Amos
BigY2: N18935MDKA Birth: Germany
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 N18935 |
---|---|---|---|---|---|---|---|---|
6267692-A-G | 6399651-A-G | IR3_Dst | A* | |||||
28817382-C-T | 26671235-C-T | A* | ||||||
18378987-TG-T | 16267107-TG-T | P6_Prx | ** | |||||
27417794-A-C | 25271647-A-C | FGC78733 | P1_g3 | ** | ||||
8075929-A-T | 8207888-A-T | ** | ||||||
22537274-GC-G | 20375388-GC-G | ** | ||||||
9540266-A-G | 9702657-A-G | IR3_Prx | ** | |||||
13461022-A-T | 11305346-A-T | ** | ||||||
20252774-G-T | 18090888-G-T | P5_Dst | ** | |||||
5387430-CAAAAA-C | 5519389-CAAAAA-C | 18×A | ** | |||||
13473829-C-T | 11318153-C-T | ** | ||||||
28767801-C-A | 26621654-C-A | ** | ||||||
16309275-T-A | 14197395-T-A | ** | ||||||
10827916-A-C | ** | |||||||
10827949-C-CCACTA | ** | |||||||
10827953-T-A | ** | |||||||
13461047-G-T | 11305371-G-T | ** | ||||||
22659707-C-A | 20497821-C-A | ** | ||||||
56830368-C-A | ** | |||||||
8075936-C-T | 8207895-C-T | FTB15842 | 17×T | ** | ||||
23434222-TA-T | 21272336-TA-T | 9×A | ** | |||||
6086015-C-A | 6217974-C-A | ** | ||||||
10988774-T-C | ** | |||||||
23098809-T-C | 20936923-T-C | ** | ||||||
24884190-A-G | 22738043-A-G | g1 | ** | |||||
10831561-C-A | ** | |||||||
10831562-A-C | ** | |||||||
20332149-T-C | 18170263-T-C | P5_Dst | ** | |||||
22760740-C-A | 20598854-C-A | ** | ||||||
10772658-T-C | ** | |||||||
19052096-C-A | 16940216-C-A | ** | ||||||
11012264-T-A | ** | |||||||
16528225-C-A | 14416345-C-A | ** | ||||||
10667018-C-CTATT | ** | |||||||
10667019-C-CGAATTA | ** | |||||||
21201306-C-A | 19039420-C-A | ** | ||||||
15932311-C-A | 13820431-C-A | ** | ||||||
18645973-C-A | 16534093-C-A | ** | ||||||
16462645-C-A | 14350765-C-A | ** | ||||||
19745037-C-A | 17633157-C-A | P5_Prx | ** | |||||
14832120-C-A | 12720187-C-A | ** | ||||||
11000410-T-C | ** | |||||||
22018125-C-A | 19856239-C-A | FTA27085 | ** | |||||
17030751-A-C | 14918871-A-C | ** | ||||||
13861055-G-T | 11740349-G-T | ** | ||||||
23425259-C-A | 21263373-C-A | ** | ||||||
13457707-A-G | 11302031-A-G | ** | ||||||
4075793-G-T | 4207752-G-T | ** | ||||||
4898069-C-A | 5030028-C-A | ** | ||||||
15201537-C-A | 13089623-C-A | ** | ||||||
14067800-A-T | 11947094-A-T | ** | ||||||
10827972-C-T | FGC79309 | ** | ||||||
18780583-C-A | 16668703-C-A | ** | ||||||
19449216-C-A | 17337336-C-A | ** | ||||||
11034877-G-A | ** | |||||||
4900829-G-T | 5032788-G-T | ** | ||||||
15336012-T-C | 13224130-T-C | ** | ||||||
18959212-C-A | 16847332-C-A | ** | ||||||
7160455-C-A | 7292414-C-A | ** | ||||||
28703177-C-A | 26557030-C-A | ** | ||||||
24512392-C-A | 22366245-C-A | ** | ||||||
11000435-T-TTCTGG | ** | |||||||
11000460-T-C | ** | |||||||
13269273-C-A | 11113597-C-A | ** | ||||||
11012257-G-C | ** | |||||||
10755072-A-C | ** | |||||||
56841597-G-T | ** | |||||||
7336259-C-A | 7468218-C-A | ** | ||||||
22598772-T-A | 20436886-T-A | ** | ||||||
18908082-ATGTG-A | 16796202-ATGTG-A | 14×TG | ** | |||||
10930114-A-C | ** | |||||||
16519316-C-A | 14407436-C-A | 15×A | ** | |||||
