Garcia
BigY2: 342938MDKA Birth:
Portugal > AzoresTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 342938 |
|---|---|---|---|---|---|---|---|
| hg19:Y:17989342-T-G hg38:Y:15877462-T-G | P7_Prx | Y | A* | ||||
| hg19:Y:22289759-C-A hg38:Y:20127873-C-A | DYZ19 | A* | |||||
| hg19:Y:25884708-T-G hg38:Y:23738561-T-G | P1_Y1 | A* | |||||
| hg19:Y:26130246-A-G hg38:Y:23984099-A-G | P1_Y1 | A* | |||||
| hg19:Y:26159782-A-G hg38:Y:24013635-A-G | P1_Y1 | A* | |||||
| hg19:Y:22239260-G-T hg38:Y:20077374-G-T | BY30376 | DYZ19 | + | ||||
| hg19:Y:7032236-A-C hg38:Y:7164195-A-C | BY30355 | Y | + | ||||
| hg19:Y:8460809-A-T hg38:Y:8592768-A-T | BY30357 | Y | Y | + | |||
| hg19:Y:8527322-G-T hg38:Y:8659281-G-T | BY30358 | Y | Y | + | |||
| hg19:Y:8532234-C-T hg38:Y:8664193-C-T | BY30359 | Y | Y | + | |||
| hg19:Y:9841030-G-A hg38:Y:10003421-G-A | Y138624 | Y | Y | + | |||
| hg19:Y:14935221-A-G hg38:Y:12823286-A-G | BY30360 | Y | Y | + | |||
| hg19:Y:15356057-G-C hg38:Y:13244176-G-C | BY30361 | Y | Y | + | |||
| hg19:Y:15548847-G-C hg38:Y:13436967-G-C | BY30362 | Y | Y | 18×AC | + | ||
| hg19:Y:17270858-C-T hg38:Y:15158978-C-T | Y138665 | Y | Y | + | |||
| hg19:Y:17665080-T-G hg38:Y:15553200-T-G | BY30365 | Y | Y | + | |||
| hg19:Y:18123264-T-C hg38:Y:16011384-T-C | Y138670 | Y | Y | + | |||
| hg19:Y:18205933-C-T hg38:Y:16094053-C-T | BY30367 | Y | Y | + | |||
| hg19:Y:18237870-A-G hg38:Y:16125990-A-G | BY30368 | Y | + | ||||
| hg19:Y:18415997-C-CT hg38:Y:16304117-C-CT | P6_Gap | + | |||||
| hg19:Y:19076526-T-A hg38:Y:16964646-T-A | BY30369 | Y | Y | + | |||
| hg19:Y:21223256-C-A hg38:Y:19061370-C-A | BY30370 | Y | Y | + | |||
| hg19:Y:22112446-T-C hg38:Y:19950560-T-C | BY30371 | Y | Y | + | |||
| hg19:Y:22470091-G-T hg38:Y:20308205-G-T | BY30372 | DYZ19 | + | ||||
| hg19:Y:22483679-G-C hg38:Y:20321793-G-C | BY30373 | DYZ19 | + | ||||
| hg19:Y:23592757-A-G hg38:Y:21430871-A-G | BY30375 | Y | Y | + | |||
| hg19:Y:23611781-G-C hg38:Y:21449895-G-C | Y138690 | Y | Y | + | |||
| hg19:Y:23785457-G-T hg38:Y:21623571-G-T | Y138602 | Y | + | ||||
| hg19:Y:24441426-AC-A hg38:Y:22295279-AC-A | + | ||||||
| hg38:Y:12499082-GATACATAC-G | 10×ATAC | * | |||||
| hg19:Y:22303066-G-A hg38:Y:20141180-G-A | DYZ19 | * | |||||
| hg19:Y:22335032-G-T hg38:Y:20173146-G-T | DYZ19 | * | |||||
| hg19:Y:7590468-T-C hg38:Y:7722427-T-C | ** | ||||||
| hg19:Y:16071715-G-T hg38:Y:13959835-G-T | ** | ||||||
| hg19:Y:13461074-T-G hg38:Y:11305398-T-G | ** | ||||||
| hg19:Y:15952618-C-A hg38:Y:13840738-C-A | A5870 | S3565 | ** | ||||
| hg38:Y:10767718-T-C | ** | ||||||
| hg19:Y:14562895-C-A hg38:Y:12451095-C-A | ** | ||||||
| hg38:Y:10945403-A-T | ** | ||||||
| hg38:Y:10938029-T-C | ** | ||||||
| hg38:Y:10938056-A-T | FT437331 | ** | |||||
| hg38:Y:10938060-C-T | ** | ||||||
| hg38:Y:10938073-G-T | ** | ||||||
| hg19:Y:2728210-G-T hg38:Y:2860169-G-T | ** | ||||||
| hg19:Y:5189393-C-A hg38:Y:5321352-C-A | ** | ||||||
| hg38:Y:11014485-T-C | ** | ||||||
| hg19:Y:3012162-G-T hg38:Y:3144121-G-T | ** | ||||||
| hg19:Y:7784580-C-A hg38:Y:7916539-C-A | ** | ||||||
| hg19:Y:13213970-G-T hg38:Y:11058294-G-T | ** | ||||||
| hg38:Y:11028097-GTCCGT-G | ** | ||||||
| hg19:Y:14926238-C-T hg38:Y:12814303-C-T | ** | ||||||
| hg19:Y:20603903-G-T hg38:Y:18442017-G-T | P5_Dst | ** | |||||
| hg38:Y:10983592-C-A | ** | ||||||
| hg38:Y:11018922-C-A | ** | ||||||
| hg19:Y:22299860-G-C hg38:Y:20137974-G-C | BY43778 | DYZ19 | ** | ||||
| hg19:Y:19600612-A-T hg38:Y:17488732-A-T | P5_Prx | ** | |||||
| hg19:Y:14727371-C-A hg38:Y:12615439-C-A | ** | ||||||
| hg19:Y:13846799-C-A hg38:Y:11726093-C-A | DYZ17 | ** | |||||
| hg19:Y:19600582-G-T hg38:Y:17488702-G-T | P5_Prx | ** | |||||
| hg19:Y:19600600-G-T hg38:Y:17488720-G-T | P5_Prx | ** | |||||
