg38:Y:7240978-C-A | ** | ||||||
hg19:Y:7134284-C-A hg38:Y:7266243-C-A | ** | ||||||
hg19:Y:7241600-G-T hg38:Y:7373559-G-T | ** | ||||||
hg19:Y:7304427-T-C hg38:Y:7436386-T-C | FT16898 | FT19113 | ** | ||||
hg19:Y:7358188-C-A hg38:Y:7490147-C-A | ** | ||||||
hg19:Y:7381862-T-G hg38:Y:7513821-T-G | ** | ||||||
hg19:Y:7541014-C-A hg38:Y:7672973-C-A | ** | ||||||
hg19:Y:8024989-C-A hg38:Y:8156948-C-A | ** | ||||||
hg19:Y:8078081-A-G hg38:Y:8210040-A-G | ** | ||||||
hg19:Y:8663556-C-CA hg38:Y:8795515-C-CA | ** | ||||||
hg19:Y:8679531-C-A hg38:Y:8811490-C-A | ** | ||||||
hg19:Y:8699221-G-T hg38:Y:8831180-G-T | ** | ||||||
hg19:Y:8723670-C-A hg38:Y:8855629-C-A | ** | ||||||
hg19:Y:8850300-C-A hg38:Y:8982259-C-A | ** | ||||||
hg38:Y:9110071-G-T | ** | ||||||
hg19:Y:9074200-C-A hg38:Y:9236591-C-A | ** | ||||||
hg19:Y:9363494-T-G hg38:Y:9525885-T-G | ** | ||||||
hg19:Y:9446155-G-T hg38:Y:9608546-G-T | ** | ||||||
hg19:Y:9558135-G-T hg38:Y:9720526-G-T | IR3_Prx | ** | |||||
hg19:Y:9798083-G-T hg38:Y:9960474-G-T | ** | ||||||
hg19:Y:9849812-G-T hg38:Y:10012203-G-T | ** | ||||||
hg19:Y:9857228-C-A hg38:Y:10019619-C-A | ** | ||||||
hg19:Y:9885555-C-A hg38:Y:10047946-C-A | ** | ||||||
hg19:Y:9900274-C-A hg38:Y:10062665-C-A | ** | ||||||
hg19:Y:9926769-C-A hg38:Y:10089160-C-A | ** | ||||||
hg19:Y:9936714-G-T hg38:Y:10099105-G-T | ** | ||||||
hg19:Y:10062490-C-G hg38:Y:10224881-C-G | ** | ||||||
hg38:Y:10763256-CTCTCCACTCT-C | ** | ||||||
hg38:Y:10764078-G-T | ** | ||||||
hg38:Y:10767760-C-A | ** | ||||||
hg38:Y:10770425-G-A | ** | ||||||
hg38:Y:10772605-C-A | ** | ||||||
hg38:Y:10774960-C-A | ** | ||||||
hg38:Y:10776742-C-A | ** | ||||||
hg38:Y:10790730-T-C | ** | ||||||
hg38:Y:10795207-C-A | ** | ||||||
hg38:Y:10800520-C-A | ** | ||||||
hg38:Y:10800525-C-G | ** | ||||||
hg38:Y:10800575-C-A | ** | ||||||
hg38:Y:10800583-T-C | ** | ||||||
hg38:Y:10830926-C-A | ** | ||||||
hg38:Y:10830957-C-G | ** | ||||||
hg38:Y:10845382-G-T | ** | ||||||
hg38:Y:10846290-A-G | ** | ||||||
hg38:Y:10851795-C-A | ** | ||||||
hg38:Y:10862674-G-T | ** | ||||||
hg38:Y:10881251-A-T | ** | ||||||
hg38:Y:10881262-C-T | ** | ||||||
hg38:Y:10881278-C-A | ** | ||||||
hg38:Y:10881285-A-T | ** | ||||||
hg38:Y:10924085-C-A | ** | ||||||
hg38:Y:10926935-C-A | ** | ||||||