6457789-C-A | 6589748-C-A | ** | ||||||
4374356-C-A | 4506315-C-A | ** | ||||||
14118240-A-T | 11997534-A-T | ** | ||||||
6822556-C-A | 6954515-C-A | ** | ||||||
14080142-G-T | 11959436-G-T | ** | ||||||
2980254-C-A | 3112213-C-A | ** | ||||||
18810873-C-A | 16698993-C-A | ** | ||||||
14557051-C-A | 12445252-C-A | ** | ||||||
21863088-T-C | 19701202-T-C | ** | ||||||
10759853-T-C | ** | |||||||
16450333-C-A | 14338453-C-A | ** | ||||||
9652160-A-ATT | 9814551-A-ATT | IR3_Prx | ** | |||||
14118219-T-C | 11997513-T-C | ** | ||||||
9978437-G-T | 10140828-G-T | ** | ||||||
19127625-T-A | 17015745-T-A | ** | ||||||
21426958-T-A | 19265072-T-A | ** | ||||||
22446902-C-A | 20285016-C-A | DYZ19 | ** | |||||
56845905-C-A | ** | |||||||
19231344-G-TT | 17119464-G-TT | ** | ||||||
18566158-C-A | 16454278-C-A | ** | ||||||
6816684-C-A | 6948643-C-A | ** | ||||||
4093478-C-A | 4225437-C-A | ** | ||||||
8269788-C-A | 8401747-C-A | ** | ||||||
17118384-G-T | 15006504-G-T | ** | ||||||
27618307-C-T | 25472160-C-T | P1_Y2 | ** | |||||
18554333-CT-C | 16442453-CT-C | ** | ||||||
22598761-T-A | 20436875-T-A | ** | ||||||
8100477-AG-A | 8232436-AG-A | ** | ||||||
5708441-C-A | 5840400-C-A | ** | ||||||
3759272-C-A | 3891231-C-A | ** | ||||||
23625692-T-TA | 21463806-T-TA | 9×A | ** | |||||
13596342-G-A | 11440666-G-A | ** | ||||||
56756960-G-T | ** | |||||||
19206730-G-T | 17094850-G-T | ** | ||||||
10760689-A-T | ** | |||||||
24317-G-T | ** | |||||||
15399442-C-A | 13287562-C-A | ** | ||||||
5188687-C-A | 5320646-C-A | ** | ||||||
22517145-T-C | 20355259-T-C | ** | ||||||
28583125-C-A | 26436978-C-A | ** | ||||||
17940182-C-A | 15828302-C-A | ** | ||||||
7861099-C-A | 7993058-C-A | ** | ||||||
22084726-G-A | 19922840-G-A | ** | ||||||
3544614-C-A | 3676573-C-A | ** | ||||||
7038418-C-A | 7170377-C-A | ** | ||||||
15922327-G-T | 13810447-G-T | ** | ||||||
21853606-T-A | 19691720-T-A | ** | ||||||
15126194-C-A | 13014281-C-A | ** | ||||||
21888439-C-A | 19726553-C-A | ** | ||||||
15115350-C-A | 13003437-C-A | FTB43627 | ** | |||||
7135121-G-A | 7267080-G-A | ** | ||||||
16232297-C-A | 14120417-C-A | ** | ||||||
17117423-AT-A | 15005543-AT-A | 9×T | ** | |||||
5761072-C-A | 5893031-C-A | ** | ||||||
10815333-C-A | ** | |||||||
11034904-G-A | ** | |||||||
19677905-C-CGCA | 17566025-C-CGCA | P5_Prx | ** | |||||
16037227-C-A | 13925347-C-A | ** | ||||||
15717886-C-A | 13606006-C-A | ** | ||||||
16666121-C-T | 14554241-C-T | ** | ||||||
4065899-C-A | 4197858-C-A | ** | ||||||
16075064-C-A | 13963184-C-A | ** | ||||||
28765141-C-A | 26618994-C-A | ** | ||||||
11030743-T-A | ** | |||||||
28505647-C-A | 26359500-C-A | ** | ||||||
10010559-C-A | 10172950-C-A | ** | ||||||
7109518-C-A | 7241477-C-A | ** | ||||||
10980559-C-A | ** | |||||||
21392512-A-G | 19230626-A-G | ** | ||||||
11037977-C-A | ** | |||||||
18728685-C-A | 16616805-C-A | ** | ||||||
14609798-TC-T | 12498000-TC-T | ** | ||||||
22529461-C-A | 20367575-C-A | ** | ||||||
2832800-C-A | 2964759-C-A | ** | ||||||
14612746-C-A | 12500944-C-A | ** | ||||||
8075924-G-T | 8207883-G-T | ** | ||||||