| hg19:Y:22325343-T-A hg38:Y:20163457-T-A | DYZ19 | ** | |||||
| hg19:Y:23200646-C-A hg38:Y:21038760-C-A | ** | ||||||
| hg19:Y:5172149-G-A hg38:Y:5304108-G-A | ** | ||||||
| hg38:Y:10925006-T-G | ** | ||||||
| hg19:Y:28816063-A-T hg38:Y:26669916-A-T | ** | ||||||
| hg19:Y:21616046-C-A hg38:Y:19454160-C-A | ** | ||||||
| hg38:Y:10938088-T-G | ** | ||||||
| hg38:Y:10938093-C-G | ** | ||||||
| hg38:Y:10945433-C-T | ** | ||||||
| hg19:Y:15786750-C-A hg38:Y:13674870-C-A | ** | ||||||
| hg38:Y:10961246-C-A | ** | ||||||
| hg19:Y:19135256-G-T hg38:Y:17023376-G-T | ** | ||||||
| hg19:Y:21373614-C-A hg38:Y:19211728-C-A | FT170612 | ** | |||||
| hg19:Y:7390682-C-A hg38:Y:7522641-C-A | ** | ||||||
| hg19:Y:22645692-C-A hg38:Y:20483806-C-A | ** | ||||||
| hg38:Y:10776504-TTCC-T | ** | ||||||
| hg38:Y:11007971-A-T | ** | ||||||
| hg19:Y:6734868-C-A hg38:Y:6866827-C-A | ** | ||||||
| hg19:Y:7669092-C-A hg38:Y:7801051-C-A | ** | ||||||
| hg38:Y:10664824-C-G | ** | ||||||
| hg38:Y:10962647-C-G | ** | ||||||
| hg19:Y:14080128-G-T hg38:Y:11959422-G-T | ** | ||||||
| hg19:Y:20250037-T-TA hg38:Y:18088151-T-TA | P5_Dst | ** | |||||
| hg19:Y:5459163-C-A hg38:Y:5591122-C-A | ** | ||||||
| hg19:Y:8100594-C-T hg38:Y:8232553-C-T | ** | ||||||
| hg38:Y:10764756-T-C | ** | ||||||
| hg38:Y:10764766-C-T | FT430207 | ** | |||||
| hg38:Y:10682524-T-A | ** | ||||||
| hg19:Y:16054252-CT-C hg38:Y:13942372-CT-C | ** | ||||||
| hg19:Y:7238341-C-A hg38:Y:7370300-C-A | ** | ||||||
| hg19:Y:14252129-C-A hg38:Y:12131423-C-A | ** | ||||||
| hg38:Y:10872238-C-T | ** | ||||||
| hg19:Y:17222754-T-G hg38:Y:15110874-T-G | ** | ||||||
| hg19:Y:26391599-C-A hg38:Y:24245452-C-A | P1_Y1 | ** | |||||
| hg38:Y:11005539-C-A | ** | ||||||
| hg38:Y:10781154-T-G | ** | ||||||
| hg38:Y:10747013-C-A | ** | ||||||
| hg38:Y:10821846-G-A | ** | ||||||
| hg19:Y:28815163-G-T hg38:Y:26669016-G-T | ** | ||||||
| hg19:Y:28815167-T-A hg38:Y:26669020-T-A | ** | ||||||
| hg19:Y:28816053-T-G hg38:Y:26669906-T-G | ** | ||||||
| hg19:Y:16532786-C-A hg38:Y:14420906-C-A | ** | ||||||
| hg38:Y:10667569-T-A | ** | ||||||
| hg19:Y:22634800-G-T hg38:Y:20472914-G-T | ** | ||||||
| hg19:Y:16199658-C-A hg38:Y:14087778-C-A | ** | ||||||
| hg19:Y:4757369-C-A hg38:Y:4889328-C-A | ** | ||||||
| hg38:Y:10668572-ATTAAT-A | ** | ||||||
| hg38:Y:10658953-C-G | ** | ||||||
| hg38:Y:10658956-C-T | ** | ||||||
| hg38:Y:10658979-C-G | ** | ||||||
| hg38:Y:10658980-C-A | ** | ||||||
| hg38:Y:10658983-A-C | FT150238 | ** | |||||
| hg38:Y:10658992-TC-T | ** | ||||||
| hg38:Y:10659005-C-G | ** | ||||||
| hg38:Y:10659008-A-C | ** | ||||||
| hg38:Y:10659018-C-T | FT225299 | ** | |||||
| hg38:Y:10659019-C-G | ** | ||||||
| hg38:Y:10659027-T-G | ** | ||||||
| hg38:Y:10659034-G-A | ** | ||||||
| hg38:Y:10659040-C-T | ** | ||||||
| hg38:Y:10659049-C-A | ** | ||||||
| hg19:Y:5774909-C-A hg38:Y:5906868-C-A | ** | ||||||
| hg19:Y:15262457-AC-A hg38:Y:13150541-AC-A | ** | ||||||
| hg19:Y:17869706-C-A hg38:Y:15757826-C-A | ** | ||||||
| hg38:Y:10961250-C-T | ** | ||||||
| hg19:Y:9231746-T-C hg38:Y:9394137-T-C | ** | ||||||
| hg19:Y:2853422-T-C hg38:Y:2985381-T-C | ** | ||||||
| hg19:Y:28673591-C-A hg38:Y:26527444-C-A | ** | ||||||
| hg19:Y:4626366-C-A hg38:Y:4758325-C-A | ** | ||||||
| hg19:Y:18634872-C-A hg38:Y:16522992-C-A | ** | ||||||
| hg38:Y:10809130-T-C | ** | ||||||
| hg38:Y:11034902-G-T | ** | ||||||
| hg38:Y:10764594-C-A | ** | ||||||
| hg38:Y:10880960-T-G | ** | ||||||
| hg19:Y:13311861-A-C hg38:Y:11156185-A-C | ** | ||||||
| hg38:Y:10809091-TGCGTTTCTTTCG-T | ** | ||||||
| hg19:Y:14703520-C-A hg38:Y:12591586-C-A | ** | ||||||
| hg19:Y:13928051-C-A hg38:Y:11807345-C-A | ** | ||||||
| hg38:Y:56845445-A-T | ** | ||||||
| hg38:Y:10938070-A-G | ** | ||||||