hg38:Y:10934990-C-A | ** | ||||||
hg38:Y:10938797-C-A | ** | ||||||
hg38:Y:10945101-C-G | ** | ||||||
hg38:Y:10945112-ATTC-A | ** | ||||||
hg38:Y:10958817-A-G | ** | ||||||
hg38:Y:10962690-C-A | FT438359 | ** | |||||
hg38:Y:10962852-C-A | ** | ||||||
hg38:Y:10982165-A-G | ** | ||||||
hg38:Y:11000552-C-A | ** | ||||||
hg38:Y:11010888-C-T | ** | ||||||
hg38:Y:11017683-T-A | ** | ||||||
hg38:Y:11021138-T-C | ** | ||||||
hg19:Y:13221899-A-C hg38:Y:11066223-A-C | ** | ||||||
hg19:Y:13222116-G-A hg38:Y:11066440-G-A | ** | ||||||
hg19:Y:13255679-CT-C hg38:Y:11100003-CT-C | ** | ||||||
hg19:Y:13255932-C-A hg38:Y:11100256-C-A | ** | ||||||
hg19:Y:13263476-C-A hg38:Y:11107800-C-A | ** | ||||||
hg19:Y:13441618-C-A hg38:Y:11285942-C-A | ** | ||||||
hg19:Y:13460608-T-C hg38:Y:11304932-T-C | ** | ||||||
hg19:Y:13460615-A-G hg38:Y:11304939-A-G | ** | ||||||
hg19:Y:13486679-T-G hg38:Y:11331003-T-G | ** | ||||||
hg19:Y:13594876-G-T hg38:Y:11439200-G-T | ** | ||||||
hg19:Y:13748324-A-C hg38:Y:11592648-A-C | DYZ17 | ** | |||||
hg38:Y:11669759-G-C | DYZ17 | ** | |||||
hg19:Y:13856821-G-A hg38:Y:11736115-G-A | FT174890 | DYZ17 | ** | ||||
hg19:Y:13937881-C-A hg38:Y:11817175-C-A | ** | ||||||
hg19:Y:13960289-C-A hg38:Y:11839583-C-A | ** | ||||||
hg19:Y:13962043-T-TG hg38:Y:11841337-T-TG | ** | ||||||
hg19:Y:13975599-C-A hg38:Y:11854893-C-A | ** | ||||||
hg19:Y:13999171-A-C hg38:Y:11878465-A-C | ** | ||||||
hg19:Y:14034971-A-G hg38:Y:11914265-A-G | ** | ||||||
hg19:Y:14071465-C-A hg38:Y:11950759-C-A | ** | ||||||
hg19:Y:14239671-G-T hg38:Y:12118965-G-T | ** | ||||||
hg19:Y:14359937-AG-A hg38:Y:12239232-AG-A | ** | ||||||
hg19:Y:14362034-G-T hg38:Y:12241329-G-T | ** | ||||||
hg19:Y:14488690-C-T hg38:Y:12367959-C-T | ** | ||||||
hg19:Y:14506749-A-C hg38:Y:12394954-A-C | ** | ||||||
hg19:Y:14600020-C-T hg38:Y:12488220-C-T | ** | ||||||
hg19:Y:14722517-A-C hg38:Y:12610585-A-C | ** | ||||||
hg19:Y:14988762-A-C hg38:Y:12876828-A-C | ** | ||||||
hg19:Y:14988763-T-C hg38:Y:12876829-T-C | ** | ||||||
hg19:Y:14988766-T-G hg38:Y:12876832-T-G | ** | ||||||
hg19:Y:14988769-C-T hg38:Y:12876835-C-T | ** | ||||||
hg19:Y:15070604-G-T hg38:Y:12958695-G-T | ** | ||||||
hg19:Y:15306221-C-A hg38:Y:13194323-C-A | ** | ||||||