6645506-C-A | 6777465-C-A | ** | ||||||
17152790-C-A | 15040910-C-A | ** | ||||||
23007273-T-C | 20845387-T-C | ** | ||||||
3599548-C-A | 3731507-C-A | ** | ||||||
6874531-C-A | 7006490-C-A | ** | ||||||
28754915-C-A | 26608768-C-A | ** | ||||||
24468936-C-A | 22322789-C-A | ** | ||||||
16275393-C-A | 14163513-C-A | ** | ||||||
28775379-C-A | 26629232-C-A | ** | ||||||
22167305-C-A | 20005419-C-A | ** | ||||||
8016965-AG-A | 8148924-AG-A | ** | ||||||
16428171-C-CT | 14316291-C-CT | ** | ||||||
22798127-G-T | 20636241-G-T | ** | ||||||
10772705-C-G | ** | |||||||
5059679-C-G | 5191638-C-G | ** | ||||||
10763243-C-A | ** | |||||||
5412475-C-A | 5544434-C-A | ** | ||||||
10772641-C-A | ** | |||||||
6886763-C-A | 7018722-C-A | ** | ||||||
13298014-C-A | 11142338-C-A | ** | ||||||
13298563-C-A | 11142887-C-A | ** | ||||||
2986011-C-A | 3117970-C-A | ** | ||||||
15171470-C-A | 13059556-C-A | ** | ||||||
8669753-C-A | 8801712-C-A | ** | ||||||
24264599-C-A | 22118452-C-A | P3_b1 | ** | |||||
4241864-C-A | 4373823-C-A | FT113484 | ** | |||||
28612248-C-A | 26466101-C-A | ** | ||||||
28687383-C-A | 26541236-C-A | ** | ||||||
13258554-T-G | 11102878-T-G | ** | ||||||
8799718-C-A | 8931677-C-A | ** | ||||||
20339735-T-TC | 18177849-T-TC | P5_Dst | ** | |||||
28659381-C-A | 26513234-C-A | ** | ||||||
22776905-C-A | 20615019-C-A | ** | ||||||
7063954-C-A | 7195913-C-A | ** | ||||||
11034846-C-A | ** | |||||||
14118232-A-G | 11997526-A-G | ** | ||||||
16309050-C-A | 14197170-C-A | ** | ||||||
10750885-A-G | ** | |||||||
11030747-C-T | ** | |||||||
19787551-C-A | 17675671-C-A | P5_Prx | ** | |||||
28609477-A-G | 26463330-A-G | ** | ||||||
28609484-A-T | 26463337-A-T | ** | ||||||
5127917-C-A | 5259876-C-A | ** | ||||||
18166070-C-A | 16054190-C-A | ** | ||||||
21503218-C-A | 19341332-C-A | ** | ||||||
9201278-C-A | 9363669-C-A | ** | ||||||
5274899-G-T | 5406858-G-T | ** | ||||||
7579015-C-A | 7710974-C-A | ** | ||||||
15358676-T-A | 13246795-T-A | ** | ||||||
16018275-C-A | 13906395-C-A | ** | ||||||
23052497-C-A | 20890611-C-A | ** | ||||||
24518104-C-A | 22371957-C-A | ** | ||||||
10772660-C-A | ** | |||||||
21154593-C-A | 18992707-C-A | ** | ||||||
15336018-TC-A | 13224136-TC-A | ** | ||||||
9732890-C-A | 9895281-C-A | IR3_Prx | ** | |||||
22176227-C-A | 20014341-C-A | ** | ||||||
20433677-G-T | 18271791-G-T | P5_Dst | ** | |||||
17093678-C-A | 14981798-C-A | ** | ||||||
16930029-C-A | 14818149-C-A | ** | ||||||
10997968-C-A | ** | |||||||
13457718-T-TTACAA | 11302042-T-TTACAA | ** | ||||||
16490845-C-A | 14378965-C-A | ** | ||||||
10889803-T-G | ** | |||||||
11034815-A-ACTCCC | ** | |||||||
6012747-C-A | 6144706-C-A | ** | ||||||
16629356-A-T | 14517476-A-T | ** | ||||||
21476428-T-A | 19314542-T-A | ** | ||||||
8736883-C-A | 8868842-C-A | ** | ||||||
23184405-C-A | 21022519-C-A | ** | ||||||
16717343-C-A | 14605463-C-A | ** | ||||||
5443902-C-A | 5575861-C-A | ** | ||||||
2791493-C-A | 2923452-C-A | ** | ||||||
18810893-C-A | 16699013-C-A | ** | ||||||
28609486-A-T | 26463339-A-T | ** | ||||||