| hg38:Y:10938072-C-T | FT437332 | ** | |||||
| hg38:Y:10938091-T-A | ** | ||||||
| hg38:Y:10938115-C-T | ** | ||||||
| hg38:Y:10652625-C-A | ** | ||||||
| hg38:Y:10659013-C-T | ** | ||||||
| hg38:Y:10872257-T-AG | ** | ||||||
| hg38:Y:10872261-TA-T | ** | ||||||
| hg19:Y:28816043-A-G hg38:Y:26669896-A-G | ** | ||||||
| hg19:Y:7238000-C-A hg38:Y:7369959-C-A | ** | ||||||
| hg38:Y:11005475-C-G | ** | ||||||
| hg38:Y:11005478-C-G | ** | ||||||
| hg38:Y:11005494-A-G | ** | ||||||
| hg38:Y:11005502-C-G | ** | ||||||
| hg38:Y:11005505-C-G | ** | ||||||
| hg38:Y:11005524-C-CAT | ** | ||||||
| hg38:Y:11005544-C-T | ** | ||||||
| hg38:Y:11005549-C-A | ** | ||||||
| hg19:Y:28479726-C-A hg38:Y:26333579-C-A | ** | ||||||
| hg19:Y:14184467-T-C hg38:Y:12063761-T-C | ** | ||||||
| hg19:Y:2784196-C-A hg38:Y:2916155-C-A | ** | ||||||
| hg38:Y:10790961-T-C | ** | ||||||
| hg38:Y:11030716-C-A | ** | ||||||
| hg19:Y:2806202-T-TG hg38:Y:2938161-T-TG | ** | ||||||
| hg19:Y:27714272-A-C hg38:Y:25568125-A-C | P1_Y2 | ** | |||||
| hg19:Y:24290673-T-G hg38:Y:22144526-T-G | P3_t1 | ** | |||||
| hg19:Y:22613812-C-A hg38:Y:20451926-C-A | ** | ||||||
| hg38:Y:10997456-C-A | ** | ||||||
| hg19:Y:8100596-T-C hg38:Y:8232555-T-C | ** | ||||||
| hg19:Y:13856388-G-T hg38:Y:11735682-G-T | DYZ17 | ** | |||||
| hg19:Y:13888528-G-T hg38:Y:11767822-G-T | ** | ||||||
| hg19:Y:15342510-A-C hg38:Y:13230629-A-C | ** | ||||||
| hg19:Y:22766701-C-A hg38:Y:20604815-C-A | ** | ||||||
| hg38:Y:10884929-G-T | ** | ||||||
| hg19:Y:28815161-G-C hg38:Y:26669014-G-C | ** | ||||||
| hg38:Y:10954348-C-T | ** | ||||||
| hg19:Y:28816061-G-T hg38:Y:26669914-G-T | ** | ||||||
| hg19:Y:18274912-G-T hg38:Y:16163032-G-T | P6_Prx | ** | |||||
| hg19:Y:16413467-C-A hg38:Y:14301587-C-A | ** | ||||||
| hg19:Y:3815125-G-T hg38:Y:3947084-G-T | ** | ||||||
| hg19:Y:13485658-T-C hg38:Y:11329982-T-C | ** | ||||||
| hg38:Y:11657352-C-A | DYZ17 | ** | |||||
| hg38:Y:10957799-T-G | ** | ||||||
| hg19:Y:7131341-T-G hg38:Y:7263300-T-G | ** | ||||||
| hg19:Y:13698503-G-T hg38:Y:11542827-G-T | DYZ17 | ** | |||||
| hg19:Y:21220921-C-A hg38:Y:19059035-C-A | ** | ||||||
| hg19:Y:22124532-C-A hg38:Y:19962646-C-A | ** | ||||||
| hg19:Y:19403932-C-A hg38:Y:17292052-C-A | ** | ||||||
| hg19:Y:16876977-C-A hg38:Y:14765097-C-A | ** | ||||||
| hg38:Y:10764574-C-T | ** | ||||||
| hg19:Y:15608087-C-A hg38:Y:13496207-C-A | ** | ||||||
| hg19:Y:28533766-C-T hg38:Y:26387619-C-T | ** | ||||||
| hg19:Y:19183988-C-A hg38:Y:17072108-C-A | BY181990 | ** | |||||
| hg19:Y:18050339-A-T hg38:Y:15938459-A-T | ** | ||||||
| hg19:Y:17462116-C-A hg38:Y:15350236-C-A | ** | ||||||
| hg19:Y:13645501-C-A hg38:Y:11489825-C-A | ** | ||||||
| hg19:Y:14610622-T-G hg38:Y:12498824-T-G | ** | ||||||
| hg19:Y:2778638-T-C hg38:Y:2910597-T-C | ** | ||||||
| hg38:Y:10888219-T-C | ** | ||||||
| hg19:Y:28815219-G-C hg38:Y:26669072-G-C | ** | ||||||
| hg19:Y:28653281-G-C hg38:Y:26507134-G-C | ** | ||||||
| hg19:Y:28653284-A-T hg38:Y:26507137-A-T | ** | ||||||
| hg38:Y:11030724-C-A | ** | ||||||
| hg19:Y:9444870-C-A hg38:Y:9607261-C-A | ** | ||||||
| hg19:Y:15909799-C-A hg38:Y:13797919-C-A | Y95109 | ** | |||||
| hg38:Y:10957882-C-A | ** | ||||||
| hg19:Y:6479345-C-A hg38:Y:6611304-C-A | ** | ||||||
| hg19:Y:2791373-A-G hg38:Y:2923332-A-G | ** | ||||||
| hg19:Y:2810365-C-A hg38:Y:2942324-C-A | ** | ||||||
| hg19:Y:2813412-T-C hg38:Y:2945371-T-C | BY56596 | ** | |||||
| hg19:Y:2832581-C-T hg38:Y:2964540-C-T | ** | ||||||
| hg19:Y:3175991-C-A hg38:Y:3307950-C-A | ** | ||||||
| hg19:Y:3389385-C-A hg38:Y:3521344-C-A | ** | ||||||
| hg19:Y:3435902-C-G hg38:Y:3567861-C-G | FT233474 | ** | |||||
| hg19:Y:3467645-G-T hg38:Y:3599604-G-T | ** | ||||||
| hg19:Y:3592839-C-A hg38:Y:3724798-C-A | ** | ||||||