hg19:Y:15312784-C-A hg38:Y:13200889-C-A | ** | ||||||
hg19:Y:15320758-G-C hg38:Y:13208876-G-C | ** | ||||||
hg19:Y:15324929-C-A hg38:Y:13213047-C-A | ** | ||||||
hg19:Y:15449888-A-T hg38:Y:13338008-A-T | ** | ||||||
hg19:Y:15569630-C-A hg38:Y:13457750-C-A | ** | ||||||
hg19:Y:15652971-C-A hg38:Y:13541091-C-A | ** | ||||||
hg19:Y:15710367-C-A hg38:Y:13598487-C-A | ** | ||||||
hg19:Y:15789610-A-T hg38:Y:13677730-A-T | ** | ||||||
hg19:Y:15790059-C-A hg38:Y:13678179-C-A | ** | ||||||
hg19:Y:15828574-C-T hg38:Y:13716694-C-T | ** | ||||||
hg19:Y:15828575-A-G hg38:Y:13716695-A-G | ** | ||||||
hg19:Y:15862987-C-T hg38:Y:13751107-C-T | ** | ||||||
hg19:Y:15917633-A-C hg38:Y:13805753-A-C | 9×T | ** | |||||
hg19:Y:15937272-G-T hg38:Y:13825392-G-T | ** | ||||||
hg19:Y:15971631-C-A hg38:Y:13859751-C-A | ** | ||||||
hg19:Y:16118545-G-T hg38:Y:14006665-G-T | P8_Prx | ** | |||||
hg19:Y:16272190-C-A hg38:Y:14160310-C-A | ** | ||||||
hg19:Y:16284319-C-A hg38:Y:14172439-C-A | ** | ||||||
hg19:Y:16384473-G-T hg38:Y:14272593-G-T | ** | ||||||
hg19:Y:16394377-A-C hg38:Y:14282497-A-C | ** | ||||||
hg19:Y:16430618-G-T hg38:Y:14318738-G-T | ** | ||||||
hg19:Y:16466820-G-T hg38:Y:14354940-G-T | ** | ||||||
hg19:Y:16623681-A-C hg38:Y:14511801-A-C | ** | ||||||
hg19:Y:16952445-C-A hg38:Y:14840565-C-A | ** | ||||||
hg19:Y:17004445-C-A hg38:Y:14892565-C-A | ** | ||||||
hg19:Y:17098337-C-A hg38:Y:14986457-C-A | ** | ||||||
hg19:Y:17302096-C-A hg38:Y:15190216-C-A | ** | ||||||
hg19:Y:17546263-A-T hg38:Y:15434383-A-T | ** | ||||||
hg19:Y:17630864-C-A hg38:Y:15518984-C-A | ** | ||||||
hg19:Y:17831291-G-T hg38:Y:15719411-G-T | ** | ||||||
hg19:Y:17863395-T-C hg38:Y:15751515-T-C | ** | ||||||
hg19:Y:17963961-C-A hg38:Y:15852081-C-A | ** | ||||||
hg19:Y:18317622-G-T hg38:Y:16205742-G-T | P6_Prx | ** | |||||
hg19:Y:18742328-C-A hg38:Y:16630448-C-A | ** | ||||||
hg19:Y:18744154-G-A hg38:Y:16632274-G-A | ** | ||||||
hg19:Y:19228932-C-A hg38:Y:17117052-C-A | ** | ||||||
hg19:Y:19298130-G-T hg38:Y:17186250-G-T | ** | ||||||
hg19:Y:19312299-C-A hg38:Y:17200419-C-A | ** | ||||||
hg19:Y:19464421-C-A hg38:Y:17352541-C-A | ** | ||||||
hg19:Y:19674359-T-G hg38:Y:17562479-T-G | P5_Prx | ** | |||||
hg19:Y:19678790-C-A hg38:Y:17566910-C-A | P5_Prx | ** | |||||