22613884-C-A | 20451998-C-A | ** | ||||||
19129345-C-A | 17017465-C-A | ** | ||||||
16232481-C-A | 14120601-C-A | ** | ||||||
2689493-C-G | 2821452-C-G | ** | ||||||
2738909-C-T | 2870868-C-T | ** | ||||||
2921314-G-T | 3053273-G-T | ** | ||||||
2980227-G-A | 3112186-G-A | ** | ||||||
2986001-C-G | 3117960-C-G | ** | ||||||
2994661-G-T | 3126620-G-T | ** | ||||||
3088388-A-G | 3220347-A-G | ** | ||||||
3111738-TC-T | 3243697-TC-T | ** | ||||||
3310267-C-A | 3442226-C-A | ** | ||||||
3323568-C-A | 3455527-C-A | ** | ||||||
3385986-G-T | 3517945-G-T | ** | ||||||
3528194-G-T | 3660153-G-T | ** | ||||||
3528202-G-T | 3660161-G-T | ** | ||||||
3605946-T-A | 3737905-T-A | ** | ||||||
3912611-T-C | 4044570-T-C | ** | ||||||
4171889-C-A | 4303848-C-A | ** | ||||||
4175049-C-T | 4307008-C-T | ** | ||||||
4243662-A-T | 4375621-A-T | ** | ||||||
4261870-C-A | 4393829-C-A | ** | ||||||
4350191-A-C | 4482150-A-C | ** | ||||||
4362142-T-A | 4494101-T-A | ** | ||||||
4467045-C-A | 4599004-C-A | ** | ||||||
4540555-G-T | 4672514-G-T | ** | ||||||
4540727-AG-A | 4672686-AG-A | ** | ||||||
4584872-C-A | 4716831-C-A | ** | ||||||
4757178-A-C | 4889137-A-C | ** | ||||||
4931563-C-A | 5063522-C-A | ** | ||||||
5059410-A-C | 5191369-A-C | ** | ||||||
5065439-A-G | 5197398-A-G | ** | ||||||
5084263-A-G | 5216222-A-G | ** | ||||||
5127056-T-A | 5259015-T-A | ** | ||||||
5200311-A-G | 5332270-A-G | ** | ||||||
5201047-G-T | 5333006-G-T | ** | ||||||
5221167-C-T | 5353126-C-T | ** | ||||||
5231537-C-A | 5363496-C-A | ** | ||||||
5242688-T-C | 5374647-T-C | ** | ||||||
5292022-C-T | 5423981-C-T | ** | ||||||
5336882-C-G | 5468841-C-G | ** | ||||||
5361978-C-A | 5493937-C-A | ** | ||||||
5461698-C-T | 5593657-C-T | ** | ||||||
5461706-C-G | 5593665-C-G | ** | ||||||
5800228-T-G | 5932187-T-G | ** | ||||||
5910461-T-A | 6042420-T-A | ** | ||||||
5948950-G-A | 6080909-G-A | ** | ||||||
5948951-G-A | 6080910-G-A | ** | ||||||
5999449-C-A | 6131408-C-A | ** | ||||||
6010542-C-A | 6142501-C-A | ** | ||||||
6069322-C-A | 6201281-C-A | ** | ||||||
6177420-TC-A | 6309379-TC-A | IR3_Dst | ** | |||||
6374211-G-T | 6506170-G-T | ** | ||||||
6455370-C-A | 6587329-C-A | ** | ||||||
6630588-T-A | 6762547-T-A | ** | ||||||
6769798-C-A | 6901757-C-A | ** | ||||||
6784292-C-A | 6916251-C-A | ** | ||||||
6915836-T-A | 7047795-T-A | ** | ||||||
6922582-T-A | 7054541-T-A | ** | ||||||
6942851-C-A | 7074810-C-A | ** | ||||||
7000021-C-A | 7131980-C-A | ** | ||||||
7028805-C-A | 7160764-C-A | ** | ||||||
7102522-C-A | 7234481-C-A | ** | ||||||
7182982-C-A | 7314941-C-A | ** | ||||||
7190586-C-A | 7322545-C-A | ** | ||||||
7255454-T-G | 7387413-T-G | ** | ||||||
7255872-G-T | 7387831-G-T | ** | ||||||
7340303-C-A | 7472262-C-A | ** | ||||||
7344317-C-A | 7476276-C-A | ** | ||||||
7359880-A-T | 7491839-A-T | ** | ||||||
7436238-C-A | 7568197-C-A | ** | ||||||
7499265-G-T | 7631224-G-T | IR1_L | ** | |||||
7621869-T-C | 7753828-T-C | ** | ||||||
7754966-C-A | 7886925-C-A | ** | ||||||
7757157-T-G | 7889116-T-G | ** | ||||||
8049613-C-T | 8181572-C-T | ** | ||||||