| hg19:Y:3627515-C-A hg38:Y:3759474-C-A | ** | ||||||
| hg19:Y:3732698-G-A hg38:Y:3864657-G-A | ** | ||||||
| hg19:Y:3815262-G-T hg38:Y:3947221-G-T | ** | ||||||
| hg19:Y:3865552-A-T hg38:Y:3997511-A-T | ** | ||||||
| hg19:Y:3876177-AC-A hg38:Y:4008136-AC-A | ** | ||||||
| hg19:Y:3951353-A-C hg38:Y:4083312-A-C | ** | ||||||
| hg19:Y:4017115-T-A hg38:Y:4149074-T-A | ** | ||||||
| hg19:Y:4236043-G-T hg38:Y:4368002-G-T | ** | ||||||
| hg19:Y:4473566-C-A hg38:Y:4605525-C-A | ** | ||||||
| hg19:Y:4505110-T-G hg38:Y:4637069-T-G | ** | ||||||
| hg19:Y:4604378-A-C hg38:Y:4736337-A-C | ** | ||||||
| hg19:Y:4717827-G-T hg38:Y:4849786-G-T | ** | ||||||
| hg19:Y:5393413-T-C hg38:Y:5525372-T-C | ** | ||||||
| hg19:Y:5459206-A-T hg38:Y:5591165-A-T | ** | ||||||
| hg19:Y:5524227-T-A hg38:Y:5656186-T-A | ** | ||||||
| hg19:Y:5620857-A-T hg38:Y:5752816-A-T | ** | ||||||
| hg19:Y:5686909-G-T hg38:Y:5818868-G-T | ** | ||||||
| hg19:Y:6369130-T-G hg38:Y:6501089-T-G | ** | ||||||
| hg19:Y:6384330-C-G hg38:Y:6516289-C-G | ** | ||||||
| hg19:Y:6397230-T-G hg38:Y:6529189-T-G | ** | ||||||
| hg19:Y:6510349-G-T hg38:Y:6642308-G-T | ** | ||||||
| hg19:Y:6766029-T-G hg38:Y:6897988-T-G | ** | ||||||
| hg19:Y:6792453-C-A hg38:Y:6924412-C-A | ** | ||||||
| hg19:Y:7019210-A-C hg38:Y:7151169-A-C | ** | ||||||
| hg19:Y:7093668-C-A hg38:Y:7225627-C-A | ** | ||||||
| hg19:Y:7109478-G-A hg38:Y:7241437-G-A | ** | ||||||
| hg19:Y:7132729-A-T hg38:Y:7264688-A-T | ** | ||||||
| hg19:Y:7187807-C-A hg38:Y:7319766-C-A | ** | ||||||
| hg19:Y:7214520-T-G hg38:Y:7346479-T-G | ** | ||||||
| hg19:Y:7218052-C-A hg38:Y:7350011-C-A | ** | ||||||
| hg19:Y:7282368-T-A hg38:Y:7414327-T-A | ** | ||||||
| hg19:Y:7308685-T-C hg38:Y:7440644-T-C | ** | ||||||
| hg19:Y:7311308-T-A hg38:Y:7443267-T-A | ** | ||||||
| hg19:Y:7311317-A-C hg38:Y:7443276-A-C | ** | ||||||
| hg19:Y:7311591-C-A hg38:Y:7443550-C-A | ** | ||||||
| hg19:Y:7428161-A-C hg38:Y:7560120-A-C | ** | ||||||
| hg19:Y:7474497-T-C hg38:Y:7606456-T-C | IR1_L | ** | |||||
| hg19:Y:7717879-A-G hg38:Y:7849838-A-G | Y138631 | ** | |||||
| hg19:Y:7756721-C-A hg38:Y:7888680-C-A | ** | ||||||
| hg19:Y:7775021-A-T hg38:Y:7906980-A-T | ** | ||||||
| hg19:Y:7866892-G-T hg38:Y:7998851-G-T | ** | ||||||
| hg19:Y:7866905-C-A hg38:Y:7998864-C-A | ** | ||||||
| hg19:Y:7866909-G-T hg38:Y:7998868-G-T | ** | ||||||
| hg19:Y:7996147-T-G hg38:Y:8128106-T-G | ** | ||||||
| hg19:Y:8072218-A-C hg38:Y:8204177-A-C | ** | ||||||
| hg19:Y:8100593-G-C hg38:Y:8232552-G-C | ** | ||||||
| hg19:Y:8117447-C-A hg38:Y:8249406-C-A | ** | ||||||
| hg19:Y:8341828-T-A hg38:Y:8473787-T-A | ** | ||||||
| hg19:Y:8343866-A-T hg38:Y:8475825-A-T | ** | ||||||
| hg19:Y:8369549-A-C hg38:Y:8501508-A-C | ** | ||||||
| hg19:Y:8384663-G-A hg38:Y:8516622-G-A | BY72198 | ** | |||||
| hg19:Y:8679424-C-A hg38:Y:8811383-C-A | ** | ||||||
| hg19:Y:8835266-C-A hg38:Y:8967225-C-A | ** | ||||||
| hg38:Y:9120733-C-A | ** | ||||||
| hg19:Y:9040317-T-G hg38:Y:9202708-T-G | ** | ||||||
| hg19:Y:9380219-C-A hg38:Y:9542610-C-A | ** | ||||||
| hg19:Y:9403042-C-A hg38:Y:9565433-C-A | ** | ||||||
| hg19:Y:9806733-T-G hg38:Y:9969124-T-G | ** | ||||||
| hg19:Y:9859043-A-T hg38:Y:10021434-A-T | ** | ||||||
| hg19:Y:9914007-T-A hg38:Y:10076398-T-A | ** | ||||||
| hg19:Y:9932137-C-A hg38:Y:10094528-C-A | ** | ||||||
| hg19:Y:9945863-GAAAAA-G hg38:Y:10108254-GAAAAA-G | 16×A | ** | |||||
| hg19:Y:9953340-T-C hg38:Y:10115731-T-C | ** | ||||||
| hg19:Y:10002408-T-C hg38:Y:10164799-T-C | ** | ||||||
| hg19:Y:10080424-G-T hg38:Y:10242815-G-T | ** | ||||||
| hg38:Y:10666667-G-CA | ** | ||||||
| hg38:Y:10666710-A-G | ** | ||||||
| hg38:Y:10667023-C-CGAATTAATTT | ** | ||||||
| hg38:Y:10667546-T-A | ** | ||||||
| hg38:Y:10667567-T-C | ** | ||||||