hg19:Y:19791519-C-A hg38:Y:17679639-C-A | P5_Prx | ** | |||||
hg19:Y:19873574-T-C hg38:Y:17761694-T-C | P5_Prx | ** | |||||
hg19:Y:19883726-C-A hg38:Y:17771846-C-A | P5_Prx | ** | |||||
hg19:Y:19883786-C-A hg38:Y:17771906-C-A | P5_Prx | ** | |||||
hg19:Y:19883800-C-A hg38:Y:17771920-C-A | P5_Prx | ** | |||||
hg19:Y:19902657-A-AC hg38:Y:17790777-A-AC | P5_Prx | ** | |||||
hg19:Y:19920158-G-T hg38:Y:17808278-G-T | P5_Prx | ** | |||||
hg19:Y:19920180-G-T hg38:Y:17808300-G-T | P5_Prx | ** | |||||
hg19:Y:20199390-A-T hg38:Y:18037504-A-T | P5_Dst | ** | |||||
hg19:Y:20216487-G-A hg38:Y:18054601-G-A | P5_Dst | ** | |||||
hg19:Y:20769566-A-C hg38:Y:18607680-A-C | P4_Prx | ** | |||||
hg19:Y:21106764-G-T hg38:Y:18944878-G-T | ** | ||||||
hg19:Y:21212376-C-A hg38:Y:19050490-C-A | ** | ||||||
hg19:Y:21212850-C-A hg38:Y:19050964-C-A | ** | ||||||
hg19:Y:21285488-CT-C hg38:Y:19123602-CT-C | ** | ||||||
hg19:Y:21325612-T-A hg38:Y:19163726-T-A | ** | ||||||
hg19:Y:21435417-G-GAGT hg38:Y:19273531-G-GAGT | ** | ||||||
hg19:Y:21435419-CCTT-C hg38:Y:19273533-CCTT-C | ** | ||||||
hg19:Y:21556985-C-A hg38:Y:19395099-C-A | ** | ||||||
hg19:Y:21617792-G-T hg38:Y:19455906-G-T | ** | ||||||
hg19:Y:21692080-C-A hg38:Y:19530194-C-A | ** | ||||||
hg19:Y:21747615-C-G hg38:Y:19585729-C-G | ** | ||||||
hg19:Y:21791636-G-T hg38:Y:19629750-G-T | FTA32816 | ** | |||||
hg19:Y:21950248-C-A hg38:Y:19788362-C-A | ** | ||||||
hg19:Y:22018184-C-A hg38:Y:19856298-C-A | ** | ||||||
hg19:Y:22165164-C-A hg38:Y:20003278-C-A | ** | ||||||
hg19:Y:22508694-T-A hg38:Y:20346808-T-A | DYZ19 | ** | |||||
hg19:Y:22980583-A-C hg38:Y:20818697-A-C | ** | ||||||
hg19:Y:23196274-C-A hg38:Y:21034388-C-A | ** | ||||||
hg19:Y:23201392-C-A hg38:Y:21039506-C-A | ** | ||||||
hg19:Y:23243117-A-G hg38:Y:21081231-A-G | ** | ||||||
hg19:Y:23273962-C-A hg38:Y:21112076-C-A | ** | ||||||
hg19:Y:23521170-G-T hg38:Y:21359284-G-T | ** | ||||||
hg19:Y:23523616-T-C hg38:Y:21361730-T-C | FTA27720 | ** | |||||
hg19:Y:23523618-G-T hg38:Y:21361732-G-T | ** | ||||||
hg19:Y:23523628-T-C hg38:Y:21361742-T-C | ** | ||||||
hg19:Y:23523632-T-C hg38:Y:21361746-T-C | ** | ||||||
hg19:Y:24108337-A-T hg38:Y:21962190-A-T | P3_b1 | ** | |||||
hg19:Y:24409354-G-T hg38:Y:22263207-G-T | ** | ||||||
hg19:Y:24409626-G-T hg38:Y:22263479-G-T | ** | ||||||