8171767-G-T | 8303726-G-T | ** | ||||||
8403271-G-C | 8535230-G-C | ** | ||||||
8669730-C-A | 8801689-C-A | ** | ||||||
8698700-C-A | 8830659-C-A | ** | ||||||
8699222-T-A | 8831181-T-A | ** | ||||||
8807676-C-A | 8939635-C-A | ** | ||||||
8831136-C-A | 8963095-C-A | ** | ||||||
9047569-C-A | 9209960-C-A | ** | ||||||
9048036-C-A | 9210427-C-A | ** | ||||||
9440235-T-G | 9602626-T-G | ** | ||||||
9540249-T-TA | 9702640-T-TA | IR3_Prx | ** | |||||
9908406-A-T | 10070797-A-T | ** | ||||||
10031837-C-A | 10194228-C-A | ** | ||||||
10662286-C-A | ** | |||||||
10669403-C-CT | ** | |||||||
10669411-TTTCATTCATC-T | ** | |||||||
10669687-G-T | ** | |||||||
10678367-C-A | ** | |||||||
10688929-A-C | ** | |||||||
10750927-T-A | ** | |||||||
10755075-T-TACA | ** | |||||||
10761955-A-T | ** | |||||||
10763078-TTCCAC-T | ** | |||||||
10859166-A-T | ** | |||||||
10868707-T-G | ** | |||||||
10870027-C-A | ** | |||||||
10956045-C-A | ** | |||||||
10972312-TCCA-T | ** | |||||||
10973728-T-G | ** | |||||||
10978196-T-C | ** | |||||||
10980784-C-A | ** | |||||||
10991246-A-G | ** | |||||||
10995809-C-A | ** | |||||||
11000667-C-A | ** | |||||||
11000725-G-T | ** | |||||||
11009637-A-C | ** | |||||||
11012274-A-C | ** | |||||||
11015432-A-G | ** | |||||||
11018735-T-A | ** | |||||||
11025193-C-A | ** | |||||||
13205266-A-C | 11049590-A-C | ** | ||||||
13229533-T-G | 11073857-T-G | ** | ||||||
13255401-A-G | 11099725-A-G | ** | ||||||
13269280-C-A | 11113604-C-A | ** | ||||||
13304376-T-C | 11148700-T-C | ** | ||||||
13315708-C-A | 11160032-C-A | ** | ||||||
13330410-C-A | 11174734-C-A | ** | ||||||
13384440-C-A | 11228764-C-A | ** | ||||||
13460076-G-T | 11304400-G-T | ** | ||||||
13479741-A-G | 11324065-A-G | ** | ||||||
13503508-T-A | 11347832-T-A | ** | ||||||
13531506-A-G | 11375830-A-G | ** | ||||||
13531498-GA-G | 11375822-GA-G | 10×A | ** | |||||
13643957-T-A | 11488281-T-A | ** | ||||||
11646427-C-A | ** | |||||||
11674858-C-A | ** | |||||||
11674987-G-A | ** | |||||||
13801402-TG-T | 11680696-TG-T | ** | ||||||
13896383-C-A | 11775677-C-A | ** | ||||||
13896827-A-T | 11776121-A-T | ** | ||||||
13936205-G-GAAGAAGGA | 11815499-G-GAAGAAGGA | 14×AAGA | ** | |||||
13961488-T-G | 11840782-T-G | ** | ||||||
13975875-C-T | 11855169-C-T | ** | ||||||
13997813-C-A | 11877107-C-A | ** | ||||||
14059343-A-C | 11938637-A-C | ** | ||||||
14077967-G-A | 11957261-G-A | ** | ||||||
14128325-TA-T | 12007619-TA-T | ** | ||||||
14146762-C-A | 12026056-C-A | ** | ||||||
14187259-A-G | 12066553-A-G | ** | ||||||
14213792-A-G | 12093086-A-G | ** | ||||||
14219633-T-A | 12098927-T-A | ** | ||||||
14220917-C-A | 12100211-C-A | ** | ||||||
14284954-C-A | 12164248-C-A | ** | ||||||
14316417-C-A | 12195711-C-A | ** | ||||||
14395193-C-A | 12274489-C-A | ** | ||||||
14397505-A-T | 12276801-A-T | ** | ||||||
14441923-A-G | 12321196-A-G | ** | ||||||
14524025-T-C | 12412226-T-C | ** | ||||||
14584756-C-A | 12472956-C-A | ** | ||||||
14609797-C-A | 12497999-C-A | ** | ||||||
14753200-C-A | 12641269-C-A | ** | ||||||