| hg38:Y:10677167-C-CCCAAT | ** | ||||||
| hg38:Y:10689536-T-A | ** | ||||||
| hg38:Y:10694012-A-T | ** | ||||||
| hg38:Y:10747002-C-CAATGT | ** | ||||||
| hg38:Y:10747008-C-CTGTCG | ** | ||||||
| hg38:Y:10749887-T-A | ** | ||||||
| hg38:Y:10749890-T-C | ** | ||||||
| hg38:Y:10749918-A-T | ** | ||||||
| hg38:Y:10764549-T-TGTTC | ** | ||||||
| hg38:Y:10764560-C-T | ** | ||||||
| hg38:Y:10764564-C-CCGTAT | ** | ||||||
| hg38:Y:10776508-ATT-A | ** | ||||||
| hg38:Y:10777748-T-G | ** | ||||||
| hg38:Y:10785649-T-G | ** | ||||||
| hg38:Y:10797591-C-A | ** | ||||||
| hg38:Y:10803554-T-G | ** | ||||||
| hg38:Y:10803567-A-C | ** | ||||||
| hg38:Y:10809107-CTGT-C | ** | ||||||
| hg38:Y:10809139-A-G | ** | ||||||
| hg38:Y:10809143-C-A | ** | ||||||
| hg38:Y:10828573-T-A | ** | ||||||
| hg38:Y:10828578-C-G | ** | ||||||
| hg38:Y:10845668-T-TTCCTC | ** | ||||||
| hg38:Y:10856441-C-A | ** | ||||||
| hg38:Y:10880112-C-A | ** | ||||||
| hg38:Y:10880932-C-T | FT435312 | ** | |||||
| hg38:Y:10895299-C-A | ** | ||||||
| hg38:Y:10910927-G-T | ** | ||||||
| hg38:Y:10916026-G-C | ** | ||||||
| hg38:Y:10922307-T-C | ** | ||||||
| hg38:Y:10938090-C-A | ** | ||||||
| hg38:Y:10939771-C-A | ** | ||||||
| hg38:Y:10939791-C-A | ** | ||||||
| hg38:Y:10945392-A-G | ** | ||||||
| hg38:Y:10945418-C-T | ** | ||||||
| hg38:Y:10950422-C-A | ** | ||||||
| hg38:Y:10961225-C-T | ** | ||||||
| hg38:Y:10961256-C-G | ** | ||||||
| hg38:Y:10961258-T-C | ** | ||||||
| hg38:Y:10961268-CACCAG-C | ** | ||||||
| hg38:Y:10969916-C-T | ** | ||||||
| hg38:Y:10969976-T-C | ** | ||||||
| hg38:Y:10980543-A-T | ** | ||||||
| hg38:Y:11009133-G-T | ** | ||||||
| hg38:Y:11014490-T-C | ** | ||||||
| hg38:Y:11030712-C-G | ** | ||||||
| hg38:Y:11030733-A-C | ** | ||||||
| hg38:Y:11030957-C-T | ** | ||||||
| hg38:Y:11033247-C-A | ** | ||||||
| hg19:Y:13196412-T-G hg38:Y:11040736-T-G | ** | ||||||
| hg19:Y:13253216-G-T hg38:Y:11097540-G-T | ** | ||||||
| hg19:Y:13254503-C-A hg38:Y:11098827-C-A | ** | ||||||
| hg19:Y:13460651-C-T hg38:Y:11304975-C-T | ** | ||||||
| hg19:Y:13460720-C-A hg38:Y:11305044-C-A | ** | ||||||
| hg19:Y:13485766-G-T hg38:Y:11330090-G-T | ** | ||||||
| hg19:Y:13485775-C-G hg38:Y:11330099-C-G | ** | ||||||
| hg19:Y:13487679-C-T hg38:Y:11332003-C-T | ** | ||||||
| hg19:Y:13545132-C-A hg38:Y:11389456-C-A | ** | ||||||
| hg19:Y:13573419-A-T hg38:Y:11417743-A-T | ** | ||||||
| hg19:Y:13598946-G-A hg38:Y:11443270-G-A | FT446285 | ** | |||||
| hg19:Y:13625153-T-C hg38:Y:11469477-T-C | ** | ||||||
| hg38:Y:11656441-G-T | DYZ17 | ** | |||||
| hg38:Y:11658123-G-C | DYZ17 | ** | |||||
| hg38:Y:11658128-C-G | DYZ17 | ** | |||||
| hg38:Y:11658138-A-T | DYZ17 | ** | |||||
| hg38:Y:11658143-G-A | DYZ17 | ** | |||||
| hg19:Y:13798735-A-C hg38:Y:11678029-A-C | DYZ17 | ** | |||||
| hg19:Y:13857727-T-A hg38:Y:11737021-T-A | DYZ17 | ** | |||||
| hg19:Y:13860655-G-T hg38:Y:11739949-G-T | DYZ17 | ** | |||||
| hg19:Y:13888566-A-T hg38:Y:11767860-A-T | ** | ||||||
| hg19:Y:13929772-C-A hg38:Y:11809066-C-A | ** | ||||||
| hg19:Y:14029054-C-A hg38:Y:11908348-C-A | ** | ||||||
| hg19:Y:14077861-G-A hg38:Y:11957155-G-A | ** | ||||||
| hg19:Y:14079578-A-T hg38:Y:11958872-A-T | ** | ||||||
| hg19:Y:14088965-A-T hg38:Y:11968259-A-T | ** | ||||||
| hg19:Y:14180817-A-G hg38:Y:12060111-A-G | ** | ||||||
| hg19:Y:14196386-T-G hg38:Y:12075680-T-G | ** | ||||||
| hg19:Y:14213188-T-G hg38:Y:12092482-T-G | ** | ||||||
| hg19:Y:14238567-A-T hg38:Y:12117861-A-T | ** | ||||||
| hg19:Y:14241347-C-A hg38:Y:12120641-C-A | ** | ||||||
| hg19:Y:14376331-C-A hg38:Y:12255627-C-A | ** | ||||||
| hg19:Y:14382840-C-A hg38:Y:12262136-C-A | ** | ||||||
| hg19:Y:14454455-T-G hg38:Y:12333728-T-G | ** | ||||||
| hg19:Y:14474666-G-T hg38:Y:12353935-G-T | ** | ||||||