hg19:Y:24458720-C-A hg38:Y:22312573-C-A | ** | ||||||
hg19:Y:25849123-C-A hg38:Y:23702976-C-A | P1_Y1 | ** | |||||
hg19:Y:26078954-G-T hg38:Y:23932807-G-T | P1_Y1 | ** | |||||
hg19:Y:26656756-A-G hg38:Y:24510609-A-G | P1_g2 | ** | |||||
hg19:Y:27946733-G-A hg38:Y:25800586-G-A | P1_Y2 | ** | |||||
hg19:Y:27966838-T-TAC hg38:Y:25820691-T-TAC | P1_Y2 | ** | |||||
hg19:Y:28743308-G-T hg38:Y:26597161-G-T | ** | ||||||
hg19:Y:28782909-G-A hg38:Y:26636762-G-A | ** | ||||||
hg38:Y:56839769-C-A | ** | ||||||
hg38:Y:56850443-C-G | ** | ||||||
hg38:Y:56850457-A-C | ** | ||||||
hg38:Y:56850463-G-T | ** | ||||||
hg19:Y:13478256-CGAG-C,TGCG hg38:Y:11322580-CGAG-C,TGCG | *** | ||||||
hg19:Y:13460568-G-A hg38:Y:11304892-G-A | *** | ||||||
hg38:Y:10770620-C-T | *** | ||||||
hg38:Y:10796667-C-A | *** | ||||||
hg19:Y:21690909-CAA-C,CA hg38:Y:19529023-CAA-C,CA | 14×A | *** | |||||
hg38:Y:10776519-T-A | *** | ||||||
hg19:Y:16913444-G-A hg38:Y:14801564-G-A | *** | ||||||
hg19:Y:16910556-C-A hg38:Y:14798676-C-A | *** | ||||||
hg19:Y:2979296-CT-C,CTT hg38:Y:3111255-CT-C,CTT | 15×T | *** | |||||
hg19:Y:22133159-C-A hg38:Y:19971273-C-A | *** | ||||||
hg19:Y:22849491-CTTTTTT-C hg38:Y:20687605-CTTTTTT-C | 20×T | *** | |||||
hg19:Y:23327255-C-A hg38:Y:21165369-C-A | *** | ||||||
hg19:Y:18831700-C-A hg38:Y:16719820-C-A | *** | ||||||
hg19:Y:21369451-T-C hg38:Y:19207565-T-C | *** | ||||||
hg38:Y:56844011-A-G | *** | ||||||
hg19:Y:23063230-C-A hg38:Y:20901344-C-A | *** | ||||||
hg38:Y:10974182-C-A | FT438738 | *** | |||||
hg19:Y:22815505-G-GTT hg38:Y:20653619-G-GTT | 20×T | *** | |||||
hg19:Y:9929945-C-A hg38:Y:10092336-C-A | *** | ||||||
hg19:Y:18769329-CT-C hg38:Y:16657449-CT-C | 9×T | *** | |||||
hg38:Y:56844419-C-G | *** | ||||||
hg19:Y:13460579-A-G hg38:Y:11304903-A-G | *** | ||||||
hg19:Y:13453667-C-G hg38:Y:11297991-C-G | *** | ||||||
hg19:Y:19531307-C-A hg38:Y:17419427-C-A | *** | ||||||
hg38:Y:10999856-T-A | *** | ||||||
hg19:Y:8427464-C-A hg38:Y:8559423-C-A | *** | ||||||
hg19:Y:23804538-C-A hg38:Y:21642652-C-A | *** | ||||||
hg38:Y:11020267-C-A | *** | ||||||
hg19:Y:6741273-A-G hg38:Y:6873232-A-G | *** | ||||||
hg38:Y:10682731-C-A | *** | ||||||
hg19:Y:13460565-A-G hg38:Y:11304889-A-G | *** | ||||||