14788091-A-G | 12676162-A-G | ** | ||||||
14858648-A-C | 12746714-A-C | ** | ||||||
14932001-A-G | 12820066-A-G | ** | ||||||
14993842-A-T | 12881927-A-T | 13×T | ** | |||||
15047869-C-A | 12935960-C-A | ** | ||||||
15201540-T-C | 13089626-T-C | ** | ||||||
15239770-T-C | 13127856-T-C | ** | ||||||
15380467-C-A | 13268587-C-A | ** | ||||||
15392201-G-C | 13280321-G-C | ** | ||||||
15397851-A-G | 13285971-A-G | ** | ||||||
15397856-T-A | 13285976-T-A | ** | ||||||
15428463-C-A | 13316583-C-A | ** | ||||||
15475039-C-G | 13363159-C-G | ** | ||||||
15495219-G-A | 13383339-G-A | FT304776 | ** | |||||
15619885-G-A | 13508005-G-A | ** | ||||||
15631864-C-A | 13519984-C-A | ** | ||||||
15669859-C-A | 13557979-C-A | ** | ||||||
15730450-T-C | 13618570-T-C | ** | ||||||
15746375-G-T | 13634495-G-T | ** | ||||||
15762007-T-A | 13650127-T-A | ** | ||||||
15789859-G-T | 13677979-G-T | ** | ||||||
15866201-G-A | 13754321-G-A | ** | ||||||
15926923-A-G | 13815043-A-G | ** | ||||||
15961105-G-T | 13849225-G-T | ** | ||||||
15971511-A-G | 13859631-A-G | ** | ||||||
15972119-A-G | 13860239-A-G | ** | ||||||
15975072-C-A | 13863192-C-A | ** | ||||||
16037330-A-G | 13925450-A-G | ** | ||||||
16046256-C-A | 13934376-C-A | ** | ||||||
16047075-A-G | 13935195-A-G | ** | ||||||
16107445-T-TA | 13995565-T-TA | P8_Prx | ** | |||||
16146468-A-AC | 14034588-A-AC | P8_Dst | ** | |||||
16146522-A-C | 14034642-A-C | P8_Dst | ** | |||||
16290801-A-ACACCAC | 14178921-A-ACACCAC | ** | ||||||
16290806-TA-T | 14178926-TA-T | ** | ||||||
16297247-T-A | 14185367-T-A | ** | ||||||
16309248-G-T | 14197368-G-T | ** | ||||||
16320335-G-C | 14208455-G-C | ** | ||||||
16342339-GAAAGA-G | 14230459-GAAAGA-G | ** | ||||||
16438009-T-A | 14326129-T-A | ** | ||||||
16620036-CTGCA-C | 14508156-CTGCA-C | ** | ||||||
16620389-C-G | 14508509-C-G | ** | ||||||
16621244-TA-T | 14509364-TA-T | ** | ||||||
16666115-C-T | 14554235-C-T | ** | ||||||
16666118-G-T | 14554238-G-T | ** | ||||||
16666129-C-T | 14554249-C-T | ** | ||||||
16682673-T-A | 14570793-T-A | ** | ||||||
16703493-G-A | 14591613-G-A | ** | ||||||
16765656-C-A | 14653776-C-A | ** | ||||||
16827461-C-T | 14715581-C-T | ** | ||||||
17027467-C-T | 14915587-C-T | ** | ||||||
17085923-C-A | 14974043-C-A | ** | ||||||
17118374-C-A | 15006494-C-A | ** | ||||||
17277405-CA-C | 15165525-CA-C | ** | ||||||
17306447-A-G | 15194567-A-G | ** | ||||||
17307341-C-A | 15195461-C-A | ** | ||||||
17319814-G-T | 15207934-G-T | ** | ||||||
17450137-C-A | 15338257-C-A | ** | ||||||
17464807-C-A | 15352927-C-A | ** | ||||||
17491021-C-A | 15379141-C-A | ** | ||||||
17527354-G-GTATATATATA | 15415474-G-GTATATATATA | 10×TA | ** | |||||
17629740-C-A | 15517860-C-A | ** | ||||||
17629778-C-A | 15517898-C-A | ** | ||||||
17684366-A-C | 15572486-A-C | ** | ||||||
17802069-A-C | 15690189-A-C | ** | ||||||
18087039-C-A | 15975159-C-A | ** | ||||||
18183714-C-A | 16071834-C-A | ** | ||||||
18192087-C-T | 16080207-C-T | ** | ||||||
18378995-A-G | 16267115-A-G | P6_Prx | ** | |||||
18379000-C-A | 16267120-C-A | P6_Prx | ** | |||||