| hg19:Y:14527554-C-A hg38:Y:12415755-C-A | ** | ||||||
| hg19:Y:14550170-G-T hg38:Y:12438371-G-T | ** | ||||||
| hg19:Y:14691858-T-G hg38:Y:12579924-T-G | ** | ||||||
| hg19:Y:14696844-C-A hg38:Y:12584910-C-A | ** | ||||||
| hg19:Y:14698492-A-T hg38:Y:12586558-A-T | ** | ||||||
| hg19:Y:14703431-A-T hg38:Y:12591497-A-T | ** | ||||||
| hg19:Y:14717642-C-G hg38:Y:12605710-C-G | ** | ||||||
| hg19:Y:14721832-A-G hg38:Y:12609900-A-G | ** | ||||||
| hg19:Y:14750229-A-C hg38:Y:12638298-A-C | ** | ||||||
| hg19:Y:14750257-C-A hg38:Y:12638326-C-A | ** | ||||||
| hg19:Y:14762459-C-A hg38:Y:12650528-C-A | ** | ||||||
| hg19:Y:14762464-A-C hg38:Y:12650533-A-C | ** | ||||||
| hg19:Y:14775977-C-A hg38:Y:12664046-C-A | ** | ||||||
| hg19:Y:14784907-C-A hg38:Y:12672977-C-A | ** | ||||||
| hg19:Y:14934824-C-A hg38:Y:12822889-C-A | ** | ||||||
| hg19:Y:14992775-A-T hg38:Y:12880860-A-T | ** | ||||||
| hg19:Y:15127992-T-G hg38:Y:13016079-T-G | ** | ||||||
| hg19:Y:15168779-C-A hg38:Y:13056865-C-A | ** | ||||||
| hg19:Y:15170631-A-T hg38:Y:13058717-A-T | ** | ||||||
| hg19:Y:15219149-T-A hg38:Y:13107235-T-A | ** | ||||||
| hg19:Y:15264662-A-T hg38:Y:13152752-A-T | ** | ||||||
| hg19:Y:15406937-CT-C hg38:Y:13295057-CT-C | ** | ||||||
| hg19:Y:15439168-T-C hg38:Y:13327288-T-C | ** | ||||||
| hg19:Y:15495001-C-A hg38:Y:13383121-C-A | ** | ||||||
| hg19:Y:15566016-C-A hg38:Y:13454136-C-A | ** | ||||||
| hg19:Y:15620271-A-G hg38:Y:13508391-A-G | ** | ||||||
| hg19:Y:15656807-T-C hg38:Y:13544927-T-C | ** | ||||||
| hg19:Y:15677175-C-A hg38:Y:13565295-C-A | ** | ||||||
| hg19:Y:15815393-ATTTCT-A hg38:Y:13703513-ATTTCT-A | ** | ||||||
| hg19:Y:15940181-C-A hg38:Y:13828301-C-A | ** | ||||||
| hg19:Y:15940196-A-T hg38:Y:13828316-A-T | ** | ||||||
| hg19:Y:15995249-A-C hg38:Y:13883369-A-C | ** | ||||||
| hg19:Y:16116610-T-G hg38:Y:14004730-T-G | P8_Prx | ** | |||||
| hg19:Y:16185945-T-A hg38:Y:14074065-T-A | ** | ||||||
| hg19:Y:16199625-A-C hg38:Y:14087745-A-C | ** | ||||||
| hg19:Y:16221401-A-T hg38:Y:14109521-A-T | ** | ||||||
| hg19:Y:16603277-C-A hg38:Y:14491397-C-A | ** | ||||||
| hg19:Y:16620100-A-T hg38:Y:14508220-A-T | ** | ||||||
| hg19:Y:16702829-C-A hg38:Y:14590949-C-A | ** | ||||||
| hg19:Y:16704489-G-C hg38:Y:14592609-G-C | ** | ||||||
| hg19:Y:16743194-GA-G hg38:Y:14631314-GA-G | 9×A | ** | |||||
| hg19:Y:16800761-C-A hg38:Y:14688881-C-A | ** | ||||||
| hg19:Y:17379507-T-G hg38:Y:15267627-T-G | ** | ||||||
| hg19:Y:17455918-T-A hg38:Y:15344038-T-A | ** | ||||||
| hg19:Y:17515437-A-C hg38:Y:15403557-A-C | ** | ||||||
| hg19:Y:17518532-T-C hg38:Y:15406652-T-C | ** | ||||||
| hg19:Y:17536695-A-C hg38:Y:15424815-A-C | ** | ||||||
| hg19:Y:17591940-G-T hg38:Y:15480060-G-T | ** | ||||||
| hg19:Y:17644390-A-T hg38:Y:15532510-A-T | ** | ||||||
| hg19:Y:17644396-T-A hg38:Y:15532516-T-A | ** | ||||||
| hg19:Y:17714061-C-A hg38:Y:15602181-C-A | ** | ||||||
| hg19:Y:17859635-C-A hg38:Y:15747755-C-A | ** | ||||||
| hg19:Y:17961103-C-A hg38:Y:15849223-C-A | ** | ||||||
| hg19:Y:18017094-C-A hg38:Y:15905214-C-A | ** | ||||||
| hg19:Y:18067196-A-T hg38:Y:15955316-A-T | ** | ||||||
| hg19:Y:18159778-C-A hg38:Y:16047898-C-A | ** | ||||||
| hg19:Y:18188142-G-T hg38:Y:16076262-G-T | ** | ||||||
| hg19:Y:18411124-C-T hg38:Y:16299244-C-T | FGC49444 | P6_Gap | ** | ||||
| hg19:Y:18736013-G-T hg38:Y:16624133-G-T | ** | ||||||
| hg19:Y:18748837-T-C hg38:Y:16636957-T-C | ** | ||||||
| hg19:Y:18759042-C-T hg38:Y:16647162-C-T | ** | ||||||
| hg19:Y:18849405-A-C hg38:Y:16737525-A-C | ** | ||||||
| hg19:Y:18892240-T-A hg38:Y:16780360-T-A | ** | ||||||
| hg19:Y:19044473-C-A hg38:Y:16932593-C-A | ** | ||||||
| hg19:Y:19045005-G-A hg38:Y:16933125-G-A | ** | ||||||