hg19:Y:13460581-G-T hg38:Y:11304905-G-T | *** | ||||||
hg19:Y:21162386-G-A hg38:Y:19000500-G-A | *** | ||||||
hg19:Y:21291328-C-A hg38:Y:19129442-C-A | *** | ||||||
hg19:Y:2695789-C-A hg38:Y:2827748-C-A | *** | ||||||
hg19:Y:3500844-CT-C hg38:Y:3632803-CT-C | 9×T | *** | |||||
hg19:Y:4567248-G-T hg38:Y:4699207-G-T | *** | ||||||
hg19:Y:7608485-C-A hg38:Y:7740444-C-A | *** | ||||||
hg19:Y:7656776-G-T hg38:Y:7788735-G-T | *** | ||||||
hg19:Y:7867927-A-G hg38:Y:7999886-A-G | *** | ||||||
hg19:Y:8170129-A-G hg38:Y:8302088-A-G | *** | ||||||
hg19:Y:8734434-C-A hg38:Y:8866393-C-A | *** | ||||||
hg19:Y:9809992-C-A hg38:Y:9972383-C-A | *** | ||||||
hg38:Y:10655909-C-A | *** | ||||||
hg38:Y:10754911-CCACGC-C,CCATTA | *** | ||||||
hg38:Y:10760374-CCATTC-C,CCTTTG | *** | ||||||
hg38:Y:10770634-T-A,TCAA | *** | ||||||
hg38:Y:10773333-C-A | *** | ||||||
hg38:Y:10944608-C-A | *** | ||||||
hg38:Y:10982401-C-A | *** | ||||||
hg38:Y:10988749-C-A | *** | ||||||
hg38:Y:10999658-C-A | *** | ||||||
hg38:Y:11017771-C-A | *** | ||||||
hg19:Y:13271023-G-T hg38:Y:11115347-G-T | *** | ||||||
hg19:Y:13453660-T-TTGCAATCGAGTTGAA hg38:Y:11297984-T-TTGCAATCGAGTTGAA | *** | ||||||
hg19:Y:13853678-C-T hg38:Y:11732972-C-T | DYZ17 | *** | |||||
hg19:Y:14124229-C-A hg38:Y:12003523-C-A | *** | ||||||
hg19:Y:14232541-C-A hg38:Y:12111835-C-A | *** | ||||||
hg19:Y:14557964-C-A hg38:Y:12446165-C-A | *** | ||||||
hg19:Y:14807838-C-A hg38:Y:12695909-C-A | *** | ||||||
hg19:Y:14969040-C-A hg38:Y:12857115-C-A | *** | ||||||
hg19:Y:16414402-C-A hg38:Y:14302522-C-A | *** | ||||||
hg19:Y:16986908-C-A hg38:Y:14875028-C-A | *** | ||||||
hg19:Y:17279427-C-A hg38:Y:15167547-C-A | *** | ||||||
hg19:Y:17294664-C-A hg38:Y:15182784-C-A | *** | ||||||
hg19:Y:18740684-C-A hg38:Y:16628804-C-A | *** | ||||||
hg19:Y:18871890-C-A hg38:Y:16760010-C-A | *** | ||||||
hg19:Y:21604299-C-A hg38:Y:19442413-C-A | *** | ||||||
hg19:Y:22133135-C-A hg38:Y:19971249-C-A | *** | ||||||
hg19:Y:22293838-C-A hg38:Y:20131952-C-A | DYZ19 | *** | |||||
hg19:Y:23484578-T-C hg38:Y:21322692-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 606858 | 9168873 | 7468944 | 7387678 |
Used in age calculations | 9168873 | 7468944 | 7387678 |
Counts of SNPs | 1 | 1 |
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