18379001-A-T | 16267121-A-T | P6_Prx | ** | |||||
18395866-G-C | 16283986-G-C | P6_Gap | ** | |||||
18626751-G-T | 16514871-G-T | ** | ||||||
18707832-C-A | 16595952-C-A | ** | ||||||
18730611-C-A | 16618731-C-A | ** | ||||||
18892079-A-G | 16780199-A-G | FT147325 | ** | |||||
18949878-G-A | 16837998-G-A | ** | ||||||
18978830-C-A | 16866950-C-A | ** | ||||||
18978846-T-G | 16866966-T-G | ** | ||||||
18980556-C-A | 16868676-C-A | ** | ||||||
18980560-T-G | 16868680-T-G | ** | ||||||
19071350-C-A | 16959470-C-A | ** | ||||||
19104475-C-A | 16992595-C-A | ** | ||||||
19127669-C-CAT | 17015789-C-CAT | ** | ||||||
19248187-C-A | 17136307-C-A | ** | ||||||
19415439-C-T | 17303559-C-T | ** | ||||||
19416574-C-A | 17304694-C-A | ** | ||||||
19438608-G-A | 17326728-G-A | ** | ||||||
19448401-T-C | 17336521-T-C | ** | ||||||
19463306-G-T | 17351426-G-T | ** | ||||||
19502815-AGTGAATAATTTTGGAGACTGG-A | 17390935-AGTGAATAATTTTGGAGACTGG-A | ** | ||||||
19506859-T-G | 17394979-T-G | ** | ||||||
19558785-C-A | 17446905-C-A | ** | ||||||
19682366-A-AGAAC | 17570486-A-AGAAC | P5_Prx | ** | |||||
20376601-T-G | 18214715-T-G | P5_Dst | ** | |||||
20458566-C-G | 18296680-C-G | P5_Dst | ** | |||||
20654890-A-T | 18493004-A-T | P4_Prx | ** | |||||
21135063-G-T | 18973177-G-T | ** | ||||||
21135066-A-T | 18973180-A-T | ** | ||||||
21206937-C-G | 19045051-C-G | ** | ||||||
21263563-C-A | 19101677-C-A | ** | ||||||
21307197-C-A | 19145311-C-A | ** | ||||||
21363211-T-C | 19201325-T-C | ** | ||||||
21459878-C-A | 19297992-C-A | ** | ||||||
21462566-T-C | 19300680-T-C | FTB34202 | ** | |||||
21565921-C-T | 19404035-C-T | ** | ||||||
21665617-G-A | 19503731-G-A | ** | ||||||
21700556-T-A | 19538670-T-A | ** | ||||||
22037558-T-C | 19875672-T-C | ** | ||||||
22037587-A-C | 19875701-A-C | ** | ||||||
22529537-A-T | 20367651-A-T | ** | ||||||
22537303-A-C | 20375417-A-C | ** | ||||||
22615366-C-A | 20453480-C-A | ** | ||||||
22760760-C-A | 20598874-C-A | ** | ||||||
22775234-T-A | 20613348-T-A | ** | ||||||
22836612-T-C | 20674726-T-C | ** | ||||||
23052502-A-G | 20890616-A-G | ** | ||||||
23066740-T-G | 20904854-T-G | ** | ||||||
23340556-A-G | 21178670-A-G | ** | ||||||
23552658-G-T | 21390772-G-T | ** | ||||||
23848381-G-A | 21686495-G-A | ** | ||||||
23885150-T-C | 21723264-T-C | ** | ||||||
24371854-A-T | 22225707-A-T | ** | ||||||
24403644-C-A | 22257497-C-A | ** | ||||||
24403657-C-A | 22257510-C-A | ** | ||||||
24403934-C-A | 22257787-C-A | ** | ||||||
24405380-C-A | 22259233-C-A | ** | ||||||
24875533-G-T | 22729386-G-T | g1 | ** | |||||
26124156-G-T | 23978009-G-T | P1_Y1 | ** | |||||
26201054-T-G | 24054907-T-G | P1_Y1 | ** | |||||
26201116-T-TA | 24054969-T-TA | P1_Y1 | ** | |||||
26467179-G-T | 24321032-G-T | P1_Y1 | ** | |||||
28429376-G-T | 26283229-G-T | P1_gr2 | ** | |||||
28429419-G-T | 26283272-G-T | P1_gr2 | ** | |||||
28504571-G-T | 26358424-G-T | ** | ||||||
28518734-C-A | 26372587-C-A | ** | ||||||
28537928-C-A | 26391781-C-A | ** | ||||||
28598934-GGGTCA-G | 26452787-GGGTCA-G | ** | ||||||