| hg19:Y:19130609-G-A hg38:Y:17018729-G-A | Y138654 | ** | |||||
| hg19:Y:19233949-A-T hg38:Y:17122069-A-T | ** | ||||||
| hg19:Y:19244650-T-A hg38:Y:17132770-T-A | ** | ||||||
| hg19:Y:19246947-G-A hg38:Y:17135067-G-A | ** | ||||||
| hg19:Y:19259654-G-T hg38:Y:17147774-G-T | ** | ||||||
| hg19:Y:19377445-A-AGAAC hg38:Y:17265565-A-AGAAC | ** | ||||||
| hg19:Y:19422867-T-A hg38:Y:17310987-T-A | ** | ||||||
| hg19:Y:19563029-T-G hg38:Y:17451149-T-G | ** | ||||||
| hg19:Y:19663395-T-A hg38:Y:17551515-T-A | P5_Prx | ** | |||||
| hg19:Y:19706435-C-G hg38:Y:17594555-C-G | P5_Prx | ** | |||||
| hg19:Y:19937431-A-C hg38:Y:17825551-A-C | P5_Prx | ** | |||||
| hg19:Y:20458507-G-T hg38:Y:18296621-G-T | P5_Dst | ** | |||||
| hg19:Y:21021634-T-TG hg38:Y:18859748-T-TG | P4_Dst | ** | |||||
| hg19:Y:21021689-C-A hg38:Y:18859803-C-A | P4_Dst | ** | |||||
| hg19:Y:21077624-A-T hg38:Y:18915738-A-T | ** | ||||||
| hg19:Y:21208720-G-T hg38:Y:19046834-G-T | ** | ||||||
| hg19:Y:21221277-C-A hg38:Y:19059391-C-A | ** | ||||||
| hg19:Y:21362780-C-A hg38:Y:19200894-C-A | ** | ||||||
| hg19:Y:21464064-G-T hg38:Y:19302178-G-T | ** | ||||||
| hg19:Y:21477811-AAAAGAAAGAAAGAAAGAAAG-A hg38:Y:19315925-AAAAGAAAGAAAGAAAGAAAG-A | 14×AAAG | ** | |||||
| hg19:Y:21762459-T-C hg38:Y:19600573-T-C | ** | ||||||
| hg19:Y:21875792-C-A hg38:Y:19713906-C-A | ** | ||||||
| hg19:Y:21895528-T-A hg38:Y:19733642-T-A | ** | ||||||
| hg19:Y:22027674-A-T hg38:Y:19865788-A-T | ** | ||||||
| hg19:Y:22046887-A-G hg38:Y:19885001-A-G | ** | ||||||
| hg19:Y:22077279-A-C hg38:Y:19915393-A-C | ** | ||||||
| hg19:Y:22102129-C-A hg38:Y:19940243-C-A | ** | ||||||
| hg19:Y:22209004-A-T hg38:Y:20047118-A-T | ** | ||||||
| hg19:Y:22505729-T-C hg38:Y:20343843-T-C | DYZ19 | ** | |||||
| hg19:Y:22564714-C-G hg38:Y:20402828-C-G | ** | ||||||
| hg19:Y:22580227-C-A hg38:Y:20418341-C-A | Y109172 | ** | |||||
| hg19:Y:22639331-C-T hg38:Y:20477445-C-T | FTB83921 | ** | |||||
| hg19:Y:22713105-T-G hg38:Y:20551219-T-G | ** | ||||||
| hg19:Y:22845952-A-T hg38:Y:20684066-A-T | ** | ||||||
| hg19:Y:22951898-T-A hg38:Y:20790012-T-A | ** | ||||||
| hg19:Y:22993429-A-G hg38:Y:20831543-A-G | ** | ||||||
| hg19:Y:23009858-A-T hg38:Y:20847972-A-T | ** | ||||||
| hg19:Y:23029887-G-T hg38:Y:20868001-G-T | ** | ||||||
| hg19:Y:23137116-G-T hg38:Y:20975230-G-T | ** | ||||||
| hg19:Y:23184379-C-A hg38:Y:21022493-C-A | ** | ||||||
| hg19:Y:23274735-A-T hg38:Y:21112849-A-T | ** | ||||||
| hg19:Y:23333881-T-A hg38:Y:21171995-T-A | ** | ||||||
| hg19:Y:23371966-A-C hg38:Y:21210080-A-C | ** | ||||||
| hg19:Y:23392039-A-C hg38:Y:21230153-A-C | ** | ||||||
| hg19:Y:23417319-C-A hg38:Y:21255433-C-A | ** | ||||||
| hg19:Y:23441010-TA-T hg38:Y:21279124-TA-T | ** | ||||||
| hg19:Y:23625353-A-G hg38:Y:21463467-A-G | ** | ||||||
| hg19:Y:23807578-C-CAAAA hg38:Y:21645692-C-CAAAA | 21×A | ** | |||||
| hg19:Y:24458598-A-T hg38:Y:22312451-A-T | ** | ||||||
| hg19:Y:24607734-T-G hg38:Y:22461587-T-G | P3_t2 | ** | |||||
| hg19:Y:24607804-G-T hg38:Y:22461657-G-T | P3_t2 | ** | |||||
| hg19:Y:24889806-G-T hg38:Y:22743659-G-T | g1 | ** | |||||
| hg19:Y:25073337-G-T hg38:Y:22927190-G-T | g1 | ** | |||||
| hg19:Y:25073349-G-T hg38:Y:22927202-G-T | g1 | ** | |||||
| hg19:Y:25073384-C-A hg38:Y:22927237-C-A | g1 | ** | |||||
| hg19:Y:25888761-T-C hg38:Y:23742614-T-C | P1_Y1 | ** | |||||
| hg19:Y:25888805-G-C hg38:Y:23742658-G-C | P1_Y1 | ** | |||||
| hg19:Y:25888818-CTTTG-C hg38:Y:23742671-CTTTG-C | P1_Y1 | ** | |||||
| hg19:Y:26124384-C-A hg38:Y:23978237-C-A | P1_Y1 | ** | |||||
| hg19:Y:26275952-G-T hg38:Y:24129805-G-T | P1_Y1 | ** | |||||
| hg19:Y:26314199-A-T hg38:Y:24168052-A-T | P1_Y1 | ** | |||||
| hg19:Y:26314204-C-T hg38:Y:24168057-C-T | P1_Y1 | ** | |||||
| hg19:Y:26314272-A-T hg38:Y:24168125-A-T | P1_Y1 | ** | |||||
| hg19:Y:26463027-T-G hg38:Y:24316880-T-G | P1_Y1 | ** | |||||
| hg19:Y:27022168-G-T hg38:Y:24876021-G-T | P1_r4 | ** | |||||
| hg19:Y:28067591-T-A hg38:Y:25921444-T-A | P1_Y2 | ** | |||||
| hg19:Y:28441668-A-C hg38:Y:26295521-A-C | P1_gr2 | ** | |||||
| hg19:Y:28463868-T-G hg38:Y:26317721-T-G | ** | ||||||
| hg19:Y:28515300-T-C hg38:Y:26369153-T-C | ** | ||||||
| hg19:Y:28622329-C-A hg38:Y:26476182-C-A | ** | ||||||
| hg19:Y:28653275-G-C hg38:Y:26507128-G-C | ** | ||||||
| hg19:Y:28781361-T-G hg38:Y:26635214-T-G | ** | ||||||
| hg19:Y:28816044-T-G hg38:Y:26669897-T-G | ** | ||||||
| hg38:Y2:14327-C-T | ** | ||||||
| hg19:Y:18775550-C-A hg38:Y:16663670-C-A | BY123808 | *** | |||||
| hg19:Y:9028893-TAA-T,TA hg38:Y:9191284-TAA-T,TA | 18×A | *** | |||||
| hg19:Y:17533824-GAAAAA-G hg38:Y:15421944-GAAAAA-G | 21×A | *** | |||||
| hg38:Y:11643728-GG-C | DYZ17 | *** | |||||
| hg19:Y:19402130-C-A hg38:Y:17290250-C-A | *** | ||||||
| hg19:Y:21556308-C-A hg38:Y:19394422-C-A | *** | ||||||
| hg38:Y:11034753-C-A | *** | ||||||
| hg19:Y:7608438-T-C hg38:Y:7740397-T-C | *** | ||||||
| hg19:Y:17564912-GAA-G,GAAA hg38:Y:15453032-GAA-G,GAAA | 16×A | *** | |||||
| hg19:Y:3032889-G-A hg38:Y:3164848-G-A | *** | ||||||
| hg19:Y:3440150-A-G hg38:Y:3572109-A-G | *** | ||||||
| hg19:Y:6699218-C-A hg38:Y:6831177-C-A | *** | ||||||
| hg19:Y:6839731-C-A hg38:Y:6971690-C-A | *** | ||||||
| hg19:Y:6953583-C-A hg38:Y:7085542-C-A | *** | ||||||
| hg19:Y:7146000-C-G hg38:Y:7277959-C-G | *** | ||||||
| hg19:Y:7647791-C-A hg38:Y:7779750-C-A | *** | ||||||
| hg19:Y:8081852-T-C hg38:Y:8213811-T-C | *** | ||||||
| hg19:Y:8108356-CA-C,CAA hg38:Y:8240315-CA-C,CAA | 15×A | *** | |||||
| hg19:Y:8171294-A-G hg38:Y:8303253-A-G | *** | ||||||
| hg19:Y:8751528-T-C hg38:Y:8883487-T-C | *** | ||||||
| hg19:Y:9754558-CA-C hg38:Y:9916949-CA-C | *** | ||||||
| hg38:Y:10683317-A-G | *** | ||||||
| hg19:Y:13446603-TC-T hg38:Y:11290927-TC-T | *** | ||||||
| hg19:Y:13600919-TGCATTTGTCTCTTCAAATGC-T hg38:Y:11445243-TGCATTTGTCTCTTCAAATGC-T | *** | ||||||
| hg19:Y:13865538-A-T hg38:Y:11744832-A-T | DYZ17 | *** | |||||
| hg19:Y:14395328-C-A hg38:Y:12274624-C-A | *** | ||||||
| hg19:Y:14933453-CT-C hg38:Y:12821518-CT-C | *** | ||||||
| hg19:Y:15484102-C-A hg38:Y:13372222-C-A | *** | ||||||
| hg19:Y:15557469-T-TAA hg38:Y:13445589-T-TAA | 10×A | *** | |||||
| hg19:Y:16824919-C-A hg38:Y:14713039-C-A | *** | ||||||
| hg19:Y:17238319-C-A hg38:Y:15126439-C-A | *** | ||||||
| hg19:Y:17591651-C-A hg38:Y:15479771-C-A | *** | ||||||
| hg19:Y:17755309-C-A hg38:Y:15643429-C-A | *** | ||||||
| hg19:Y:18625681-T-C hg38:Y:16513801-T-C | *** | ||||||
| hg19:Y:19161258-C-A hg38:Y:17049378-C-A | *** | ||||||
| hg19:Y:21066326-C-T hg38:Y:18904440-C-T | *** | ||||||
| hg19:Y:21251052-C-A hg38:Y:19089166-C-A | *** | ||||||
| hg19:Y:21756753-A-G hg38:Y:19594867-A-G | *** | ||||||
| hg19:Y:22201998-GA-G hg38:Y:20040112-GA-G | *** | ||||||
| hg19:Y:22269740-T-C hg38:Y:20107854-T-C | DYZ19 | *** | |||||
| hg19:Y:22747613-T-C hg38:Y:20585727-T-C | *** | ||||||
| hg19:Y:23123085-C-A hg38:Y:20961199-C-A | *** | ||||||
| hg19:Y:23536958-G-T hg38:Y:21375072-G-T | *** | ||||||
| hg19:Y:23801803-C-A hg38:Y:21639917-C-A | *** | ||||||
| hg19:Y:23804627-TTTATA-T hg38:Y:21642741-TTTATA-T | *** | ||||||
| hg19:Y:24415979-C-A hg38:Y:22269832-C-A | *** | ||||||
| hg19:Y:24518666-G-T hg38:Y:22372519-G-T | *** | ||||||
| hg19:Y:26415598-A-C hg38:Y:24269451-A-C | P1_Y1 | *** | |||||
| hg38:Y2:32997-T-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 342938 | 9057435 | 7467168 | 7404158 |
| Used in age calculations | 9057435 | 7467168 | 7404158 |
| Counts of SNPs | 18 | 18 |
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