28646941-G-T | 26500794-G-T | ** | ||||||
28665441-G-T | 26519294-G-T | ** | ||||||
28703944-C-A | 26557797-C-A | ** | ||||||
28765253-T-A | 26619106-T-A | ** | ||||||
28791066-T-G | 26644919-T-G | ** | ||||||
28797942-G-T | 26651795-G-T | ** | ||||||
56825835-G-T | ** | |||||||
56835776-C-A | ** | |||||||
13457815-C-T | 11302139-C-T | *** | ||||||
19071489-C-A | 16959609-C-A | *** | ||||||
8428927-G-A | 8560886-G-A | BY72649 | *** | |||||
21491209-G-T | 19329323-G-T | *** | ||||||
7142760-C-A | 7274719-C-A | *** | ||||||
10964821-GGACTC-A | *** | |||||||
7760052-G-T | 7892011-G-T | *** | ||||||
7165304-G-T | 7297263-G-T | *** | ||||||
10801691-C-T | *** | |||||||
10801699-T-TTCGAC | *** | |||||||
18717894-T-A | 16606014-T-A | *** | ||||||
18717895-G-A | 16606015-G-A | *** | ||||||
16297367-A-T | 14185487-A-T | *** | ||||||
27829239-G-T | 25683092-G-T | P1_Y2 | *** | |||||
56832182-G-GCATTC | 4×CATTC | *** | ||||||
14073022-G-T | 11952316-G-T | *** | ||||||
7717648-T-C | 7849607-T-C | *** | ||||||
10987897-TCCTCA-T | *** | |||||||
28800592-C-A | 26654445-C-A | *** | ||||||
18243996-C-A | 16132116-C-A | *** | ||||||
15059436-C-A | 12947528-C-A | *** | ||||||
24432904-G-T | 22286757-G-T | *** | ||||||
14784701-CTTTTTTTT-C | 12672771-CTTTTTTTT-C | 22×T | *** | |||||
8069959-ATTTTTTT-A | 8201918-ATTTTTTT-A | 19×T | *** | |||||
18019832-CTTTTTTTT-C | 15907952-CTTTTTTTT-C | 22×T | *** | |||||
8725419-C-A | 8857378-C-A | *** | ||||||
21658686-C-A | 19496800-C-A | *** | ||||||
16526506-C-A | 14414626-C-A | *** | ||||||
23427050-T-C | 21265164-T-C | *** | ||||||
7717644-T-C | 7849603-T-C | *** | ||||||
17146510-C-A | 15034630-C-A | *** | ||||||
2809559-G-T | 2941518-G-T | *** | ||||||
4271112-T-C | 4403071-T-C | *** | ||||||
6981082-G-T | 7113041-G-T | *** | ||||||
7225780-G-T | 7357739-G-T | *** | ||||||
7947080-G-T | 8079039-G-T | *** | ||||||
8214249-A-G | 8346208-A-G | *** | ||||||
8399288-C-A | 8531247-C-A | *** | ||||||
9678330-T-C | 9840721-T-C | IR3_Prx | *** | |||||
10673972-G-GCAATA | *** | |||||||
10835789-C-A | *** | |||||||
11031616-CATTCC-C,CATTCA | *** | |||||||
11649597-A-T | *** | |||||||
13862778-C-A | 11742072-C-A | BY91581 | *** | |||||
15397237-G-T | 13285357-G-T | *** | ||||||
15616864-G-T | 13504984-G-T | *** | ||||||
15776180-AAAGCTAG-A | 13664300-AAAGCTAG-A | *** | ||||||
16199546-T-A | 14087666-T-A | *** | ||||||
16463546-A-T | 14351666-A-T | *** | ||||||
17929456-G-T | 15817576-G-T | *** | ||||||
17951518-A-G | 15839638-A-G | *** | ||||||
19155014-G-T | 17043134-G-T | *** | ||||||
19187410-TTTTG-G,TTTTT | 17075530-TTTTG-G,TTTTT | *** | ||||||
19436732-GAAAGAA-G,GAAAGAG | 17324852-GAAAGAA-G,GAAAGAG | *** | ||||||
21228143-C-A | 19066257-C-A | *** | ||||||
21549211-C-A | 19387325-C-A | *** | ||||||
21827460-C-T | 19665574-C-T | *** | ||||||
22229309-C-A | 20067423-C-A | DYZ19 | *** | |||||
23427049-G-A | 21265163-G-A | *** | ||||||
28612373-G-T | 26466226-G-T | *** | ||||||
28784443-G-GATGAA | 26638296-G-GATGAA | *** | ||||||
56836433-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.